View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8845_low_5 (Length: 207)
Name: NF8845_low_5
Description: NF8845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8845_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 41750922 - 41751098
Alignment:
| Q |
15 |
ttatactactcttacagttaggtatatgtccctaactctctgcatttttacttgttaatttgcatttaattaacatcatcattgatttcaatatcatatt |
114 |
Q |
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| T |
41750922 |
ttatactactcttacagttaggtatatgtccctaactctctgcatttttacatgttaatttgcatttaattaacatcatcattgatttcaatatcatatt |
41751021 |
T |
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| Q |
115 |
catgtacatacatgtacaatcaatatcaataattcattacgcagaactttgtcccaaattaaacgtatgttctttct |
191 |
Q |
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| T |
41751022 |
catgtacatacatgtacaatcaatatcaataattcattacgcagaactttgtcccaaattaaacgtatgttctttct |
41751098 |
T |
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