View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8832_low_4 (Length: 249)
Name: NF8832_low_4
Description: NF8832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8832_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 43901685 - 43901909
Alignment:
| Q |
7 |
agattatacttcctgttttaaggatatcacgtaactatggcggtgtaatgctgtggacaacacactatgataaacaaagtggatacagcaactacataaa |
106 |
Q |
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| T |
43901685 |
agattgtagttcctgttttaaggatatcgcgtaactatggcggtgtaatgctgtggacaacacactatgataaacaaagtggatacagcaactacataaa |
43901784 |
T |
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| Q |
107 |
aagttctctatgcacacaacaaaagtctcctgaatgtggaggaaattattattgtcgccacaaaggttctttttatagactaaacttggtcgtagttctc |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
43901785 |
aagttctctatgcacacaacaaaagtctcctgaatgtggaggaaattattattgtagccacacaggttctttttatagactaaacttggtcgtagttctc |
43901884 |
T |
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| Q |
207 |
tggaaacactttttactattgtgag |
231 |
Q |
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||||||||||||||||||||||||| |
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| T |
43901885 |
tggaaacactttttactattgtgag |
43901909 |
T |
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