View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8830_low_35 (Length: 281)
Name: NF8830_low_35
Description: NF8830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8830_low_35 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 47116536 - 47116798
Alignment:
| Q |
19 |
tttagttacaaatttcaaatcacataatatagtctattgagatgnnnnnnnnnnttaatattatttggtggaaaactggtaaggaaagagaaaatgaaag |
118 |
Q |
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| T |
47116536 |
tttagttacgaatttcaaatcacataatatagtctattgagaagaagaaaaaaaaaaaaattatttggtggaaaactggtaaggaaagagaaaatgaaag |
47116635 |
T |
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| Q |
119 |
aaattatttgtgctaattgtggtattaattactgaaagttcggggagacagttacaaagaaaatttccacgtcatacatctcattcaatgatgttatgtt |
218 |
Q |
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| T |
47116636 |
aaattatttgtgctaattgtggtattaattactgaaagttcggggagacagttacaaagaaaagttccacgtcatacatctcattcaatgatgttatgtt |
47116735 |
T |
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| Q |
219 |
aatgaacgaatccccaatccttccacaatagatggacaccactccaagcttcctcataccctt |
281 |
Q |
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| T |
47116736 |
aatgaacgaatccccaatccttccacaatagatggacaccactccaagcttcctcataccctt |
47116798 |
T |
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