View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8824_high_15 (Length: 219)

Name: NF8824_high_15
Description: NF8824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8824_high_15
NF8824_high_15
[»] chr5 (17 HSPs)
chr5 (1-215)||(8511463-8511677)
chr5 (158-215)||(5002220-5002277)
chr5 (158-215)||(18473486-18473543)
chr5 (146-215)||(29299356-29299425)
chr5 (146-209)||(38394427-38394490)
chr5 (146-216)||(19211279-19211349)
chr5 (161-215)||(36434758-36434812)
chr5 (145-215)||(11931967-11932038)
chr5 (177-212)||(35349496-35349531)
chr5 (161-215)||(22101922-22101976)
chr5 (146-215)||(34297254-34297326)
chr5 (154-203)||(14913198-14913247)
chr5 (171-212)||(33478131-33478172)
chr5 (175-211)||(36286143-36286179)
chr5 (183-212)||(919725-919754)
chr5 (145-209)||(29031122-29031186)
chr5 (161-213)||(38362393-38362445)
[»] chr7 (32 HSPs)
chr7 (158-215)||(30869266-30869323)
chr7 (145-215)||(28677397-28677467)
chr7 (158-215)||(8566161-8566218)
chr7 (158-215)||(36245456-36245513)
chr7 (147-215)||(10462377-10462445)
chr7 (145-215)||(9979880-9979950)
chr7 (158-215)||(11668095-11668152)
chr7 (154-210)||(30823716-30823772)
chr7 (146-209)||(2523856-2523919)
chr7 (160-215)||(4925904-4925959)
chr7 (145-215)||(10007656-10007726)
chr7 (175-216)||(7456498-7456539)
chr7 (146-206)||(13807241-13807301)
chr7 (168-216)||(22618184-22618232)
chr7 (168-214)||(14543289-14543335)
chr7 (161-215)||(43174299-43174353)
chr7 (162-210)||(2610202-2610250)
chr7 (146-202)||(3411425-3411481)
chr7 (158-210)||(29365706-29365758)
chr7 (145-209)||(32811463-32811527)
chr7 (160-215)||(41863661-41863716)
chr7 (161-211)||(48082813-48082863)
chr7 (177-210)||(16861542-16861575)
chr7 (161-210)||(30486665-30486714)
chr7 (177-210)||(39153372-39153405)
chr7 (145-218)||(40142850-40142923)
chr7 (146-215)||(47942917-47942986)
chr7 (146-215)||(47948347-47948416)
chr7 (176-216)||(10674152-10674192)
chr7 (146-210)||(28677316-28677380)
chr7 (146-210)||(32811377-32811441)
chr7 (168-216)||(40234845-40234893)
[»] chr1 (25 HSPs)
chr1 (154-213)||(519915-519974)
chr1 (152-215)||(38738011-38738074)
chr1 (158-215)||(38040356-38040413)
chr1 (146-215)||(34332475-34332544)
chr1 (158-215)||(49944844-49944901)
chr1 (145-213)||(26070822-26070890)
chr1 (158-210)||(50155383-50155435)
chr1 (146-216)||(15699463-15699533)
chr1 (158-215)||(7375549-7375606)
chr1 (158-215)||(24305745-24305802)
chr1 (159-215)||(23923406-23923462)
chr1 (159-215)||(23923562-23923618)
chr1 (145-208)||(29256685-29256748)
chr1 (146-216)||(19998410-19998480)
chr1 (158-215)||(37515170-37515227)
chr1 (155-212)||(44939149-44939206)
chr1 (161-213)||(640536-640587)
chr1 (146-210)||(26924298-26924362)
chr1 (168-216)||(31050271-31050319)
chr1 (180-212)||(38590149-38590181)
chr1 (146-209)||(26924212-26924275)
chr1 (161-218)||(47883977-47884034)
chr1 (178-210)||(25021262-25021294)
chr1 (158-210)||(26760184-26760236)
chr1 (146-218)||(29892207-29892279)
[»] chr6 (11 HSPs)
chr6 (146-215)||(2230429-2230498)
chr6 (160-215)||(33119982-33120037)
chr6 (158-215)||(28630764-28630821)
chr6 (161-215)||(17265801-17265855)
chr6 (161-215)||(30627837-30627891)
chr6 (177-210)||(25538012-25538045)
chr6 (161-213)||(2972178-2972230)
chr6 (160-215)||(8052868-8052924)
chr6 (146-209)||(12999841-12999905)
chr6 (154-218)||(17705939-17706003)
chr6 (158-210)||(27909060-27909112)
[»] chr4 (26 HSPs)
chr4 (146-215)||(48361051-48361120)
chr4 (146-215)||(25477625-25477694)
chr4 (146-218)||(44111822-44111894)
chr4 (158-213)||(41116573-41116628)
chr4 (158-215)||(8347656-8347713)
chr4 (146-215)||(14859704-14859773)
chr4 (158-215)||(30191907-30191964)
chr4 (158-215)||(42169123-42169180)
chr4 (146-210)||(53225729-53225793)
chr4 (146-213)||(33615778-33615845)
chr4 (161-215)||(50121451-50121505)
chr4 (161-210)||(4386150-4386199)
chr4 (157-210)||(21554193-21554246)
chr4 (154-218)||(42670771-42670835)
chr4 (158-210)||(45828500-45828552)
chr4 (143-206)||(16412230-16412293)
chr4 (158-209)||(19150669-19150720)
chr4 (145-216)||(24100757-24100828)
chr4 (161-215)||(23226964-23227018)
chr4 (161-215)||(36132715-36132769)
chr4 (158-200)||(53179618-53179660)
chr4 (158-215)||(9894636-9894693)
chr4 (158-215)||(48195901-48195958)
chr4 (139-212)||(52535943-52536016)
chr4 (168-212)||(31853150-31853194)
chr4 (175-215)||(35429853-35429893)
[»] chr2 (28 HSPs)
chr2 (146-219)||(41153187-41153260)
chr2 (146-214)||(42698145-42698213)
chr2 (146-215)||(43714053-43714122)
chr2 (158-215)||(30758800-30758856)
chr2 (162-215)||(32457293-32457346)
chr2 (161-209)||(5559377-5559425)
chr2 (145-213)||(36881531-36881599)
chr2 (146-215)||(7943519-7943589)
chr2 (146-212)||(9152462-9152528)
chr2 (161-215)||(10204941-10204994)
chr2 (161-215)||(33824364-33824418)
chr2 (145-215)||(39444993-39445063)
chr2 (160-212)||(11030275-11030327)
chr2 (146-210)||(12873722-12873786)
chr2 (160-218)||(35728542-35728600)
chr2 (177-218)||(4410854-4410895)
chr2 (158-215)||(30761389-30761446)
chr2 (158-215)||(38983079-38983136)
chr2 (158-210)||(5109374-5109426)
chr2 (158-210)||(12486077-12486129)
chr2 (161-209)||(12962719-12962767)
chr2 (146-196)||(33273969-33274019)
chr2 (158-215)||(20555269-20555326)
chr2 (161-206)||(29169924-29169969)
chr2 (146-215)||(33274050-33274119)
chr2 (158-215)||(34447583-34447640)
chr2 (146-210)||(9152378-9152442)
chr2 (158-210)||(29988977-29989029)
[»] chr3 (22 HSPs)
chr3 (155-215)||(44518044-44518104)
chr3 (146-212)||(54537442-54537508)
chr3 (146-209)||(21662885-21662948)
chr3 (156-215)||(43448967-43449026)
chr3 (146-216)||(48346529-48346599)
chr3 (158-210)||(19649664-19649716)
chr3 (169-213)||(52864973-52865017)
chr3 (155-210)||(51723386-51723441)
chr3 (158-210)||(12747782-12747834)
chr3 (146-209)||(53441993-53442056)
chr3 (180-210)||(8266266-8266296)
chr3 (161-215)||(23223038-23223091)
chr3 (154-212)||(43343448-43343506)
chr3 (161-210)||(19649593-19649642)
chr3 (180-216)||(2544491-2544527)
chr3 (180-212)||(9236120-9236152)
chr3 (146-210)||(28406466-28406530)
chr3 (180-212)||(32711285-32711317)
chr3 (146-218)||(36985155-36985227)
chr3 (146-218)||(37010594-37010666)
chr3 (176-212)||(44118212-44118248)
chr3 (158-210)||(44518121-44518173)
[»] chr8 (20 HSPs)
chr8 (158-215)||(43332571-43332628)
chr8 (154-218)||(15726836-15726900)
chr8 (154-215)||(8453674-8453735)
chr8 (162-213)||(16448871-16448922)
chr8 (145-215)||(5031462-5031532)
chr8 (146-216)||(35794605-35794675)
chr8 (158-210)||(7693118-7693170)
chr8 (177-215)||(34711111-34711149)
chr8 (177-215)||(42123046-42123084)
chr8 (146-215)||(1223122-1223191)
chr8 (157-217)||(4156390-4156451)
chr8 (154-210)||(10184636-10184692)
chr8 (158-209)||(10839774-10839825)
chr8 (154-209)||(12958783-12958838)
chr8 (177-216)||(43932128-43932167)
chr8 (145-218)||(3236330-3236401)
chr8 (146-212)||(40465237-40465303)
chr8 (182-215)||(30734553-30734586)
chr8 (158-215)||(35149748-35149805)
chr8 (146-202)||(35634998-35635054)
[»] scaffold0110 (2 HSPs)
scaffold0110 (146-216)||(40270-40340)
scaffold0110 (146-210)||(1617-1681)
[»] scaffold0059 (1 HSPs)
scaffold0059 (146-216)||(26665-26735)
[»] scaffold0015 (1 HSPs)
scaffold0015 (168-215)||(17406-17453)
[»] scaffold0767 (1 HSPs)
scaffold0767 (168-215)||(3744-3791)
[»] scaffold0592 (1 HSPs)
scaffold0592 (146-212)||(462-528)
[»] scaffold0236 (1 HSPs)
scaffold0236 (146-215)||(16731-16797)
[»] scaffold0136 (1 HSPs)
scaffold0136 (161-214)||(16543-16596)
[»] scaffold0002 (1 HSPs)
scaffold0002 (177-210)||(423333-423366)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 8511677 - 8511463
Alignment:
Q  1 gataataaacgatcaaacagatcttagataagttttaataccatcttaaaattaaaattgattgtaattcatgtctatagaactcatttataagatgaga 100  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8511677 gataatagacgatcaaacagatcttagataagttttgataccatcttaaaattaaaattgattgtaattcatgtctatagaactcatttataagatgaga 8511578  T
Q  101 gatttctcacacttataaactcattttcattttcaagttatatcttactccccccgatcctatttagaagaaaattttgactttttagattcattgagta 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8511577 gatttctcacacttataaactcattttcattttcatgttatatcttactcccctcgatcctatttagaagaaaattttgactttttagattcattgagta 8511478  T
Q  201 attgatgtatcttgt 215  Q
    ||||| |||||||||    
T  8511477 attgacgtatcttgt 8511463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 5002277 - 5002220
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  5002277 tcctatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgt 5002220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 18473486 - 18473543
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||    
T  18473486 tcctatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgt 18473543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 29299356 - 29299425
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||| |||||||||| ||||    
T  29299356 tactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgt 29299425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 38394427 - 38394490
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||| ||||||||||||| |||||||  ||||||||||||||||||||| ||||| |||||    
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 19211279 - 19211349
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||| ||||  ||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  19211279 tactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatgtatcttgtt 19211349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 36434812 - 36434758
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  36434812 tatttataagaaaaatttaactttttagattcattaagtaattgatgtatcttgt 36434758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 11931967 - 11932038
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaatt-ttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| ||| ||||||||| |||||||   |||||||||||||||||||| |||||| |||||||||||    
T  11931967 ttactccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgt 11932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 35349531 - 35349496
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||||||||||||||||||||||||||||||||    
T  35349531 ttgactttttagattcattgagtaattgatgtatct 35349496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 22101922 - 22101976
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  22101922 tatttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgt 22101976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 34297326 - 34297254
Alignment:
Q  146 tactccccccgatcctatttagaagaaaatt---ttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||||||||||||| || |||| |   ||||||||||||||||||| |||||||||||| ||||||    
T  34297326 tactccctccgatcctatttataaaaaaaataaattgactttttagattcattaagtaattgatgtgtcttgt 34297254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 14913247 - 14913198
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaatt 203  Q
    ||||||||||||| ||||||| ||||| |||||| |||||||||||||||    
T  14913247 ccgatcctatttataagaaaaatttgattttttaaattcattgagtaatt 14913198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 33478131 - 33478172
Alignment:
Q  171 aaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  33478131 aaaaatttgaatttttagattcattgagtaattgatgtatct 33478172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 36286179 - 36286143
Alignment:
Q  175 ttttgactttttagattcattgagtaattgatgtatc 211  Q
    ||||||||||||||||| |||||||||||||||||||    
T  36286179 ttttgactttttagattaattgagtaattgatgtatc 36286143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 919754 - 919725
Alignment:
Q  183 ttttagattcattgagtaattgatgtatct 212  Q
    ||||||||||||||||||||||||||||||    
T  919754 ttttagattcattgagtaattgatgtatct 919725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 29031186 - 29031122
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    |||||||| ||| ||||||||| |||||||  || |||||||||||||||| |  ||||||||||    
T  29031186 ttactccctccggtcctatttataagaaaaagttaactttttagattcattcaacaattgatgta 29031122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 38362393 - 38362445
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    |||||| ||||||||||| |||||||||||| | |||  ||||||||||||||    
T  38362393 tatttataagaaaattttaactttttagattaactgaaaaattgatgtatctt 38362445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 30869323 - 30869266
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30869323 tcctatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgt 30869266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 28677467 - 28677397
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| ||||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||    
T  28677467 ttactccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgt 28677397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 8566218 - 8566161
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  8566218 tcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgt 8566161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 36245513 - 36245456
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  36245513 tcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgt 36245456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 10462377 - 10462445
Alignment:
Q  147 actccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| |||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||||||||    
T  10462377 actccctccgatcttatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgt 10462445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 9979950 - 9979880
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| |||| | |||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  9979950 ttactccctccgaacttatttataagaaaaatttgactttttagatttattgagtaattcatgtatcttgt 9979880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 11668152 - 11668095
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  11668152 tcctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgt 11668095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 30823716 - 30823772
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  30823716 ccgattctatttataagaaaattttgactttttagattcattgagaaattaatgtat 30823772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 2523919 - 2523856
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||| ||| ||||||||| |||||||  ||||||||||||||||||||||||||| |||||    
T  2523919 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 2523856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 4925904 - 4925959
Alignment:
Q  160 ctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  4925904 ctatttataagaaaaatttgactttttagattcattaagtaattgatgtaacttgt 4925959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 10007726 - 10007656
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| ||| ||||||||| |||||||  ||||||||||||||||||||  ||||| |||||||||||    
T  10007726 ttactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgt 10007656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 7456539 - 7456498
Alignment:
Q  175 ttttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  7456539 ttttgactttttagattcattgagtaattaatgtatcttgtt 7456498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 13807241 - 13807301
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgat 206  Q
    ||||||| ||| || |||||| |||||||  ||||||||||||||||||||||||||||||    
T  13807241 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgat 13807301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 22618184 - 22618232
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  22618184 aagaaatttttgattttttagattcattgagtaattaatgtatcttgtt 22618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 14543289 - 14543335
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatcttg 214  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||    
T  14543289 aagaaacttttgattttttagattcattgagtaattaatgtatcttg 14543335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 43174299 - 43174353
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||||||| |||||||||||| ||| | |||||||||||||||||    
T  43174299 tatttataagaaaattttaactttttagattaattaaataattgatgtatcttgt 43174353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 2610202 - 2610250
Alignment:
Q  162 atttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||| ||||||| ||||| |||||| ||||||||||||||||||||||    
T  2610202 atttataagaaaaatttgattttttaaattcattgagtaattgatgtat 2610250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 3411481 - 3411425
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaat 202  Q
    ||||||| ||||||||||||| |||| || ||||||||||||||| |||||| ||||    
T  3411481 tactccctccgatcctatttataagagaaatttgactttttagatacattgaataat 3411425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 29365758 - 29365706
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||| || |||||||  ||||||||||||||||||||||||||| ||||||    
T  29365758 tcctatatataagaaaaaattgactttttagattcattgagtaattaatgtat 29365706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 32811527 - 32811463
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    |||||||| ||| ||||||||| |||||||  || | |||||||||||||| |||||||||||||    
T  32811527 ttactccctccggtcctatttataagaaaaagttaattttttagattcattcagtaattgatgta 32811463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 41863716 - 41863661
Alignment:
Q  160 ctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| |||||||  ||||||||||| |||||||| |||||| |||||||||||    
T  41863716 ctatttataagaaaaaattgactttttaaattcattgtgtaattaatgtatcttgt 41863661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 48082813 - 48082863
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatc 211  Q
    |||||| |||||||  |||||||||||||||||||| |||||| |||||||    
T  48082813 tatttataagaaaaagttgactttttagattcattgtgtaattaatgtatc 48082863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 16861542 - 16861575
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  16861542 ttgactttttagattcattgaataattgatgtat 16861575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 30486714 - 30486665
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||| ||| |||||||||||||||||||| ||||| ||| ||||||||    
T  30486714 tatttataagtaaattttgactttttagatttattgaataaatgatgtat 30486665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 39153405 - 39153372
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtat 210  Q
    |||||||||||| |||||||||||||||||||||    
T  39153405 ttgactttttagcttcattgagtaattgatgtat 39153372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 40142923 - 40142850
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    |||||||| ||| |||||| || |||||||  |||| |||||||||| ||||  ||||| ||||||||||||||    
T  40142923 ttactccctccggtcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatcttgttta 40142850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 47942986 - 47942917
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||| ||| ||| | ||||| |||||| ||||    
T  47942986 tactccctccgttcctatttataagaaatttttgactttttaaatttattaaataattaatgtattttgt 47942917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 47948416 - 47948347
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||| ||| ||| | ||||| |||||| ||||    
T  47948416 tactccctccgttcctatttataagaaatttttgactttttaaatttattaaataattaatgtattttgt 47948347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 10674152 - 10674192
Alignment:
Q  176 tttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||||||||| |||||||| ||||| ||||||||||||    
T  10674152 tttgactttttaggttcattgaataattaatgtatcttgtt 10674192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 28677316 - 28677380
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| ||| ||||||||| ||||||  ||||||||||| |||||||||  ||| ||||||||    
T  28677316 tactccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtat 28677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 32811377 - 32811441
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| |||||||||| || ||||||   || ||||||| |||||||||| ||||||||||||    
T  32811377 tactccctccgatcctatatataagaaacaatttacttttttgattcattgaataattgatgtat 32811441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 40234893 - 40234845
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    |||||| ||||| ||| ||| ||||||||||||||| ||||||||||||    
T  40234893 aagaaatttttgtcttcttaaattcattgagtaattcatgtatcttgtt 40234845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 519974 - 519915
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  519974 ccgatcctatttataagaaaattttaactttttagattcattgagtaattgatgtatctt 519915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 38738074 - 38738011
Alignment:
Q  152 ccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  38738074 ccccggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgt 38738011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 38040413 - 38040356
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  38040413 tcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgt 38040356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 34332475 - 34332544
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| || ||| ||| || ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  34332475 tactccctccaatcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgt 34332544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 49944844 - 49944901
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  49944844 tcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgt 49944901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 26070822 - 26070890
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    |||||||| ||| || |||||| |||  || ||||||||||||||||||||||||||||||||||||||    
T  26070822 ttactccctccggtcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatctt 26070890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 50155435 - 50155383
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  50155435 tcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 50155383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 15699463 - 15699533
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||| ||||  ||| |||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  15699463 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgtt 15699533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 7375606 - 7375549
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  |||||||||||||||||||| |||||| |||||||||||    
T  7375606 tcctatttataagaaaaaattgactttttagattcattgtgtaattaatgtatcttgt 7375549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 24305802 - 24305745
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||||||||||| ||| | |||||| ||| |||||||||||||||||||||||    
T  24305802 tcctatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatcttgt 24305745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 23923406 - 23923462
Alignment:
Q  159 cctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| ||||||| ||||| ||||||||||| |||| |||||||||||||||||    
T  23923406 cctatttataagaaaaatttgaatttttagattcgttgaataattgatgtatcttgt 23923462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 23923562 - 23923618
Alignment:
Q  159 cctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||| |||||| ||||    
T  23923562 cctatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgt 23923618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 29256748 - 29256685
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgt 208  Q
    ||||| || ||| ||||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  29256748 ttacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgt 29256685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 19998410 - 19998480
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||| ||||  ||| |||||| ||||||||||||| ||||||||||||||| || |||||||||    
T  19998410 tactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatatatcttgtt 19998480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 37515227 - 37515170
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| ||||    
T  37515227 tcctatttataagaaaaatttaactttttagattcattaagtaattaatgtatgttgt 37515170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 44939206 - 44939149
Alignment:
Q  155 cgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||| |||||| |||| ||  |||| |||||||||||||||||||||||||||||||    
T  44939206 cgatcatatttataagagaaaattgattttttagattcattgagtaattgatgtatct 44939149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 640536 - 640587
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    |||||| |||||||  ||||||||||||||||| |||||||||||||||||||    
T  640536 tatttataagaaaaaattgactttttagattca-tgagtaattgatgtatctt 640587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 26924362 - 26924298
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| ||| ||||||||| ||||||  ||||||||||| |||||||||| ||| ||||||||    
T  26924362 tactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26924298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 31050271 - 31050319
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    |||||| |||||||||||||||||||||| |||||| |||||| |||||    
T  31050271 aagaaacttttgactttttagattcattgtgtaattaatgtattttgtt 31050319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 38590181 - 38590149
Alignment:
Q  180 actttttagattcattgagtaattgatgtatct 212  Q
    |||||||||||||||||||||||||||||||||    
T  38590181 actttttagattcattgagtaattgatgtatct 38590149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 26924212 - 26924275
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||| ||| ||||||||| |||||||  ||||||||||| ||||||||||| ||| |||||    
T  26924212 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgta 26924275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 47883977 - 47884034
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    |||||| |||||||  ||||||||||| ||| ||| ||||||||||||||||| ||||    
T  47883977 tatttataagaaaaaattgactttttaaattaatttagtaattgatgtatcttattta 47884034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 25021262 - 25021294
Alignment:
Q  178 tgactttttagattcattgagtaattgatgtat 210  Q
    |||||||||||||||||||| ||||||||||||    
T  25021262 tgactttttagattcattgaataattgatgtat 25021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 26760184 - 26760236
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| ||||||  ||||||||||| |||||||||| ||| ||||||||    
T  26760184 tcctatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26760236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 29892279 - 29892207
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||| ||| ||||||||| | ||||   ||||||||||||||||||| | |||||||| ||||| |||||    
T  29892279 tactccctccggtcctatttataggaaacaattgactttttagattcattcaataattgatatatctggttta 29892207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 2230498 - 2230429
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  2230498 tactccctccggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgt 2230429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 33120037 - 33119982
Alignment:
Q  160 ctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  33120037 ctatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgt 33119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 28630764 - 28630821
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| |||||||||||  |||||||||||||||||||||||||||    
T  28630764 tcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgt 28630821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 17265855 - 17265801
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||| ||||| |||||| |||||| ||||||||||||||||||||    
T  17265855 tatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgt 17265801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 30627837 - 30627891
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||| ||||| |||||| ||| |||||||||||||||||||||||    
T  30627837 tatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgt 30627891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 25538012 - 25538045
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||||||||||||||||||||||||||||    
T  25538012 ttgactttttagattcattgagtaattgatgtat 25538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 2972178 - 2972230
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    |||||| |||| || |||||||||||||||| |||||||||||| ||||||||    
T  2972178 tatttataagagaaatttgactttttagatttattgagtaattggtgtatctt 2972230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 8052868 - 8052924
Alignment:
Q  160 ctatttagaagaaaattttgactttttagattcattgagta-attgatgtatcttgt 215  Q
    ||||||| |||||||||||||||||||| || |||||| ||  ||||||||||||||    
T  8052868 ctatttataagaaaattttgactttttaaatgcattgaatattttgatgtatcttgt 8052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 12999905 - 12999841
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgacttttt-agattcattgagtaattgatgta 209  Q
    ||||||| |||||| |||||| ||| |||  |||||||||| ||||||||||||||||| |||||    
T  12999905 tactccctccgatcttatttataagtaaaagttgactttttcagattcattgagtaattaatgta 12999841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 17706003 - 17705939
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    |||||| |||||| |||||||  ||||||||||  ||| |||| || ||||||||||||||||||    
T  17706003 ccgatcttatttataagaaaaaattgactttttgaattgattgcgtgattgatgtatcttgttta 17705939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 27909112 - 27909060
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| ||||||  |||||||||||  ||||||||| ||||||||||||    
T  27909112 tcctatttacaagaaacatttgacttttttaattcattgaataattgatgtat 27909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 48361051 - 48361120
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  48361051 tactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgt 48361120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 25477694 - 25477625
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  25477694 tactccctccgaccatatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgt 25477625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 44111894 - 44111822
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||| ||| || |||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  44111894 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttcttta 44111822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 41116573 - 41116628
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41116573 tcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatctt 41116628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 8347656 - 8347713
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  8347656 tcctatttataagaaaaatttgactttttagattcattgagtgattgatgtattttgt 8347713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 14859704 - 14859773
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||||||| ||||| || |||| |||||  |||||||||||||||| ||||||||||||||||    
T  14859704 tactccctccgatccaatttataataaaaatttgatattttagattcattgagaaattgatgtatcttgt 14859773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 30191907 - 30191964
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  |||| ||||||||||||||||||||||||||||| ||||    
T  30191907 tcctatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgt 30191964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 42169180 - 42169123
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  42169180 tcctatttataagaaaaatttgactttttagatttattgaataattgatgtattttgt 42169123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 53225793 - 53225729
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| ||| ||||||||| |||||||  ||||||||||||||||||||| ||||| ||||||    
T  53225793 tactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtat 53225729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 33615778 - 33615845
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    ||||||| ||| ||||  ||| |||||| |||||| |||||||||||||||||||||| |||||||||    
T  33615778 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatctt 33615845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 50121451 - 50121505
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||| |||||||||||||||| ||||| | |||||||||||||||    
T  50121451 tatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgt 50121505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 4386150 - 4386199
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||| ||||||| |||||||||||| ||||||| ||||||||||||||    
T  4386150 tatttataagaaaaatttgactttttaaattcattaagtaattgatgtat 4386199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 21554246 - 21554193
Alignment:
Q  157 atcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||||||| |||||||  |||| |||||||||||||||||||||| ||||||    
T  21554246 atcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat 21554193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 42670771 - 42670835
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||||||||| |||||||  || ||||||| ||||||||| |||||| |||||||| |||||    
T  42670771 ccgatcctatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgttta 42670835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 45828552 - 45828500
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| |||||||  |||| |||||||||||||||||||||| ||||||    
T  45828552 tcctatttataagaaaaaattgattttttagattcattgagtaattaatgtat 45828500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 16412230 - 16412293
Alignment:
Q  143 tcttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgat 206  Q
    ||||||| || ||| | ||||||| |||||||  ||||||||||||||||||||| ||||||||    
T  16412230 tcttacttcctccggttctatttataagaaaaaattgactttttagattcattgaataattgat 16412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 19150669 - 19150720
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||||| |||||    
T  19150669 tcctatttataagaaaaagttgactttttagatttattgagtaattaatgta 19150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 24100757 - 24100828
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    |||||||| ||||||||  ||| ||||||   || |||||||||||||||||| ||||| ||||||||||||    
T  24100757 ttactccctccgatccttattataagaaataattaactttttagattcattgaataattaatgtatcttgtt 24100828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 23226964 - 23227018
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| |||||||  |||||||||||||||||||  |||||| |||||||||||    
T  23226964 tatttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgt 23227018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 36132769 - 36132715
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| |||||||  ||||||||| |||| ||||||||| ||||||||||||||    
T  36132769 tatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgt 36132715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 53179618 - 53179660
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagta 200  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||    
T  53179618 tcctatttataagaaaactttgaccttttagattcattgagta 53179660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 9894636 - 9894693
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  |||||||||||||||||||  || ||| |||||||||||    
T  9894636 tcctatttataagaaaaagttgactttttagattcattatgttattaatgtatcttgt 9894693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 48195901 - 48195958
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||   | |||||||| ||||||||||||||||| |||||||||    
T  48195901 tcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgt 48195958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 52535943 - 52536016
Alignment:
Q  139 tatatcttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||| |||||||| |||||| |||||| |||||||  || ||||||||||| |||||| ||||  ||||||||    
T  52535943 tatattttactccctccgatcttatttataagaaaaagttaactttttagatacattgaataatgtatgtatct 52536016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 31853194 - 31853150
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||| ||||||||||||| ||||||| |||| ||||||||||    
T  31853194 aagaaaaatttgactttttaggttcattgtgtaagtgatgtatct 31853150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 35429893 - 35429853
Alignment:
Q  175 ttttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||| ||| |||||||| |||||||||||||||||||||||    
T  35429893 tttttactctttagattaattgagtaattgatgtatcttgt 35429853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 41153260 - 41153187
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtttat 219  Q
    ||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| | ||||||    
T  41153260 tactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttat 41153187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 42698213 - 42698145
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttg 214  Q
    ||||||| |||||| |||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  42698213 tactccctccgatcatatttataaaaaaaatttgactttttagattcattgagtaattgatgtatcttg 42698145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 43714122 - 43714053
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||||||| | |||||||||||||||||||||    
T  43714122 tactccctccggtcctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgt 43714053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 30758856 - 30758800
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  30758856 tcctatttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgt 30758800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 32457346 - 32457293
Alignment:
Q  162 atttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgt 32457293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 5559377 - 5559425
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  5559377 tatttataagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 36881531 - 36881599
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    |||||||| ||| | ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||    
T  36881531 ttactccctccggttctatttataagaaaaatttgactttttagatacattgagtaattaatgtatctt 36881599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 7943589 - 7943519
Alignment:
Q  146 tactccccccgatcctatttagaagaaaatt-ttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| |||||||   ||||||||||||||||||||| |||||||||||||||||    
T  7943589 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgt 7943519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 9152528 - 9152462
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||| ||| || |||||| ||||||   ||||||||||||||||||||||||||||||||||||    
T  9152528 tactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatct 9152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 10204941 - 10204994
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10204941 tatttataagaaaatttt-actttttagattcattgagcaattgatgtatcttgt 10204994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 33824364 - 33824418
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  33824364 tatttataagaaaaatttgactttttaaattcattgagtaattgatatatcttgt 33824418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 39444993 - 39445063
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||| ||  |||||| || ||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  39444993 ttactccctcctgtcctatatataagaaaaatttgacttttaagattcattgagtaattgatgtattttgt 39445063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 11030327 - 11030275
Alignment:
Q  160 ctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||| |||||||  || |||||||||||||||||||||||||||||||||    
T  11030327 ctatttataagaaaaaattaactttttagattcattgagtaattgatgtatct 11030275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 12873722 - 12873786
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| |||||||| |||| |||||||  ||||||||||||||||||| ||||||| ||||||    
T  12873722 tactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtat 12873786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 35728600 - 35728542
Alignment:
Q  160 ctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||| || |||| |||| ||||||| ||||||||| ||||||||||||||||||||    
T  35728600 ctatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgttta 35728542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 4410895 - 4410854
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  4410895 ttgactttttagattcattgtgtaattaatgtatcttgttta 4410854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 30761389 - 30761446
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||| || ||||||||    
T  30761389 tcctatttataagaaacatttgactttttacattcattgagtaattaatttatcttgt 30761446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 38983136 - 38983079
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| || ||||  |||| ||||||||||||||| ||||||||||||||||||    
T  38983136 tcctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgt 38983079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 5109374 - 5109426
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| |||||||  || |||||||||||||||||||||||| ||||||    
T  5109374 tcctatttataagaaaaagttaactttttagattcattgagtaattaatgtat 5109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 12486129 - 12486077
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| ||||||   ||||||||||||||||||||| ||||||||||||    
T  12486129 tcctatttacaagaaacaattgactttttagattcattgaataattgatgtat 12486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 12962719 - 12962767
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    |||||| |||||||  ||||||||||||||||||||||||||| |||||    
T  12962719 tatttataagaaaaagttgactttttagattcattgagtaattaatgta 12962767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 33273969 - 33274019
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattg 196  Q
    ||||||| ||||| ||||||| ||||||| ||||||||||| |||||||||    
T  33273969 tactccctccgattctatttataagaaaactttgacttttttgattcattg 33274019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 20555269 - 20555326
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  || | ||||||||| |||||| |||||||||||||||||    
T  20555269 tcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgt 20555326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 29169969 - 29169924
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgat 206  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||||||    
T  29169969 tatttataagaaaaatttgactttttaaatttattgagtaattgat 29169924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 33274119 - 33274050
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||| ||||| || | || ||| |||||||||||||||| |||||||||||||| ||||    
T  33274119 tactccctccggtccaatttataaaagaacttttactttttagattcattaagtaattgatgtatgttgt 33274050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 34447640 - 34447583
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  |||| ||||||||||||||| |||||  |||||||||||    
T  34447640 tcctatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgt 34447583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 9152378 - 9152442
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| ||| ||||||||| ||||||  ||||||||||| || ||||| | ||||||||||||    
T  9152378 tactccctccggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtat 9152442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 29989029 - 29988977
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||||||||||  ||||||||||| |||||||||  ||| ||||||||    
T  29989029 tcctatttagaagaaacatttgacttttttgattcattgcataaatgatgtat 29988977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 44518044 - 44518104
Alignment:
Q  155 cgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  44518044 cgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgt 44518104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 54537442 - 54537508
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    |||||||  |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  54537442 tactcccttcgatcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatct 54537508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 21662885 - 21662948
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||| ||| ||||||||| |||||||  ||||||||||||||||||||||||||| |||||    
T  21662885 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 21662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 43448967 - 43449026
Alignment:
Q  156 gatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||||||||    
T  43448967 gatcctatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgt 43449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 48346599 - 48346529
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||||||||  ||| |||||| |||| |||||||||||||||| ||||||| ||||||||||||    
T  48346599 tactccctccgatccttattataagaaactttttactttttagattcattaagtaattaatgtatcttgtt 48346529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 19649716 - 19649664
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| ||||||  ||||| |||||||||||||||||||||||||||||    
T  19649716 tcctatttacaagaaacatttgattttttagattcattgagtaattgatgtat 19649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 52864973 - 52865017
Alignment:
Q  169 agaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  52864973 agaaaaatttaactttttagattcattgagtaattgatgtatctt 52865017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 51723386 - 51723441
Alignment:
Q  155 cgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||||||||| |||||||  |||| |||||||||||||||||||||| ||||||    
T  51723386 cgatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat 51723441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 12747834 - 12747782
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| |||||||  |||| ||||||||||||| |||||||||||||||    
T  12747834 tcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtat 12747782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 53442056 - 53441993
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||| ||| ||||||||| |||||||  ||||||||||| ||||||||| ||||| |||||    
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgta 53441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 8266266 - 8266296
Alignment:
Q  180 actttttagattcattgagtaattgatgtat 210  Q
    |||||||||||||||||||||||||||||||    
T  8266266 actttttagattcattgagtaattgatgtat 8266296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 23223091 - 23223038
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| |||||||  |||| |||||||||||||||||||| |||||||||||||    
T  23223091 tatttataagaaaaaattga-tttttagattcattgagtaactgatgtatcttgt 23223038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 43343448 - 43343506
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    |||||| |||||| |||||||  ||||||||||||||| |||| |||||| ||||||||    
T  43343448 ccgatcatatttataagaaaaaattgactttttagattaattgcgtaattaatgtatct 43343506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 19649593 - 19649642
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||| ||||||  ||||||||||| |||||||||| ||||||||||||    
T  19649593 tatttacaagaaacatttgacttttttgattcattgaataattgatgtat 19649642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 2544491 - 2544527
Alignment:
Q  180 actttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  2544491 actttttaggttcattgaataattgatgtatcttgtt 2544527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 9236120 - 9236152
Alignment:
Q  180 actttttagattcattgagtaattgatgtatct 212  Q
    ||||||| |||||||||||||||||||||||||    
T  9236120 acttttttgattcattgagtaattgatgtatct 9236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 28406466 - 28406530
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| ||| ||||||||| ||||||   |||||||||||||||| |||| ||||| ||||||    
T  28406466 tactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtat 28406530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 32711317 - 32711285
Alignment:
Q  180 actttttagattcattgagtaattgatgtatct 212  Q
    |||||||||||||||||| ||||||||||||||    
T  32711317 actttttagattcattgaataattgatgtatct 32711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 36985155 - 36985227
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||| ||| ||||||||| |||||||| || | |||| ||||| ||||  ||||| ||||||||||||||    
T  36985155 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgttta 36985227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 37010594 - 37010666
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||| ||| ||||||||| |||||||| || | |||| ||||| ||||  ||||| ||||||||||||||    
T  37010594 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgttta 37010666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 44118212 - 44118248
Alignment:
Q  176 tttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  44118212 tttgactttttagattcattgtgtaaatgatgtatct 44118248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 44518173 - 44518121
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| ||||||| ||||||||||| |||||||||  ||| ||||||||    
T  44518173 tcctatttataagaaaactttgacttttttgattcattgtctaaatgatgtat 44518121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 43332571 - 43332628
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  43332571 tcctatttataagaaaattttgactttttagattcattgagtaattaatatatcttgt 43332628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 15726900 - 15726836
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||||||  |||||||||||    
T  15726900 ccgatcctatttataagaaaaaattgactttttagattcattgagtaattgacttatcttgttta 15726836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 8453735 - 8453674
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||||||||||||| ||||||||    
T  8453735 ccgatcctatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgt 8453674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 16448922 - 16448871
Alignment:
Q  162 atttagaagaaaattttgactttttagattcattgagtaattgatgtatctt 213  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatctt 16448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 5031462 - 5031532
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||| || ||| ||||||||| ||||||| ||| |||||||| ||||||| |||||||||||||||||||    
T  5031462 ttacttcctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgt 5031532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 35794675 - 35794605
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||| ||||  ||| |||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  35794675 tactccctccggtccttattataagaaactttttactttttagattcattgagtaattaatgtatcttgtt 35794605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 7693170 - 7693118
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||    
T  7693170 tcctatttataagaaaaaattgactttttagattcattgagtaattaatgtat 7693118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 34711111 - 34711149
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  34711111 ttgactttttagattcattgagtaattgatgtattttgt 34711149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 42123084 - 42123046
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  42123084 ttgactttttagattcattgagtaattaatgtatcttgt 42123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 1223122 - 1223191
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| || |||||| |||||||   ||||||||||||||||||| |||||| |||||||||||    
T  1223122 tactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgt 1223191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 4156390 - 4156451
Alignment:
Q  157 atcctatttagaagaaaatt-ttgactttttagattcattgagtaattgatgtatcttgttt 217  Q
    |||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||||||    
T  4156390 atcctatttataagaaaaaaattgacttgttagatacattgagtaattgatgtatcttgttt 4156451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 10184692 - 10184636
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    |||||| |||||| |||||||  | ||||||||||||||||||| ||||||||||||    
T  10184692 ccgatcatatttataagaaaaaatcgactttttagattcattgaataattgatgtat 10184636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 10839774 - 10839825
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||||| |||||||  ||||||||||||||||||||| ||||| |||||    
T  10839774 tcctatttataagaaaaaattgactttttagattcattgaataattaatgta 10839825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 12958783 - 12958838
Alignment:
Q  154 ccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgta 209  Q
    ||||||||||||| |||||||  || |||||||||||||||| | |||||||||||    
T  12958783 ccgatcctatttataagaaaaagttaactttttagattcattcaataattgatgta 12958838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 43932167 - 43932128
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  43932167 ttgactttttagattcattgaataattaatgtatcttgtt 43932128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 3236330 - 3236401
Alignment:
Q  145 ttactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgttta 218  Q
    |||||||| |||||| ||||||  | ||||||  ||||||||| ||||||||| |||||||||||||| |||||    
T  3236330 ttactccctccgatcttatttatgaaaaaatt--gactttttaaattcattgaataattgatgtatctagttta 3236401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 40465237 - 40465303
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||| ||||||||||||| |||| ||  |||||||||||||| |||||| ||||  ||||||||    
T  40465237 tactccctccgatcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatct 40465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 30734553 - 30734586
Alignment:
Q  182 tttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||||||||| ||||||||||||||||||    
T  30734553 tttttagattcattgtgtaattgatgtatcttgt 30734586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 35149805 - 35149748
Alignment:
Q  158 tcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||||| |||||||  |||| |||||||||| |||| |||||| |||||||||||    
T  35149805 tcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgt 35149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 35634998 - 35635054
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaat 202  Q
    |||||||  |||||||||||| |  |||| ||||||||||||||||||||| |||||    
T  35634998 tactcccttcgatcctatttatagaaaaagtttgactttttagattcattgggtaat 35635054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 40340 - 40270
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||| ||||  ||| |||||| ||||||||||||||||||||||||||||| || |||||||||    
T  40340 tactccctccggtccttattataagaaacttttgactttttagattcattgagtaattaatatatcttgtt 40270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 1681 - 1617
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||| ||| || |||||| |||||||  || | |||||||||||||||| ||||||||||||    
T  1681 tactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgatgtat 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 26735 - 26665
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgtt 216  Q
    ||||||| ||| ||||  ||| |||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  26735 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgtt 26665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 17406 - 17453
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    |||||| |||||| |||||||||||||||||||||| |||||||||||    
T  17406 aagaaacttttgattttttagattcattgagtaattaatgtatcttgt 17453  T

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Target: scaffold0767 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 3744 - 3791
Alignment:
Q  168 aagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| ||||    
T  3744 aagaaaaatttgactttttacatttattgagtaattgatgtattttgt 3791  T

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Target: scaffold0592 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 528 - 462
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatct 212  Q
    ||||||| ||||||||||||| |||| ||  |||||||||||||| |||||| ||||  ||||||||    
T  528 tactccctccgatcctatttacaagagaaggttgactttttagatacattgaataatgtatgtatct 462  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 16797 - 16731
Alignment:
Q  146 tactccccccgatcctatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttgt 215  Q
    ||||||| ||| ||||||||| ||||||| || ||||||  | |||||||||||||||||||||||||||    
T  16797 tactccctccggtcctatttataagaaaaatt-gacttt--aaattcattgagtaattgatgtatcttgt 16731  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 16543 - 16596
Alignment:
Q  161 tatttagaagaaaattttgactttttagattcattgagtaattgatgtatcttg 214  Q
    |||||| ||||||| ||| |||||||  ||||||||||||||||||| ||||||    
T  16543 tatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttg 16596  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 423366 - 423333
Alignment:
Q  177 ttgactttttagattcattgagtaattgatgtat 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  423366 ttgactttttagattcattgaataattgatgtat 423333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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