View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8830_high_31 (Length: 244)

Name: NF8830_high_31
Description: NF8830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8830_high_31
NF8830_high_31
[»] chr3 (45 HSPs)
chr3 (129-230)||(11883621-11883722)
chr3 (129-230)||(15516439-15516540)
chr3 (130-227)||(38812349-38812446)
chr3 (129-229)||(39654621-39654719)
chr3 (130-227)||(15874873-15874969)
chr3 (153-230)||(12951756-12951833)
chr3 (130-211)||(11330366-11330447)
chr3 (148-220)||(11198945-11199017)
chr3 (148-220)||(14294142-14294214)
chr3 (148-220)||(14299769-14299841)
chr3 (153-220)||(11062414-11062481)
chr3 (160-211)||(12490120-12490171)
chr3 (148-230)||(14522680-14522762)
chr3 (130-208)||(47983627-47983705)
chr3 (130-208)||(47992914-47992992)
chr3 (130-208)||(48002201-48002279)
chr3 (130-208)||(48011487-48011565)
chr3 (148-207)||(40938457-40938516)
chr3 (148-221)||(14297210-14297283)
chr3 (148-221)||(14302837-14302910)
chr3 (130-227)||(33370220-33370317)
chr3 (148-207)||(35122413-35122472)
chr3 (153-211)||(55442152-55442211)
chr3 (173-211)||(48420398-48420436)
chr3 (148-208)||(14060617-14060677)
chr3 (162-206)||(17138194-17138238)
chr3 (131-210)||(5229434-5229513)
chr3 (1-36)||(11883493-11883528)
chr3 (148-207)||(12562851-12562910)
chr3 (138-208)||(9592115-9592185)
chr3 (148-206)||(15574769-15574826)
chr3 (148-221)||(53899894-53899967)
chr3 (148-207)||(17913624-17913683)
chr3 (160-207)||(47786268-47786315)
chr3 (148-206)||(13816240-13816298)
chr3 (148-206)||(15613788-15613845)
chr3 (148-206)||(17099441-17099499)
chr3 (148-206)||(17523782-17523840)
chr3 (148-206)||(19572144-19572202)
chr3 (148-206)||(53769386-53769443)
chr3 (148-206)||(55315121-55315178)
chr3 (148-221)||(8630559-8630632)
chr3 (148-221)||(19230772-19230845)
chr3 (130-211)||(41660341-41660422)
chr3 (148-204)||(13977006-13977061)
[»] chr5 (21 HSPs)
chr5 (129-230)||(5452171-5452272)
chr5 (129-227)||(3672701-3672799)
chr5 (148-211)||(32967550-32967613)
chr5 (130-227)||(21615725-21615822)
chr5 (130-207)||(24226824-24226901)
chr5 (130-210)||(19860963-19861043)
chr5 (148-220)||(23453666-23453738)
chr5 (148-220)||(23465171-23465243)
chr5 (148-211)||(431155-431218)
chr5 (148-211)||(7727303-7727366)
chr5 (160-211)||(23492729-23492780)
chr5 (148-211)||(28888644-28888707)
chr5 (155-210)||(37189510-37189565)
chr5 (148-220)||(19404296-19404368)
chr5 (148-220)||(24184586-24184658)
chr5 (130-211)||(13793859-13793940)
chr5 (148-220)||(11338240-11338311)
chr5 (148-206)||(11582604-11582662)
chr5 (160-194)||(37982144-37982178)
chr5 (148-206)||(9732159-9732216)
chr5 (160-206)||(19498529-19498575)
[»] chr1 (29 HSPs)
chr1 (129-230)||(22836609-22836710)
chr1 (130-227)||(37235318-37235415)
chr1 (148-211)||(38035000-38035063)
chr1 (130-211)||(36357698-36357779)
chr1 (148-228)||(20956344-20956424)
chr1 (153-229)||(51657708-51657784)
chr1 (154-211)||(19601906-19601963)
chr1 (130-227)||(21193879-21193976)
chr1 (162-230)||(27673556-27673624)
chr1 (130-211)||(5471740-5471821)
chr1 (130-227)||(8539309-8539406)
chr1 (130-227)||(8604548-8604645)
chr1 (134-211)||(22144754-22144831)
chr1 (148-221)||(35523799-35523872)
chr1 (130-211)||(13378119-13378200)
chr1 (153-221)||(21716917-21716985)
chr1 (148-206)||(45050409-45050466)
chr1 (148-221)||(35053553-35053626)
chr1 (148-220)||(49966361-49966433)
chr1 (131-210)||(20821684-20821763)
chr1 (148-206)||(5073682-5073739)
chr1 (148-206)||(18506083-18506141)
chr1 (148-206)||(18602425-18602482)
chr1 (148-206)||(20122039-20122096)
chr1 (148-206)||(20826603-20826660)
chr1 (148-206)||(22226707-22226764)
chr1 (148-206)||(22407574-22407632)
chr1 (148-221)||(5675980-5676053)
chr1 (130-210)||(41213022-41213102)
[»] chr2 (29 HSPs)
chr2 (130-230)||(721175-721275)
chr2 (129-211)||(24088733-24088815)
chr2 (130-211)||(23822879-23822960)
chr2 (130-211)||(23831958-23832039)
chr2 (148-211)||(19670518-19670581)
chr2 (148-211)||(23824841-23824904)
chr2 (130-211)||(19434826-19434907)
chr2 (160-211)||(4677-4728)
chr2 (148-211)||(19658673-19658736)
chr2 (148-211)||(24295961-24296024)
chr2 (148-230)||(22787411-22787493)
chr2 (148-221)||(7320201-7320274)
chr2 (148-221)||(24572765-24572838)
chr2 (130-211)||(25304294-25304375)
chr2 (148-230)||(22581307-22581389)
chr2 (130-211)||(43641553-43641634)
chr2 (148-220)||(22691324-22691396)
chr2 (148-220)||(22695971-22696043)
chr2 (148-221)||(269900-269973)
chr2 (148-207)||(25600688-25600747)
chr2 (148-221)||(4449603-4449676)
chr2 (130-211)||(22137183-22137264)
chr2 (148-205)||(27260312-27260369)
chr2 (147-211)||(24276613-24276677)
chr2 (152-220)||(28972755-28972822)
chr2 (148-206)||(12643398-12643455)
chr2 (160-206)||(24827952-24827998)
chr2 (148-206)||(24967025-24967083)
chr2 (160-206)||(36892095-36892141)
[»] chr4 (22 HSPs)
chr4 (131-230)||(15043644-15043743)
chr4 (131-230)||(15110681-15110780)
chr4 (148-230)||(43282760-43282842)
chr4 (148-211)||(15852699-15852762)
chr4 (148-211)||(34197547-34197610)
chr4 (130-211)||(14900202-14900283)
chr4 (148-211)||(37958439-37958502)
chr4 (148-220)||(18495780-18495852)
chr4 (148-211)||(27959754-27959817)
chr4 (148-211)||(41167317-41167380)
chr4 (148-230)||(52266843-52266925)
chr4 (130-227)||(41257710-41257807)
chr4 (148-207)||(44054648-44054707)
chr4 (130-211)||(12245615-12245696)
chr4 (162-230)||(13811017-13811085)
chr4 (130-210)||(47469692-47469772)
chr4 (131-210)||(5372055-5372134)
chr4 (148-206)||(13049537-13049594)
chr4 (148-206)||(15274133-15274190)
chr4 (148-206)||(53706163-53706221)
chr4 (148-206)||(53909143-53909201)
chr4 (148-204)||(30233917-30233973)
[»] chr7 (24 HSPs)
chr7 (130-227)||(9057989-9058086)
chr7 (129-230)||(10862212-10862314)
chr7 (153-210)||(15913821-15913878)
chr7 (148-220)||(11285927-11285999)
chr7 (148-207)||(12753610-12753669)
chr7 (148-230)||(12249489-12249571)
chr7 (148-230)||(49049177-49049259)
chr7 (148-207)||(13273472-13273531)
chr7 (148-211)||(13376396-13376458)
chr7 (162-211)||(13388693-13388742)
chr7 (162-226)||(15629481-15629545)
chr7 (148-206)||(15823786-15823844)
chr7 (148-207)||(2192072-2192131)
chr7 (148-207)||(7291582-7291641)
chr7 (131-210)||(21676390-21676469)
chr7 (148-206)||(2436355-2436412)
chr7 (148-206)||(10988342-10988399)
chr7 (148-206)||(13912489-13912546)
chr7 (148-206)||(16480312-16480369)
chr7 (160-206)||(26010578-26010624)
chr7 (148-206)||(42057539-42057596)
chr7 (148-220)||(45453632-45453705)
chr7 (148-220)||(142343-142415)
chr7 (130-210)||(9322419-9322499)
[»] chr8 (35 HSPs)
chr8 (148-227)||(21199550-21199628)
chr8 (130-227)||(25756665-25756762)
chr8 (153-227)||(25294676-25294750)
chr8 (162-230)||(38532354-38532422)
chr8 (160-227)||(21192135-21192201)
chr8 (148-207)||(17730837-17730896)
chr8 (148-207)||(21696289-21696348)
chr8 (148-211)||(31195661-31195724)
chr8 (148-211)||(39448201-39448264)
chr8 (148-230)||(18768138-18768220)
chr8 (130-208)||(23148622-23148700)
chr8 (130-211)||(37655003-37655084)
chr8 (148-207)||(28543664-28543723)
chr8 (148-230)||(20655396-20655478)
chr8 (130-211)||(23835945-23836026)
chr8 (148-220)||(20568639-20568711)
chr8 (148-220)||(20574832-20574904)
chr8 (148-230)||(22737253-22737336)
chr8 (148-206)||(25121271-25121329)
chr8 (153-211)||(33612440-33612498)
chr8 (148-221)||(20648811-20648884)
chr8 (148-220)||(21679917-21679989)
chr8 (131-210)||(18042918-18042997)
chr8 (148-206)||(24547948-24548005)
chr8 (148-220)||(24718789-24718861)
chr8 (130-210)||(33170991-33171071)
chr8 (147-211)||(45560591-45560655)
chr8 (131-210)||(22312398-22312477)
chr8 (148-207)||(22908856-22908915)
chr8 (148-206)||(16416989-16417047)
chr8 (148-206)||(16675698-16675755)
chr8 (148-206)||(21853268-21853325)
chr8 (148-221)||(37605706-37605779)
chr8 (148-221)||(37610080-37610153)
chr8 (148-220)||(24930487-24930559)
[»] scaffold0090 (1 HSPs)
scaffold0090 (129-229)||(6002-6102)
[»] scaffold0507 (1 HSPs)
scaffold0507 (148-211)||(4731-4794)
[»] scaffold0028 (1 HSPs)
scaffold0028 (148-211)||(78405-78468)
[»] scaffold0080 (1 HSPs)
scaffold0080 (130-227)||(24969-25066)
[»] scaffold0013 (1 HSPs)
scaffold0013 (130-211)||(34198-34279)
[»] scaffold0195 (2 HSPs)
scaffold0195 (148-220)||(8028-8100)
scaffold0195 (148-220)||(13417-13489)
[»] scaffold0243 (1 HSPs)
scaffold0243 (148-211)||(3670-3733)
[»] scaffold0022 (3 HSPs)
scaffold0022 (148-211)||(106300-106363)
scaffold0022 (153-230)||(108356-108433)
scaffold0022 (130-211)||(130615-130696)
[»] chr6 (27 HSPs)
chr6 (148-211)||(16889125-16889188)
chr6 (148-211)||(33323539-33323602)
chr6 (148-211)||(35137329-35137392)
chr6 (148-230)||(15738958-15739040)
chr6 (148-221)||(22866886-22866959)
chr6 (148-207)||(25368731-25368790)
chr6 (130-211)||(22846860-22846941)
chr6 (148-220)||(28196155-28196227)
chr6 (147-211)||(18383060-18383123)
chr6 (148-207)||(16084148-16084207)
chr6 (148-207)||(16105290-16105349)
chr6 (148-206)||(13622487-13622545)
chr6 (148-221)||(18775928-18776001)
chr6 (148-221)||(31627156-31627229)
chr6 (148-220)||(18004346-18004418)
chr6 (130-210)||(34965640-34965720)
chr6 (131-210)||(18104831-18104910)
chr6 (148-206)||(1651324-1651381)
chr6 (148-206)||(14627983-14628040)
chr6 (148-206)||(15736554-15736612)
chr6 (148-206)||(16230314-16230371)
chr6 (148-206)||(18431366-18431424)
chr6 (148-206)||(18569319-18569377)
chr6 (148-206)||(23993894-23993951)
chr6 (148-206)||(26088568-26088625)
chr6 (148-206)||(35017055-35017113)
chr6 (148-220)||(25646200-25646272)
[»] scaffold0031 (2 HSPs)
scaffold0031 (148-230)||(30781-30863)
scaffold0031 (148-207)||(69494-69553)
[»] scaffold0016 (1 HSPs)
scaffold0016 (153-211)||(117985-118043)
[»] scaffold0808 (1 HSPs)
scaffold0808 (162-230)||(2856-2924)
[»] scaffold0610 (1 HSPs)
scaffold0610 (148-220)||(2000-2072)
[»] scaffold0521 (1 HSPs)
scaffold0521 (162-230)||(7303-7371)
[»] scaffold0138 (1 HSPs)
scaffold0138 (148-211)||(23804-23867)
[»] scaffold0095 (1 HSPs)
scaffold0095 (148-211)||(7044-7107)
[»] scaffold0058 (1 HSPs)
scaffold0058 (148-211)||(71658-71721)
[»] scaffold0589 (1 HSPs)
scaffold0589 (160-230)||(6588-6658)
[»] scaffold0327 (1 HSPs)
scaffold0327 (161-211)||(4754-4804)
[»] scaffold0150 (2 HSPs)
scaffold0150 (148-230)||(20404-20486)
scaffold0150 (148-230)||(27233-27315)
[»] scaffold0092 (1 HSPs)
scaffold0092 (160-230)||(2124-2194)
[»] scaffold0021 (1 HSPs)
scaffold0021 (148-230)||(10370-10452)
[»] scaffold0750 (1 HSPs)
scaffold0750 (153-230)||(6715-6792)
[»] scaffold0053 (1 HSPs)
scaffold0053 (130-211)||(78190-78271)
[»] scaffold0190 (1 HSPs)
scaffold0190 (148-220)||(8794-8866)
[»] scaffold0103 (1 HSPs)
scaffold0103 (148-220)||(32298-32370)
[»] scaffold0456 (1 HSPs)
scaffold0456 (148-195)||(12936-12983)
[»] scaffold0346 (1 HSPs)
scaffold0346 (130-211)||(13971-14050)
[»] scaffold0014 (1 HSPs)
scaffold0014 (148-207)||(145657-145718)
[»] scaffold0786 (2 HSPs)
scaffold0786 (130-211)||(416-497)
scaffold0786 (130-211)||(5471-5552)
[»] scaffold0462 (1 HSPs)
scaffold0462 (148-221)||(4844-4917)
[»] scaffold0390 (1 HSPs)
scaffold0390 (130-211)||(4004-4085)
[»] scaffold0004 (2 HSPs)
scaffold0004 (130-211)||(85148-85229)
scaffold0004 (130-208)||(26289-26367)
[»] scaffold0434 (1 HSPs)
scaffold0434 (148-207)||(3388-3447)
[»] scaffold0001 (1 HSPs)
scaffold0001 (148-207)||(71826-71885)
[»] scaffold0342 (1 HSPs)
scaffold0342 (155-221)||(4556-4622)
[»] scaffold0193 (1 HSPs)
scaffold0193 (130-200)||(3450-3520)
[»] scaffold0338 (1 HSPs)
scaffold0338 (148-220)||(7508-7580)
[»] scaffold0447 (1 HSPs)
scaffold0447 (148-207)||(3353-3412)
[»] scaffold0383 (1 HSPs)
scaffold0383 (148-207)||(5961-6020)
[»] scaffold0088 (1 HSPs)
scaffold0088 (147-214)||(44984-45051)
[»] scaffold1560 (1 HSPs)
scaffold1560 (148-206)||(1160-1217)
[»] scaffold0772 (1 HSPs)
scaffold0772 (148-206)||(4500-4557)
[»] scaffold0395 (1 HSPs)
scaffold0395 (148-206)||(14408-14466)
[»] scaffold0240 (1 HSPs)
scaffold0240 (148-206)||(6276-6334)
[»] scaffold0104 (1 HSPs)
scaffold0104 (148-206)||(51759-51816)
[»] scaffold0044 (1 HSPs)
scaffold0044 (148-206)||(66814-66871)
[»] scaffold0023 (1 HSPs)
scaffold0023 (148-206)||(35062-35119)
[»] scaffold0184 (1 HSPs)
scaffold0184 (148-205)||(34081-34138)
[»] scaffold0083 (1 HSPs)
scaffold0083 (148-221)||(12912-12985)
[»] scaffold0078 (1 HSPs)
scaffold0078 (148-205)||(38706-38763)
[»] scaffold0009 (1 HSPs)
scaffold0009 (148-221)||(236895-236968)


Alignment Details
Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11883621 - 11883722
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11883621 cgttgtgtggacatagacacttcgtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 11883720  T
Q  229 tc 230  Q
    ||    
T  11883721 tc 11883722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 15516540 - 15516439
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    |||||||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||| |||||    
T  15516540 cgttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattttgagttgatg 15516441  T
Q  229 tc 230  Q
    ||    
T  15516440 tc 15516439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 38812349 - 38812446
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  38812349 gttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgaggtgat 38812446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 39654719 - 39654621
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    |||||||||||| ||  |||||||| |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  39654719 cgttgtgtggacgta--cacttggtgatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgaggtgatg 39654622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 15874969 - 15874873
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || |  |||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  15874969 gttgtgtggacgtaaattcttgataatgcaaatgttgtggagataatcaatatatttggaagttgtcctttatattgttgt-gaaagtttgaggtgat 15874873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 12951833 - 12951756
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||    
T  12951833 taatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgagatgatgtc 12951756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 11330366 - 11330447
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || |  |||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  11330366 gttgtgtggacgtaaattcttgataatgcaaatgtggtggagatgatcaatataattggaagttgtcctttatattgttgtg 11330447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 11198945 - 11199017
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  11198945 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtg 11199017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 14294214 - 14294142
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  14294214 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctgtatattgtggtgaaaattgtg 14294142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 14299841 - 14299769
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  14299841 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctgtatattgtggtgaaaattgtg 14299769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 11062414 - 11062481
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  11062414 taatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtg 11062481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 12490120 - 12490171
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12490120 aatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg 12490171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 14522680 - 14522762
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||| |||||  |||||||    
T  14522680 cttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattgtgaattgatgtc 14522762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 47983705 - 47983627
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    ||||||||||| || | ||||| |||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  47983705 gttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgtt 47983627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 47992992 - 47992914
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    ||||||||||| || | ||||| |||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  47992992 gttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgtt 47992914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 48002279 - 48002201
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    ||||||||||| || | ||||| |||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  48002279 gttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgtt 48002201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 48011565 - 48011487
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    ||||||||||| || | ||||| |||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  48011565 gttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgtt 48011487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 40938516 - 40938457
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  40938516 cttgataatgcaaatgttatggagatgatcaatatatttggaagttgtcctctatattgt 40938457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 14297283 - 14297210
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  14297283 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtga 14297210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 14302910 - 14302837
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  14302910 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtga 14302837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 33370220 - 33370317
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | ||||| |||||| | ||| || ||||||||||||||| ||||||||| ||||||||||| ||||| ||| | |||||||||    
T  33370220 gttgtgtggacgtacatacttgataatgcaattgtggttgagatgatcaatataattggaagttatcctttatattattgtgaaaattatgaggtgat 33370317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 35122472 - 35122413
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  35122472 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgt 35122413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 55442152 - 55442211
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttgg-aagttgtcctttatattgttgtg 211  Q
    |||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  55442152 taatgcgaatgttgtggagatgatcaatataattggaaagatgtcctttatattgttgtg 55442211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 48420436 - 48420398
Alignment:
Q  173 tgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48420436 tgatcaatatatttggaagttgtcctttatattgttgtg 48420398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 14060617 - 14060677
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    |||| |||||| ||| |||||| ||||||||||||| || |||||||||||||||||||||    
T  14060617 cttgataatgcaaatattgtggggatgatcaatatagtttgaagttgtcctttatattgtt 14060677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 17138238 - 17138194
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  17138238 tgttgtggagatgatcaatatagttgggagttgtcctttatattg 17138194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 5229434 - 5229513
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||| | |||||| ||| ||||||||||| ||||| ||| ||||||||||||||||    
T  5229434 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgt 5229513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 11883493 - 11883528
Alignment:
Q  1 tacttagaatgtgagaaattctcgaaatggtaaaac 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  11883493 tacttagaatgtgagaaattctcgaaatggtaaaac 11883528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 12562851 - 12562910
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| | ||||||||||||||||||||||||||||| || |||| ||||||||    
T  12562851 cttgataatgcaattgttgtggagatgatcaatatatttggaatttttcctctatattgt 12562910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 9592115 - 9592185
Alignment:
Q  138 gacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    |||||| | ||||| |||||| | |||||| ||| ||||||||||| |||||||||||| |||||||||||    
T  9592115 gacataaatacttgataatgcaattgttgttgaggtgatcaatataattggaagttgtcatttatattgtt 9592185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 15574826 - 15574769
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||||||||||||| ||||  |||||||| |||||||    
T  15574826 cttggtaatgc-aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 15574769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 53899894 - 53899967
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| ||||| |||||||||||||||||| |||| ||||||||| |||| ||| ||| ||| |||||    
T  53899894 cttgataatgcaaatgtggtggagatgatcaatataattgggagttgtcctatataatgtggtgaaaattgtga 53899967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 17913624 - 17913683
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||| ||||||| ||||| || ||||| ||||||||    
T  17913624 cttgataatgcaaatgttgtggagatgaacaatataattggatgtcgtcctatatattgt 17913683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 47786268 - 47786315
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||||||||    
T  47786268 aatgtggtggagatgatcaatataattgggagttgtcctatatattgt 47786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 13816298 - 13816240
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  13816298 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 13816240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 15613845 - 15613788
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  |||||||| |||||||    
T  15613845 cttggtaatgc-aatgttgtggagatgattaatataattgggtgttgtcctatatattg 15613788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 17099499 - 17099441
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  17099499 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 17099441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 17523782 - 17523840
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| ||||||  |||||| |||||||||||||||| |||| ||||||||| |||||||    
T  17523782 cttgataatgcacatgttgcggagatgatcaatataattgggagttgtcctatatattg 17523840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 19572144 - 19572202
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  19572144 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 19572202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 53769443 - 53769386
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  53769443 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 53769386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 55315178 - 55315121
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  55315178 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 55315121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 8630632 - 8630559
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  8630632 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 8630559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 19230845 - 19230772
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  19230845 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 19230772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 41660422 - 41660341
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | |||||| ||| || |||||||| ||||| ||| ||||||||||| |||||    
T  41660422 gttgtgtggacgtaaatacttgataatgcaattgttgttgaggtggtcaatataattggaggttatcctttatattattgtg 41660341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 13977006 - 13977061
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatat 204  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||    
T  13977006 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatat 13977061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 5452171 - 5452272
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    ||||||||||||| | |||||||||||||| | |||| |||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  5452171 cgttgtgtggacacaaacacttggtaatgcaattgttctggagatgatcaatatgtttggaagttgtcctctatattgttgtgaaaattgtgaggtgatg 5452270  T
Q  229 tc 230  Q
    ||    
T  5452271 tc 5452272  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 3672799 - 3672701
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    |||||||||||| || ||||||| |||||| | |||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| |||||    
T  3672799 cgttgtgtggacgtaaacacttgataatgcaattgttgtggagatgatcaatatacttggaagttgtcctctatattgttgtgaaaattgtgatgtgat 3672701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 32967550 - 32967613
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32967550 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 32967613  T

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Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 21615822 - 21615725
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| ||   ||||| |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  21615822 gttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattttgaggtgat 21615725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 24226824 - 24226901
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    ||||||||||| || | ||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  24226824 gttgtgtggacgtaaatacttgataatgcaattgttgtggaggtgatcaatatatttggaagttgtcctttatattgt 24226901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 19861043 - 19860963
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    ||||||||||| ||   ||||| |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19861043 gttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatattgttgt 19860963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 23453738 - 23453666
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  23453738 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtg 23453666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 23465243 - 23465171
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  23465243 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtg 23465171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 431218 - 431155
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  431218 cttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttgtattgttgtg 431155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 7727366 - 7727303
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  7727366 cttgataatgcaaatgttatggagatgatcaatataattggaagttgtcctttatattgttgtg 7727303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 23492780 - 23492729
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23492780 aatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtg 23492729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 28888707 - 28888644
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28888707 cttgataatgcaaatgtagtggatatgatcaatatatttggaagttgtcctttatattgttgtg 28888644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 37189510 - 37189565
Alignment:
Q  155 atgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  37189510 atgcaaatgttgtggaaatgatcaatatatttggaggttgtcctttatattgttgt 37189565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 19404368 - 19404296
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| ||||    
T  19404368 cttgataatgcaaatgtggtggagatgaacaatatatttggaagttgtcctctatattgtggtgaaaattgtg 19404296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 24184586 - 24184658
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  24184586 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtg 24184658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 13793940 - 13793859
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| ||   ||||| |||| | | ||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  13793940 gttgtgtggacgtaattacttgataatacaattgttgaggagatgatcaatatatttggaagatgtcctttatattattgtg 13793859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 11338240 - 11338311
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||| ||| ||| ||||    
T  11338240 cttgataatgcaaatgttgtggagatgatcaatatatatggaa-ttgtcctctatattgtggtgaaaattgtg 11338311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 11582662 - 11582604
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||| |||||||| |||||||    
T  11582662 cttgataatgcaaatgttgtggagataatcaatataattggatgttgtcctatatattg 11582604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 37982178 - 37982144
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttg 194  Q
    |||||||||||||||||||||||||||||||||||    
T  37982178 aatgttgtggagatgatcaatatatttggaagttg 37982144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 9732159 - 9732216
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  9732159 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 9732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 19498575 - 19498529
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||    
T  19498575 aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 19498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 22836609 - 22836710
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    |||||||||||| || |||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||    
T  22836609 cgttgtgtggacgtaaacacttggtaatgcaattgttgtggaaatgatcaatatatttggaagttgtcctctatattgttgtgaaaattatgaggtgatg 22836708  T
Q  229 tc 230  Q
    ||    
T  22836709 tc 22836710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 37235318 - 37235415
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | ||||| |||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||    
T  37235318 gttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttaaattgttgtgaaaattatgaggtgat 37235415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 38035000 - 38035063
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38035000 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 38035063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 36357698 - 36357779
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||||||    |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36357698 gttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctttatattgttgtg 36357779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 20956344 - 20956424
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    |||| |||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||    
T  20956344 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatattgttgtgaaaattgtgaggtgatg 20956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 51657708 - 51657784
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgt 229  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||    
T  51657708 taatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattgtgaagtgatgt 51657784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 19601963 - 19601906
Alignment:
Q  154 aatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19601963 aatgcaaatgttgtggagatcatcaatatatttggaagttgtcctttatattgttgtg 19601906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 21193976 - 21193879
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | |||||  ||||  | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||    
T  21193976 gttgtgtggacgtaaatacttgagaatgtaattgttgtggagatgatcaatatatttggaagttatcctttatattgttgtgaaaattatgaggtgat 21193879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 27673624 - 27673556
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||    
T  27673624 tgttttggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgaggtggtgtc 27673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 5471740 - 5471821
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | ||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  5471740 gttgtgtggacgtaaatacttgataatgcaattgtggtggaggtgatcaatataattggaagttgtcctttatattgttgtg 5471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 8539309 - 8539406
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | | ||| |||||| | |||||||||||||||||||||||||||||||| || |||||||||| ||| ||| | |||||||||    
T  8539309 gttgtgtggacgtaaatatttgataatgcaattgttgtggagatgatcaatatatttggaagttatcatttatattgtcgtgaaaattatgaggtgat 8539406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 8604548 - 8604645
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | | ||| |||||| | |||||||||||||||||||||||||||||||| || |||||||||| ||| ||| | |||||||||    
T  8604548 gttgtgtggacgtaaatatttgataatgcaattgttgtggagatgatcaatatatttggaagttatcatttatattgtcgtgaaaattatgaggtgat 8604645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 22144754 - 22144831
Alignment:
Q  134 tgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||| || ||||||| |||||| |||||||| ||| ||||||||||| ||| |||||||| ||||||||||||||    
T  22144754 tgtggacgtaaacacttgataatgcaaatgttgttgaggtgatcaatataattgaaagttgtcttttatattgttgtg 22144831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 35523799 - 35523872
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  35523799 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtga 35523872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 13378119 - 13378200
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| ||   ||||| |||||| | ||||| |||||||||||||||||||||||| |||| |||||||| |||||    
T  13378119 gttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagatgtcatttatatttttgtg 13378200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 21716985 - 21716917
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||||| |||||||||||||||| ||||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  21716985 taatgcaaatgttgtggagatgagcaatataattgggagttgtcctatatattgtggtgaaaattgtga 21716917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 45050466 - 45050409
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||||||||||||| ||||  |||||||| |||||||    
T  45050466 cttggtaatgc-aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 45050409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 35053626 - 35053553
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  35053626 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 35053553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 49966433 - 49966361
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||  ||||||| ||||    
T  49966433 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtggaaattgtg 49966361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 20821763 - 20821684
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||| | |||||| ||| |||||||||||  |||| ||| ||||||||||||||||    
T  20821763 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgttgt 20821684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 5073682 - 5073739
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  5073682 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 5073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 18506141 - 18506083
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||||||||||| |||||| ||||||||| ||||  |||||||| |||||||    
T  18506141 cttgataatgctaatgttgcggagataatcaatataattgggtgttgtcctatatattg 18506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 18602425 - 18602482
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  18602425 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 18602482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20122039 - 20122096
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  20122039 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 20122096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20826603 - 20826660
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  20826603 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 20826660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 22226764 - 22226707
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  22226764 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 22226707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 22407574 - 22407632
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  22407574 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 22407632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 5675980 - 5676053
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  5675980 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 5676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 41213022 - 41213102
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    ||||||||||| || | ||||| |||||| | |||||| ||| ||||||||||| | ||| ||| ||||||||||| ||||    
T  41213022 gttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataatcggaggttatcctttatatttttgt 41213102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 721275 - 721175
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgt 229  Q
    ||||||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||  |||||||    
T  721275 gttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgtagtgatgt 721176  T
Q  230 c 230  Q
    |    
T  721175 c 721175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 24088733 - 24088815
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||||||||| || |||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  24088733 cgttgtgtggacgtaaacacttggtaatgcaattgttgtggagataatcaatataattggaagttgtcctttatattgttgtg 24088815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 23822879 - 23822960
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||||||    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23822879 gttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 23822960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 23831958 - 23832039
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||||||    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23831958 gttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 23832039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 19670518 - 19670581
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19670518 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 19670581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 23824841 - 23824904
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23824841 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 23824904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 19434826 - 19434907
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19434826 gttgtgtggacgtaaatacttgataattcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 19434907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 4677 - 4728
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4677 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 19658736 - 19658673
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19658736 cttgataatgcaaatgttgtggagatgatcaacatatctggaagttgtcctttatattgttgtg 19658673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 24295961 - 24296024
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  24295961 cttgataatgcaaatgttttggagatgatcaatatatttgaaagttgtcctttatattgttgtg 24296024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 22787411 - 22787493
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||| ||| | | |||||| |||||||    
T  22787411 cttggtaatgcaattgttgtggagatgatcaatatatttggaagtcgtcctctatattgtggtgaagactgtgagttgatgtc 22787493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 7320274 - 7320201
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||| ||| ||| |||||    
T  7320274 cttgataatgcaaatgttgtggagattatcaatatatttggaagttgtcctctatattgtggtgaaaattgtga 7320201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 24572765 - 24572838
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||| |||||    
T  24572765 cttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattgtga 24572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 25304375 - 25304294
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| ||   ||||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  25304375 gttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcatttatattgttgtg 25304294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 22581307 - 22581389
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| || |||||||||||||||||||||| ||||||||||||| |||||||| ||| ||| |||||  |||||||    
T  22581307 cttgataatgcaaacgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattgtgaattgatgtc 22581389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 43641634 - 43641553
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | |||||||||| ||||||||||||||| ||||||||| ||| |||||||||    
T  43641634 gttgtgtggacgtaaatacttgataatgcaattgttgtggaggtgatcaatatatttgaaagttgtccattacattgttgtg 43641553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 22691324 - 22691396
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  22691324 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaactgtg 22691396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 22695971 - 22696043
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  22695971 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaactgtg 22696043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 269973 - 269900
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||| ||||||||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  269973 cttgataatgcaaatgttgtggaggtgatcaatataattgggagttgtcctatatattgtggtgaaaattgtga 269900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 25600747 - 25600688
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| ||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  25600747 cttgataatgcaaatgttgcggagatgatcaatataattgggagttgtcctatatattgt 25600688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 4449603 - 4449676
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| ||||||| | | |||||||||||| |||||||||||||| |||||||| ||| ||| |||||    
T  4449603 cttgataatgcaaatgttgcgaaaatgatcaatataattggaagttgtcctatatattgtggtgaaaattgtga 4449676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 22137183 - 22137264
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| ||||||||  || ||||||||| | ||  |||||||||||||||||||||||    
T  22137183 gttgtgtggacgtaaatacttgataatgcaaatgttgttaaggtgatcaatacaatttaaagttgtcctttatattgttgtg 22137264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 27260369 - 27260312
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatatt 205  Q
    |||| |||||| ||||||||||||||| |||||||| |||| ||||||||| ||||||    
T  27260369 cttgataatgcaaatgttgtggagatggtcaatataattgggagttgtcctatatatt 27260312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 24276677 - 24276613
Alignment:
Q  147 acttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||| |||||| | |||||| ||| ||||||||||| ||||| ||| |||||||||||||||||    
T  24276677 acttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgtg 24276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 28972822 - 28972755
Alignment:
Q  152 gtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    ||||||| ||||| ||||||||||||||||||| |||| |||||||| |||||||| ||| ||| ||||    
T  28972822 gtaatgcaaatgt-gtggagatgatcaatatatatggatgttgtcctctatattgtggtgaaaattgtg 28972755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 12643398 - 12643455
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  12643398 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 12643455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 24827952 - 24827998
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||    
T  24827952 aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 24827998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 24967083 - 24967025
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  24967083 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 24967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 36892095 - 36892141
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  36892095 aatgttgtggagataatcaatataattgggagttgtcctatatattg 36892141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 15043743 - 15043644
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||||||| || ||| |||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||||    
T  15043743 ttgtgtggacgtaaacagttggtaatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatattgttgtgaaaattgtgaggtgatgtc 15043644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 15110681 - 15110780
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||||||| || ||| |||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||||    
T  15110681 ttgtgtggacgtaaacagttggtaatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatattgttgtgaaaattgtgaggtgatgtc 15110780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 43282760 - 43282842
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43282760 cttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtgaaaattgtgaggtgatgtc 43282842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 15852699 - 15852762
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15852699 cttgataatgcaaatgttgtagagatgatcaatatatttggaagttgtcctttatattgttgtg 15852762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 34197547 - 34197610
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34197547 cttgataatgcaaatgttgtggagatgaccaatatatttggaagttgtcctttatattgttgtg 34197610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 14900283 - 14900202
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||||||||||  | |||||||||||| |  || |||||||||||||||||||||| |||||||||||||||||||||||    
T  14900283 gttgtgtggacatgaatacttggtaatgcaatcgtggtggagatgatcaatatatttgaaagttgtcctttatattgttgtg 14900202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 37958439 - 37958502
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  37958439 cttgataatgcaaatgttgtagagatgatcaatatatttggaagttgtcctttgtattgttgtg 37958502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 18495780 - 18495852
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  18495780 cttgataatgcaaatgttgtgaagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtg 18495852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 27959817 - 27959754
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| || || |||||||||||||||||| |||||||||||||||||||||||||||    
T  27959817 cttgataatgcaaacgtagtggagatgatcaatataattggaagttgtcctttatattgttgtg 27959754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 41167317 - 41167380
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  41167317 cttgataatgcaaatgttgtggagatgatcaatatatttgaaagttgtcatttatattgctgtg 41167380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 52266843 - 52266925
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| | |||||| ||||||||||||||||||||||||| |||| |||||||| ||| ||| ||||| ||||||||    
T  52266843 cttgataatgcaattgttgtagagatgatcaatatatttggaagttatcctctatattgtggtgaaaattgtgaagtgatgtc 52266925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 41257710 - 41257807
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||  || | ||||| |||||| | ||| || ||||||||||||||| ||||||||| ||||||||||||||||| ||| | |||||||||    
T  41257710 gttgtgtggatgtaaatacttgataatgcaattgtggttgagatgatcaatataattggaagttatcctttatattgttgtgaaaattatgaggtgat 41257807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 44054707 - 44054648
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  44054707 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgt 44054648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 12245615 - 12245696
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| ||   ||||| |||||| | | ||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  12245615 gttgtgtggacgtaattacttgataatgcaattattgaggagacgatcaatatatttggaagatgtcctttatattgttgtg 12245696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 13811017 - 13811085
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    ||||||||| || |||||||||||||||||||||||| |||||||| ||| ||| ||||| || |||||    
T  13811017 tgttgtggaaataatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgaagtaatgtc 13811085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 47469692 - 47469772
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    ||||||||||| || | ||||| |||||| |  ||||| ||| ||||||||||| ||||| ||| ||||||||||||||||    
T  47469692 gttgtgtggacgtaaatacttgataatgcaatcgttgtcgaggtgatcaatataattggaggttatcctttatattgttgt 47469772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 5372055 - 5372134
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||  | |||||| ||| ||||||||||| ||||| ||| ||||||||||||||||    
T  5372055 ttgtgtggacgtaaatacttgataatgtcattgttgttgaggtgatcaatataattggaggttatcctttatattgttgt 5372134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 13049537 - 13049594
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  13049537 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 13049594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 15274133 - 15274190
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  15274133 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 15274190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 53706163 - 53706221
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  53706163 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 53706221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 53909143 - 53909201
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  53909143 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctgtatattg 53909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 30233917 - 30233973
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatat 204  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||    
T  30233917 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatat 30233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 9057989 - 9058086
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  9057989 gttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgaggtgat 9058086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 10862212 - 10862314
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaa-gtgtgaggtgat 227  Q
    |||||||||||| || |||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||  |||||||||||    
T  10862212 cgttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatgtatttggaagttgtcctctatattgtggtgaaaatttgtgaggtgat 10862311  T
Q  228 gtc 230  Q
    |||    
T  10862312 gtc 10862314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 15913821 - 15913878
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15913821 taatgcaaatgttgtggagatgatcaatatatttggaagttgtcatttatattgttgt 15913878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 11285999 - 11285927
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||    
T  11285999 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttctcctttatattgtggtgaaaattgtg 11285927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 12753669 - 12753610
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  12753669 cttgataatgcaaatgttgtggagatgatcaatatatttggaagatgtcctttatattgt 12753610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 12249489 - 12249571
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||| |||||  |||||||    
T  12249489 cttgataatgcaaatgttgtggagatgatcaatatatttggtagttgtcctctatattgtggtgaaaattgtgaattgatgtc 12249571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 49049177 - 49049259
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| | ||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||| |||||||    
T  49049177 cttgataatgcaattgtggtggagatgatcaacatatttgaaagttgtcctttatattgtggtggaaattgtgagttgatgtc 49049259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 13273531 - 13273472
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  13273531 cttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgt 13273472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 13376458 - 13376396
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  13376458 cttgataatgcaaatgttgtggagatgatcaatata-ttggaagttatcatttatattgttgtg 13376396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 13388742 - 13388693
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  13388742 tgttgaggagatgatcaatatatttggaatatgtcctttatattgttgtg 13388693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 15629545 - 15629481
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtga 226  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||| ||| ||| ||||| ||||    
T  15629545 tgttgtggaaatgatcaatatatttgaaagttgtcctctatattgtggtgaaaattgtgaagtga 15629481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 15823786 - 15823844
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  ||||||||||||||||    
T  15823786 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctttatattg 15823844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 2192072 - 2192131
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||||    
T  2192072 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 2192131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 7291641 - 7291582
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||||    
T  7291641 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 7291582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 21676390 - 21676469
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||| | |||||| ||| |||||||||||  |||| ||| ||||||||||||||||    
T  21676390 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgttgt 21676469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 2436412 - 2436355
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  2436412 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 2436355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 10988399 - 10988342
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  10988399 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 10988342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 13912489 - 13912546
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  13912489 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 13912546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 16480312 - 16480369
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  16480312 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 16480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 26010578 - 26010624
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||    
T  26010578 aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 26010624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 42057539 - 42057596
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  42057539 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 42057596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 45453632 - 45453705
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatat-atttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||| ||||||||||| |||||| ||| |||||||||||| |||||||| ||| ||| ||||    
T  45453632 cttgataatgcaaatgatgtggagatgaacaatataattgggaagttgtcctatatattgtggtgaaaattgtg 45453705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 142415 - 142343
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| ||||    
T  142415 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtg 142343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 9322419 - 9322499
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    ||||| ||||| || | ||||| |||||| | |||||| ||| |||||||||||  |||| ||| ||||||||||||||||    
T  9322419 gttgtatggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgttgt 9322499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 21199550 - 21199628
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21199550 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt-gaaagtttgaggtgat 21199628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 25756762 - 25756665
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | ||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  25756762 gttgtgtggacgtaaatactttataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgaggtgat 25756665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 25294750 - 25294676
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  25294750 taatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgaggtgat 25294676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 38532422 - 38532354
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||| ||||||||    
T  38532422 tgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtagaaattgtgaagtgatgtc 38532354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 21192135 - 21192201
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  21192135 aatgttgtggagatgatcaatatatttggaagttgtcatttatattgttgt-gaaagtttgaggtgat 21192201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 17730837 - 17730896
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17730837 cttgttaatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgt 17730896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 21696348 - 21696289
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21696348 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgt 21696289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 31195661 - 31195724
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  31195661 cttgataatgcaaatgttgcggagataatcaatatatttggaagttgtcctttatattgttgtg 31195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 39448201 - 39448264
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39448201 cttgataatgcaaatgttgtggagatgatcaatataatttgaagttgtcctttatattgttgtg 39448264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 18768138 - 18768220
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| | ||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||| ||||| ||||||||    
T  18768138 cttgataatgcaattgttgtggagatgataaatatatttggaagttgtcctctatattgtggtgaaaattgtgaagtgatgtc 18768220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 23148700 - 23148622
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    |||||||||||  | ||||||| |||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  23148700 gttgtgtggacgcaaacacttgataatgcaaatgttgttgaggtgatcaatataattggaagttgtcctttatattgtt 23148622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 37655003 - 37655084
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | ||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  37655003 gttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatgtggaagttatcctttatactgttgtg 37655084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 28543723 - 28543664
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  28543723 cttgataatgcaaatgttgtggagatgatcaatatatgtggaagttgtcctctatattgt 28543664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 20655396 - 20655478
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| |||||  |||||||    
T  20655396 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgatgtc 20655478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 23836026 - 23835945
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| ||   ||||| |||||| | ||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  23836026 gttgtgtggacgtaattacttgataatgcaattgttgaggaaatgatcaatatatttggaagttttcctttatattgttgtg 23835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 20568639 - 20568711
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  20568639 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtg 20568711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 20574832 - 20574904
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  20574832 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtg 20574904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 22737253 - 22737336
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtg-tgaggtgatgtc 230  Q
    |||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||| || ||| ||| || ||||||||||||    
T  22737253 cttggtaatgcatttgtggtggagatgatcaatatatttggaagttgtcctctatatggtggtgaaaattgttgaggtgatgtc 22737336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 25121329 - 25121271
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| |||||||||||||| |||||||    
T  25121329 cttgataatgcaaatgttgtggagataatcaatataattggaagttgtcctatatattg 25121271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 33612440 - 33612498
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||| | |||||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  33612440 taatgcaattgttgttgaggtgatcaatataattggaagttgtcctttatattgttgtg 33612498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 20648811 - 20648884
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||||||||||| |||| |||||| || |||||||| ||| ||| |||||    
T  20648811 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgttctatatattgtggtgaaaattgtga 20648884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 21679989 - 21679917
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| ||||| |||||||||| |||||||||||||||||||| | |||||||| ||| ||| ||||    
T  21679989 cttgataatgcaaatgtggtggagatgaacaatatatttggaagttgtcatctatattgtggtgaaaattgtg 21679917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 18042918 - 18042997
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||| | |||||| ||| ||||||||||| ||||| ||| ||||||||||||||||    
T  18042918 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgt 18042997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 24548005 - 24547948
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||||||||||||| ||||  |||||||| |||||||    
T  24548005 cttggtaatgc-aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 24547948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 24718789 - 24718861
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||  ||||||| ||||    
T  24718789 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtggaaattgtg 24718861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 33171071 - 33170991
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    ||||||||||| || | ||||| |||||| | |||||| ||| ||||||||||| ||||| | | ||||||||||||||||    
T  33171071 gttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggctatcctttatattgttgt 33170991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 45560591 - 45560655
Alignment:
Q  147 acttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||| |||||| | |||||| ||| ||||||||||| ||||| ||| |||||||||||||||||    
T  45560591 acttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgtg 45560655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 22312477 - 22312398
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||| | |||||| ||| |||||||||||  |||| ||| ||||||||||||||||    
T  22312477 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgttgt 22312398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 22908856 - 22908915
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||||    
T  22908856 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 22908915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 16417047 - 16416989
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  16417047 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 16416989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 16675698 - 16675755
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  16675698 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 16675755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 21853268 - 21853325
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  21853268 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 21853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 37605779 - 37605706
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  37605779 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 37605706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 37610153 - 37610080
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  37610153 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 37610080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 24930487 - 24930559
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||  ||||||| ||||    
T  24930487 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgaggtggaaattgtg 24930559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 6002 - 6102
Alignment:
Q  129 cgttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatg 228  Q
    |||||||||||| || | ||||| |||||  | |||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  6002 cgttgtgtggacgtaaatacttgataatgaaattgttgtggagattatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgaggtgatg 6101  T
Q  229 t 229  Q
    |    
T  6102 t 6102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 4731 - 4794
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4731 cttgataatgctaatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtg 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 78468 - 78405
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78468 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 78405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 24969 - 25066
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgat 227  Q
    ||||||||||| || | ||||| |||||  | |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||    
T  24969 gttgtgtggacgtaaatacttgataatgaaattgttgtggagatgatcaatatatttggaagttgtgctttatactgttgtgaaaagtatgaggtgat 25066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 34279 - 34198
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34279 gttgtgtggacgtaaatacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatattgttgtg 34198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 8028 - 8100
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  8028 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattgtg 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 13417 - 13489
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  13417 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattgtg 13489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 3670 - 3733
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3670 cttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg 3733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 106300 - 106363
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  106300 cttgataatgcaaatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtg 106363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 108433 - 108356
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||| | |||| |||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||    
T  108433 taatgcaattgttctggagatgatcaatatatttagaaattgtcctttatattgtggtggaaattgtgaggtgatgtc 108356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 130696 - 130615
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | ||| || ||| ||||||||||| ||||| ||| |||||||||||||||||    
T  130696 gttgtgtggacgtaaatacttgataatgcaattgtggttgaggtgatcaatataattggaggttatcctttatattgttgtg 130615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 16889125 - 16889188
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16889125 cttgataatgcaaatgatgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 16889188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 33323602 - 33323539
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33323602 cttgataatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtg 33323539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 35137329 - 35137392
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35137329 cttgataatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtg 35137392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 15739040 - 15738958
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| ||  ||| ||||| ||||||||    
T  15739040 cttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtaaaaattgtgaagtgatgtc 15738958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 22866959 - 22866886
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||| |||||    
T  22866959 cttgataatgcaaatgttgtggagatgatcaatttatttggaagttgtcctctatattgtggtgaaaattgtga 22866886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 25368731 - 25368790
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  25368731 cttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgt 25368790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 22846941 - 22846860
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||| | | |||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  22846941 gttgtgtggacgtaaatacttgataattcaattgttgtggagataatcaatatatttggaagttatcctttatatcgttgtg 22846860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 28196155 - 28196227
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| | || |||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  28196155 cttgataatgcaattggtgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtg 28196227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 18383060 - 18383123
Alignment:
Q  147 acttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||| |||||| | ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  18383060 acttgataatgcaattgttgaggagatgatcaatat-tttggaagttgtcctttgtattgttgtg 18383123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 16084207 - 16084148
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  16084207 cttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgt 16084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 16105349 - 16105290
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  16105349 cttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgt 16105290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 13622487 - 13622545
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  13622487 cttgataatgcaaatgttgtggagataatcaatataattgggagttgtcctatatattg 13622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 18776001 - 18775928
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  18776001 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 18775928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 31627229 - 31627156
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||||||||||||||||||||||| ||||   ||||||| |||||||| ||| ||| |||||    
T  31627229 cttgataatgcaaatgttgtggagatgatcaatataattggggattgtcctatatattgtggtgaaaattgtga 31627156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 18004346 - 18004418
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||  ||||||| ||||    
T  18004346 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtggaaattgtg 18004418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 34965720 - 34965640
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||| || || | ||||| |||||| | |||||| ||| ||||||||||| ||||| ||| ||||||||||||||||    
T  34965720 gttgtgtgaacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgt 34965640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 18104831 - 18104910
Alignment:
Q  131 ttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 210  Q
    |||||||||| || | ||||| |||||| | |||| | ||| ||||||||||| ||||| ||| ||||||||||||||||    
T  18104831 ttgtgtggacgtaaatacttgataatgcaattgtttttgaggtgatcaatataattggaggttatcctttatattgttgt 18104910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 1651324 - 1651381
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||||||||||||| ||||  || ||||| |||||||    
T  1651324 cttggtaatgc-aatgttgtggagatgatcaatataattgggtgtcgtcctatatattg 1651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 14627983 - 14628040
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  14627983 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 14628040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 15736554 - 15736612
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| |||||||    
T  15736554 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattg 15736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 16230371 - 16230314
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  16230371 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 16230314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 18431424 - 18431366
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  18431424 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 18431366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 18569377 - 18569319
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  18569377 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 18569319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 23993951 - 23993894
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  23993951 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 23993894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 26088625 - 26088568
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  26088625 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 26088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 35017055 - 35017113
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  35017055 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 35017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 25646200 - 25646272
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||| ||||||| | ||||  |||||||| |||||||  ||||||| ||||    
T  25646200 cttgataatgcaaatgttgtggagataatcaataaaattgggtgttgtcctatatattgaggtggaaattgtg 25646272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 30863 - 30781
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |||||  |||||||    
T  30863 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgaattgatgtc 30781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 69553 - 69494
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  69553 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgt 69494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 117985 - 118043
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  117985 taatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg 118043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 2856 - 2924
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||| ||||||||    
T  2856 tgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgaagtgatgtc 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 2000 - 2072
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  2000 cttgataatgcaaatgttgtcgagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattgtg 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 7371 - 7303
Alignment:
Q  162 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  7371 tgttgtagaggtgatcaatatatttggatgttgtcctttatattgttgtggaaattgtggggtgatgtc 7303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 23804 - 23867
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  23804 cttgataatgcaaatgttatggagataatcaatatatttggaagttgtcctttatattgttgtg 23867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 7044 - 7107
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  7044 cttgataatgcaaatgttgtggagatgatcaatataatttgaagttgtcctttatattgttgtg 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 71658 - 71721
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    |||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  71658 cttgataatgcgaatgttgtggagatgatcaatataattggaaggtgtcctttatattgttgtg 71721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 6658 - 6588
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |||||  |||||||    
T  6658 aatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgaattgatgtc 6588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 4804 - 4754
Alignment:
Q  161 atgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4804 atgttgtggagataatcaatatatttggaagttgtcctttatattgttgtg 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 20486 - 20404
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| | ||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||| |||||| |||||||    
T  20486 cttgataatgcaattgttgtggatatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgagttgatgtc 20404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 27315 - 27233
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| | ||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||| |||||| |||||||    
T  27315 cttgataatgcaattgttgtggatatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgagttgatgtc 27233  T

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Target: scaffold0092 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 2194 - 2124
Alignment:
Q  160 aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |||||  |||||||    
T  2194 aatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgaattgatgtc 2124  T

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Target: scaffold0021 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 10452 - 10370
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||| |||||  |||||||    
T  10452 cttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattgtgaattgatgtc 10370  T

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Target: scaffold0750 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 6715 - 6792
Alignment:
Q  153 taatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtc 230  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||  |||||||    
T  6715 taatgcaaattttgtggagatgatcaatataattggaagttgtcctttatattgtggtgaaaattgtgaattgatgtc 6792  T

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Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 78190 - 78271
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || |  |||| |||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  78190 gttgtgtggacgtaaattcttgataatgcaattgttgtggagatgatcaatatatttggaggctgtcctttatattattgtg 78271  T

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Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 8866 - 8794
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  8866 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtg 8794  T

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Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 32370 - 32298
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  32370 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtg 32298  T

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Target: scaffold0456 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 12983 - 12936
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgt 195  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||    
T  12983 cttgataatgctaatgttgtggagatgatcaatataattggaagttgt 12936  T

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Target: scaffold0346 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 13971 - 14050
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | |||||||||||  | ||  |||||| ||||||||||| |||||||||||||||||||||||||||    
T  13971 gttgtgtggacgtaaatacttggtaatgaaattg--gtggaggtgatcaatataattggaagttgtcctttatattgttgtg 14050  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 145718 - 145657
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaat--atatttggaagttgtcctttatattgt 207  Q
    |||| ||||||||||||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  145718 cttgataatgctaatgttgtggagatgatcaatatatatatggaagttgtcctctatattgt 145657  T

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Target: scaffold0786 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 497 - 416
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||  |||||| |||||||| ||||||||||||| | ||||||||| ||||||| |||||||||    
T  497 gttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacattgttgtg 416  T

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Target: scaffold0786; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 5552 - 5471
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||  |||||| |||||||| ||||||||||||| | ||||||||| ||||||| |||||||||    
T  5552 gttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacattgttgtg 5471  T

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Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 4917 - 4844
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  4917 cttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtga 4844  T

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Target: scaffold0390 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 4085 - 4004
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||  |||||| |||||||| ||||||||||||| | ||||||||| ||||||| |||||||||    
T  4085 gttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacattgttgtg 4004  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 85229 - 85148
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg 211  Q
    ||||||||||| || | ||||| |||||| | |||||| ||| ||||||||||||||||| ||| |||||||||||| ||||    
T  85229 gttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatatatttggaggttatcctttatattgctgtg 85148  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 26367 - 26289
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtt 208  Q
    ||||||||||| || | ||||| |||| | | |||||| ||| ||||||||||| ||||| ||| ||||||||||||||    
T  26367 gttgtgtggacgtaaatacttgataatccaattgttgttgaggtgatcaatataattggaggttatcctttatattgtt 26289  T

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Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 3447 - 3388
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| ||||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  3447 cttgataatgcaaatgttgtggatatgatcaatataattgggagttgtcctatatattgt 3388  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 71826 - 71885
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||||||||||| |||| |||| |||| ||||||||    
T  71826 cttgataatgcaaatgttgtggagatgatcaatataattgggagttatcctatatattgt 71885  T

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Target: scaffold0342 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 4622 - 4556
Alignment:
Q  155 atgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||||||||||||||||| ||| |||| ||||||||| |||||||| ||| ||| |||||    
T  4622 atgcaaatgttgtggagatgatcaaaataattgggagttgtcctatatattgtggtgaaaattgtga 4556  T

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Target: scaffold0193 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 3520 - 3450
Alignment:
Q  130 gttgtgtggacatagacacttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtccttt 200  Q
    |||||||||||  | | ||||| |||||  | |||||||||||||||||||||||||||||||| ||||||    
T  3520 gttgtgtggacgcaaatacttgataatgaaattgttgtggagatgatcaatatatttggaagttatccttt 3450  T

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Target: scaffold0338 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 7580 - 7508
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtg 220  Q
    |||| |||||| |||||| ||||||||||||||||| |||| ||| ||||| |||||||| ||| ||| ||||    
T  7580 cttgataatgcaaatgttttggagatgatcaatataattgggagtggtcctatatattgtggtgaaaattgtg 7508  T

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Target: scaffold0447 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 3412 - 3353
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||||    
T  3412 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 3353  T

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Target: scaffold0383 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 6020 - 5961
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgt 207  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||||    
T  6020 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 5961  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 44984 - 45051
Alignment:
Q  147 acttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaa 214  Q
    ||||| |||||| | |||||| ||| |||||||||||  |||| ||| ||||||||||||||||||||    
T  44984 acttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgttgtggaa 45051  T

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Target: scaffold1560 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 1160 - 1217
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  1160 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 1217  T

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Target: scaffold0772 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 4557 - 4500
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  4557 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 4500  T

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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 14466 - 14408
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| ||| |||||||||||||||||||| ||||  |||||||| |||||||    
T  14466 cttgataatgcaaatattgtggagatgatcaatataattgggtgttgtcctatatattg 14408  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 6334 - 6276
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    |||| |||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  6334 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 6276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 51816 - 51759
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  51816 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 51759  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 66814 - 66871
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  66814 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 66871  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 35119 - 35062
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattg 206  Q
    ||||||||||| |||||||||||||| ||||||||| ||||  |||||||| |||||||    
T  35119 cttggtaatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattg 35062  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 34138 - 34081
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatatt 205  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||    
T  34138 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatatt 34081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 12985 - 12912
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||| ||| ||| |||||    
T  12985 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtga 12912  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 38706 - 38763
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatatt 205  Q
    |||| |||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||    
T  38706 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatatt 38763  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 236968 - 236895
Alignment:
Q  148 cttggtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtga 221  Q
    |||| |||||| || | ||||||||||| ||||||| ||||  |||||||| |||||||| ||||||| |||||    
T  236968 cttgataatgcaaaagatgtggagatgaacaatataattgggtgttgtcctatatattgtggtggaaattgtga 236895  T

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