View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8821_high_7 (Length: 311)
Name: NF8821_high_7
Description: NF8821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8821_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 38046443 - 38046743
Alignment:
| Q |
1 |
tgattgattgaatttactatttaggactcgtacgaggacatgataaaataaggacaaatagattaagagagttggataagaattaaagaggatatatatg |
100 |
Q |
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| T |
38046443 |
tgattgattgaatttactatttaggactcgtacgacgacatgataaaataaggacaaatagattaagagagttggataagaattaaagaggatatatatg |
38046542 |
T |
|
| Q |
101 |
agtctgataagttcttatatttttaaatgtgctgtatcttaggcagtccactgtatagtattgtgtgttatatcacgtgtttgagtgattaagagatgga |
200 |
Q |
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| T |
38046543 |
agtctgataagttcttatatttttaaatgtgctgtatcttaggcagtccactgtatagtattgtgtgttatatcacgtgtttgagtgattaagagatgga |
38046642 |
T |
|
| Q |
201 |
ggatgatagtgatgaagggtgcagggtggcagcgatgatgatggagagtgttgggtggcaatggtgaaaggtggtcagtgacggcagtcatggagtgatg |
300 |
Q |
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| T |
38046643 |
ggatgatagtgatgaagggtgcagggtggcagcgatgatgatggagagtgttgggtggcaatggtgaaaggtggtcagtgacggcagtcatggagtgatg |
38046742 |
T |
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| Q |
301 |
t |
301 |
Q |
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| T |
38046743 |
t |
38046743 |
T |
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