View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8841_low_40 (Length: 213)

Name: NF8841_low_40
Description: NF8841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8841_low_40
NF8841_low_40
[»] chr3 (19 HSPs)
chr3 (10-201)||(25191122-25191313)
chr3 (10-195)||(38849843-38850028)
chr3 (10-199)||(28245182-28245371)
chr3 (10-191)||(52138553-52138734)
chr3 (10-173)||(5168599-5168762)
chr3 (10-199)||(47542060-47542248)
chr3 (10-198)||(51448057-51448245)
chr3 (10-177)||(53519353-53519520)
chr3 (10-201)||(27917315-27917506)
chr3 (24-199)||(3186514-3186689)
chr3 (115-201)||(30345270-30345356)
chr3 (10-123)||(43695113-43695226)
chr3 (10-93)||(33272376-33272459)
chr3 (10-113)||(54278851-54278954)
chr3 (77-201)||(29817247-29817371)
chr3 (10-201)||(26490060-26490251)
chr3 (115-201)||(54425359-54425445)
chr3 (120-193)||(50632286-50632359)
chr3 (137-201)||(48221527-48221591)
[»] chr7 (27 HSPs)
chr7 (10-199)||(38606750-38606939)
chr7 (10-201)||(43281419-43281610)
chr7 (10-199)||(11593705-11593894)
chr7 (10-199)||(31004968-31005157)
chr7 (10-203)||(32630336-32630529)
chr7 (10-199)||(33072699-33072888)
chr7 (10-199)||(33350154-33350343)
chr7 (10-199)||(36651739-36651928)
chr7 (10-199)||(36869637-36869826)
chr7 (16-199)||(39906729-39906916)
chr7 (10-199)||(34869165-34869354)
chr7 (40-199)||(46356229-46356388)
chr7 (10-199)||(35906549-35906738)
chr7 (10-181)||(49029044-49029210)
chr7 (10-201)||(7272783-7272973)
chr7 (72-195)||(37616665-37616788)
chr7 (10-160)||(12841623-12841773)
chr7 (100-201)||(48919131-48919232)
chr7 (26-181)||(23404181-23404336)
chr7 (18-89)||(28628286-28628357)
chr7 (25-85)||(15681216-15681276)
chr7 (151-201)||(21517814-21517864)
chr7 (10-199)||(25579419-25579613)
chr7 (10-65)||(37617823-37617878)
chr7 (52-182)||(7189623-7189752)
chr7 (160-193)||(418907-418940)
chr7 (125-201)||(33139014-33139090)
[»] chr2 (22 HSPs)
chr2 (10-201)||(11992454-11992645)
chr2 (10-202)||(41197576-41197768)
chr2 (10-198)||(3865818-3866006)
chr2 (10-198)||(45367972-45368160)
chr2 (11-199)||(2610273-2610461)
chr2 (16-199)||(451976-452159)
chr2 (10-201)||(41763389-41763588)
chr2 (10-199)||(8180525-8180714)
chr2 (10-199)||(4807337-4807526)
chr2 (18-199)||(3244007-3244188)
chr2 (10-167)||(23997394-23997551)
chr2 (10-199)||(24583954-24584143)
chr2 (40-201)||(6238132-6238292)
chr2 (101-199)||(38453059-38453157)
chr2 (10-201)||(30743366-30743557)
chr2 (10-131)||(36183264-36183385)
chr2 (10-128)||(38429700-38429818)
chr2 (40-148)||(12734502-12734609)
chr2 (115-201)||(13149056-13149142)
chr2 (10-148)||(16097338-16097480)
chr2 (31-87)||(32443471-32443527)
chr2 (10-79)||(36039088-36039157)
[»] chr6 (17 HSPs)
chr6 (10-201)||(9706519-9706710)
chr6 (10-203)||(607900-608093)
chr6 (24-208)||(5258512-5258696)
chr6 (10-201)||(5631561-5631752)
chr6 (10-192)||(14030558-14030740)
chr6 (10-201)||(10100205-10100396)
chr6 (10-201)||(20427984-20428175)
chr6 (22-198)||(30679220-30679396)
chr6 (10-201)||(2689399-2689590)
chr6 (10-200)||(33495941-33496118)
chr6 (25-190)||(6056133-6056298)
chr6 (10-123)||(28085197-28085310)
chr6 (11-201)||(2065105-2065296)
chr6 (16-119)||(30031081-30031184)
chr6 (10-78)||(35043789-35043857)
chr6 (40-135)||(24631132-24631227)
chr6 (16-92)||(21870488-21870564)
[»] chr1 (32 HSPs)
chr1 (10-201)||(32083093-32083284)
chr1 (10-199)||(30202478-30202667)
chr1 (10-189)||(8391525-8391706)
chr1 (11-200)||(22089838-22090027)
chr1 (18-200)||(8671664-8671846)
chr1 (10-199)||(1210490-1210679)
chr1 (10-199)||(9592479-9592668)
chr1 (10-199)||(43240729-43240918)
chr1 (10-199)||(49347741-49347930)
chr1 (10-199)||(51441113-51441301)
chr1 (10-199)||(51601803-51601992)
chr1 (10-144)||(696069-696203)
chr1 (10-150)||(15085728-15085868)
chr1 (52-201)||(19936265-19936414)
chr1 (10-185)||(9599742-9599917)
chr1 (42-201)||(34827482-34827641)
chr1 (52-201)||(37463257-37463404)
chr1 (17-79)||(3192071-3192133)
chr1 (17-79)||(3200889-3200951)
chr1 (17-79)||(3209726-3209788)
chr1 (104-201)||(27445641-27445738)
chr1 (10-195)||(46226630-46226815)
chr1 (10-82)||(34792697-34792768)
chr1 (60-172)||(52831830-52831942)
chr1 (75-201)||(32404941-32405068)
chr1 (10-148)||(39140310-39140447)
chr1 (152-201)||(32066761-32066810)
chr1 (10-67)||(32231302-32231359)
chr1 (61-94)||(7921777-7921810)
chr1 (29-57)||(4001820-4001848)
chr1 (10-86)||(26016295-26016371)
chr1 (157-193)||(51234365-51234401)
[»] chr8 (23 HSPs)
chr8 (10-201)||(42854352-42854543)
chr8 (11-199)||(36565590-36565778)
chr8 (10-199)||(39946602-39946791)
chr8 (10-201)||(15215619-15215810)
chr8 (10-198)||(12492190-12492378)
chr8 (10-201)||(25299980-25300171)
chr8 (16-200)||(18124920-18125103)
chr8 (10-200)||(36544896-36545081)
chr8 (10-184)||(25288662-25288836)
chr8 (74-201)||(4032907-4033033)
chr8 (10-201)||(37077508-37077699)
chr8 (16-133)||(18752227-18752344)
chr8 (10-152)||(36395298-36395443)
chr8 (10-173)||(2796326-2796489)
chr8 (87-201)||(25439279-25439393)
chr8 (16-199)||(8879794-8879971)
chr8 (72-201)||(13984777-13984906)
chr8 (89-193)||(6510843-6510948)
chr8 (120-183)||(10824546-10824609)
chr8 (150-209)||(28300596-28300655)
chr8 (137-194)||(13589190-13589247)
chr8 (137-201)||(30113671-30113735)
chr8 (129-201)||(44681543-44681615)
[»] chr4 (33 HSPs)
chr4 (10-201)||(27450521-27450712)
chr4 (10-199)||(23906649-23906838)
chr4 (10-199)||(31960162-31960351)
chr4 (10-200)||(435973-436163)
chr4 (10-199)||(43433663-43433852)
chr4 (10-199)||(53707539-53707728)
chr4 (10-199)||(33226954-33227143)
chr4 (10-201)||(1211738-1211929)
chr4 (10-199)||(46583172-46583361)
chr4 (10-199)||(48174441-48174630)
chr4 (10-199)||(56375035-56375224)
chr4 (10-200)||(1777363-1777553)
chr4 (16-199)||(50286716-50286899)
chr4 (10-192)||(47265550-47265735)
chr4 (25-197)||(39708204-39708377)
chr4 (74-199)||(48622939-48623064)
chr4 (25-201)||(16002671-16002846)
chr4 (18-135)||(52569871-52569988)
chr4 (10-201)||(55578777-55578965)
chr4 (10-197)||(41009698-41009888)
chr4 (10-201)||(35690048-35690238)
chr4 (10-109)||(11389555-11389654)
chr4 (10-69)||(12494625-12494684)
chr4 (10-97)||(31458875-31458962)
chr4 (10-69)||(33191196-33191255)
chr4 (64-182)||(54914591-54914708)
chr4 (10-87)||(1793317-1793394)
chr4 (10-94)||(45205196-45205280)
chr4 (16-67)||(27983077-27983128)
chr4 (10-209)||(7092567-7092759)
chr4 (16-84)||(26037836-26037904)
chr4 (10-78)||(39100881-39100949)
chr4 (18-113)||(4440687-4440781)
[»] chr5 (20 HSPs)
chr5 (10-199)||(12492735-12492924)
chr5 (10-199)||(2075822-2076011)
chr5 (16-199)||(28977211-28977394)
chr5 (10-199)||(1275010-1275199)
chr5 (36-201)||(3301592-3301757)
chr5 (10-199)||(10639042-10639231)
chr5 (10-199)||(1287937-1288126)
chr5 (10-199)||(34272767-34272956)
chr5 (10-199)||(20318736-20318921)
chr5 (72-201)||(3394453-3394585)
chr5 (10-152)||(16347726-16347868)
chr5 (10-199)||(24178269-24178444)
chr5 (10-201)||(36200525-36200716)
chr5 (30-201)||(27637-27808)
chr5 (61-195)||(17340871-17341005)
chr5 (138-201)||(16347879-16347941)
chr5 (11-49)||(16454606-16454644)
chr5 (118-182)||(16779444-16779508)
chr5 (62-193)||(3096927-3097057)
chr5 (161-201)||(27302449-27302489)
[»] scaffold0570 (1 HSPs)
scaffold0570 (10-200)||(2618-2808)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-199)||(31213-31394)
[»] scaffold0024 (1 HSPs)
scaffold0024 (10-201)||(82464-82655)
[»] scaffold0113 (1 HSPs)
scaffold0113 (10-199)||(11946-12135)
[»] scaffold1493 (1 HSPs)
scaffold1493 (106-184)||(29-107)
[»] scaffold0157 (1 HSPs)
scaffold0157 (18-69)||(25801-25852)


Alignment Details
Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 25191313 - 25191122
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  25191313 acatcctcatctctgctacacttactttactctcgtgttgactcttaacagcccaacactctgtaccatacaacatttccggtctgactattgttcgata 25191214  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  25191213 gaaccttcctttcaacttaagtggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgatgat 25191122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 38850028 - 38849843
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||| | |||| ||||| ||||||||||    
T  38850028 acatcctcatctctgctacacttacttgattctcgtgttgactcttaaccgcccaacactttgtaccatacaacatcgtcggtgtgactgttgtccgata 38849929  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatac 195  Q
     ||  || |||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38849928 aaaaatttctttcaacttaagtggtactttgttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatac 38849843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 28245371 - 28245182
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||| |||||||||||||| | |||| |||||||| |||| |||||||||||  ||||| |||||||  ||||||||||||  |||||||||    
T  28245371 acatcctcatctttgctacacttacttaattctcatgttgacttttaaccgcccaacactccgtaccgtacaacaacgccggtctgactgctgtccgata 28245272  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  28245271 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacaactgagactcttctccatttcaaccacccagcttgaatacgatg 28245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 52138734 - 52138553
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| | ||||||||||| |||||||||||| |||||||||||||  ||||||| ||||  |||||||||    
T  52138734 acatcctcatctctgctacacttacttgattctcatcttgactcttaaccgcccaacacttcgtaccatacaacaacgccggtcggactgctgtccgata 52138635  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttga 191  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  52138634 gaactttcctttcaacttaagtggtattttcttatcgcacaagacacctgagactcttctccatttcaaccacccagcttga 52138553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 5168762 - 5168599
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||||| |||||| ||||  ||||||||||||||||||||||||||| ||||||||||    
T  5168762 acatcctcatctccgctacacttactttactctcatgttggctcttaaccgcccagcactccgtaccatacaacattgccggtctgactgttgtccgata 5168663  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccat 173  Q
    |||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  5168662 gaattttcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccat 5168599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 47542060 - 47542248
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||| ||| | |||| |||||||||||||  ||||||||||  |||||||||||||  ||||||| |||   |||||||||    
T  47542060 acatcctcatctctgctacactttctt-attctcatgttgactcttaactgcccaacactccgtaccatacaacaacgccggtcagaccgctgtccgata 47542158  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  47542159 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatg 47542248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 51448057 - 51448245
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||||||||||||| || | |||| ||||||||||||| |||| ||||||  |||||||||||||  | ||||| ||||  |||||||||    
T  51448057 acatcctcatctctgctacacttagttgattctcatgttgactcttaaccgcctaacactccgtaccatacaacaacgtcggtcggactgctgtccgata 51448156  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgat 198  Q
     ||| ||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  51448157 taactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgat 51448245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 177
Target Start/End: Complemental strand, 53519520 - 53519353
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| || |||||||| ||||||||||||||||| ||||||| |||  ||||||  |||| | |||||||||||| |||||||  |||||||||    
T  53519520 acatcctcatttccgctacactaactttactctcgtgttggctcttaaccgcttaacactccgtacaacacaacattgccgatctgactgctgtccgata 53519421  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttca 177  Q
    ||   ||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  53519420 gatttttcctttaagcttaagtgatactttcttatcgcacaaaacacctgaggctcttctccatttca 53519353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 27917506 - 27917315
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||| ||||||| | |||||| |||  ||||||  || || |||||||||||||||||||| |||||| |||||  ||| |||||    
T  27917506 acatcctcatctctgctacgcttacttgattctcgttttggttcttaactgcacatcactttgtaccatacaacatcgccggtgtgactgatgttcgata 27917407  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  || | |||| ||||||||||| ||| ||||| || ||||||  ||||||||||||| |||||| | ||||| |||||||||||||||    
T  27917406 gaatttttcattcaacttaagtggtacttttttatcacataaaacacatgaggctcttctctatttcagctacccaacttgaatacgatgat 27917315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 3186689 - 3186514
Alignment:
Q  24 gctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttca 123  Q
    |||||| |||||| | |||||||||||||||||| ||||||||||| | || |||||||||| |  |||  |||| |||||||||| ||| |||||||||    
T  3186689 gctacatttacttgattctcgtgttgactcttaatcgcccaacactatatatcatacaacatcgttggtgggactgttgtccgatataactttcctttca 3186590  T
Q  124 gcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
     |||||||| || ||||||||| |  ||||||  |||   | |||| ||||||||||||||| |||||||||||||    
T  3186589 acttaagtgatactttcttatcacctaaaacacatgaaaatattcttcatttcaaccacccaacttgaatacgatg 3186514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 30345356 - 30345270
Alignment:
Q  115 ttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||  ||||| |||| |||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||| |||||    
T  30345356 ttcctttcaatttaagcggtactttcttatcgcataaaacacctgagactcttctccatttcaaccacccaacttgaatactatgat 30345270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 43695113 - 43695226
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||| ||||||||||| | ||||||||| | ||| || | |||||||||  |||||||||||||| |||||||| |||  |||||||||    
T  43695113 acatcctcatctctgttacacttacttgattctcgtgttaattctcaaccacccaacactccgtaccatacaacatcgccggtctaactgctgtccgata 43695212  T
Q  110 gaaccttcctttca 123  Q
    |||| || ||||||    
T  43695213 gaacttttctttca 43695226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 33272376 - 33272459
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtc 93  Q
    ||||| ||||||||||||||||||||| | |||| |||||||||||||  ||||||||||  |||||||||||||  |||||||    
T  33272376 acatcctcatctctgctacacttacttgattctcatgttgactcttaactgcccaacactccgtaccatacaacaacgccggtc 33272459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 54278954 - 54278851
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||| | | |||  |||||||||||||  ||||||||||  |||||||||||||  || |||||||||  |||||||||    
T  54278954 acatcctcatctctgctacacttacctgattcttatgttgactcttaactgcccaacactccgtaccatacaacaacgctggtctgactgctgtccgata 54278855  T
Q  110 gaac 113  Q
    ||||    
T  54278854 gaac 54278851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 29817371 - 29817247
Alignment:
Q  77 atacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttc 176  Q
    ||||||||||  |||||| ||| ||||||| |||||  || |||||| |||||| | || ||||||||| || |||||||   || || ||||| |||||    
T  29817371 atacaacattatcggtctaactgttgtccggtagaaattttctttcaacttaagcgttactttcttatcacataaaacataacagactattctctatttc 29817272  T
Q  177 aaccacccagcttgaatacgatgat 201  Q
    ||||||||| |||||||||||||||    
T  29817271 aaccacccaacttgaatacgatgat 29817247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 26490251 - 26490060
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccat--acaacattgccggtctgactattgtccga 107  Q
    ||||| ||||||| ||||||||||||| | |||| |||||  |||||| ||||||||| |   ||||||  ||||||| |||||||||||| ||||||||    
T  26490251 acatcctcatctccgctacacttacttgattctcttgttggttcttaaccgcccaaca-tacttaccatacacaacatcgccggtctgactgttgtccga 26490153  T
Q  108 tagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    || ||  ||||||| |  ||||| |||||||||| ||  || ||||| ||| ||||| |||| ||| |||||||| || ||| |||| ||||||    
T  26490152 tataattttcctttaaatttaagcggtattttctcattacataaaac-tctaaggctattcttcatctcaaccactcaacttcaatatgatgat 26490060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 54425359 - 54425445
Alignment:
Q  115 ttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||| || ||||||||||| ||||||||| |||||||||  |||| ||||| | |||||||||| || ||||| |||||||||||    
T  54425359 ttccttccaacttaagtggtactttcttatcacacaaaacacatgagactctttttcatttcaaccgcctagcttaaatacgatgat 54425445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 50632286 - 50632359
Alignment:
Q  120 ttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaat 193  Q
    |||| ||| ||||||| ||||| ||| || ||||||| | |||| || ||||||||||||||||||| ||||||    
T  50632286 ttcaacttgagtggtactttctcatcacataaaacatttaaggcactcctccatttcaaccacccaggttgaat 50632359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 48221591 - 48221527
Alignment:
Q  137 tttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| |||| ||||||||||  |||| |||||| ||||||||||| |||| |||||| |||||||    
T  48221591 tttcgtatcacacaaaacattggaggttcttcttcatttcaaccatccagtttgaattcgatgat 48221527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 4e-77; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 38606939 - 38606750
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  38606939 acattatcatctccgctacacttactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattgccggtctgactgttgtccgata 38606840  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  38606839 gaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatg 38606750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 43281610 - 43281419
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||| | ||||||||||||||||||| | |||| ||||||| ||||||||||| |||||||||||||||||||||| |||||  |||||||||    
T  43281610 acatcctcatccccgctacacttactttactcttgcgttggctcttaaccgcccaacactctgtaccatacaacattgccggtttgactgctgtccgata 43281511  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  43281510 gaactttcctttcagcttaagtggtactttcttatcgcacaaaacgcctgaggctcttctccatttcaaccacccagcttgaatacgatgat 43281419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 11593894 - 11593705
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| || ||||||||  |||||||||||||  |||||||  ||| ||||||||||    
T  11593894 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgtccaacactccgtaccatacaacaacgccggtcgaactgttgtccgata 11593795  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11593794 gaactttcctttcaacttaagtggtacttttttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 11593705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 31005157 - 31004968
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||| ||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  31005157 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcctaacactccgtaccatacaacaacgccggtcggactgctgtccgata 31005058  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  31005057 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgatg 31004968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 32630529 - 32630336
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||||||||||||||||||||||  |||||| |||||| ||||  |||||||||||||||| |||||||| |  |||||||||    
T  32630529 acatcctcatctccgctacacttactttactctcgtgttggttcttaaccgcccagcactccgtaccatacaacattgtcggtctgattgatgtccgata 32630430  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgatgt 203  Q
    |||| |||||||||||||||||| || |||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||    
T  32630429 gaactttcctttcagcttaagtgatactttcttatcgcacaaaacactcgaggctcttctccatttcaactacccagcttgaatacgatgatgt 32630336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 33072888 - 33072699
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||| ||||||||||| ||||||||||||||  |||||||| ||| ||||||||||    
T  33072888 acatcatcatctctgctacacttatttgattctcatgttgactcttaaccgcccaacactctgtaccatacaacaacgccggtctaactgttgtccgata 33072789  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||| | ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||    
T  33072788 gaactttccttttaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccatccaacttgaatacgatg 33072699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 33350154 - 33350343
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  33350154 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgctgtccgata 33350253  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||| ||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  33350254 gaactttcctgtcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatg 33350343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 36651928 - 36651739
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||| ||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| || |  |||||||||    
T  36651928 acatcctcatctctgttacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggattgctgtccgata 36651829  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36651828 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 36651739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 36869637 - 36869826
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | || ||||||||||||||  ||| ||||| |  |||||||||||||| ||||| |||||| ||||||||||    
T  36869637 acatcctcatctctgctacacttacttgattcacgtgttgactcttagtcgctcaacattccgtaccatacaacatcgccggcctgactgttgtccgata 36869736  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  36869737 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacccctgaggctcttctccatttcaaccacccagcttgaatacgatg 36869826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 39906729 - 39906916
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||||||||||||||||| | |||| ||||||||||||| |||| ||||||  |||||||||||||  ||||||||||||  ||||||||||||| |    
T  39906729 tcatctctgctacacttacttgattctcatgttgactcttaatcgcctaacactccgtaccatacaacaacgccggtctgactgctgtccgatagaactt 39906828  T
Q  116 tcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccattt----caaccacccagcttgaatacgatg 199  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  39906829 tcctttcaacttaagtggtactttcttatcgcacaaaacatctgaggctcttctccatttcaaccaaccacccagcttgaatacgatg 39906916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 34869354 - 34869165
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||| |||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||||||||  |||||||||    
T  34869354 acatcctcatctctactacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgactgctgtccgata 34869255  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||||    
T  34869254 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacgcctgaggctcttctccaattcaaccacccagcttgaatatgatg 34869165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 46356229 - 46356388
Alignment:
Q  40 tctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtatttt 139  Q
    |||| ||||||||||||| |||||||||||  ||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||| ||| |||    
T  46356229 tctcatgttgactcttaaccgcccaacactccgtaccatacaacaatgccggtctgactactgtccgatagaactttcctttcaacttaagtagtacttt 46356328  T
Q  140 cttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  46356329 cttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgatg 46356388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 35906549 - 35906738
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| | |||||||||  ||| |||||||||  ||||||| ||||  |||||||||    
T  35906549 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccacccaacactccgtatcatacaacaacgccggtcggactgctgtccgata 35906648  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||    
T  35906649 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaagatcttctccatttcaaccacccagcttgaatacgatg 35906738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 49029210 - 49029044
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||   |||||  ||||  |||||||||    
T  49029210 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacaccggttggactgctgtccgata 49029111  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaacca 181  Q
    |||| |||||||||     ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49029110 gaactttcctttca-----agtggtattttcttatcgcacaaaacacctgaggctcttctccatttcaacca 49029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 7272973 - 7272783
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| | ||||||||||| | |||||||||| |||| || ||||||||||| |||| |||||||||||| |||| |||||  || ||||||    
T  7272973 acatcctcatctccggtacacttacttgattctcgtgttggctctcaaccgcccaacactctgtatcatacaacattgtcggtttgactgctgaccgata 7272874  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
     ||| ||||| ||| ||||||||||| ||||||||| ||||||| | |||||||| ||||| || |||||||||||||||||||||||||||    
T  7272873 caactttcctctcaacttaagtggtactttcttatcacacaaaatacctgaggct-ttctcaatctcaaccacccagcttgaatacgatgat 7272783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 37616788 - 37616665
Alignment:
Q  72 gtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctcc 171  Q
    ||||||||||||| || ||||||||||  || |||||| ||| ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||    
T  37616788 gtaccatacaacaatgtcggtctgactgctggccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctcc 37616689  T
Q  172 atttcaaccacccagcttgaatac 195  Q
    ||||||||||||||||||||||||    
T  37616688 atttcaaccacccagcttgaatac 37616665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 160
Target Start/End: Original strand, 12841623 - 12841773
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| | |||||||||  |||||||||||||  ||||||| ||||  ||| |||||    
T  12841623 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccacccaacactccgtaccatacaacaacgccggtcagactgctgtacgata 12841722  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctga 160  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  12841723 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctga 12841773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 48919232 - 48919131
Alignment:
Q  100 ttgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  48919232 ttgtccgatataaccttcctttcaacttaaggggtactttcttatcgcacaaaacacctgaggctcttctccatttcaactacccagcttgaatacgatg 48919133  T
Q  200 at 201  Q
    ||    
T  48919132 at 48919131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 23404336 - 23404181
Alignment:
Q  26 tacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagc 125  Q
    ||||||||||| | ||||||| || || |||| ||||||| |||| ||||||||||| || | |||||||||| |||||||||||||  ||||||||| |    
T  23404336 tacacttacttgattctcgtgctggcttttaaccgcccaaaacttcgtaccatacaatatcgtcggtctgactgttgtccgatagaattttcctttcaac 23404237  T
Q  126 ttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaacca 181  Q
    |||||||||  ||||||||| || |||||| ||||||||||||||||||| |||||    
T  23404236 ttaagtggtcctttcttatctcagaaaacacctgaggctcttctccattttaacca 23404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 28628286 - 28628357
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgcc 89  Q
    ||||||||||| ||||||||| ||||||||||  ||| || ||||||||||||||| |||||||||||||||    
T  28628286 atctctgctacgcttactttattctcgtgttggttctcaaccgcccaacactttgttccatacaacattgcc 28628357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 15681276 - 15681216
Alignment:
Q  25 ctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacat 85  Q
    |||||||||||| | |||||||||| ||||||| ||||||||||| | |||||||||||||    
T  15681276 ctacacttacttgagtctcgtgttggctcttaaccgcccaacactctataccatacaacat 15681216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 21517814 - 21517864
Alignment:
Q  151 aaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| ||||||    
T  21517814 aaacatctaaggctcttctcgatttcaaccacccaacttgaatatgatgat 21517864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 25579419 - 25579613
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||  |||| |||| |||| ||||||||||  |||||| ||||||||| |  || ||||||||||| |||||||| ||   |||||||||    
T  25579419 acatcctcatctcctctacgcttattttattctcgtgttggttcttaaccgcccaacattccgttccatacaacatcgccggtcttacagctgtccgata 25579518  T
Q  110 gaaccttcctttcagcttaagtg---gtattttcttatcgcacaaaacatctgagg--ctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||  |||| |||| ||| || |    | ||||| |||| || |||| | | ||||  ||||||||||||| ||||||||| |||||||||||||    
T  25579519 gaattttcccttcaacttgagcgtactttttttcgtatcacataaaatacccgaggctctcttctccattttaaccacccaacttgaatacgatg 25579613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 37617878 - 37617823
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaa 65  Q
    ||||| ||||||||||||||||| ||| | |||| ||||||||||||| |||||||    
T  37617878 acatcctcatctctgctacacttgcttgattctcatgttgactcttaaccgcccaa 37617823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 7189623 - 7189752
Alignment:
Q  52 tcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaa 151  Q
    |||||| | ||||||||| ||||||||||||||| | ||||||||||| ||| | ||| ||  |  ||||||  ||||||  || |||||||||  | ||    
T  7189623 tcttaaccacccaacactctgtaccatacaacatcgtcggtctgactactgt-ctataaaatttctctttcaatttaagtaatactttcttatcaaataa 7189721  T
Q  152 aacatctgaggctcttctccatttcaaccac 182  Q
    |||| ||||| || |||||||||||||||||    
T  7189722 aacacctgagacttttctccatttcaaccac 7189752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 418907 - 418940
Alignment:
Q  160 aggctcttctccatttcaaccacccagcttgaat 193  Q
    |||||||||||||||||| |||||||||||||||    
T  418907 aggctcttctccatttcacccacccagcttgaat 418940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 33139090 - 33139014
Alignment:
Q  125 cttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||| |||||  |||||| ||||||| |||  | | ||||||||||||||||| |||||| | |||||||||||||    
T  33139090 cttaaatggtacattcttagcgcacaatacacattaagctcttctccatttcaatcacccaacatgaatacgatgat 33139014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 11992454 - 11992645
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||| ||||  |||||||||    
T  11992454 acatcctcatctccgctacacttactttactctcgtgttgactcttaaccgcccatcactccgtaccatacaacattgccggtcagactgctgtccgata 11992553  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11992554 gaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgat 11992645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 41197576 - 41197768
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  41197576 acatcctcatctccgctacacttactttactctcgtgttggctcttaaccgcccaacactttgtaccatacaacattgctggtctgactgttgttcgata 41197675  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgatg 202  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  41197676 gaactttcctttcagcttaagtggtacttttttatcgcacaaaacacctgagactcttctccatttcaaccacccaacttgaatacgatgatg 41197768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 3866006 - 3865818
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||||| || ||||||||  |||||||||||||  | |||||||||| ||||||||||    
T  3866006 acatcatcatctctgctacacttacttgattctcatgttgactcttaaccgtccaacactccgtaccatacaacaacgtcggtctgactgttgtccgata 3865907  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgat 198  Q
    |||| ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3865906 gaactttcctttcaacttaagtagtactttcttatcacacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgat 3865818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 45367972 - 45368160
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||| |||||| ||||  ||||| |||||||||| |||||||||| ||||||||||    
T  45367972 acatcatcatctccgttatacttactttactctcgtgttggctcttaatcgcccagcactccgtaccttacaacattgtcggtctgactgttgtccgata 45368071  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgat 198  Q
     ||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  45368072 aaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgat 45368160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 2610461 - 2610273
Alignment:
Q  11 catcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatag 110  Q
    |||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||| |||||||| |||||||||||    
T  2610461 catcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccagtctgactgttgtccgatag 2610362  T
Q  111 aaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    ||| ||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  2610361 aactttcctttcaacttaagtggtactttcttatcgcataaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatg 2610273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 451976 - 452159
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  | ||||| ||||  ||||||||||||| |    
T  451976 tcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgtcggtcggactgctgtccgatagaactt 452075  T
Q  116 tcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  452076 tcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 452159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 41763389 - 41763588
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||||||||| | || | |||||    
T  41763389 acatcctcatctccgctacacttactttactctcgtgttggttcttaaccgcccaacactctgtaccatacaacattgccggtctgattgttcttcgata 41763488  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctcca--------tttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||    
T  41763489 gaactttccttttagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaagttttcaaccacccagcttgaatacgatgat 41763588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 8180714 - 8180525
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| || ||||||||  |||||||||||||  || |||||||||  |||||||||    
T  8180714 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgtccaacactccgtaccatacaacaacgctggtctgactgatgtccgata 8180615  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  8180614 gaactttcctttcaacttaagtggtactttcttatcgcacaaaactcttgaggctcttctccatttcaaccacccagcttgaatacgatg 8180525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 4807526 - 4807337
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| ||| ||||||| |||  |||||||||  | ||||| ||||  |||||||||    
T  4807526 acatcctcatctctgctacacttacttaattctcatgttgactcttaaccgctcaacactctgtgtcatacaacaacgtcggtcggactgctgtccgata 4807427  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  4807426 gaactttcctttcaacttaaatggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccatcttgaatacgatg 4807337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 3244007 - 3244188
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttc 117  Q
    ||||||||||||||||||| | |||| |||||||||||||  | ||||||||  ||||||| |||||  ||||||| ||||  ||||||||||||| |||    
T  3244007 atctctgctacacttacttgattctcatgttgactcttaactgtccaacactccgtaccattcaacaacgccggtcggactgctgtccgatagaactttc 3244106  T
Q  118 ctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  3244107 ctttcaacataagtggtactttcttatcgcacaaaacacctgaggctcatctccatttctaccacccagcttgaatacgatg 3244188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 23997551 - 23997394
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| | |||||||||||  |||||||||||||||||||  ||||||||||| |||||||||||||||| |||||| ||| ||||||||||    
T  23997551 acatcttcatctccgttacacttacttggctctcgtgttgactcttaactgcccaacacttcgtaccatacaacattgtcggtcttactgttgtccgata 23997452  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctctt 167  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  23997451 gaactttcctttcagcttaagtggtattttctcatcgcacaaaacacctggggctctt 23997394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 24583954 - 24584143
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||  || | ||  | |    
T  24583954 acatcttcatctctgctacacttacttgattctcgtgttgactcttaaccgcccaacattttgtaccatacaacatcgtcggtctggatactatctaaca 24584053  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| || |||||| |||||||||||||||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||| ||||    
T  24584054 gaacttttctttcaacttaagtggtattttcttttcgcacaaaacacacgaggctattctccatttccaccacccagcttgaatatgatg 24584143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 6238132 - 6238292
Alignment:
Q  40 tctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtatttt 139  Q
    |||||||||||||||||| | |||||||||  |||||||||||||| | | |||| ||| |||||||||||||  ||| ||||| |||||||||||||||    
T  6238132 tctcgtgttgactcttaaccacccaacactccgtaccatacaacatcgtcagtctaactgttgtccgatagaattttcttttcaacttaagtggtatttt 6238231  T
Q  140 cttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
     ||||| |||||||||  |||||||||||||||||||||||| ||| |||||||||||||||    
T  6238232 -ttatcacacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatgat 6238292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 38453059 - 38453157
Alignment:
Q  101 tgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  38453059 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatatgatg 38453157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 30743557 - 30743366
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||  | |||||||||| | |||||||||| || |||| |||| ||| ||  |||||||||||||| | |||||||||   | |||| ||    
T  30743557 acatcctcatctccacaacacttacttgattctcgtgttggcttttaatcgcctaactctccgtaccatacaacatcgtcggtctgaccgctatccggta 30743458  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
     ||| ||||||||| ||||||||||| ||||||||| |||||||||  ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  30743457 aaactttcctttcaacttaagtggtactttcttatcacacaaaacacatgaggctcttctcaatttcaatcactcagcttgaatacgatgat 30743366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 36183385 - 36183264
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| |||| ||||||||||    
T  36183385 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgttgtccgata 36183286  T
Q  110 gaaccttcctttcagcttaagt 131  Q
    |||| ||||||||| |||||||    
T  36183285 gaactttcctttcaacttaagt 36183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 38429818 - 38429700
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||| |||||||||||||  |||||| |||||||||||  ||||||||||||||||||||| |||||  |||| ||||    
T  38429818 acatcctcatctccgctacacttactctactctcgtgttggttcttaaccgcccaacactccgtaccatacaacattgccggtttgactgctgtctgata 38429719  T
Q  110 gaaccttcctttcagctta 128  Q
    |||| ||||||| ||||||    
T  38429718 gaactttccttttagctta 38429700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 12734609 - 12734502
Alignment:
Q  40 tctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtatttt 139  Q
    |||| ||||| |||| || ||||||||||| ||||||||||||||| |  ||| ||||| ||||| |||||||| ||||||||| ||||||||||| |||    
T  12734609 tctcatgttggctctaaaccgcccaacactctgtaccatacaacatcgatggtttgactgttgtc-gatagaactttcctttcaacttaagtggtacttt 12734511  T
Q  140 cttatcgca 148  Q
    ||| |||||    
T  12734510 cttgtcgca 12734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 13149142 - 13149056
Alignment:
Q  115 ttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||||| | ||| ||||||| |||||||||  |  ||||| |||| |||||||| ||||||||||| ||| |||||||||||||||    
T  13149142 ttccttttaacttgagtggtactttcttatcatatgaaacacctgaagctcttcttcatttcaaccatccaacttgaatacgatgat 13149056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 16097338 - 16097480
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgccc----aacactttgtaccatacaacattgccggtctgactattgtcc 105  Q
    ||||| ||||||| ||||||||||||| | |||| ||||| ||||||| || ||    || | || |||||||||||||   | |||||||||  |||      
T  16097338 acatcctcatctccgctacacttacttgattctcatgttggctcttaaccgtccgtccaagatttcgtaccatacaacaacactggtctgactgctgttt 16097437  T
Q  106 gatagaaccttcctttcagcttaagtggtattttcttatcgca 148  Q
    |||||||| ||||||||| |||||||||||  |||||||||||    
T  16097438 gatagaactttcctttcaacttaagtggtaccttcttatcgca 16097480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 32443527 - 32443471
Alignment:
Q  31 ttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattg 87  Q
    |||||| | ||||||||||| |||||| | ||||||||| |||||||||||||||||    
T  32443527 ttacttgattctcgtgttgattcttaaccacccaacactctgtaccatacaacattg 32443471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 36039157 - 36039088
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccata 79  Q
    ||||| |||||||||||||  |||||||| |||||| | |  |||||| | |||||||||||||||||||    
T  36039157 acatcttcatctctgctacgattactttattctcgtttagtttcttaaccacccaacactttgtaccata 36039088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 9706710 - 9706519
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||  ||| |||||    
T  9706710 acatcctcatctccgctacacttactttactctcgtgttgactcttaaccacctaacacttcgtaccatacaacattgccggtctgactgctgttcgata 9706611  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  9706610 gaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgatgctcttctccatttcaaccacccagcttgaatacgatgat 9706519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 608093 - 607900
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||  |||| ||||||||||||||||||||||  |||||||||    
T  608093 acatcctcatctccgctacacttactttattctcgtgttggctcttaaccgcccaacactccgtacaatacaacattgccggtctgactgctgtccgata 607994  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgatgt 203  Q
    |||| || ||||||| |||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  607993 gaacttttctttcagtttaagtggtcatgtcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgatgt 607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 5258512 - 5258696
Alignment:
Q  24 gctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttca 123  Q
    |||||||||||||| ||||||||||| |||||   |||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  5258512 gctacacttactttgctctcgtgttggctcttcgccgcccaacactccgtaccatacaacattgccggtctgactgttgtccgatagaactttcctttca 5258611  T
Q  124 gcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgatgtccatc 208  Q
    |||||||||||| ||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5258612 gcttaagtggtactttctcatcgcaaaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatgatgtacatc 5258696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 5631752 - 5631561
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||  ||||||||||||||||||||| |||| ||||||| |||||||||||   ||||||||||||||| |||||||||| ||||||||||    
T  5631752 acatcctcatcttcgctacacttactttactctcgcgttggctcttaaccgcccaacactccataccatacaacattgtcggtctgactgttgtccgata 5631653  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  ||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||    
T  5631652 gaattttcctttcagcttaagtggtactttcttatcgcacaaaacacccgagactcttctccatttcaaccacccagcttgaatacgatgat 5631561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 14030740 - 14030558
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||  || ||||| ||||||||||    
T  14030740 acatcctcatctctgctacacttactttactctcgtgttgacttttaaccgcccaacactccgtaccatacaacattgctagtttgactgttgtccgata 14030641  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaa 192  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||    
T  14030640 gaactttcatttcagcttaagtggtactttcttatcgcacaaaacacctgagactattctccatttcaaccacccagtttgaa 14030558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 10100205 - 10100396
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||||||||| |||||||| ||| ||||||| | |||||||||  |||||||||||||| | ||||||||||| |||||||||    
T  10100205 acatcctcatctccgctacacttacttgactctcgtcttggctcttaacctcccaacactccgtaccatacaacatcgtcggtctgactactgtccgata 10100304  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||| ||||||||||| ||||||||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  10100305 gaactttcctttcaacttaagtggtactttcttatctcacaaaacacatgaggctcttctccattccaaccacccagcttgaatacgatgat 10100396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 20427984 - 20428175
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||| || |||||||||||| ||||||| | ||||||||| ||||| ||||||||||    || |||||  ||||| |||    
T  20427984 acatcctcatctccgctacacttatttgactctcgtgttggctcttaaccacccaacactctgtactatacaacatttttagtttgactgctgtccaata 20428083  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  20428084 gaactttcctttcagcttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttggatacgatgat 20428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 30679396 - 30679220
Alignment:
Q  22 ctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttccttt 121  Q
    ||||||||||||||| | ||||||||||| ||||||  | |||||| | || |||||||||||| | |||||||||| ||||| |||||||| |||||||    
T  30679396 ctgctacacttacttgattctcgtgttgattcttaactgtccaacattatgcaccatacaacatcgtcggtctgactgttgtctgatagaactttccttt 30679297  T
Q  122 cagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgat 198  Q
    || |||| |||||| ||||||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||    
T  30679296 caacttatgtggtactttcttatcgctcaaaacacctgagcctcttctctatttcaaccacccaacttgaatacgat 30679220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 2689590 - 2689399
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||  ||||| |||||| | ||||| |||| || |||| |||||||||||  |||||||||||||| | ||||||||||  ||||||||     
T  2689590 acatcctcatctccactacatttacttaattctcgcgttggctgttaaccgcccaacactccgtaccatacaacatcgacggtctgactgctgtccgatt 2689491  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||| ||||||| ||  ||||||||| ||||||| |  |||||| |||||||||||||| || ||||||||| |||||||||    
T  2689490 gaactttcctttcaacttaagtagtgctttcttatcacacaaaatacatgaggcacttctccatttcaatcatccagcttgactacgatgat 2689399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 33496118 - 33495941
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||||||||||| | ||||||||||| | |||| |||||  | |||| || |||||||| |||||||||||||||||| ||||||||| ||||||        
T  33496118 acatcatcatctccgttacacttacttgattctcatgttggtttttaaccgtccaacactctgtaccatacaacattgcaggtctgactgttgtcc---- 33496023  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
             ||| | ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  33496022 ---------tttaaacttaagtggtactttcttatcacacaaaacatctgagactcttctccatttcaaccatccagcttgaatatgatga 33495941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 6056133 - 6056298
Alignment:
Q  25 ctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcag 124  Q
    |||| ||||||| | | ||||||||  |||||| | |||||||||  ||| |||| ||||||| |||||||||  |||||||||||||   ||||||||     
T  6056133 ctacgcttacttgattttcgtgttggttcttaaccacccaacactccgtatcatataacattgtcggtctgaccgttgtccgatagaattatcctttcaa 6056232  T
Q  125 cttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttg 190  Q
    ||||| || ||||||||||||||| ||||||  ||| |||||||| ||||||||||||||| ||||    
T  6056233 cttaaatgatattttcttatcgcataaaacacttgaagctcttctacatttcaaccacccaacttg 6056298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 28085310 - 28085197
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||  |||||||||||  |||||||||| ||   |||||||||||  |||||||||    
T  28085310 acatcctcatctctgctacacttacttgattctcatgttgactcttagccgcccaacactccgtaccatacagcaacaccggtctgactgctgtccgata 28085211  T
Q  110 gaaccttcctttca 123  Q
    |||| |||||||||    
T  28085210 gaactttcctttca 28085197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 2065105 - 2065296
Alignment:
Q  11 catcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatag 110  Q
    |||| ||||||| ||||||| ||||| | |||||||||| ||||||| || |||||| |  |||||||||||||| ||| || | ||  |||||||||||    
T  2065105 catcctcatctccgctacacgtacttgattctcgtgttggctcttaaccgtccaacattccgtaccatacaacatcgccagttttacggttgtccgatag 2065204  T
Q  111 aaccttcctttcagcttaagtggtattttcttatcgcacaaaaca-tctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||  ||||||||| ||||||  ||| |||||||||  | ||||||  |  || ||||| ||||||||||| || || |||||||||||||||    
T  2065205 aagtttcctttcaacttaagatgtactttcttatcaaataaaacacccaaagtctcttttccatttcaacaacacatcttgaatacgatgat 2065296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 30031184 - 30031081
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||| |||||||| |||| | |||| ||||| ||||||| |||||||||||  ||||||||||||||    |||||||||  ||||||||||||| |    
T  30031184 tcatctccgctacactaacttgattctcatgttggctcttaaccgcccaacactccgtaccatacaacatcattggtctgactgctgtccgatagaactt 30031085  T
Q  116 tcct 119  Q
    ||||    
T  30031084 tcct 30031081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 35043789 - 35043857
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccat 78  Q
    ||||| ||||||| ||||||||||||| |||||| ||||| ||||||| || ||||||||  |||||||    
T  35043789 acatcttcatctccgctacacttacttgactctcatgttggctcttaaccgtccaacactccgtaccat 35043857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 24631132 - 24631227
Alignment:
Q  40 tctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggta 135  Q
    |||||| ||| ||||||| | |||||| || |||| |||||||||||||  || ||| | |||||||||| ||| ||| ||||| |||||||||||    
T  24631132 tctcgttttggctcttaatcacccaaccctctgtagcatacaacattgcaagtttgattgttgtccgatataactttcatttcaacttaagtggta 24631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 21870488 - 21870564
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggt 92  Q
    |||||||  |||| |||| ||||||||||||||   |||| | || |||||||||||| |||||||||||| |||||    
T  21870488 tcatctcgtctacgcttattttactctcgtgtttgttctttaccgaccaacactttgtcccatacaacattaccggt 21870564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 32083093 - 32083284
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||| ||||    
T  32083093 acatcctcatctccgctacacatactttactctcgtgttgactcttaaccgcccaacactctgtaccatacaacattgtcggtctgactgttgtctgata 32083192  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||||||||||||||| |||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32083193 gaactttcctttcagcttaagtggtactttcttatcgcatagaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgat 32083284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 30202478 - 30202667
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| ||||||||||| ||||||| ||||||  ||||||| |||| ||||||||||    
T  30202478 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctgtaccacacaacaacgccggtcggactgttgtccgata 30202577  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  30202578 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccggcttgaatacgatg 30202667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 8391706 - 8391525
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccataca--acattgccggtctgactattgtccga 107  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |  |||||||||||||||||  |||||||    
T  8391706 acatcttcatctccgctacacttactttactctcgtgttgactcttaaccgcccaacactctgtaccatatacgacattgccggtctgactgctgtccga 8391607  T
Q  108 tagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagctt 189  Q
    || ||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8391606 taaaacattcctttaagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagctt 8391525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 22090027 - 22089838
Alignment:
Q  11 catcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatag 110  Q
    |||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||| ||||||  ||||||| ||||  ||||||||||    
T  22090027 catcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccacacaacaacgccggtcggactgctgtccgatag 22089928  T
Q  111 aaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    ||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22089927 aactttcctttcaacttaagtggtattttcttattgcacaaaacatctgagactcttctccatttcaaccacccagcttgaatacgatga 22089838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 8671846 - 8671664
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttc 117  Q
    ||||||||||||||||||| | |||| ||||||||||||| || |||||| || |||||||||||||  |||||||||||| ||||| |||||||| |||    
T  8671846 atctctgctacacttacttgattctcatgttgactcttaaccgtccaacatttcgtaccatacaacaacgccggtctgactgttgtctgatagaactttc 8671747  T
Q  118 ctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  8671746 ctttcaacttaagtggtactttcttatcgcacaaaacacctgagtctcttctccattttaaccacccagcttgaatacgatga 8671664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 1210679 - 1210490
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  |||||||  |||  |||||||||    
T  1210679 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcgaactgctgtccgata 1210580  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  1210579 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctcaggctcttcttcatttcaaccacccagcttgaatacgatg 1210490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 9592668 - 9592479
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| |||||| |||||| |||||||||||  |||||||||||||  | | |||||||||||||||||||    
T  9592668 acatcctcatctctgctacacttacttgattctcatgttgattcttaaccgcccaacactccgtaccatacaacaacgtcagtctgactattgtccgata 9592569  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||    
T  9592568 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgagactcttctccatttcaaccacccaacttgaatacgatg 9592479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 43240729 - 43240918
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| | |||||||||  ||| |||||||||  ||||||| ||||  |||||||||    
T  43240729 acatcctcatctctgctacacttacttgattctcatgttgactcttaacctcccaacactccgtatcatacaacaacgccggtcggactgctgtccgata 43240828  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  43240829 gaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatg 43240918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 49347741 - 49347930
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||| |||||||||||||| | |||| ||||||||||||| |||||||||||| |||||||||||||  |  |||| ||||  |||||||||    
T  49347741 acatcctcatctttgctacacttacttgattctcatgttgactcttaaccgcccaacacttcgtaccatacaacaaggttggtcggactgctgtccgata 49347840  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    ||   ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49347841 gatttttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 49347930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 51441113 - 51441301
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||||||||||| |||| | |||| ||||||||||||| |||||||||||  |||||||||||||  | ||||| ||||  |||||||||    
T  51441113 acatcctcatctctgctacactcacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgtcggtcggactgctgtccgata 51441212  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  51441213 gaactttcctttcaacttaagtggtactttcttatcgca-aaaacacttgaggctcttctccatttcaaccacccagcttgaatatgatg 51441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 51601992 - 51601803
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| ||| |||||||||||| | |||| ||||||||||||| | |||||||||  |||||||||||||  ||||||| ||||| |||||||||    
T  51601992 acatcctcatatctactacacttacttgattctcatgttgactcttaaccacccaacactccgtaccatacaacaacgccggtcggactactgtccgata 51601893  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||| ||||| |||||| |||| |||||||||| |||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  51601892 gaactttcatttcaacttaaggggtactttcttatcgaacaaaacacctgagactcttctctatttccaccacccagcttgaatacgatg 51601803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 696203 - 696069
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||| | |||||||||  |||||||||||||||||||||||||||  |||||||||    
T  696203 acatcctcatctccgctacacttactttactctcgtgttggctcttaaccacccaacactccgtaccatacaacattgccggtctgactgctgtccgata 696104  T
Q  110 gaaccttcctttcagcttaagtggtattttcttat 144  Q
    |||| ||||||||||||||||||||| ||||||||    
T  696103 gaactttcctttcagcttaagtggtactttcttat 696069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 15085868 - 15085728
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||| |||||  |||| ||||    
T  15085868 acatcctcatctccgctacacttactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattgccggtttgactgctgtctgata 15085769  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcaca 150  Q
    |||| ||||||||||||||||||||  ||||||||||||||    
T  15085768 gaactttcctttcagcttaagtggtgctttcttatcgcaca 15085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 201
Target Start/End: Complemental strand, 19936414 - 19936265
Alignment:
Q  52 tcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaa 151  Q
    |||||| ||||||||||| | |||| || |||||||| ||||| |||  ||||||||| ||  |||||||||  ||||| |||| ||||||||| || ||    
T  19936414 tcttaaccgcccaacactctataccctataacattgctggtctaactgctgtccgatataattttcctttcattttaagcggtactttcttatcacataa 19936315  T
Q  152 aacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  19936314 aacacttgaggttcttatccatttcaaccacccagcttgaatacgatgat 19936265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 9599742 - 9599917
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||| ||||||| | | | ||||||  ||| || ||| |||||||||||| ||||| |||| || |||||||||   ||| ||||    
T  9599742 acatcctcatctctgctacgcttacttgattattgtgttggttctcaaccgcacaacactttgtatcataccacatcgctggtctgactgcggtctgata 9599841  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccaccca 185  Q
    |||  ||| ||||| || ||| |||| ||||||||| || ||||||  |||||||||| ||||||| |||||||||    
T  9599842 gaattttcatttcaactgaagcggtactttcttatcacataaaacacttgaggctcttatccatttaaaccaccca 9599917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 34827482 - 34827641
Alignment:
Q  42 tcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttct 141  Q
    ||||||||  |||||| ||  ||||||| ||||||||||||||| |  | ||||||| |||||| ||| ||  |||||||||  |||||  ||| |||||    
T  34827482 tcgtgttggttcttaaccgaacaacactctgtaccatacaacatcgttgatctgactgttgtccaatataattttcctttcaatttaagcagtactttct 34827581  T
Q  142 tatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| || ||||||  ||||||||||||||||||||||||  || ||||||||| |||||    
T  34827582 tatcacataaaacacatgaggctcttctccatttcaaccattcaacttgaatacaatgat 34827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 201
Target Start/End: Original strand, 37463257 - 37463404
Alignment:
Q  52 tcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaa 151  Q
    |||||| | ||||||||| ||||||||||||||||||  |||||||| ||||| |||||||  ||||||||| |||||   ||  ||||||||  |||      
T  37463257 tcttaaccacccaacactctgtaccatacaacattgctagtctgactgttgtctgatagaattttcctttcaacttaatcagtgctttcttat--cacct 37463354  T
Q  152 aacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| || |||||||||||||| ||||||||| ||||| ||||| |||||    
T  37463355 aacacctaaggctcttctccatatcaaccacctagcttaaatacaatgat 37463404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 3192133 - 3192071
Alignment:
Q  17 catctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccata 79  Q
    |||||||||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||||    
T  3192133 catctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctgtaccata 3192071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 3200951 - 3200889
Alignment:
Q  17 catctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccata 79  Q
    |||||||||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||||    
T  3200951 catctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctgtaccata 3200889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 3209788 - 3209726
Alignment:
Q  17 catctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccata 79  Q
    |||||||||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||||    
T  3209788 catctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctgtaccata 3209726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 27445738 - 27445641
Alignment:
Q  104 ccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaaca-tctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||| |||||||||  |||||||||| ||||||||| || |||||| || ||  ||||||||||||||||||| ||| |||||||||||||||    
T  27445738 ccgatagaactttcctttcaatttaagtggtactttcttatcacataaaacactcggaa-ctcttctccatttcaaccaaccaacttgaatacgatgat 27445641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 46226630 - 46226815
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||||||||||| |||| |||||||| | ||||||||||  | ||||  || ||||| || |||||||||||||| | |  | ||||  ||||| ||||    
T  46226630 acatcatcatctccgctaaacttacttgattctcgtgttggttgttaattgctcaacatttcgtaccatacaacatcgtcactatgacagttgtctgata 46226729  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatac 195  Q
    |||  || |||||| ||||||   || ||||||| | || ||||||  ||| |||||||||||||||||||| ||| |||||||||    
T  46226730 gaatttttctttcaacttaagcactactttcttagcacataaaacacttgatgctcttctccatttcaaccatccaacttgaatac 46226815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 34792697 - 34792768
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaa 82  Q
    ||||| ||||||||||||||||| ||| | |||||||||||||||||| |||||||||||  |||||||||||    
T  34792697 acatcctcatctctgctacactt-cttgattctcgtgttgactcttaaccgcccaacactccgtaccatacaa 34792768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 52831942 - 52831830
Alignment:
Q  60 gcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctg 159  Q
    ||||||||||| ||| |||||||||||| |||||| ||| | |||||||| ||  || ||||||  |||| ||  | |||||||||||| ||||||  ||    
T  52831942 gcccaacacttcgtatcatacaacattgtcggtctaactgtcgtccgatacaatttttctttcaatttaaatgacactttcttatcgcataaaacacatg 52831843  T
Q  160 aggctcttctcca 172  Q
    |||||||||||||    
T  52831842 aggctcttctcca 52831830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 32404941 - 32405068
Alignment:
Q  75 ccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaa-catctgaggctcttctccat 173  Q
    ||||||||||  || | |||||| ||||||||||||||  |||| |||| ||| ||||||  |||| ||||||| |||| || | ||||||| | |||||    
T  32404941 ccatacaacaacgctgatctgacaattgtccgatagaattttcccttcaacttgagtggtcctttcgtatcgcataaaaacacccgaggctcgtatccat 32405040  T
Q  174 ttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||| || ||||||| ||||||    
T  32405041 ttcaaccacctagattgaatatgatgat 32405068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 39140447 - 39140310
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||| |||| ||||||| | | || || ||  ||||||  ||||||||||  ||||||||||||||  |||||||||||  |||||||||    
T  39140447 acatcctcatctctactacgcttacttgattttcatgatggttcttaactgcccaacactc-gtaccatacaacatcaccggtctgactgctgtccgata 39140349  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgca 148  Q
    |||  | |||||||  ||||| |||| ||||||||||||    
T  39140348 gaatttgcctttcaatttaagcggtactttcttatcgca 39140310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 32066761 - 32066810
Alignment:
Q  152 aacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  32066761 aacacctgaggctcttctccattttaaccatccaacttgaatacgatgat 32066810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 32231302 - 32231359
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaaca 67  Q
    ||||| |||||||| |||||||||||| | |||||||||||| ||||| |||||||||    
T  32231302 acatcctcatctctactacacttacttgattctcgtgttgacccttaaccgcccaaca 32231359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 7921810 - 7921777
Alignment:
Q  61 cccaacactttgtaccatacaacattgccggtct 94  Q
    ||||||||||||||||||||||||||| ||||||    
T  7921810 cccaacactttgtaccatacaacattgtcggtct 7921777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 4001820 - 4001848
Alignment:
Q  29 acttactttactctcgtgttgactcttaa 57  Q
    |||||||||||||||||||||||||||||    
T  4001820 acttactttactctcgtgttgactcttaa 4001848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 26016371 - 26016295
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacatt 86  Q
    ||||| ||||||||||||| |||||||||   || |||||  |||| | ||||||||||||||| ||||| ||||||    
T  26016371 acatcctcatctctgctacgcttactttatgttcttgttggttctttaccgcccaacactttgtcccataaaacatt 26016295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 51234401 - 51234365
Alignment:
Q  157 ctgaggctcttctccatttcaaccacccagcttgaat 193  Q
    |||||||| |||||||||||||||||||| |||||||    
T  51234401 ctgaggctattctccatttcaaccacccaacttgaat 51234365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 42854352 - 42854543
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||  |||||||||||||||| ||||||||||  |||||||||    
T  42854352 acatcgtcatctccgctacactaactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattgtcggtctgactgctgtccgata 42854451  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42854452 gaattttcctttcagcttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatgat 42854543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 36565590 - 36565778
Alignment:
Q  11 catcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatag 110  Q
    |||| ||||||||||||||||||||| | |||| | ||||||||||| |||||||||||  |||||||||||||  ||||||||||||  ||||||||||    
T  36565590 catcctcatctctgctacacttacttgattctcatattgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgactgctgtccgatag 36565689  T
Q  111 aaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    ||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36565690 aactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 36565778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 39946791 - 39946602
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |  |||||||||||||| ||||| ||||||  |||||||||    
T  39946791 acatcctcatctctgctacacttacttgattctcgtgttgactcttaaccgcccaacattccgtaccatacaacatcgccggcctgactgctgtccgata 39946692  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| |||||||||  |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  39946691 gaactttcctttcaatttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccatccagcttgaatacgatg 39946602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 15215619 - 15215810
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||| |||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||  ||||||||||| ||| |||||    
T  15215619 acatcctcatctccgcttcacttactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattttcggtctgactactgttcgata 15215718  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| |||||||||||||||||| || ||||||| ||||||| |||   ||||||||||||||||||||||||| |||||||||||||||||    
T  15215719 gaactttcctttcagcttaagtgatactttcttaccgcacaagacactggaggctcttctccatttcaaccacctagcttgaatacgatgat 15215810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 12492190 - 12492378
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| |||||||||||||| | | |||| ||||||||||||| |||||||||||  ||||||| |||||  ||||||| |||   |||||||||    
T  12492190 acatcctcatatctgctacacttacatgattctcatgttgactcttaaccgcccaacactccgtaccatgcaacaacgccggtcggacggctgtccgata 12492289  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgat 198  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||||||    
T  12492290 gaactttcctttcatcttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccaacctgaatacgat 12492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 25300171 - 25299980
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| ||||||||||||| || | |||||||||| ||||||| |||||||||||  ||| |||||||||| |||||||  ||| ||||  ||||    
T  25300171 acatcctcatatctgctacacttatttgattctcgtgttggctcttaaccgcccaacactccgtagcatacaacatcgccggtcgaactgttgtgtgata 25300072  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| | ||| ||||| ||||||||||    
T  25300071 gaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaaccccctgcttgcatacgatgat 25299980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 18125103 - 18124920
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||| ||||||||||||| | |||| ||||| ||||||| |||||||||||  ||||||||||||||||  ||||||||| |||||||||||||| |    
T  18125103 tcatctccgctacacttacttgattctcatgttggctcttaaccgcccaacactccgtaccatacaacattgttggtctgactgttgtccgatagaactt 18125004  T
Q  116 tcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    |||||||| | ||||||||| ||||||||| || |||||| |||||| | ||||||||||||||||  |||||||||| ||||||    
T  18125003 tcctttcaac-taagtggtactttcttatcacataaaacacctgaggtttttctccatttcaaccattcagcttgaattcgatga 18124920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 36545081 - 36544896
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| | |||||||||  |||||||||||||  || ||| || ||||   ||||||    
T  36545081 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccacccaacactcggtaccatacaacaacgctggt-tg-ctat---ccgata 36544987  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    |||| ||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  36544986 gaactttcttttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttatccatttcaaccacccaacttgaatacgatga 36544896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 25288836 - 25288662
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| ||||||||||||| || | |||||||||| ||||||| |||||||||||  ||| |||||||||| |||||||  ||| ||||  ||||    
T  25288836 acatcctcatatctgctacacttatttgattctcgtgttggctcttaaccgcccaacactccgtagcatacaacatcgccggtcgaactgttgtgtgata 25288737  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccaccc 184  Q
    |||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  25288736 gaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccc 25288662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 4032907 - 4033033
Alignment:
Q  74 accatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccat 173  Q
    |||||||||| ||| |||||||||| |||||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  4032907 accatacaac-ttgtcggtctgactgttgtccgataaaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccat 4033005  T
Q  174 ttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||||| |||||||| ||||||    
T  4033006 ttcaaccacccaacttgaatatgatgat 4033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 37077699 - 37077508
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| || |||||||||| | |||||||||| |||||||  ||||||||||  |||||||||| ||| | |||||||||| ||||| || |    
T  37077699 acatcctcatctccgccacacttacttgattctcgtgttggctcttaactgcccaacactccgtaccatacagcatcgacggtctgactgttgtctgaca 37077600  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
     ||| | ||||||| ||||||||||| || |||||| ||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||    
T  37077599 taacttccctttcaacttaagtggtacttacttatcacacaaaacacctgagactcttctccatttcaaccacttagcttgaatacgatgat 37077508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 18752227 - 18752344
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||| |||||||||||||||||||||||||| ||||||| || ||| ||||  ||||||||||||||||||||||||||| |||||||||||||| |    
T  18752227 tcatctccgctacacttactttactctcgtgttggctcttaaccgtccagcactccgtaccatacaacattgccggtctgactgttgtccgatagaactt 18752326  T
Q  116 tcctttcagcttaagtgg 133  Q
    |||||| |||||||||||    
T  18752327 tcctttgagcttaagtgg 18752344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 36395298 - 36395443
Alignment:
Q  10 acatcatcatctctgctaca---cttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccg 106  Q
    ||||| ||||||||||||||   ||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||  ||||||    
T  36395298 acatcctcatctctgctacaacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgctgtccg 36395397  T
Q  107 atagaaccttcctttcagcttaagtggtattttcttatcgcacaaa 152  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  36395398 atagaactttcctttcaacttaagtggtactttcttatcgcacaaa 36395443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 2796489 - 2796326
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||| |||||||||||||| | |||||||||||||||||| | ||||| |||  |||||||| ||||  | |||||| ||| |||||| |||    
T  2796489 acatcctcatctttgctacacttacttgattctcgtgttgactcttaaccacccaagactcggtaccatataacaacgtcggtctaactgttgtccaata 2796390  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccat 173  Q
     ||| ||||||||| ||||||||||| |||||||||||||| |||| |  ||||||||||||||    
T  2796389 taactttcctttcaacttaagtggtactttcttatcgcacagaacaccgaaggctcttctccat 2796326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 25439393 - 25439279
Alignment:
Q  87 gccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccag 186  Q
    |||||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||||||| ||||||||| | ||| ||||||||||||||||||| || |    
T  25439393 gccggtctgactgttgtgtgatagaactttcctttcaacttaagtggtactttcttatcacacaaaacacccgagactcttctccatttcaaccatcctg 25439294  T
Q  187 cttgaatacgatgat 201  Q
    |||| ||||||||||    
T  25439293 cttgcatacgatgat 25439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 8879794 - 8879971
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||| ||||||||||||| | ||| ||| || ||||| | ||||||||||       |||||||||| |  |||||||||  ||||||||||||| |    
T  8879794 tcatctccgctacacttacttgattcttgtgctggctcttcaccgcccaacaca------catacaacatagtaggtctgactgctgtccgatagaactt 8879887  T
Q  116 tcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    | |||||| ||||||||||| ||||||||||||||||||| || ||| ||||||| |||||||||| ||| | |||||||||||    
T  8879888 ttctttcaacttaagtggtactttcttatcgcacaaaacacctaaggttcttctctatttcaaccatccaacatgaatacgatg 8879971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 13984906 - 13984777
Alignment:
Q  72 gtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctcc 171  Q
    ||||||||||||||||  ||||| ||  |||||| ||||||  ||||||| | |||||    |||||||||||| || ||||||  |||||||||||| |    
T  13984906 gtaccatacaacattgttggtcttacggttgtccaatagaattttccttttaacttaaacaatattttcttatcacataaaacacttgaggctcttcttc 13984807  T
Q  172 atttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||| ||| ||| |||||||||||    
T  13984806 atttcaaccatccaacttaaatacgatgat 13984777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 6510843 - 6510948
Alignment:
Q  89 cggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgca-caaaacatctgaggctcttctccatttcaaccacccagc 187  Q
    ||||||||||| |||| | |||||| ||||||||| ||||||  ||| ||||||||| || |||| ||  |||| |||||||||||||||||||| || |    
T  6510843 cggtctgactaatgtctgttagaactttcctttcaacttaagcagtactttcttatcacatcaaaccacatgagactcttctccatttcaaccactcaac 6510942  T
Q  188 ttgaat 193  Q
    ||||||    
T  6510943 ttgaat 6510948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 10824546 - 10824609
Alignment:
Q  120 ttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacc 183  Q
    |||| ||||| |||||||||| |||| || |||||| ||||| |||||||||||||||||||||    
T  10824546 ttcaacttaactggtattttcgtatcacataaaacacctgagactcttctccatttcaaccacc 10824609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 28300596 - 28300655
Alignment:
Q  150 aaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgatgtccatct 209  Q
    |||||||| ||| |||||||||| || ||||| ||| ||||||||||||||||| |||||    
T  28300596 aaaacatccgagtctcttctccaatttaaccatccaacttgaatacgatgatgtacatct 28300655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 13589247 - 13589190
Alignment:
Q  137 tttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaata 194  Q
    |||||||| ||| ||||||  | |||||||||||||||||||||| ||| ||||||||    
T  13589247 tttcttatagcataaaacacatcaggctcttctccatttcaaccatccaccttgaata 13589190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 30113671 - 30113735
Alignment:
Q  137 tttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||||||| || |||||| ||| | |||||||||||||||||||   ||||||||||| |||||    
T  30113671 tttcttatcacataaaacacctgcgactcttctccatttcaaccatttagcttgaatacaatgat 30113735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 44681543 - 44681615
Alignment:
Q  129 agtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||||| |||| || | ||||  ||| ||||||||||||||||| ||| || |||||||||| ||||    
T  44681543 agtggtattttcgtatcacatagaacacttgatgctcttctccatttcaaacactcaacttgaatacgctgat 44681615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 27450521 - 27450712
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||| |||||||||| ||||| ||||    
T  27450521 acatcctcatctccgctacacttactttactctcgtgttggctcttaactgcccaacactccgtaccatacaacattgtcggtctgactgttgtctgata 27450620  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  27450621 gaattttcctttcagcttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatgat 27450712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 23906649 - 23906838
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||| |||||||||||||  ||||||| ||||  |||||||||    
T  23906649 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacacttcgtaccatacaacaacgccggtcggactgctgtccgata 23906748  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23906749 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 23906838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 31960162 - 31960351
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||||||||  |||||||||    
T  31960162 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgactgctgtccgata 31960261  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31960262 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacatatgaggctcttctccatttcaaccacccagcttgaatatgatg 31960351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 436163 - 435973
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  436163 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgctgtccgata 436064  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  436063 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccactcagcttgaatacgatga 435973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 43433852 - 43433663
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  |||||||||| |  |||||||||    
T  43433852 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgattgctgtccgata 43433753  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||  | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  43433752 gaactttcctttcaacttaagtgacactttcttatcgcacaaaacacctgaggctcttctccatttcaatcacccagcttgaatacgatg 43433663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 53707728 - 53707539
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| ||||||||||| | ||||||||| ||  ||||||| || |  || ||||||    
T  53707728 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctctaccatacatcaacgccggtcggaatgctggccgata 53707629  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  53707628 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacatctgagtctcttctccatttcaaccacccagcttgaatacgatg 53707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 33227143 - 33226954
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||| | | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  33227143 acatcctcatctctgctacacttacatgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgctgtccgata 33227044  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  33227043 gaactttcctttcaacttaagtggtactttcttatcgtacaaaacacctgagactcttctccatttcaaccacccagcttgaatatgatg 33226954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 1211738 - 1211929
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| || ||||||||||||| | |||||||||| ||||||| || |||||||| ||||||| |||||||  ||||||||||| ||||||||||    
T  1211738 acatcctcatatccgctacacttacttgattctcgtgttggctcttaaccgtccaacactctgtaccacacaacatcaccggtctgactgttgtccgata 1211837  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  1211838 gaactttcctttcaacttaagtggtattttcttatcatacaaaacatttgaggctcttctccatttcaactacctaacttgaatacgatgat 1211929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 46583172 - 46583361
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  |||| |||||||  ||||| |||    
T  46583172 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacagcgccgatctgactgctgtccaata 46583271  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| |||||||||  ||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  46583272 gaactttcctttcaaattaagtgatactttcttatcgcacaaaatacctgaggctcttctccatttcaaccacccagcttgaatatgatg 46583361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 48174441 - 48174630
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||| ||||| |||||||| | | || ||||||||||||| || ||||||||  |||||||||||||  ||||||||||||  |||||||||    
T  48174441 acatcctcatctttgctatacttacttgattttcatgttgactcttaaccgtccaacactccgtaccatacaacaacgccggtctgactgctgtccgata 48174540  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  48174541 gaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacctagcttgaatacgatg 48174630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 56375224 - 56375035
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||||||||||||  || | |||| ||||||||||||| |||||||||||  ||||||||||| |  || |||||||||  |||||||||    
T  56375224 acatcctcatctctgctacacttgtttgattctcatgttgactcttaaccgcccaacactccgtaccatacaataacgctggtctgactgctgtccgata 56375125  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    || | |||||||||  |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  56375124 gatctttcctttcaaattaagtggtactttcttatcgcacaaaacacctgaggctcttctcaatttcaaccacccagcttgaatacgatg 56375035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 1777363 - 1777553
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||| ||||| |||||||| | | || ||||||||||||| |   |||||||  ||| |||||||||  | ||||||||||  |||||||||    
T  1777363 acatcctcatctttgctatacttacttgattttcatgttgactcttaacctttcaacactccgtatcatacaacaacgtcggtctgactgctgtccgata 1777462  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1777463 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatga 1777553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 50286899 - 50286716
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  ||| |||||||||  | || ||||||  |||||||||||||| |    
T  50286899 tcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtatcatacaacaacgtcgatctgacggttgtccgatagaactt 50286800  T
Q  116 tcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||||| ||||| ||||| |||||||||||||||||||  || | ||||||| |||||||||||||||||||||||||||||    
T  50286799 tcctttcaacttaaatggtactttcttatcgcacaaaacacatgtgactcttcttcatttcaaccacccagcttgaatacgatg 50286716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 47265550 - 47265735
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||| |||||||| ||||| | |||||||||||||||||| || |||| ||||||||||||||||||| || ||||||||| ||||| ||||    
T  47265550 acatcctcatctttgctacacctacttgattctcgtgttgactcttaaccgtccaatactttgtaccatacaacatcgctggtctgactgttgtcagata 47265649  T
Q  110 gaaccttcctttcagcttaagtgg---tattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaa 192  Q
    |||| ||| ||||| |||||||||   || ||||||||||||||||||| || |||||||||| |||||||| |||||||||||||    
T  47265650 gaactttcatttcaacttaagtggtactactttcttatcgcacaaaacacctaaggctcttcttcatttcaatcacccagcttgaa 47265735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 39708377 - 39708204
Alignment:
Q  25 ctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcag 124  Q
    |||||||||||| | |||||||||| ||||||| |||||||||||  |||||||||||||||| || || |||| ||| |||||||||| |||||||||     
T  39708377 ctacacttacttgattctcgtgttgcctcttaaccgcccaacactccgtaccatacaacattgtcgatcggactgttgcccgatagaactttcctttcaa 39708278  T
Q  125 cttaagtggtattttcttatcgcacaaaa-catctgaggctcttctccatttcaaccacccagcttgaatacga 197  Q
    ||||||||||| ||||||||| || |||| || || |||||||| ||||||||||||| |||||||||||||||    
T  39708277 cttaagtggtactttcttatcacaaaaaaccacctaaggctcttatccatttcaaccatccagcttgaatacga 39708204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 48622939 - 48623064
Alignment:
Q  74 accatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccat 173  Q
    ||||||||| |  ||||||||||||  ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  48622939 accatacaataacgccggtctgactgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggcttttctccat 48623038  T
Q  174 ttcaaccacccagcttgaatacgatg 199  Q
    ||||||||||||||||||||||||||    
T  48623039 ttcaaccacccagcttgaatacgatg 48623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 16002846 - 16002671
Alignment:
Q  25 ctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcag 124  Q
    |||||||||||| | |||||||||||||||||| | |||||||||| || | ||||||||| || ||||| |||  |||| |||| ||| || |||| |     
T  16002846 ctacacttacttgattctcgtgttgactcttaacctcccaacacttcgttc-atacaacatcgctggtctaactgatgtctgataaaacttttctttgaa 16002748  T
Q  125 cttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||    
T  16002747 cttaagtggtactttcttatcacacaaaacacctgaggctcttctcaatttcaaccactcagcttaaatacgatgat 16002671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 52569871 - 52569988
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttc 117  Q
    ||||||||||||||||||| | |||| ||||||||||||| ||  |||||||  |||||||||||||   ||||||||||| |||||| ||||||| |||    
T  52569871 atctctgctacacttacttgattctcatgttgactcttaaccgaacaacactccgtaccatacaacaacaccggtctgactgttgtccaatagaactttc 52569970  T
Q  118 ctttcagcttaagtggta 135  Q
    |||||| |||||||||||    
T  52569971 ctttcaacttaagtggta 52569988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 55578965 - 55578777
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| | ||||||||||| || | ||||||||||  |||||| ||||||||||||  |||||||||||||||  ||||||||| ||||||||||    
T  55578965 acatcctcatatatgctacacttaattgattctcgtgttggttcttaaccgcccaacacttcataccatacaacattgttggtctgactgttgtccgata 55578866  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  |||||| || |||||| |  |   | ||||| || ||||||||||| | |||||||||||| ||||||| | ||| |||||||||||    
T  55578865 gaattttccttccaacttaagcgaca---tgttatcacataaaacatctgaagatcttctccattttaaccacctaacttaaatacgatgat 55578777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 41009698 - 41009888
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||| || ||||||||||||| | |||| ||||| ||||||| |||||||||||  |||| ||||||||| || ||||||| | |||||| |||    
T  41009698 acatcctcatttccgctacacttacttgattctcatgttggctcttaatcgcccaacactccgtactatacaacatcgctggtctgattgttgtccaata 41009797  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgag---gctcttctccatttcaaccacccagcttgaatacga 197  Q
    |||| ||  |  || |||||||||||||||||||||  ||||| || || ||     |||||||||||||||||||| | |||||||||||    
T  41009798 gaacttttttcccaacttaagtggtattttcttatcatacaaatcacctcagattaatcttctccatttcaaccacctaacttgaatacga 41009888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 35690238 - 35690048
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||||||||| | |||| |||||  |||||| | | ||||| |   || |||||||||| | |||||| ||| ||||| ||||    
T  35690238 acatcctcatctcggctacacttacttgattctcatgttggttcttaaccacacaacattccatatcatacaacatcgtcggtctaactgttgtctgata 35690139  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  ||||| ||| |||||  || | ||||||||| || |||||| | |   ||||||||||||||||||||||| |||||||||||||||    
T  35690138 gaattttcctctcaacttaaacggcactttcttatcacataaaacacccgca-ctcttctccatttcaaccacccaacttgaatacgatgat 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 11389654 - 11389555
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||| ||||||||| ||||| ||||  |||||| |||||||||||   | ||||||||||||| |||||| || | |||||||||    
T  11389654 acatcctcatctctgctacgcttactttattctcgagttggttcttaaccgcccaacactactttccatacaacattgtcggtcttacaactgtccgata 11389555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 12494684 - 12494625
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacact 69  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  12494684 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacact 12494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 31458962 - 31458875
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgac 97  Q
    ||||| |||||| |||||||||||||||| | ||||||||  ||||||  ||||||||||  |||||||| ||||| |||||||||||    
T  31458962 acatcctcatctgtgctacacttactttattttcgtgttggttcttaactgcccaacactccgtaccataaaacatcgccggtctgac 31458875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 33191196 - 33191255
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacact 69  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  33191196 acatcctcatctctgctacacttacttgattctcatgttgactcttaatcgcccaacact 33191255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 54914591 - 54914708
Alignment:
Q  64 aacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggc 163  Q
    ||||||||||||| |||||  || |  ||||||||  || |||||||||  ||||||||| ||||||||||||||||||||| || |||||| |  | ||    
T  54914591 aacactttgtaccgtacaatgttactagtctgactcctgaccgatagaattttcctttcaacttaagtggtattttcttatcacataaaaca-ccaaagc 54914689  T
Q  164 tcttctccatttcaaccac 182  Q
    | |||||||||||||||||    
T  54914690 ttttctccatttcaaccac 54914708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 1793394 - 1793317
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattg 87  Q
    ||||| ||||||| ||||||||||||| | ||| |||||| ||||||| |||| |||||| |||| ||||||||||||    
T  1793394 acatcctcatctccgctacacttacttgattctagtgttggctcttaaccgccaaacactctgtatcatacaacattg 1793317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 45205196 - 45205280
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtct 94  Q
    ||||| ||||||| ||||| ||||||| | ||||||||||  ||||||  ||||||||||  |||||||||||||| ||||||||    
T  45205196 acatcctcatctccgctacgcttacttgattctcgtgttggttcttaactgcccaacactccgtaccatacaacatcgccggtct 45205280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 27983128 - 27983077
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaaca 67  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||| |||||    
T  27983128 tcatctccgctacacttactttactctcatgttgactcttaaccgctcaaca 27983077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 7092567 - 7092759
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| |||||||||||||||||||||   ||||||||||  ||||||  ||| || |||  |||||||||||||| |||| ||| |||  ||||  |||    
T  7092567 acatcctcatctctgctacacttacttgcttctcgtgttggttcttaactgcctaaaactccgtaccatacaacatcgccgatctaactgctgtctaata 7092666  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgatgtccatct 209  Q
    |||  |||||||||       ||||| |||||||| | | ||||| | ||||||  |  ||||||||||||||||| ||||||||  ||||||| |||||    
T  7092667 gaattttcctttca-------tggtactttcttattgtataaaacttatgaggcattcttccatttcaaccacccaacttgaataatatgatgtacatct 7092759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 26037836 - 26037904
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaaca 84  Q
    ||||||| ||| ||||||||| | |||||||||| ||||||| |||||||||||  ||| |||||||||    
T  26037836 tcatctccgctccacttacttgattctcgtgttggctcttaaccgcccaacactccgtatcatacaaca 26037904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 39100881 - 39100949
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccat 78  Q
    ||||| ||||||| ||||||||||| | |||||||||||| |||||||  | |||||||| ||||||||    
T  39100881 acatcctcatctccgctacacttacatgactctcgtgttggctcttaactgtccaacactctgtaccat 39100949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 4440781 - 4440687
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaac 113  Q
    ||||||||||||||||||| | |||| ||||||||||||| || |||||||   ||| |||||||||  |  |||||||||  |||||||||||||    
T  4440781 atctctgctacacttacttgattctcatgttgactcttaaccg-ccaacaccccgtatcatacaacaacgttggtctgactgctgtccgatagaac 4440687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 9e-63; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 12492735 - 12492924
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  12492735 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaaagccggtcggactgctgtccgata 12492834  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12492835 gaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatg 12492924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 2075822 - 2076011
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  2075822 acatcctcatctctgctacacttacttaattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgctgtccgata 2075921  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  2075922 gaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttcttcatttcaaccacccaacttgaatacgatg 2076011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 28977211 - 28977394
Alignment:
Q  16 tcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaacct 115  Q
    ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  | || || ||||  ||||||||||||| |    
T  28977211 tcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgtcgttcggactgatgtccgatagaactt 28977310  T
Q  116 tcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  28977311 tcctttcaacttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatg 28977394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 1275199 - 1275010
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||  ||||||| | |||| ||||||||| ||| |||||||||||  |||||||||||||  ||||||||||||  |||||||||    
T  1275199 acatcctcatctctgctatgcttacttgattctcatgttgactcgtaaccgcccaacactccgtaccatacaacaacgccggtctgactgctgtccgata 1275100  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  1275099 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacaccttaggctcttcttcatttcaaccacccagcttgaatacgatg 1275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 36 - 201
Target Start/End: Complemental strand, 3301757 - 3301592
Alignment:
Q  36 ttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggta 135  Q
    ||||| |||||||| ||||||| |||||||||||| |||||||||||||||| | ||||||||| ||||||||||||| |||||||||  ||||||||||    
T  3301757 ttactttcgtgttggctcttaaccgcccaacacttcgtaccatacaacattgtcagtctgactactgtccgatagaactttcctttcaatttaagtggta 3301658  T
Q  136 ttttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
     ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  3301657 ctttcttatcgcacaaaacacctgaggctcatctctatttcaaccacccagcttgaatacgatgat 3301592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 10639231 - 10639042
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||| | |||||||||||  |||||||||||||  | ||||| ||||  ||| |||||    
T  10639231 acatcctcatctctgctacacttacttgattctcatgttgactcttcaccgcccaacactccgtaccatacaacaacgtcggtcggactgctgttcgata 10639132  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  10639131 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatg 10639042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 1287937 - 1288126
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||  |||||||||||||  |||| || ||||  ||| |||||    
T  1287937 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccgatcggactgctgttcgata 1288036  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||    
T  1288037 gaactttcctttcaacttaaatggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatg 1288126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 34272956 - 34272767
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| | ||||||||||| |||||||||||  |||||||||||||  | ||| | ||||  ||||||||     
T  34272956 acatcctcatctctgctacacttacttgattctcatattgactcttaaccgcccaacactccgtaccatacaacaacgtcggccggactgctgtccgatt 34272857  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  34272856 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccattttaaccacccaacttgaatacgatg 34272767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 20318921 - 20318736
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| ||| |||||||  |||||||||||||  ||||||| ||||  | |||||||    
T  20318921 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcgcaacactccgtaccatacaacaacgccggtcggactgctatccgata 20318822  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
     ||| ||||||||| |||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  20318821 taactttcctttcaacttaagtggta----cttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatg 20318736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 3394585 - 3394453
Alignment:
Q  72 gtaccatacaacattgccggtctgactattgtccgatagaaccttcct---ttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttc 168  Q
    |||| ||||||||||||||||||||||  ||||||||||||| |||||   |||||||||||||||| ||||||||||||||||||| ||||||||| ||    
T  3394585 gtactatacaacattgccggtctgactgctgtccgatagaactttcctcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcatc 3394486  T
Q  169 tccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||||||||||||||||||||||||||||||    
T  3394485 tccatttcaaccacccagcttgaatacgatgat 3394453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 16347726 - 16347868
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||| ||| |||||||  ||||||||||| || | |||||||| | ||||||||||    
T  16347726 acatcctcatctccgctacacttacttaactctcgtgttggctcttaaccgctcaacactccgtaccatacaatatcgtcggtctgagtgttgtccgata 16347825  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaa 152  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||    
T  16347826 gaactttcctttcaacttaagtggtaatttcttattgcacaaa 16347868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 24178444 - 24178269
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||           ||||| |   ||||||||||  || ||||||    
T  24178444 acatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaaca-----------acaacgt---cggtctgactgctgcccgata 24178359  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||    
T  24178358 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccaacttgaatatgatg 24178269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 36200716 - 36200525
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||| ||| ||||||| | ||||  ||||  |||||| |||| | ||||||||| |||||||||||||| || ||||| ||||||| ||    
T  36200716 acatcctcatctctgatacgcttacttgattctcacgttggttcttaaccgcctaccactttgtatcatacaacattgccagtttgactgttgtccggta 36200617  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||  ||||||||| |||||   | ||||||||||| || ||||||  |||| ||||||||||||||||||||||| ||| |||| ||||||    
T  36200616 gaattttcctttcaacttaaacagcattttcttatcacataaaacacatgagtctcttctccatttcaaccacccaacttaaatatgatgat 36200525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 27808 - 27637
Alignment:
Q  30 cttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaa 129  Q
    ||||||| | |||| |||||  |||||| |||||||||||  |||||||||||||| | | ||| |||||||||| |||||||  ||||||||| |||||    
T  27808 cttacttaattctcatgttggttcttaaccgcccaacactccgtaccatacaacatcgtctgtccgactattgtcagatagaattttcctttcaacttaa 27709  T
Q  130 gtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||||| ||||||||| |  ||||||   ||| |||||||| ||||| |||||||| |||||||| ||||||    
T  27708 gtggtactttcttatcacgtaaaacactcgagactcttctctatttccaccacccaacttgaatatgatgat 27637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 17340871 - 17341005
Alignment:
Q  61 cccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctga 160  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||||| ||  ||| ||||| |||||| |||||| |||||   || || |||  |||    
T  17340871 cccaacactttgtatcatataacattgtcggtctgactattgtccgatacaattttcttttcaacttaagcggtattctcttacaacataagacacttga 17340970  T
Q  161 ggctcttctccatttcaaccacccagcttgaatac 195  Q
     |  ||||||||||||||||||| | |||||||||    
T  17340971 tgtccttctccatttcaaccacctaacttgaatac 17341005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 16347879 - 16347941
Alignment:
Q  138 ttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  16347879 ttcttattgcacaaaacacctgaggctcttctccatttcaaccaccta-cttgaatacgatgat 16347941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 16454644 - 16454606
Alignment:
Q  11 catcatcatctctgctacacttactttactctcgtgttg 49  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  16454644 catcctcatctctgctacacttactttactctcgtgttg 16454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 16779508 - 16779444
Alignment:
Q  118 ctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccac 182  Q
    |||||| ||| | ||||| |||| |||| || |||||||||||| ||||||||||||||||||||    
T  16779508 ctttcaacttgaatggtactttcgtatcacataaaacatctgagtctcttctccatttcaaccac 16779444  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 3097057 - 3096927
Alignment:
Q  62 ccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgag 161  Q
    |||||| ||||| || |||||||| | |||||| ||  |||| ||||| ||  |||||| || |||||| |||||||||  ||| || |||||| || ||    
T  3097057 ccaacattttgtcccgtacaacatcgtcggtcttaccgttgttcgataaaaatttcctt-caacttaagcggtattttcacatcacataaaacacctaag 3096959  T
Q  162 gctcttctccatttcaaccacccagcttgaat 193  Q
    |||||  ||||||||||||||||| |||||||    
T  3096958 gctctcatccatttcaaccacccaacttgaat 3096927  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 27302449 - 27302489
Alignment:
Q  161 ggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  27302449 ggctcttttccatttcaaccactcaacttgaatacgatgat 27302489  T

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Target: scaffold0570 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 2618 - 2808
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||||||||| | | || ||||||||||||| |||||||||||   ||||||||||||  | | ||||||||  |||||||||    
T  2618 acatcctcatctctgctacacttacttgattatcatgttgactcttaaccgcccaacactccataccatacaacaacgtcagtctgactgctgtccgata 2717  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatga 200  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2718 gaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatga 2808  T

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Target: scaffold0018 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 31394 - 31213
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgatagaaccttc 117  Q
    ||||||||||||||||||| | |||| ||||||||||||| | |||||||||  ||||| |||||||  ||||||||||||  ||| ||||||||| |||    
T  31394 atctctgctacacttacttgattctcatgttgactcttaaccacccaacactccgtaccgtacaacaccgccggtctgactgctgttcgatagaactttc 31295  T
Q  118 ctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
    |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  31294 ctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatg 31213  T

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Target: scaffold0024 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 82655 - 82464
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||| ||| ||||||||| | |||| ||||| ||||||| |||||||||||  ||||||||||| || | |||||||||| ||||||||||    
T  82655 acatcctcatctccgctgcacttacttgattctcatgttggctcttaaccgcccaacactccgtaccatacaagatcgtcggtctgactgttgtccgata 82556  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatgat 201  Q
    |||| ||||||||| ||||||  ||| |||||||||||||||||||  ||||||||||  ||||| ||||||||||||||||||||||||||    
T  82555 gaactttcctttcaacttaaggagtactttcttatcgcacaaaacacatgaggctctttcccattgcaaccacccagcttgaatacgatgat 82464  T

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Target: scaffold0113 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 11946 - 12135
Alignment:
Q  10 acatcatcatctctgctacacttactttactctcgtgttgactcttaaacgcccaacactttgtaccatacaacattgccggtctgactattgtccgata 109  Q
    ||||| ||||||||||||||| ||||| | |||| ||||||||||||  ||||||||| |||||||||| |||||   ||| ||||| |  || ||||||    
T  11946 acatcctcatctctgctacacatacttgattctcatgttgactcttacccgcccaacattttgtaccatgcaacaactccgttctgattgctgaccgata 12045  T
Q  110 gaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatg 199  Q
     ||| ||||||| | |||||| |||| |||||||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||||||    
T  12046 aaactttccttttaacttaagaggtactttcttatcgcacaaaacacttgaggttcttctccatttcaacgacccagcttaaatacgatg 12135  T

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Target: scaffold1493 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 29 - 107
Alignment:
Q  106 gatagaaccttcctttcagcttaagtggtattttcttatcgcacaaaacatctgaggctcttctccatttcaaccaccc 184  Q
    |||||||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccc 107  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 25801 - 25852
Alignment:
Q  18 atctctgctacacttactttactctcgtgttgactcttaaacgcccaacact 69  Q
    ||||||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  25801 atctctgctacacttacttgattctcatgttgactcttaaccgcccaacact 25852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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