View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8831_high_14 (Length: 207)

Name: NF8831_high_14
Description: NF8831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8831_high_14
NF8831_high_14
[»] chr4 (23 HSPs)
chr4 (20-207)||(24478332-24478519)
chr4 (130-199)||(32057713-32057782)
chr4 (131-207)||(24870659-24870735)
chr4 (144-207)||(38944384-38944447)
chr4 (129-207)||(31263490-31263567)
chr4 (144-207)||(37340111-37340174)
chr4 (129-207)||(5333195-5333272)
chr4 (129-207)||(6487908-6487985)
chr4 (129-207)||(7413154-7413231)
chr4 (129-207)||(7459234-7459311)
chr4 (129-207)||(7512829-7512906)
chr4 (129-207)||(16476926-16477003)
chr4 (129-207)||(30044573-30044650)
chr4 (129-207)||(36526130-36526207)
chr4 (129-207)||(39284564-39284641)
chr4 (129-207)||(49882698-49882775)
chr4 (130-207)||(13389082-13389158)
chr4 (129-206)||(18813433-18813509)
chr4 (19-84)||(24469215-24469279)
chr4 (130-207)||(36752421-36752497)
chr4 (129-207)||(12821227-12821302)
chr4 (129-207)||(21378350-21378425)
chr4 (127-207)||(28758439-28758519)
[»] chr7 (18 HSPs)
chr7 (136-207)||(12645293-12645364)
chr7 (136-207)||(36251712-36251783)
chr7 (150-207)||(6328183-6328240)
chr7 (136-207)||(46021426-46021497)
chr7 (129-207)||(27396303-27396380)
chr7 (129-207)||(39580537-39580615)
chr7 (130-207)||(35157074-35157150)
chr7 (130-206)||(16842037-16842113)
chr7 (129-207)||(34708736-34708811)
chr7 (127-207)||(45957320-45957400)
chr7 (129-207)||(26794974-26795053)
chr7 (129-207)||(4674298-4674375)
chr7 (129-207)||(8037606-8037684)
chr7 (129-207)||(8059907-8059985)
chr7 (129-207)||(17895696-17895773)
chr7 (129-207)||(31717359-31717436)
chr7 (129-207)||(48612579-48612656)
chr7 (127-207)||(41708530-41708608)
[»] chr1 (19 HSPs)
chr1 (136-207)||(44836113-44836184)
chr1 (129-207)||(27078610-27078687)
chr1 (129-207)||(13048796-13048873)
chr1 (129-207)||(13053793-13053870)
chr1 (129-207)||(15324443-15324520)
chr1 (129-207)||(48392018-48392095)
chr1 (144-207)||(11080964-11081027)
chr1 (136-207)||(23225286-23225356)
chr1 (136-207)||(27227145-27227216)
chr1 (129-207)||(8312516-8312594)
chr1 (129-207)||(13018135-13018212)
chr1 (129-207)||(19338167-19338244)
chr1 (129-207)||(47429581-47429658)
chr1 (130-207)||(32947682-32947758)
chr1 (130-207)||(35758337-35758413)
chr1 (136-207)||(236632-236701)
chr1 (129-207)||(270312-270387)
chr1 (163-207)||(8793197-8793241)
chr1 (159-207)||(45458674-45458721)
[»] chr2 (16 HSPs)
chr2 (129-207)||(816408-816486)
chr2 (129-207)||(22999137-22999215)
chr2 (129-207)||(22382321-22382399)
chr2 (129-207)||(22914347-22914425)
chr2 (128-207)||(32517805-32517884)
chr2 (136-207)||(40710830-40710901)
chr2 (129-207)||(4014802-4014879)
chr2 (129-207)||(23497501-23497578)
chr2 (129-207)||(36216742-36216819)
chr2 (129-207)||(36755010-36755087)
chr2 (129-207)||(40812079-40812156)
chr2 (129-207)||(44948081-44948158)
chr2 (129-206)||(31671227-31671304)
chr2 (130-207)||(34667106-34667182)
chr2 (130-207)||(36754731-36754807)
chr2 (136-192)||(637041-637097)
[»] chr8 (26 HSPs)
chr8 (129-207)||(11100277-11100354)
chr8 (129-207)||(13403408-13403484)
chr8 (129-207)||(41562504-41562583)
chr8 (144-206)||(24197831-24197893)
chr8 (129-207)||(36586544-36586621)
chr8 (131-207)||(19649489-19649564)
chr8 (129-207)||(24242572-24242651)
chr8 (144-203)||(32778564-32778623)
chr8 (151-194)||(39709634-39709677)
chr8 (160-207)||(40418190-40418237)
chr8 (129-204)||(42007320-42007394)
chr8 (129-207)||(4430724-4430801)
chr8 (129-207)||(6317362-6317439)
chr8 (129-207)||(25063402-25063479)
chr8 (129-207)||(27817438-27817515)
chr8 (129-207)||(31639091-31639168)
chr8 (129-195)||(33540226-33540292)
chr8 (129-207)||(34711544-34711621)
chr8 (129-207)||(37295188-37295265)
chr8 (162-207)||(11021399-11021444)
chr8 (130-207)||(27849733-27849809)
chr8 (131-207)||(4977025-4977100)
chr8 (151-207)||(11109867-11109923)
chr8 (129-207)||(16501711-16501786)
chr8 (130-194)||(37820883-37820947)
chr8 (131-207)||(38953471-38953546)
[»] chr6 (6 HSPs)
chr6 (129-199)||(9297827-9297897)
chr6 (129-207)||(10531448-10531525)
chr6 (129-207)||(31444281-31444356)
chr6 (129-207)||(1855068-1855145)
chr6 (129-207)||(12795008-12795085)
chr6 (129-207)||(735507-735582)
[»] chr5 (33 HSPs)
chr5 (129-207)||(6672303-6672380)
chr5 (129-207)||(22792098-22792176)
chr5 (129-207)||(23311162-23311239)
chr5 (129-207)||(34856643-34856720)
chr5 (129-206)||(30528045-30528122)
chr5 (129-206)||(30568385-30568462)
chr5 (144-207)||(1271159-1271222)
chr5 (129-207)||(8595470-8595546)
chr5 (128-207)||(16496662-16496740)
chr5 (128-207)||(25328292-25328370)
chr5 (129-207)||(42645452-42645531)
chr5 (129-207)||(1244170-1244247)
chr5 (129-207)||(4165021-4165098)
chr5 (136-206)||(9640530-9640599)
chr5 (129-207)||(17869113-17869190)
chr5 (129-207)||(18625604-18625681)
chr5 (129-207)||(23074633-23074710)
chr5 (129-206)||(26266988-26267066)
chr5 (129-207)||(26802396-26802473)
chr5 (129-207)||(26809946-26810023)
chr5 (129-207)||(26824973-26825050)
chr5 (129-207)||(27389916-27389993)
chr5 (129-207)||(34930287-34930364)
chr5 (129-207)||(36569341-36569418)
chr5 (129-207)||(36790304-36790381)
chr5 (129-207)||(36854147-36854224)
chr5 (136-206)||(37191307-37191376)
chr5 (129-207)||(39150915-39150992)
chr5 (129-207)||(42448273-42448350)
chr5 (130-207)||(10393492-10393568)
chr5 (150-207)||(26526575-26526632)
chr5 (129-207)||(39527994-39528069)
chr5 (131-203)||(41215225-41215297)
[»] chr3 (22 HSPs)
chr3 (129-207)||(47069069-47069146)
chr3 (127-207)||(21129108-21129188)
chr3 (129-207)||(2096572-2096651)
chr3 (129-207)||(29212052-29212131)
chr3 (129-207)||(31828462-31828538)
chr3 (129-207)||(1242279-1242356)
chr3 (129-207)||(3440788-3440865)
chr3 (129-207)||(3917828-3917905)
chr3 (129-207)||(4232166-4232243)
chr3 (129-207)||(5998771-5998848)
chr3 (129-207)||(8128279-8128356)
chr3 (129-207)||(10229019-10229096)
chr3 (129-207)||(11029726-11029803)
chr3 (129-207)||(15003690-15003767)
chr3 (129-207)||(24910277-24910354)
chr3 (129-207)||(27002729-27002806)
chr3 (129-207)||(32960967-32961044)
chr3 (129-207)||(48555898-48555975)
chr3 (129-206)||(19163697-19163773)
chr3 (130-195)||(37278525-37278590)
chr3 (129-206)||(43897952-43898028)
chr3 (130-207)||(45475222-45475298)
[»] scaffold0223 (1 HSPs)
scaffold0223 (144-205)||(22984-23045)
[»] scaffold0160 (1 HSPs)
scaffold0160 (144-207)||(22144-22207)
[»] scaffold0515 (1 HSPs)
scaffold0515 (129-207)||(2540-2617)
[»] scaffold0402 (1 HSPs)
scaffold0402 (129-207)||(1230-1307)
[»] scaffold0306 (1 HSPs)
scaffold0306 (129-207)||(2540-2617)
[»] scaffold0879 (1 HSPs)
scaffold0879 (19-84)||(3478-3542)


Alignment Details
Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 24478332 - 24478519
Alignment:
Q  20 tataaataagcaaaattatgtcttatgctataacttttgtgccactattgtcaatgaattaataagctacttcaaacttaa-tacttgtgttgacatgac 118  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  24478332 tataaataagcaaaattatgttttatgctataacttttgtgccactattgtcaatgaattaataagctacttc-aacttaattacttgtgttgacgtgac 24478430  T
Q  119 cattcggtacttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| | | ||||||||    
T  24478431 catacggtacttttttgtttggtacatagaggagatgacaaaaccatcataaacccacacatataaagtggaggtatcagagttcgaac 24478519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 32057713 - 32057782
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggg 199  Q
    ||||| ||| ||| |||||||||||| |||||||||| ||||| |||||| | |||||||||||||||||    
T  32057713 ttttttttttgtagatagacgagatgacaaaaccatcataaactcacacacacaaagtggaggtaccggg 32057782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 24870735 - 24870659
Alignment:
Q  131 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||| ||||||| ||| |||||||| |||| ||||| ||||| ||||||  |||||||||||||||| |||||||||    
T  24870735 ttttttttggtagataaacgagatggcaaagccatcataaactcacacacgtaaagtggaggtaccgaggttcgaac 24870659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 38944384 - 38944447
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||||||| |||||||||| ||||| |||| | ||||||||||||||  |||||||||||    
T  38944384 atagacgagatgacaaaaccatcataaactcacatacataaagtggaggtattggggttcgaac 38944447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 31263490 - 31263567
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  31263490 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 31263567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 37340111 - 37340174
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||||||| ||||| |||| ||||| |||||| | ||||||||| ||||| |||||||||    
T  37340111 atagacgagatgacaaaatcatcataaactcacacacacaaagtggagataccgtggttcgaac 37340174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 5333195 - 5333272
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  5333195 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 5333272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 6487985 - 6487908
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  6487985 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 6487908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 7413231 - 7413154
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| ||||  |||  ||||| ||||||||||| |||||||||||||| |||||||    
T  7413231 ttttttttttggtagatagacgaaatgacaaagtcattataaactcacacatataa-gtggaggtaccgggattcgaac 7413154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 7459311 - 7459234
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| ||||  |||  ||||| ||||||||||| |||||||||||||| |||||||    
T  7459311 ttttttttttggtagatagacgaaatgacaaagtcattataaactcacacatataa-gtggaggtaccgggattcgaac 7459234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 7512906 - 7512829
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  7512906 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 7512829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 16476926 - 16477003
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  16476926 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 16477003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 30044573 - 30044650
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  30044573 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 30044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 36526130 - 36526207
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36526130 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36526207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 39284564 - 39284641
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||||| ||  ||||| |||||| | || ||||||||||||||||||||||    
T  39284564 ttttttttttggtagatagacgaaatgacaaaactattataaactcacacacacaa-gtggaggtaccggggttcgaac 39284641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 49882698 - 49882775
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  49882698 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 49882775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 13389158 - 13389082
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| || |||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  13389158 ttttttttgggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 13389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 18813509 - 18813433
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || |||||||||||||||||||||    
T  18813509 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaa 18813433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 24469279 - 24469215
Alignment:
Q  19 ttataaataagcaaaattatgtcttatgctataacttttgtgccactattgtcaatgaattaataa 84  Q
    ||||||| |||||||| ||| | |||||||||| |||| ||| ||||||| |||||||||||||||    
T  24469279 ttataaaaaagcaaaagtatcttttatgctatagcttt-gtgtcactattttcaatgaattaataa 24469215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 36752497 - 36752421
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||| |||||| ||||||||| ||||||||||||    
T  36752497 tttttttttggtagatagacgaaatgacaaagccattataaactcacatatataa-gtggaggtatcggggttcgaac 36752421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 12821302 - 12821227
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  12821302 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 12821227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 21378425 - 21378350
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||   |||||||||||||| ||||||||    
T  21378425 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacata---agtggaggtaccggagttcgaac 21378350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 28758519 - 28758439
Alignment:
Q  127 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||| ||||||| ||||| |||||  ||||  |||  ||||| |||||| | ||||||||||||| |||||||||||    
T  28758519 acttttttttttggtagatagaagagattgcaaagtcattataaactcacacacacaaagtggaggtactggggttcgaac 28758439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 12645293 - 12645364
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  12645293 tttggtagatagacgagatgacaaaaccatcataaacccacacacataaagtggaggtacaggggttcgaac 12645364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 36251783 - 36251712
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| |||||||||||| |||||||||| ||||| |||||| ||||||||||  |||||||||||||||    
T  36251783 tttggtagatagacgagatggcaaaaccatcataaactcacacacataaagtggaaataccggggttcgaac 36251712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 6328183 - 6328240
Alignment:
Q  150 gagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  6328183 gagatgacaaaaccatcataaactcacacacataaagtggaggtatcggggttcgaac 6328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 46021426 - 46021497
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||| |||||| |||| ||||| ||||| |||||| | ||| |||||||||||||||||||||    
T  46021426 tttggtagatagaagagatggcaaagccatcataaactcacacacacaaaatggaggtaccggggttcgaac 46021497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 27396303 - 27396380
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27396303 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27396380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 39580537 - 39580615
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||  ||||| |||||| |||||||||| ||||  |||||| ||||||||||||||| ||| |||||||    
T  39580537 ttttttttttggttgatagaagagatggcaaaaccatcataaaatcacacacataaagtggaggtactgggattcgaac 39580615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 35157074 - 35157150
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  35157074 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 35157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 16842037 - 16842113
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    ||||| ||| ||| |||||||||||   ||||||||| ||||| || ||| |||||||||||||| |||||||||||    
T  16842037 ttttttttttgtagatagacgagatagaaaaaccatcataaactcatacacataaagtggaggtatcggggttcgaa 16842113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 34708811 - 34708736
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||   |||||||||||||||||||||||    
T  34708811 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacata---agtggaggtaccggggttcgaac 34708736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 45957320 - 45957400
Alignment:
Q  127 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||| ||||||| ||||| |||||| ||||  | || |||||  ||||| | |||||||||||||||||||||||||    
T  45957320 acttttttttttggtagatagaagagatgacaaagtcttcataaactaacacacacaaagtggaggtaccggggttcgaac 45957400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 26795053 - 26794974
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 207  Q
    |||||| |||||||  ||||||| ||| |||||||||  ||||| |||||| ||| ||||||||||||||| ||||||||    
T  26795053 ttttttttttggtagttagacgaaatggcaaaaccattataaactcacacacatataagtggaggtaccggagttcgaac 26794974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 4674298 - 4674375
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4674298 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4674375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 8037684 - 8037606
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| || |||| |||||||||||| ||||| |||| ||||| || ||| ||||| ||||||||| || ||||||||    
T  8037684 tttttttttgggtagatagacgagatggcaaaatcatcataaactcatacacataaaatggaggtactggagttcgaac 8037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 8059985 - 8059907
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||| ||| |||||||||||| ||||  |||   |||| |||||||| ||||| |||||||||||||||||||    
T  8059985 tttttttttttgtagatagacgagatgacaaagtcatgacaaactcacacatacaaagttgaggtaccggggttcgaac 8059907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 17895773 - 17895696
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  17895773 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 17895696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 31717436 - 31717359
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||| ||||||||    
T  31717436 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggagttcgaac 31717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 48612656 - 48612579
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||| ||||||||||||||||||    
T  48612656 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtgaaggtaccggggttcgaac 48612579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 41708530 - 41708608
Alignment:
Q  127 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||| ||||||| ||||| ||||||  ||| ||||| ||||| ||||  || |||||||||||| ||||||||||||    
T  41708530 acttttttttttggtagatagaagagatggtaaagccatcataaactcaca--tacaaagtggaggtatcggggttcgaac 41708608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 44836113 - 44836184
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||| |||||| |||| ||||| ||||| |||||||||||||||||| |||||||||||||||    
T  44836113 tttggtagatagatgagatgacaaagccatcataaactcacacatataaagtggagataccggggttcgaac 44836184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 27078687 - 27078610
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| ||| |||| ||| |||||||||| ||||| |||||| |||| ||||||||||||||||||||||    
T  27078687 ttttttttttggtaaataaacgaaatggcaaaaccatcataaactcacacacataa-gtggaggtaccggggttcgaac 27078610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 13048796 - 13048873
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||  ||| |||||||||  ||||| |||||| ||||| |||||||||||||||||||||    
T  13048796 ttttttttttggtagatagacggaatggcaaaaccattataaactcacacacataaa-tggaggtaccggggttcgaac 13048873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 13053793 - 13053870
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||  ||| |||||||||  ||||| |||||| ||||| |||||||||||||||||||||    
T  13053793 ttttttttttggtagatagacggaatggcaaaaccattataaactcacacacataaa-tggaggtaccggggttcgaac 13053870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 15324443 - 15324520
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| || |||| |||||||| ||| |||||||||| ||||| |||||| | || ||||||||||||||||||||||    
T  15324443 tttttttttaggtagatagacgaaatggcaaaaccatcataaactcacacacacaa-gtggaggtaccggggttcgaac 15324520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 48392095 - 48392018
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  48392095 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 48392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 11080964 - 11081027
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||||||| |||||||||| || || || ||| |||||||||||||| ||||||| ||||    
T  11080964 atagacgagatgacaaaaccatcatatactcatacacataaagtggaggtatcggggtttgaac 11081027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 23225286 - 23225356
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  23225286 tttggtatatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 23225356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 27227216 - 27227145
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| |||||||||||| ||||  |||| ||||| || ||| ||||||||||| ||| |||||||||||    
T  27227216 tttggtagatagacgagatggcaaagtcatcctaaactcatacacataaagtggagttacaggggttcgaac 27227145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 8312516 - 8312594
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| ||| | |||||| |||| ||| | ||||| ||| || | |||||||||||||||||||||||||    
T  8312516 ttttttttttggtagataaaagagatggcaaagccaccataaactcactcacacaaagtggaggtaccggggttcgaac 8312594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 13018212 - 13018135
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  |||||  ||||||| || ||||||||||||||||||||||    
T  13018212 ttttttttttggtagatagacgaaatgacaaagccattataaactgacacatacaa-gtggaggtaccggggttcgaac 13018135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 19338167 - 19338244
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  19338167 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 19338244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 47429581 - 47429658
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||||| |||||||    
T  47429581 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacataa-gtggaggtaccgggattcgaac 47429658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 32947758 - 32947682
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| |||||||||||||  | ||| |||||||||| ||||| |||||| ||||||||||| |  ||||||||||||    
T  32947758 tttttttttggtacatagaaaa-atgacaaaaccatcataaactcacacacataaagtggagatgtcggggttcgaac 32947682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 35758413 - 35758337
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| |||  ||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  35758413 tttttttttggtagatagacgaaatggtaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 35758337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 236701 - 236632
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| |||||| ||||| ||||  |||| ||||| ||||||||  ||||| ||||||||||||||||||    
T  236701 tttggtagatagacaagatgacaaagtcatcataaactcacacata--aagtgaaggtaccggggttcgaac 236632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 270312 - 270387
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  270312 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 270387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 8793197 - 8793241
Alignment:
Q  163 catcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||| ||||| |||||| | |||||||||||||||||||||||||    
T  8793197 catcataaactcacacacacaaagtggaggtaccggggttcgaac 8793241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 45458674 - 45458721
Alignment:
Q  159 aaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  45458674 aaaccattgtaaacccacacacataaa-tggaggtatcggggttcgaac 45458721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 816486 - 816408
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||| ||| |||||||||||| |||||||||| ||||| |||||| | |||||||| ||||||||||||||||    
T  816486 tttttttttttgtagatagacgagatggcaaaaccatcataaactcacacacacaaagtggatgtaccggggttcgaac 816408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 22999215 - 22999137
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||||| | |||||||||||  ||||||||||||    
T  22999215 ttttttttttggtagatagacgagatgacaaaaccatcataaactcacacacacaaagtggaggtgtcggggttcgaac 22999137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 22382321 - 22382399
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||| | | |||||||||||  ||||||||||||    
T  22382321 ttttttttttggtagatagacgagatgacaaaaccatcataaactcacatacacaaagtggaggtgtcggggttcgaac 22382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 22914347 - 22914425
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||| |||| | | |||||||||||  ||||||||||||    
T  22914347 ttttttttttggtagatagacgagatgacaaaaccatcataaactcacatacacaaagtggaggtgtcggggttcgaac 22914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 32517805 - 32517884
Alignment:
Q  128 cttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||||| |||||  ||||| ||||  |||| ||||| |||||| | |||||||||||||||||||||||||    
T  32517805 cttttttttttggtagatagataagatggcaaagtcatcataaactcacacacacaaagtggaggtaccggggttcgaac 32517884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 40710830 - 40710901
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| |||||||| ||  |||| ||||| ||||| |||| | | |||||||||||||||||||||||||    
T  40710830 tttggtagatagacgaaattgcaaagccatcataaacacacaaacacaaagtggaggtaccggggttcgaac 40710901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 4014802 - 4014879
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4014802 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4014879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 23497501 - 23497578
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  23497501 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 23497578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 36216742 - 36216819
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36216742 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36216819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 36755087 - 36755010
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36755087 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 40812156 - 40812079
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||| ||||||||||||||||||    
T  40812156 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtgaaggtaccggggttcgaac 40812079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 44948158 - 44948081
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| || ||||||||||||| ||||||||    
T  44948158 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacatacaa-gtggaggtaccggagttcgaac 44948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 31671304 - 31671227
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| |||||||||| | ||||  |||| ||||| |||||||||||||||| |  | |||||||||||    
T  31671304 ttttttttttggtagatagacgagacggcaaagtcatcataaactcacacatataaagtggggtaatcggggttcgaa 31671227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 34667182 - 34667106
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  34667182 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 34667106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 36754731 - 36754807
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36754731 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36754807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 637097 - 637041
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggagg 192  Q
    ||||||| |||||||||||| ||||| |||| ||||| |||||| | ||||||||||    
T  637097 tttggtagatagacgagatggcaaaatcatcataaactcacacacacaaagtggagg 637041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 11100277 - 11100354
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||||||||  |||||||||||| |  ||||||||||||||||||||||||    
T  11100277 ttttttttttggtaaatagacgaaatgacaaaaccattataaacccacacaca-caagtggaggtaccggggttcgaac 11100354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 13403408 - 13403484
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| ||||| ||||||  ||||||||| ||||| |||||| |  ||||||||||||||||||||||||    
T  13403408 ttttttttttggtagatagaagagatggaaaaaccatcataaactcacacaca--aagtggaggtaccggggttcgaac 13403484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 41562583 - 41562504
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | | ||||||||||||||||||||||||    
T  41562583 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacacaagtggaggtaccggggttcgaac 41562504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 24197831 - 24197893
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    ||||| |||||| |||||||||| ||||| |||||| |||||||||||||| ||| |||||||    
T  24197831 atagaagagatgacaaaaccatcataaactcacacacataaagtggaggtatcggagttcgaa 24197893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 36586621 - 36586544
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| || ||||||||||||||||||||||    
T  36586621 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacatacaa-gtggaggtaccggggttcgaac 36586544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 19649489 - 19649564
Alignment:
Q  131 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  19649489 ttttttttggtagatagacgaaatgacaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 19649564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 24242572 - 24242651
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| ||||  ||||||||||  ||||| | | ||||||||||||||||||||||||    
T  24242572 ttttttttttggtagatagacgaaatgacaaagtcatcgtaaactgacacacacacaagtggaggtaccggggttcgaac 24242651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 32778623 - 32778564
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttc 203  Q
    |||||||||||| |||| ||||| |||||||||||| | |||||||||||| ||| ||||    
T  32778623 atagacgagatgacaaagccatcataaacccacacacacaaagtggaggtatcggagttc 32778564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 39709634 - 39709677
Alignment:
Q  151 agatgccaaaaccatcgtaaacccacacatataaagtggaggta 194  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  39709634 agatggcaaaaccatcataaactcacacatataaagtggaggta 39709677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 40418237 - 40418190
Alignment:
Q  160 aaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  40418237 aaccatcataaactcacacacataaagtggaggtatcggggttcgaac 40418190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 42007320 - 42007394
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcg 204  Q
    |||||| ||| ||| |||||||| ||| ||||||||| |||||| |||||| |||| |||||||||||||| ||||    
T  42007320 ttttttttttagtaaatagacgaaatgacaaaaccattgtaaactcacacacataa-gtggaggtaccgggattcg 42007394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 4430724 - 4430801
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4430724 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4430801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 6317439 - 6317362
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  6317439 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 6317362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 25063479 - 25063402
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  25063479 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 25063402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 27817438 - 27817515
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27817438 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27817515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 31639091 - 31639168
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| ||||  |||  |||||||||||| || ||||||||||||||| ||||||||    
T  31639091 ttttttttttggtagatagacgaaatggcaaagtcattataaacccacacacat-aagtggaggtaccggagttcgaac 31639168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 33540292 - 33540226
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtac 195  Q
    |||||| ||||||| |||||||||||| |||| ||||| ||||| |||||||| || |||| |||||    
T  33540292 ttttttttttggtagatagacgagatggcaaagccatcataaactcacacatacaatgtggtggtac 33540226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 34711544 - 34711621
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  34711544 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 34711621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 37295265 - 37295188
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  37295265 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 37295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 11021444 - 11021399
Alignment:
Q  162 ccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||| |||||| | |||||||||||||||||||||||||    
T  11021444 ccatcataaactcacacacacaaagtggaggtaccggggttcgaac 11021399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 27849733 - 27849809
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27849733 tttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27849809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 4977025 - 4977100
Alignment:
Q  131 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4977025 ttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 11109867 - 11109923
Alignment:
Q  151 agatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||| |||| |||||  ||||| ||||||||||| |||||||||||||||    
T  11109867 agatgacaaaatcatcataaactaacacacataaagtggagataccggggttcgaac 11109923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 16501786 - 16501711
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  16501786 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 16501711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 37820883 - 37820947
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggta 194  Q
    ||||| ||||| | ||||| |||||| |||||||||| ||||| |||||| | ||||||||||||    
T  37820883 tttttttttggcagatagaagagatgacaaaaccatcataaactcacacacacaaagtggaggta 37820947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 38953471 - 38953546
Alignment:
Q  131 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  38953471 ttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 38953546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000007; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 9297897 - 9297827
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggg 199  Q
    |||||| || |||| ||||||| |||| |||||||||| ||||| |||||| | |||||||||||||||||    
T  9297897 tttttttttgggtagatagacgggatggcaaaaccatcataaactcacacacacaaagtggaggtaccggg 9297827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 10531525 - 10531448
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| ||||||||  || |||| ||||  ||||| |||||||| |||||||||||||||||||||||||    
T  10531525 ttttttttttggtaaatagacgaagtggcaaagccattataaactcacacata-aaagtggaggtaccggggttcgaac 10531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 31444281 - 31444356
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| ||||||||   |||||||||||||||||||||||    
T  31444281 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacata---agtggaggtaccggggttcgaac 31444356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 1855145 - 1855068
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  1855145 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 1855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 12795008 - 12795085
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||| |||||||||    
T  12795008 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccgcggttcgaac 12795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 735582 - 735507
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  735582 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000007; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 6672380 - 6672303
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  6672380 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 6672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 22792098 - 22792176
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||||||||| || ||| ||||| |||| ||||| |||||| | |||||||||||  ||||||||||||    
T  22792098 ttttttttttggtacatagaagaaatggcaaaatcatcataaactcacacacacaaagtggaggtgtcggggttcgaac 22792176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 23311162 - 23311239
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  23311162 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 23311239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 34856720 - 34856643
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  34856720 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 34856643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 30528122 - 30528045
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| ||||| || |||  ||| ||||||||||| |||||| | ||||||||||| ||||||||||||    
T  30528122 ttttttttttggtagatagaagaaatggtaaagccatcgtaaactcacacacacaaagtggaggtgccggggttcgaa 30528045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 30568462 - 30568385
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| ||||| || |||  ||| ||||||||||| |||||| | ||||||||||| ||||||||||||    
T  30568462 ttttttttttggtagatagaagaaatggtaaagccatcgtaaactcacacacacaaagtggaggtgccggggttcgaa 30568385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 1271222 - 1271159
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||||||| |||||| ||| ||||| |||||||||||| ||||||||  ||| |||||||    
T  1271222 atagacgagatgacaaaacaatcataaactcacacatataaaatggaggtattgggattcgaac 1271159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 8595470 - 8595546
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| ||||| |||||| |||  ||||| |||  || |||||| |||||||||||||||||||||||||    
T  8595470 ttttttttttggtagatagaagagatggcaatgccatcataa--cctcacatacaaagtggaggtaccggggttcgaac 8595546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 16496740 - 16496662
Alignment:
Q  128 cttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  16496740 cttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 16496662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 25328292 - 25328370
Alignment:
Q  128 cttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  25328292 cttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 25328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 42645452 - 42645531
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| | |||||||||||||| |||||||||    
T  42645452 ttttttttttggtagatagacgaaatgacaaagccattataaactcacacatacataagtggaggtaccgaggttcgaac 42645531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1244170 - 1244247
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||||||||||  | ||||||||||||| ||||||||||    
T  1244170 ttttttttttggtagatagacgatatggcaaagccattataaacccacaca-ctcaagtggaggtaccagggttcgaac 1244247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 4165098 - 4165021
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4165098 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4165021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 9640530 - 9640599
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||||||||||||    
T  9640530 tttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaa 9640599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 17869113 - 17869190
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||  |||||| |||| ||||||||||||||||||||||    
T  17869113 ttttttttttggtagatagacgaaatggcaaagccattataaattcacacacataa-gtggaggtaccggggttcgaac 17869190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 18625604 - 18625681
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||||| || |||||||||| |||||||||||    
T  18625604 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacatacaa-gtggaggtactggggttcgaac 18625681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 23074633 - 23074710
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  23074633 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 23074710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 26266988 - 26267066
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | | |||||||||||||||||||||||    
T  26266988 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaa 26267066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 26802473 - 26802396
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  26802473 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 26802396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 26810023 - 26809946
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  26810023 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 26809946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 26825050 - 26824973
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  26825050 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 26824973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 27389916 - 27389993
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||| |||||||||    
T  27389916 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccgaggttcgaac 27389993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 34930364 - 34930287
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  34930364 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 34930287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 36569418 - 36569341
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36569418 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36569341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 36790304 - 36790381
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36790304 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36790381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 36854147 - 36854224
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  36854147 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 36854224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 37191376 - 37191307
Alignment:
Q  136 tttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||| |||||||||||||||||||||    
T  37191376 tttggtagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaa 37191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 39150915 - 39150992
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  39150915 ttttttttttggtagatagacgaaatgtcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 39150992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 42448350 - 42448273
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  42448350 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 42448273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 10393492 - 10393568
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  10393492 tttttttttggtagatagacgaaatgacaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 10393568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 26526632 - 26526575
Alignment:
Q  150 gagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||  |||| ||||| |||||| |||||||||||||||||| ||||||||    
T  26526632 gagatggcaaattcatcataaactcacacacataaagtggaggtaccggagttcgaac 26526575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 39528069 - 39527994
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |   |||||||||||||||||||||||    
T  39528069 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacaca---agtggaggtaccggggttcgaac 39527994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 41215225 - 41215297
Alignment:
Q  131 ttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttc 203  Q
    |||| ||||||| || ||||||||| |||||| ||| ||||| || | | |||||||||||||| ||||||||    
T  41215225 ttttttttggtagattgacgagatgacaaaactatcataaactcatatacataaagtggaggtatcggggttc 41215297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000007; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 47069146 - 47069069
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  47069146 ttttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 47069069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 21129188 - 21129108
Alignment:
Q  127 acttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||| ||| ||||||| |||||| ||||| |||| ||||| ||||| |||| | | ||||| |||||||||||||||||||    
T  21129188 acttctttttttggtagatagacaagatggcaaagccatcataaactcacaaacacaaagtagaggtaccggggttcgaac 21129108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 2096572 - 2096651
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | | ||||||||||||||||||||||||    
T  2096572 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaac 2096651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 29212052 - 29212131
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatata-aagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | | ||||||||||||||||||||||||    
T  29212052 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtaccggggttcgaac 29212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 31828538 - 31828462
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| ||||| |||||| |||||||||| ||||| |||||| |  |||||||||| |||| ||||||||    
T  31828538 ttttttttttggtagatagaagagatggcaaaaccatcataaacacacacaca--aagtggaggtgccggagttcgaac 31828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 1242356 - 1242279
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  1242356 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 1242279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 3440865 - 3440788
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  3440865 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 3440788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 3917905 - 3917828
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  3917905 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 3917828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 4232166 - 4232243
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  4232166 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 4232243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 5998771 - 5998848
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  5998771 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 5998848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 8128279 - 8128356
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  8128279 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 8128356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 10229096 - 10229019
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  10229096 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 10229019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 11029803 - 11029726
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  11029803 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 11029726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 15003767 - 15003690
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| |||  ||||||||||||||||||||||    
T  15003767 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacatag-gtggaggtaccggggttcgaac 15003690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 24910277 - 24910354
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  24910277 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 24910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 27002729 - 27002806
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||| ||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||||||||||||||||    
T  27002729 tttttttttttgtagatagacgaaatgacaaaaccattataaactcacacacacaa-gtggaggtaccggggttcgaac 27002806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 32960967 - 32961044
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  32960967 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 32961044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 48555975 - 48555898
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  48555975 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 48555898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 19163773 - 19163697
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || |||||||||||||||||||||    
T  19163773 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaa 19163697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 37278525 - 37278590
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtac 195  Q
    ||||| ||| ||| |||||||||||| ||||  |||| ||||| |||||||| |||||||||||||    
T  37278525 ttttttttttgtagatagacgagatgacaaagtcatcataaactcacacatacaaagtggaggtac 37278590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 43897952 - 43898028
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaa 206  Q
    |||||| ||||||| |||||||| ||| ||||  ||| |||||| |||||| | || |||||||||||||||||||||    
T  43897952 ttttttttttggtagatagacgaaatggcaaagtcattgtaaactcacacacacaa-gtggaggtaccggggttcgaa 43898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 45475222 - 45475298
Alignment:
Q  130 tttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    ||||| ||||||| |||||||| ||| |||||||||  ||||| |||||| | || ||||||||| ||||||||||||    
T  45475222 tttttttttggtagatagacgaaatggcaaaaccattataaactcacacacacaa-gtggaggtatcggggttcgaac 45475298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 23045 - 22984
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcga 205  Q
    ||||||| |||| |||||||||| ||||| || ||| | |||||||||||||||||||||||    
T  23045 atagacgggatgacaaaaccatcataaactcaaacacacaaagtggaggtaccggggttcga 22984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 22207 - 22144
Alignment:
Q  144 atagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||||||||| ||||  |||| ||||| |||||| | |||||||||||| ||||||||||||    
T  22207 atagacgagatgacaaagtcatcataaactcacacacacaaagtggaggtatcggggttcgaac 22144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 2617 - 2540
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| |||| || |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  2617 ttttttttttgatagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1230 - 1307
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| ||||||| |||||||| ||| |||| ||||  ||||| |||||| | || ||||||||||||||||||||||    
T  1230 ttttttttttggtagatagacgaaatggcaaagccattataaactcacacacacaa-gtggaggtaccggggttcgaac 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 2617 - 2540
Alignment:
Q  129 ttttttgtttggtacatagacgagatgccaaaaccatcgtaaacccacacatataaagtggaggtaccggggttcgaac 207  Q
    |||||| |||| || |||||||| ||| |||| ||||  ||||| |||||| |||| ||||||||||||||||||||||    
T  2617 ttttttttttgatagatagacgaaatggcaaagccattataaactcacacacataa-gtggaggtaccggggttcgaac 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0879
Description:

Target: scaffold0879; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 3542 - 3478
Alignment:
Q  19 ttataaataagcaaaattatgtcttatgctataacttttgtgccactattgtcaatgaattaataa 84  Q
    ||||||| |||||||| ||| | |||||||||| |||| ||| ||||||| |||||||||||||||    
T  3542 ttataaaaaagcaaaagtatcttttatgctatagcttt-gtgtcactattttcaatgaattaataa 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University