View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8831_high_4 (Length: 345)
Name: NF8831_high_4
Description: NF8831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8831_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 51814750 - 51815082
Alignment:
| Q |
1 |
tggttcagaagcatcaaggtctgtggaattatcaagttcaccttatgcaagggatcaaatattttcaactggaattcttgcaatttaaccatcgattatt |
100 |
Q |
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| T |
51814750 |
tggttcagaagcatcaaggtctgtggaattatcaagttcaccttatgcaagggatcaaatattttcaactggaattcttgcaatttaaccatcgattatt |
51814849 |
T |
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| Q |
101 |
ggtatcaaactttggccgtggaaaatcaataatccagagattgatactattaagtacataatatacggctatactatgattaactgtatgttatatttaa |
200 |
Q |
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| T |
51814850 |
ggtatcaaactttggccgtggaaaatcaataatccagagattgatactattaagtacataatatacggctatactatggttaactgtatgttatatttaa |
51814949 |
T |
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| Q |
201 |
ttatatgagaattaagatagatagctcgatcgtaaccaaaacaaaaattttgatgagaaataatcagagagaagatgtattttgatgtacttttccttta |
300 |
Q |
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| T |
51814950 |
ttatatgagaattaagatagatagctcgatcgtaaccaaaacaaaaattttgatgagaaataatcagagagaagatgtattttgatgtacttttccttta |
51815049 |
T |
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| Q |
301 |
tgccaatcccaagaaggaattacgaattatgat |
333 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
51815050 |
tgccaatcccaagaaggaattacgaattatgat |
51815082 |
T |
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