View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8821_low_12 (Length: 285)

Name: NF8821_low_12
Description: NF8821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8821_low_12
NF8821_low_12
[»] chr4 (17 HSPs)
chr4 (1-181)||(19429571-19429751)
chr4 (169-276)||(19429763-19429870)
chr4 (159-254)||(3639099-3639194)
chr4 (3-78)||(4663781-4663856)
chr4 (5-79)||(3249801-3249875)
chr4 (190-263)||(1017103-1017176)
chr4 (52-108)||(4684243-4684299)
chr4 (171-266)||(28615391-28615485)
chr4 (1-91)||(46019709-46019799)
chr4 (153-267)||(22239470-22239584)
chr4 (209-263)||(46860012-46860066)
chr4 (153-266)||(7730638-7730750)
chr4 (169-254)||(21157822-21157907)
chr4 (198-243)||(51555712-51555757)
chr4 (169-222)||(56249578-56249631)
chr4 (178-222)||(13126538-13126582)
chr4 (198-266)||(25717676-25717744)
[»] chr3 (17 HSPs)
chr3 (153-267)||(21872213-21872327)
chr3 (172-268)||(24624267-24624363)
chr3 (1-58)||(3015932-3015988)
chr3 (11-79)||(16790181-16790249)
chr3 (4-100)||(54775016-54775112)
chr3 (138-178)||(21131537-21131577)
chr3 (190-266)||(25459549-25459625)
chr3 (8-82)||(27888693-27888768)
chr3 (208-266)||(26603286-26603344)
chr3 (115-176)||(52323929-52323990)
chr3 (6-109)||(905058-905161)
chr3 (51-87)||(21862309-21862345)
chr3 (153-181)||(24158531-24158559)
chr3 (5-41)||(32069097-32069133)
chr3 (1-64)||(38462205-38462268)
chr3 (198-266)||(45590734-45590802)
chr3 (113-170)||(49586975-49587034)
[»] scaffold0590 (1 HSPs)
scaffold0590 (3-103)||(1159-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (3-103)||(2716-2816)
[»] chr8 (22 HSPs)
chr8 (4-101)||(34563137-34563234)
chr8 (204-266)||(37353091-37353153)
chr8 (1-100)||(39392744-39392843)
chr8 (198-265)||(4560585-4560652)
chr8 (190-260)||(2364385-2364455)
chr8 (153-266)||(10488501-10488614)
chr8 (198-243)||(13652299-13652344)
chr8 (198-243)||(13710942-13710987)
chr8 (154-266)||(4763933-4764045)
chr8 (153-268)||(34770906-34771021)
chr8 (9-114)||(4558672-4558777)
chr8 (5-101)||(787193-787289)
chr8 (191-268)||(2487925-2488002)
chr8 (22-87)||(31884495-31884559)
chr8 (188-253)||(31884872-31884937)
chr8 (154-243)||(31915235-31915324)
chr8 (1-41)||(40728501-40728542)
chr8 (44-76)||(10488404-10488436)
chr8 (44-92)||(12972752-12972800)
chr8 (5-92)||(29699150-29699237)
chr8 (204-256)||(39881650-39881702)
chr8 (188-256)||(43208085-43208153)
[»] chr2 (22 HSPs)
chr2 (158-264)||(28803451-28803557)
chr2 (46-109)||(11393494-11393557)
chr2 (46-109)||(11410155-11410218)
chr2 (169-266)||(18884921-18885018)
chr2 (5-101)||(31461325-31461421)
chr2 (172-265)||(43456627-43456720)
chr2 (44-92)||(17221666-17221714)
chr2 (5-69)||(35809852-35809915)
chr2 (1-80)||(42817459-42817538)
chr2 (5-99)||(35459799-35459893)
chr2 (208-266)||(7103392-7103450)
chr2 (1-83)||(29430661-29430742)
chr2 (61-103)||(37474656-37474698)
chr2 (188-254)||(42852633-42852699)
chr2 (208-266)||(43199928-43199986)
chr2 (28-101)||(15200440-15200512)
chr2 (1-103)||(18884766-18884869)
chr2 (1-64)||(10143096-10143159)
chr2 (5-108)||(15171130-15171233)
chr2 (225-265)||(31558833-31558873)
chr2 (1-92)||(33576677-33576768)
chr2 (5-92)||(38239638-38239725)
[»] chr6 (17 HSPs)
chr6 (1-101)||(32975865-32975965)
chr6 (1-103)||(3155061-3155163)
chr6 (169-232)||(32976032-32976095)
chr6 (153-243)||(27857396-27857486)
chr6 (4-100)||(5328862-5328958)
chr6 (48-93)||(24330013-24330058)
chr6 (6-109)||(21959607-21959710)
chr6 (188-244)||(34538159-34538215)
chr6 (172-247)||(33385586-33385661)
chr6 (1-87)||(34429773-34429859)
chr6 (3-41)||(32513771-32513809)
chr6 (197-254)||(24973958-24974015)
chr6 (136-181)||(32578014-32578059)
chr6 (172-236)||(283152-283216)
chr6 (154-230)||(4248973-4249049)
chr6 (1-104)||(9833180-9833283)
chr6 (1-80)||(31672551-31672630)
[»] chr5 (12 HSPs)
chr5 (2-80)||(6739780-6739858)
chr5 (153-268)||(38047796-38047911)
chr5 (169-266)||(14331421-14331517)
chr5 (11-103)||(26516183-26516275)
chr5 (113-161)||(16380639-16380686)
chr5 (3-82)||(35135747-35135826)
chr5 (6-80)||(20982223-20982297)
chr5 (136-181)||(36774735-36774778)
chr5 (218-266)||(17369306-17369354)
chr5 (153-181)||(30217096-30217124)
chr5 (1-41)||(33234308-33234348)
chr5 (188-256)||(38033956-38034024)
[»] chr1 (15 HSPs)
chr1 (191-266)||(23373232-23373307)
chr1 (1-103)||(23895221-23895323)
chr1 (208-266)||(6292585-6292643)
chr1 (209-266)||(24460320-24460377)
chr1 (131-180)||(26179464-26179513)
chr1 (204-244)||(15581343-15581383)
chr1 (1-55)||(15360827-15360881)
chr1 (44-103)||(29794048-29794107)
chr1 (113-181)||(46499902-46499972)
chr1 (44-103)||(49365914-49365973)
chr1 (1-81)||(4338555-4338636)
chr1 (180-266)||(33723301-33723387)
chr1 (191-264)||(5157148-5157221)
chr1 (61-114)||(29665890-29665943)
chr1 (63-103)||(5090757-5090797)
[»] chr7 (8 HSPs)
chr7 (167-268)||(23214907-23215008)
chr7 (190-267)||(30751594-30751671)
chr7 (210-266)||(29363603-29363659)
chr7 (5-99)||(49060429-49060523)
chr7 (3-80)||(47003995-47004072)
chr7 (5-80)||(1431395-1431470)
chr7 (1-80)||(27481377-27481456)
chr7 (188-244)||(31002822-31002878)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-80)||(27484-27559)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 5e-93; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 19429571 - 19429751
Alignment:
Q  1 acagtttgactttattttatctttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19429571 acagtttgactttattttatctttgtcatcgaaataacttaaaacataaacacttatccgataaacgcttatgctataagtgcttaactaagctatttat 19429670  T
Q  101 ccatacaagcccatttctataatataagataaaatagtcaaattgttttgatataagctatcctggagagcttatggaaat 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19429671 ccatacaagcccatttctataatataagataaaatagtcaaattgttttgatataagctatcctggagagcttatggaaat 19429751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 19429763 - 19429870
Alignment:
Q  169 agcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaacatg 268  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  19429763 agcttatggcaatgtaatgagctgtttttgtaagatcttccaaacaatctcacatgtgcttatgcgagtagataagttcaaataagtcgatccaaacatg 19429862  T
Q  269 atgtccat 276  Q
    ||||||||    
T  19429863 atgtccat 19429870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 3639194 - 3639099
Alignment:
Q  159 tatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataag 254  Q
    |||| |||||||||||||||  ||| || |||||||| ||| || ||||||||| ||||||||| ||||||||||  ||||||||| || ||||||    
T  3639194 tatcttggagagcttatggacttgtcataagctgtttctatcagctcttccaaataatctcacaggtgcttatgtcggtagataagctcaaataag 3639099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 4663781 - 4663856
Alignment:
Q  3 agtttgactttattttat-ctttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctata 78  Q
    |||||| ||| ||||||| |||||| |||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  4663781 agtttggcttcattttattctttgttatagaaataacttata-cataagcacttatacgataaacgcatatgctata 4663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 3249801 - 3249875
Alignment:
Q  5 tttgactttattttatctttg-tcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataa 79  Q
    ||||||||||||| ||||||  |||||||||||||||| | |||| ||||||||| ||||| ||||||||||||||    
T  3249801 tttgactttatttcatcttttatcatagaaataacttaca-catacacacttatatgataagcgcttatgctataa 3249875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 1017103 - 1017176
Alignment:
Q  190 ctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaa 263  Q
    |||||| |||||| ||||||||||| ||||||| ||| |||||| ||||||| || || |||||||| ||||||    
T  1017103 ctgtttctataagttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 4684243 - 4684299
Alignment:
Q  52 acttatacgataaacgcttatgctataagtgcttaactaagctatttatccatacaa 108  Q
    ||||||| ||||||| |||||| || |||||||||| ||||||||||||||| ||||    
T  4684243 acttatatgataaacacttatgatagaagtgcttaattaagctatttatccaaacaa 4684299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 28615391 - 28615485
Alignment:
Q  171 cttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||||| |||||| || ||||||||| ||||| ||| ||||||||||||||| ||| |||||  |||||||||  |  |||||||| |||||||||    
T  28615391 cttatgaaaatgtcattagctgttttcataagttct-ccaaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaaca 28615485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46019709 - 46019799
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaa 91  Q
    |||||||| ||||||||| ||||| ||  |||||||| |||| | ||||||||||||||  || | ||||||| ||||||||||||||||||    
T  46019709 acagtttggctttattttttcttttgttctagaaatagcttaca-cataaacacttatataattatcgcttatactataagtgcttaactaa 46019799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 22239584 - 22239470
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaata 252  Q
    ||||||||||||||||||||||  || || | || |||||||| | ||   |||| |||| | ||||||| |||||| ||| ||||||||||||| ||||    
T  22239584 ataagctatcctggagagcttaaagacatttcataagctgtttatctacactctttcaaatagtctcacaagtgcttgtgtcagtagataagttcgaata 22239485  T
Q  253 agtcgatccaaacat 267  Q
    | || |||| |||||    
T  22239484 attcaatcctaacat 22239470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 46860012 - 46860066
Alignment:
Q  209 caaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaa 263  Q
    |||||| | ||||| |||||||||||| ||||||||||| |||||||| ||||||    
T  46860012 caaacagtttcacaagtgcttatgtgaatagataagttcaaataagtcaatccaa 46860066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 266
Target Start/End: Original strand, 7730638 - 7730750
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaata 252  Q
    |||||||||||||||||||||||||| |||| || || |||||   |||| ||| | ||| | ||||||  ||| |||||| | ||||| || || ||||    
T  7730638 ataagctatcctggagagcttatggacatgtcataagttgtttccttaagctctccaaaatagtctcacgcgtgtttatgtcattagat-agctcaaata 7730736  T
Q  253 agtcgatccaaaca 266  Q
    ||||||||||||||    
T  7730737 agtcgatccaaaca 7730750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 21157822 - 21157907
Alignment:
Q  169 agcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataag 254  Q
    ||||| || |||||| || |||||||| | |||| ||||||||||| ||| ||| |||||||||| ||||||| || || ||||||    
T  21157822 agcttttgtaaatgtcataagctgtttctgtaagctcttccaaacagtcttacaagtgcttatgtcagtagatgagctcaaataag 21157907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 51555757 - 51555712
Alignment:
Q  198 ataagatcttccaaacaatctcacatgtgcttatgtgagtagataa 243  Q
    ||||| ||||| ||||||||||| | ||||||||||||||||||||    
T  51555757 ataagctcttctaaacaatctcataagtgcttatgtgagtagataa 51555712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 56249578 - 56249631
Alignment:
Q  169 agcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcaca 222  Q
    |||||||| |||||| || ||||||||| ||||| | |||||||||||||||||    
T  56249578 agcttatgaaaatgtcataagctgttttgataagttgttccaaacaatctcaca 56249631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 13126582 - 13126538
Alignment:
Q  178 aaatgtaatgagctgtttttataagatcttccaaacaatctcaca 222  Q
    |||||| || ||||||||||||||| ||||||||||| |||||||    
T  13126582 aaatgtcataagctgtttttataagttcttccaaacagtctcaca 13126538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 25717676 - 25717744
Alignment:
Q  198 ataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||| ||||||||||||| ||||| ||||||||||  ||| ||||| || |||||| | |||||||||    
T  25717676 ataagctcttccaaacaatttcacaagtgcttatgtcggtacataagctcaaataagacaatccaaaca 25717744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 21872327 - 21872213
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaata 252  Q
    ||||||||||||||| || ||||||| |||| || |||| |||| | ||| | ||||||||| ||||||| |||||||||| |||||||||| || ||||    
T  21872327 ataagctatcctggaaagtttatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtgcttatgtcagtagataagatcaaata 21872228  T
Q  253 agtcgatccaaacat 267  Q
    |||  ||||||||||    
T  21872227 agttaatccaaacat 21872213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 24624267 - 24624363
Alignment:
Q  172 ttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaacatg 268  Q
    ||||||| |||| || ||||||||| ||||| ||||||||||| ||| ||| ||||| |||||||||||||||||| | |||| | ||||| |||||    
T  24624267 ttatggacatgtcataagctgttttcataagctcttccaaacagtcttacaagtgctaatgtgagtagataagttcaactaagccaatccacacatg 24624363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3015932 - 3015988
Alignment:
Q  1 acagtttgactttattttatctttgtcatagaaataacttaaaacataaacacttata 58  Q
    |||||||||||| ||||||||||||| |||||||||| |||| |||||| ||||||||    
T  3015932 acagtttgacttcattttatctttgttatagaaataa-ttaatacataagcacttata 3015988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  11 tttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataa 79  Q
    |||||||||||||| || |||||||||||||| |  |||| |||||||| ||||||||||||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatat-ataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 54775112 - 54775016
Alignment:
Q  4 gtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttat 100  Q
    |||||||||||||||||| ||||| ||||||||||||| |||| ||| ||||| || ||||| |  |||||||||| ||| |||| |||||| |||||    
T  54775112 gtttgactttattttatcttttgttatagaaataactt-aaacgtaagcacttttatgataatcatttatgctatatgtggttaattaagctgtttat 54775016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 21131577 - 21131537
Alignment:
Q  138 tcaaattgttttgatataagctatcctggagagcttatgga 178  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  21131577 tcaaatggttttgatataagctatcttggagagcttatgga 21131537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 25459625 - 25459549
Alignment:
Q  190 ctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||||| | |||| ||||||||||||||||||| |||||||||  ||| |||||| || ||||| || |||||||||    
T  25459625 ctgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaaca 25459549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 27888693 - 27888768
Alignment:
Q  8 gactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtg 82  Q
    ||||||||||||||||| || ||| ||||| | ||  ||||||| | ||||| |||||||||||||||||||||||    
T  27888693 gactttattttatcttttgttatacaaatagcctattacataaataattatatgataaacgcttatgctataagtg 27888768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 26603286 - 26603344
Alignment:
Q  208 ccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||||||||||||||||||||||||  ||||| ||| ||| ||| |||| |||||||||    
T  26603286 ccaaacaatctcacatgtgcttatgacagtaggtaaattcaaatcagtcaatccaaaca 26603344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 52323990 - 52323929
Alignment:
Q  115 ttctataatataagataaaata--gtcaaattgttttgatataagctatcctggagagcttatg 176  Q
    |||||| ||| |||||||||||  |||||||||||||||||  ||||||| |||||||||||||    
T  52323990 ttctatgataaaagataaaataaggtcaaattgttttgata--agctatcttggagagcttatg 52323929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 905058 - 905161
Alignment:
Q  6 ttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatccat 104  Q
    ||||||||||||||||||| || ||||||||| |||| | | ||| | |||||| |||| | |||||||||| ||| |||||  |||||||||||| ||     
T  905058 ttgactttattttatcttttgttatagaaatagcttata-cttaagcgcttatatgatataggcttatgctaaaagcgcttacttaagctatttatgcaa 905156  T
Q  105 acaag 109  Q
    |||||    
T  905157 acaag 905161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 21862309 - 21862345
Alignment:
Q  51 cacttatacgataaacgcttatgctataagtgcttaa 87  Q
    |||||||| |||||||| |||||||||||||||||||    
T  21862309 cacttataagataaacgtttatgctataagtgcttaa 21862345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 24158559 - 24158531
Alignment:
Q  153 ataagctatcctggagagcttatggaaat 181  Q
    |||||||||||||||||||||||||||||    
T  24158559 ataagctatcctggagagcttatggaaat 24158531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 32069133 - 32069097
Alignment:
Q  5 tttgactttattttatctttgtcatagaaataactta 41  Q
    |||||||||||||||||||| | ||||||||||||||    
T  32069133 tttgactttattttatcttttttatagaaataactta 32069097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38462268 - 38462205
Alignment:
Q  1 acagtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataa 64  Q
    ||||||||||||||||||||| ||||  ||||||||| |||| || ||||||||||||| |||||    
T  38462268 acagtttgactttattttatcttttggtatagaaatagcttataa-ataaacacttatatgataa 38462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 45590734 - 45590802
Alignment:
Q  198 ataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||| ||| ||||||| ||||||| |||||||||  ||||||||||||| || ||||| || ||||||    
T  45590734 ataagctctcccaaacagtctcacaagtgcttatgctagtagataagttcaaaaaagtcaattcaaaca 45590802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 49587034 - 49586975
Alignment:
Q  113 atttctataatataagataaaata--gtcaaattgttttgatataagctatcctggagag 170  Q
    |||||||||| | |||||||||||  |||||| |||||| |||||||||||| |||||||    
T  49587034 atttctataacaaaagataaaataaagtcaaactgttttcatataagctatcttggagag 49586975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 1159 - 1259
Alignment:
Q  3 agtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatc 101  Q
    |||||||||||||||||||||| || ||||||||| |||| | ||||| |||||||| |||| ||| ||||||||||||| ||||| |||| | ||||||    
T  1159 agtttgactttattttatcttttgttatagaaatagcttata-cataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatc 1257  T
Q  102 ca 103  Q
    ||    
T  1258 ca 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 2816 - 2716
Alignment:
Q  3 agtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatc 101  Q
    |||||||||||||||||||||| || ||||||||| |||| | ||||| |||||||| |||| ||| ||||||||||||| ||||| |||| | ||||||    
T  2816 agtttgactttattttatcttttgttatagaaatagcttata-cataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatc 2718  T
Q  102 ca 103  Q
    ||    
T  2717 ca 2716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 34563234 - 34563137
Alignment:
Q  4 gtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatc 101  Q
    |||||||||||||||||| ||||||||||||||||||| | | |||| |||||||| |||||| | |||||||||||| | |||| |||| | ||||||    
T  34563234 gtttgactttattttatcctttgtcatagaaataactt-atatataagcacttatatgataaatgtttatgctataagcgtttaattaagttgtttatc 34563137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 37353153 - 37353091
Alignment:
Q  204 tcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||||||||| ||||||| |||||||||| |||||||| ||||  |||||||||||||||||    
T  37353153 tcttccaaacagtctcacaagtgcttatgtcagtagataggttcagataagtcgatccaaaca 37353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39392744 - 39392843
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    |||||||||||||||||||||||| || |||||||||  ||| | ||||  |||||||| ||||| | |||||||||||| ||||||| |||| ||||||    
T  39392744 acagtttgactttattttatcttttgttatagaaatagtttata-catagccacttatatgataagcacttatgctataaatgcttaattaagttattta 39392842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 4560585 - 4560652
Alignment:
Q  198 ataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaac 265  Q
    ||||| |||||||||||| |||||| |||||||||| | |||||||| || |||||||| ||||||||    
T  4560585 ataagttcttccaaacaacctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 2364455 - 2364385
Alignment:
Q  190 ctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatc 260  Q
    ||||||| ||||  ||||||||||| ||||||| || ||||||| || |||||||||| ||||||||||||    
T  2364455 ctgttttcataatctcttccaaacagtctcacaagtacttatgtcagaagataagttcaaataagtcgatc 2364385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 266
Target Start/End: Original strand, 10488501 - 10488614
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaata 252  Q
    |||| ||||||||| ||||||||||  |||  || |||||||| | || | |||||| |||| ||||||||||| |||||| ||| |||||| || ||||    
T  10488501 ataaactatcctggtgagcttatggtcatgccataagctgtttctgtatgctcttccgaacagtctcacatgtgtttatgttagttgataagctcaaata 10488600  T
Q  253 agtcgatccaaaca 266  Q
    || | |||||||||    
T  10488601 agccaatccaaaca 10488614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 13652299 - 13652344
Alignment:
Q  198 ataagatcttccaaacaatctcacatgtgcttatgtgagtagataa 243  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||    
T  13652299 ataagctcttccaaacaacctcacaagtgcttatgtgagtagataa 13652344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 13710942 - 13710987
Alignment:
Q  198 ataagatcttccaaacaatctcacatgtgcttatgtgagtagataa 243  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||    
T  13710942 ataagctcttccaaacaacctcacaagtgcttatgtgagtagataa 13710987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 4763933 - 4764045
Alignment:
Q  154 taagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataa 253  Q
    |||||||||||| |||||||||||| |||| || || |||||| | ||| |||   ||| | ||||| | |||||||||  ||| ||||||||| |||||    
T  4763933 taagctatcctgaagagcttatggacatgtcattagatgttttcaaaagctctcttaaatagtctcataggtgcttatgctagtggataagttcaaataa 4764032  T
Q  254 gtcgatccaaaca 266  Q
    ||| |||||||||    
T  4764033 gtcaatccaaaca 4764045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 34770906 - 34771021
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaata 252  Q
    |||||||||||| ||||| | ||||| |||| || ||||||||| ||| |||||  |||||| | ||||| |||||||||  || ||||||  || ||||    
T  34770906 ataagctatcctagagagttcatggacatgtcataagctgttttcataggatctctcaaacagtttcacaagtgcttatgctagcagataaactcaaata 34771005  T
Q  253 agtcgatccaaacatg 268  Q
    |||| | |||||||||    
T  34771006 agtcaaaccaaacatg 34771021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 4558777 - 4558672
Alignment:
Q  9 actttattttatctttg-tcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatccataca 107  Q
    ||||||||||||||||  | ||||||||| |||| | |||||||||||| |  ||||||| |||||||||||| || ||| |||| | |||||||| |||    
T  4558777 actttattttatcttttattatagaaatagcttata-cataaacacttacataataaacgtttatgctataagcgcgtaattaagttgtttatccaaaca 4558679  T
Q  108 agcccat 114  Q
    || ||||    
T  4558678 agaccat 4558672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 787193 - 787289
Alignment:
Q  5 tttgactttattttatctt-tgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatc 101  Q
    ||||||||||||||||||| ||| |  |||| | ||| |||||||| |||||| | |||||||  ||||||||||||||||||| | || ||||||||    
T  787193 tttgactttattttatcttatgttacggaaacagctt-aaacataagcacttagatgataaacatttatgctataagtgcttaattgagttatttatc 787289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 2488002 - 2487925
Alignment:
Q  191 tgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaacatg 268  Q
    |||||| ||||| ||| ||||||| ||||||| |||||||||| ||||||| |  || |||||| | |||||||||||    
T  2488002 tgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatg 2487925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 31884559 - 31884495
Alignment:
Q  22 tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaa 87  Q
    ||||| |||||||||||||| | ||||  ||||| || ||||| ||||||||||||||||||||||    
T  31884559 tttgttatagaaataacttata-catatgcacttgtatgataagcgcttatgctataagtgcttaa 31884495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 31884937 - 31884872
Alignment:
Q  188 agctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataa 253  Q
    ||||||||||||||| | | ||||||| ||||||| |||||||||  |||||||||| || |||||    
T  31884937 agctgtttttataagttttcccaaacactctcacaagtgcttatgctagtagataagctcaaataa 31884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 31915324 - 31915235
Alignment:
Q  154 taagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataa 243  Q
    |||||||||||||||||||||||||  ||| || || ||||| |||||| | |  |||||| ||||||| ||  |||||||| |||||||    
T  31915324 taagctatcctggagagcttatggacttgtcataagttgtttgtataagctttctcaaacagtctcacaagtatttatgtgaatagataa 31915235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40728501 - 40728542
Alignment:
Q  1 acagtttgactttattttatc-tttgtcatagaaataactta 41  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  40728501 acagtttgactttattttatcttttgttatagaaataactta 40728542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 10488436 - 10488404
Alignment:
Q  44 acataaacacttatacgataaacgcttatgcta 76  Q
    ||||||||||||||| |||||||||||||||||    
T  10488436 acataaacacttatatgataaacgcttatgcta 10488404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 12972800 - 12972752
Alignment:
Q  44 acataaacacttatacgataaacgcttatgctataagtgcttaactaag 92  Q
    |||||| |||||||| |||||| |||||||||||||| |||||| ||||    
T  12972800 acataagcacttatatgataaatgcttatgctataagcgcttaattaag 12972752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 29699237 - 29699150
Alignment:
Q  5 tttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaag 92  Q
    ||||||||||||||||| ||||| |||||||||||||   |||||| || ||||| ||||||   ||||||||||||  ||||||||||    
T  29699237 tttgactttattttatcttttgttatagaaataactt-gtacataagcatttatatgataaatatttatgctataagcacttaactaag 29699150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 39881702 - 39881650
Alignment:
Q  204 tcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtc 256  Q
    ||||||||||||||||||| ||| |||||  | ||||||||||| ||||||||    
T  39881702 tcttccaaacaatctcacaagtgtttatgccaatagataagttcaaataagtc 39881650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 43208153 - 43208085
Alignment:
Q  188 agctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtc 256  Q
    ||||||||||||||| |||| |||||| |||||   |||  ||||| ||||||||||||| ||||||||    
T  43208153 agctgtttttataagctctttcaaacagtctcagtagtgtgtatgtcagtagataagttcaaataagtc 43208085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 28803557 - 28803451
Alignment:
Q  158 ctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcg 257  Q
    ||||||||||||||||||||| |||| || || |||||  ||| | |||  |||||| |||||||||||||||||   ||||||||| || ||||||||     
T  28803557 ctatcctggagagcttatggacatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtca 28803458  T
Q  258 atccaaa 264  Q
    |||||||    
T  28803457 atccaaa 28803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 11393494 - 11393557
Alignment:
Q  46 ataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatccatacaag 109  Q
    |||| |||||||| ||||||| ||| |||||||||||||||| |||||| |||||||| |||||    
T  11393494 ataagcacttatatgataaacacttgtgctataagtgcttaattaagctgtttatccaaacaag 11393557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 11410155 - 11410218
Alignment:
Q  46 ataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatccatacaag 109  Q
    |||| |||||||| ||||||| ||| |||||||||||||||| |||||| |||||||| |||||    
T  11410155 ataagcacttatatgataaacacttgtgctataagtgcttaattaagctgtttatccaaacaag 11410218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 18884921 - 18885018
Alignment:
Q  169 agcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||| |||||||||| || |||||||| |||||| ||| |||||||  || ||| || ||||||| | |||||| | || ||||||||||||||||||    
T  18884921 agctaatggaaatgtcataagctgtttctataagctctcccaaacagccttacaagttcttatgtcaatagatacgctcgaataagtcgatccaaaca 18885018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 31461421 - 31461325
Alignment:
Q  5 tttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatc 101  Q
    ||||||||||||||||| ||||| ||||||||| ||| | | |||| |||||||| |||| ||| |||||||| |||||||||| |||| | ||||||    
T  31461421 tttgactttattttatcttttgttatagaaatagctt-atatataaccacttatatgatatacgtttatgctagaagtgcttaattaagttgtttatc 31461325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 43456720 - 43456627
Alignment:
Q  172 ttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaac 265  Q
    ||||||| |||| ||||| |||||| | ||| |||| |||||| ||| ||| ||| ||||||||||| |||||||| |||||||  ||||||||    
T  43456720 ttatggacatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttatgtgagtaaataagttcaaataagtaaatccaaac 43456627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 17221666 - 17221714
Alignment:
Q  44 acataaacacttatacgataaacgcttatgctataagtgcttaactaag 92  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  17221666 acataaacacttaaatgataaaggcttatgctataagtgcttaattaag 17221714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 35809915 - 35809852
Alignment:
Q  5 tttgactttattttatctttgtcatagaaataacttaaaacataaacacttatacgataaacgct 69  Q
    ||||| ||||||||||||||||||| |||||||||| | |||||| |||||||| ||||| ||||    
T  35809915 tttgattttattttatctttgtcatggaaataactt-atacataagcacttatatgataagcgct 35809852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42817459 - 42817538
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    |||| ||||||| ||||||||||| |  ||||||||||| || || || |||||||||| |||||||||||||||||||||    
T  42817459 acagcttgacttcattttatcttttggtatagaaataacatataa-atcaacacttatatgataaacgcttatgctataag 42817538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 35459893 - 35459799
Alignment:
Q  5 tttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    |||||||||||||||||||| |  ||| ||||| |||| | || || |||||||| ||||||| ||||||||||||| ||| || |||||||||||    
T  35459893 tttgactttattttatcttttggtatacaaatagcttata-caaaatcacttatatgataaacacttatgctataagagctgaattaagctattta 35459799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 7103450 - 7103392
Alignment:
Q  208 ccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||||||||||||||||||| |||| | |||||||  || |||||||| |||||||||    
T  7103450 ccaaacaatctcacatgtgctcatgtcaatagataaactcaaataagtcaatccaaaca 7103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29430742 - 29430661
Alignment:
Q  1 acagtttgactttattttatctttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgc 83  Q
    ||||||||||||||||| |  ||||| ||||||||| ||| | |||||||| ||| || ||||||||||||| ||| ||||||    
T  29430742 acagtttgactttatttaacttttgttatagaaatagctt-atacataaacccttgtatgataaacgcttatactacaagtgc 29430661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 37474698 - 37474656
Alignment:
Q  61 ataaacgcttatgctataagtgcttaactaagctatttatcca 103  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  37474698 ataaacacttaagctataagtgcttaattaagctatttatcca 37474656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 42852699 - 42852633
Alignment:
Q  188 agctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataag 254  Q
    ||||||||| ||| | ||||||||||| ||||||| |||||||||  || |||||||||| ||||||    
T  42852699 agctgttttcataggctcttccaaacagtctcacaagtgcttatgccagcagataagttcaaataag 42852633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 43199928 - 43199986
Alignment:
Q  208 ccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||||| ||||||| |||||||| ||||||||||||||| ||||| |  |||||||||    
T  43199928 ccaaacagtctcacaagtgcttatatgagtagataagttcaaataaatgaatccaaaca 43199986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 15200440 - 15200512
Alignment:
Q  28 atagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatc 101  Q
    ||||||||| ||||| | |||| ||||||||||||||| | ||||||||||| ||||||| |||| | ||||||    
T  15200440 atagaaatagcttaaga-ataagcacttatacgataaatggttatgctataaatgcttaattaagttttttatc 15200512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18884869 - 18884766
Alignment:
Q  1 acagtttgactttattttatctttgtc--atagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattt 98  Q
    ||||||||| |||||||||| ||| |   |||||||||||||| | ||| | |||||||| ||||||  || ||||||||||||||| | |||||| |||    
T  18884869 acagtttgattttattttatattttttttatagaaataacttata-catgagcacttatatgataaaaactaatgctataagtgcttgattaagctgttt 18884771  T
Q  99 atcca 103  Q
    |||||    
T  18884770 atcca 18884766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10143159 - 10143096
Alignment:
Q  1 acagtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataa 64  Q
    |||||||||||| |||||||| ||||| ||||||||||||| | |||||| ||||||| ||||||    
T  10143159 acagtttgacttaattttatcttttgttatagaaataactt-atacataagcacttattcgataa 10143096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 15171233 - 15171130
Alignment:
Q  5 tttgactttattttatctt-tgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatcca 103  Q
    |||||||||| |||||||| ||| ||||||| |||||| | ||||||||||||||  |||   |||||||||||||   ||||| |||| ||||||||||    
T  15171233 tttgactttaatttatcttctgttatagaaaaaacttata-cataaacacttataaaatacgagcttatgctataaacacttaattaagttatttatcca 15171135  T
Q  104 tacaa 108  Q
     ||||    
T  15171134 aacaa 15171130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 31558833 - 31558873
Alignment:
Q  225 tgcttatgtgagtagataagttctaataagtcgatccaaac 265  Q
    |||||||| |||||||||||||| ||||||||||| |||||    
T  31558833 tgcttatgggagtagataagttcaaataagtcgattcaaac 31558873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33576677 - 33576768
Alignment:
Q  1 acagtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaag 92  Q
    |||||||||||||||| |||| ||||| ||||||||||| | | |||||| || ||||  |||| ||||||||  |||||||| |||||||||    
T  33576677 acagtttgactttattgtatcttttgttatagaaataacct-atacataagcatttatgtgatagacgcttatcttataagtgtttaactaag 33576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 38239638 - 38239725
Alignment:
Q  5 tttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaag 92  Q
    |||||||| ||||||||||| || ||||||||| |||| | |||||||||||| | ||| |  |||||||||| |||||||||| ||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttata-cataaacacttacatgatgagtgcttatgctacaagtgcttaattaag 38239725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32975965 - 32975865
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    |||||||||||||||||||| ||| || | |||||||||||| | |||||||||||||| || || ||||||||||||||  |||||| |||| | ||||    
T  32975965 acagtttgactttattttatattttgttacagaaataacttata-cataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgttta 32975867  T
Q  100 tc 101  Q
    ||    
T  32975866 tc 32975865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3155163 - 3155061
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    ||||||||||||| |||||||||| || | ||| ||| |||| | ||||| || ||||| ||||||||||||||||||||| |||||| |||| | ||||    
T  3155163 acagtttgactttgttttatcttttgtaaaagagatagcttata-cataaccatttatatgataaacgcttatgctataagcgcttaaataagttgttta 3155065  T
Q  100 tcca 103  Q
    ||||    
T  3155064 tcca 3155061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 32976032 - 32976095
Alignment:
Q  169 agcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatg 232  Q
    ||||||||||||||| || |||||||| |||||| ||||||||||| ||||||| || ||||||    
T  32976032 agcttatggaaatgtcataagctgtttctataagctcttccaaacagtctcacaagtacttatg 32976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 27857396 - 27857486
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataa 243  Q
    |||||||||| ||||||||||||||| |||| || || |||||| ||||| ||| ||||||| | ||||| |||  ||||| |||||||||    
T  27857396 ataagctatcatggagagcttatggagatgtcataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataa 27857486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 5328958 - 5328862
Alignment:
Q  4 gtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttat 100  Q
    |||||||||||||||||| ||||| ||||||||||||| |||| ||| ||||| || ||||| |  |||||||||| ||| |||| |||||| |||||    
T  5328958 gtttgactttattttatcttttgttatagaaataactt-aaacgtaagcacttttatgataatcatttatgctatatgtggttaattaagctgtttat 5328862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 24330013 - 24330058
Alignment:
Q  48 aaacacttatacgataaacgcttatgctataagtgcttaactaagc 93  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||    
T  24330013 aaacacttatacgataaatgtttatgctataagtgcttaattaagc 24330058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 21959710 - 21959607
Alignment:
Q  6 ttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatccat 104  Q
    ||||||||||||||||||| || || |||||| |||| | | ||| ||||| || |||||| |||||||||| |||||||||  |||||||||||| ||     
T  21959710 ttgactttattttatcttttgttatggaaatagcttata-cttaagcacttctatgataaaggcttatgctaaaagtgcttacgtaagctatttatgcaa 21959612  T
Q  105 acaag 109  Q
    |||||    
T  21959611 acaag 21959607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 34538215 - 34538159
Alignment:
Q  188 agctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataag 244  Q
    |||||||||||||||||||  |||| | ||||||| |||||||| ||||||||||||    
T  34538215 agctgtttttataagatctctcaaatagtctcacaagtgcttatatgagtagataag 34538159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 33385586 - 33385661
Alignment:
Q  172 ttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttc 247  Q
    ||||||| |||| |||||||||||  ||||  ||||||||||| | ||||| |||||||| | |||||||||||||    
T  33385586 ttatggacatgtcatgagctgtttccataaactcttccaaacagtttcacaagtgcttatatcagtagataagttc 33385661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34429773 - 34429859
Alignment:
Q  1 acagtttgactttattttatct-ttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaa 87  Q
    |||||| ||||||||||||||| || | |||||||||||||| | ||||| ||||  ||| |||||| ||||||||||||||| ||||    
T  34429773 acagttagactttattttatctcttattatagaaataacttata-cataatcactagtacaataaacacttatgctataagtgattaa 34429859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 32513809 - 32513771
Alignment:
Q  3 agtttgactttattttatctttgtcatagaaataactta 41  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  32513809 agtttgactttattttatttttgttatagaaataactta 32513771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 24974015 - 24973958
Alignment:
Q  197 tataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataag 254  Q
    |||||| ||| ||||||||||| ||| |||||||||| || |||||||||| ||||||    
T  24974015 tataagctctaccaaacaatcttacaagtgcttatgtcagcagataagttcaaataag 24973958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 32578059 - 32578014
Alignment:
Q  136 agtcaaattgttttgatataagctatcctggagagcttatggaaat 181  Q
    |||||||||||| | ||||||||||||||| ||||| |||||||||    
T  32578059 agtcaaattgttctcatataagctatcctgaagagcatatggaaat 32578014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 283152 - 283216
Alignment:
Q  172 ttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgag 236  Q
    ||||||| |||| || ||||||||||||| | || |||||||| | ||||| |||||||||||||    
T  283152 ttatggacatgtcataagctgtttttatacgttcctccaaacagtttcacaagtgcttatgtgag 283216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 4248973 - 4249049
Alignment:
Q  154 taagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgctta 230  Q
    |||||||||  |||||||||||||| |||  || || |||||| ||||| ||||| ||||||| ||||| |||||||    
T  4248973 taagctatctcggagagcttatggacatgccataaggtgttttcataagctcttcaaaacaatttcacaagtgctta 4249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9833180 - 9833283
Alignment:
Q  1 acagtttgactttattttatct-ttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    |||||||||||||||||||| | |||| ||||||||| |||| |  | || |||||||| |||||||||||||| |||||   ||||| |||| | ||||    
T  9833180 acagtttgactttattttatttattgtaatagaaatatcttatag-agaagcacttatatgataaacgcttatgttataaacacttaattaagttgttta 9833278  T
Q  100 tccat 104  Q
    |||||    
T  9833279 tccat 9833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31672551 - 31672630
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    |||||||||||||||||||| ||| ||||| ||||||  ||| | ||||||||||| || ||||| |||||| ||||||||    
T  31672551 acagtttgactttattttattttttgtcatggaaatagtttata-cataaacacttgtatgataatcgcttaagctataag 31672630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 6739858 - 6739780
Alignment:
Q  2 cagtttgactttattttatctttgtc-atagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    ||||||||||||||||||||||| |  |||||||| ||||| | ||||||| |||||| |||||||||||||| ||||||    
T  6739858 cagtttgactttattttatctttatttatagaaatgacttata-cataaacgcttatatgataaacgcttatgatataag 6739780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 38047911 - 38047796
Alignment:
Q  153 ataagctatcctggagagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaata 252  Q
    |||||||||||||||||||||||||| |||| || || |||||  ||||| ||| ||||||| || |||| || |||||   ||||||||||||| | ||    
T  38047911 ataagctatcctggagagcttatggacatgtcataagttgtttccataagctctcccaaacagtcacacaagtacttataatagtagataagttcaagta 38047812  T
Q  253 agtcgatccaaacatg 268  Q
    || | ||| |||||||    
T  38047811 agccaatctaaacatg 38047796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 14331421 - 14331517
Alignment:
Q  169 agcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||||||||| |||| || |||||||||  |||| | |||||||||||||||   |||||||||  |||||||||| || |||||||| |||||||||    
T  14331421 agcttatggacatgtcataagctgttttg-taagtttttccaaacaatctcaagagtgcttatgacagtagataagctcaaataagtcaatccaaaca 14331517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 26516275 - 26516183
Alignment:
Q  11 tttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatcca 103  Q
    |||||||||||||| ||  |||||||| |||| | ||||| |||||||| ||||| ||||||||||||||| |||||| |||| | ||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttata-cataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatcca 26516183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 16380686 - 16380639
Alignment:
Q  113 atttctataatataagataaaatagtcaaattgttttgatataagctat 161  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||    
T  16380686 atttctataaca-aagataaaatagtcaaattggtttgatataagctat 16380639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 35135747 - 35135826
Alignment:
Q  3 agtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtg 82  Q
    ||||||||||||||||||| ||||| ||||||||| ||| | ||||||||||||||| | ||| | |||||||||| ||||    
T  35135747 agtttgactttattttatcttttgttatagaaatatctt-atacataaacacttatatgttaagcacttatgctatgagtg 35135826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 20982223 - 20982297
Alignment:
Q  6 ttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    |||||||||||||||| ||||| ||||||||| |||| | ||||| |||||||| ||||| | |||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttata-cataagcacttatatgataagcacttatgctataag 20982297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 36774778 - 36774735
Alignment:
Q  136 agtcaaattgttttgatataagctatcctggagagcttatggaaat 181  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||||    
T  36774778 agtcaaactgtttt--tataagctatcctggagagcttatggaaat 36774735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 17369306 - 17369354
Alignment:
Q  218 tcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||| ||| |||||| ||||||||||||| |||||||| |||||||||    
T  17369306 tcacaagtgattatgtcagtagataagttcaaataagtcaatccaaaca 17369354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 30217096 - 30217124
Alignment:
Q  153 ataagctatcctggagagcttatggaaat 181  Q
    |||||||||||||||||||||||||||||    
T  30217096 ataagctatcctggagagcttatggaaat 30217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33234348 - 33234308
Alignment:
Q  1 acagtttgactttattttatctttgtcatagaaataactta 41  Q
    |||||||||||| ||||||| |||||| |||||||||||||    
T  33234348 acagtttgacttcattttatatttgtcgtagaaataactta 33234308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 38034024 - 38033956
Alignment:
Q  188 agctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtc 256  Q
    ||||||||| ||||  ||||||||||| ||||||| |||||||||  |||||| ||| || ||||||||    
T  38034024 agctgttttaataacttcttccaaacagtctcacaggtgcttatgccagtagaaaagctcaaataagtc 38033956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 23373307 - 23373232
Alignment:
Q  191 tgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||||| |||||||| || ||||||    
T  23373307 tgtttctataagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaattcaaaca 23373232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23895323 - 23895221
Alignment:
Q  1 acagtttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    ||||||||| |||||||||||||| || ||||||||| |||| | |||||  ||||||| |||||  ||||||||| ||||||||||| |||| |||| |    
T  23895323 acagtttgaatttattttatcttttgttatagaaatagcttata-cataataacttatatgataagggcttatgctttaagtgcttaattaagttattca 23895225  T
Q  100 tcca 103  Q
    ||||    
T  23895224 tcca 23895221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 6292585 - 6292643
Alignment:
Q  208 ccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||||||||||| | |||||||||| |||||||||| || |||||||| |||||||||    
T  6292585 ccaaacaatctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 24460377 - 24460320
Alignment:
Q  209 caaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||||| ||||||| ||||| |||| ||||||||||||| |||||||| |||||||||    
T  24460377 caaacagtctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaaca 24460320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 26179464 - 26179513
Alignment:
Q  131 aaaatagtcaaattgttttgatataagctatcctggagagcttatggaaa 180  Q
    |||| ||| ||||||||||||||||||||||| ||||||| |||||||||    
T  26179464 aaaaaagtaaaattgttttgatataagctatcttggagagtttatggaaa 26179513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 15581343 - 15581383
Alignment:
Q  204 tcttccaaacaatctcacatgtgcttatgtgagtagataag 244  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  15581343 tcttccaaacaatctcacaagtgcttatgtcagtagataag 15581383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15360881 - 15360827
Alignment:
Q  1 acagtttgactttattttatc-tttgtcatagaaataacttaaaacataaacactt 55  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||    
T  15360881 acagtttgactttattttatcttttgttatagaaataac-taatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 29794048 - 29794107
Alignment:
Q  44 acataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatcca 103  Q
    |||||||||| |||| || |||| ||||||||||||| |||||| |||||| ||||||||    
T  29794048 acataaacacatatatgaaaaacacttatgctataagcgcttaattaagctgtttatcca 29794107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 46499972 - 46499902
Alignment:
Q  113 atttctataatataagataaaata--gtcaaattgttttgatataagctatcctggagagcttatggaaat 181  Q
    |||||||||| | |||||||||||  ||||||||||||| || |||||| || ||||||||||||| ||||    
T  46499972 atttctataagaaaagataaaataaagtcaaattgtttttatttaagctttcatggagagcttatgaaaat 46499902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 49365914 - 49365973
Alignment:
Q  44 acataaacacttatacgataaacgcttatgctataagtgcttaactaagctatttatcca 103  Q
    |||||| ||||||||  ||||||| |||||||||||| ||||||||||| | ||||||||    
T  49365914 acataagcacttatattataaacgtttatgctataagcgcttaactaagttgtttatcca 49365973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4338636 - 4338555
Alignment:
Q  1 acagtttgactttattttatctt-tgtcatagaaataacttaaaacataaa-cacttatacgataaacgcttatgctataagt 81  Q
    ||||||||||||||||||||||| |||  |||| ||||||| | ||||||| |||||||| ||||||| ||||| ||||||||    
T  4338636 acagtttgactttattttatcttctgttctagacataactt-atacataaagcacttatatgataaacacttatactataagt 4338555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 33723387 - 33723301
Alignment:
Q  180 atgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    |||| |||||||||||  ||||| | | |||| || ||||||| ||| |||||  ||||||||||||| |||||||| |||||||||    
T  33723387 atgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaaca 33723301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 5157148 - 5157221
Alignment:
Q  191 tgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaa 264  Q
    ||||| |||||| ||| ||||||| | ||||| ||| ||||||  |||||||||||| |||||||| |||||||    
T  5157148 tgtttctataagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaa 5157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 29665890 - 29665943
Alignment:
Q  61 ataaacgcttatgctataagtgcttaactaagctatttatccatacaagcccat 114  Q
    |||| ||||||||||||||||| |||| |||||| |||||||| ||||| ||||    
T  29665890 ataagcgcttatgctataagtgtttaattaagctgtttatccaaacaaggccat 29665943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 5090797 - 5090757
Alignment:
Q  63 aaacgcttatgctataagtgcttaactaagctatttatcca 103  Q
    |||| |||||||| ||||||||||| |||||||||||||||    
T  5090797 aaactcttatgctttaagtgcttaattaagctatttatcca 5090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 23214907 - 23215008
Alignment:
Q  167 agagcttatggaaatgtaatgagctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||||||||||||||| || || |||||| ||||  |||  |||||| ||||| | ||| |||||  |||||||||| || |||||||| |||||||||    
T  23214907 agagcttatggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaaca 23215006  T
Q  267 tg 268  Q
    ||    
T  23215007 tg 23215008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 30751594 - 30751671
Alignment:
Q  190 ctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaacat 267  Q
    |||||| |||||| ||| ||||||| || |||| |||||||||| ||||||||||||  |||||||  ||||||||||    
T  30751594 ctgtttctataagctctcccaaacagtcgcacaagtgcttatgtcagtagataagtttaaataagttaatccaaacat 30751671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 29363603 - 29363659
Alignment:
Q  210 aaacaatctcacatgtgcttatgtgagtagataagttctaataagtcgatccaaaca 266  Q
    ||||| ||||||| |||||||||| ||||||||||||| |||||| | |||||||||    
T  29363603 aaacagtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaaca 29363659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 49060523 - 49060429
Alignment:
Q  5 tttgactttattttatcttt-gtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataagtgcttaactaagctattta 99  Q
    |||||||||||||||| ||| || ||||||||| |||| | |||||| ||||||| ||||| |  |||| |||||||||||||| |||||| ||||    
T  49060523 tttgactttattttattttttgttatagaaatagcttata-cataaatacttatatgataagccattatactataagtgcttaattaagctgttta 49060429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 47004072 - 47003995
Alignment:
Q  3 agtttgactttattttatct-ttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    |||||||||||||||||||| |||| ||||||||| ||| | | ||||||||||||| |||||||  || |||||||||    
T  47004072 agtttgactttattttatctattgttatagaaatagctt-acatataaacacttatatgataaacatttttgctataag 47003995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 1431395 - 1431470
Alignment:
Q  5 tttgactttattttatctttg-tcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    |||||||||||||||| |||  | || ||||||||||| | |||||||||||||| ||||| | |||||||||||||    
T  1431395 tttgactttattttatttttcattatggaaataacttata-cataaacacttatatgataagcacttatgctataag 1431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27481377 - 27481456
Alignment:
Q  1 acagtttgactttattttatc-tttgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    ||||||||||||  ||||||| ||||| ||||||||| |||| | ||||||||||||||  ||||||  ||||||||||||    
T  27481377 acagtttgacttcgttttatcctttgttatagaaatagcttata-cataaacacttatataataaacatttatgctataag 27481456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 31002878 - 31002822
Alignment:
Q  188 agctgtttttataagatcttccaaacaatctcacatgtgcttatgtgagtagataag 244  Q
    ||||||||||||||| || |||||||| |||||||  ||||||||  ||||||||||    
T  31002878 agctgtttttataagctcatccaaacagtctcacaattgcttatgacagtagataag 31002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 27559 - 27484
Alignment:
Q  5 tttgactttattttatctt-tgtcatagaaataacttaaaacataaacacttatacgataaacgcttatgctataag 80  Q
    ||||||||||||||||||| ||| ||||||||||||| | |||||| |||||| | |||||  ||||||||||||||    
T  27559 tttgactttattttatcttctgttatagaaataactt-atacataagcacttacatgataagagcttatgctataag 27484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University