View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8846_low_10 (Length: 247)
Name: NF8846_low_10
Description: NF8846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8846_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9378168 - 9377927
Alignment:
| Q |
1 |
tattataatgtttccccttctatgtcgttgttaataaagcaggagaaacgtcaaagagaggaggagcatctaaatgtagcaacaataggacatcatcctt |
100 |
Q |
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| T |
9378168 |
tattatattgtttccccttctatgccgttgttaataaagcaggagaaacgtcaaagagaggaggagcatctaaatgtagcaacaataggacatcatcctt |
9378069 |
T |
|
| Q |
101 |
ctttttgtggtggagcaatgagaatcagaaatctcacattgtttagaaaagtaaactttgagcaagaaaaattcagattgtgatgggatccataaactca |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
9378068 |
ctttttatggtggagcaatgagaatcagaaatctcacattgtttagaaaagtaaactttgagcaagaataattcagattgtgatgggatccataaactca |
9377969 |
T |
|
| Q |
201 |
atggtttaagattttggataaagatatgatgtccatctcatt |
242 |
Q |
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|||||||||||||||||||||||||||||||| || |||||| |
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| T |
9377968 |
atggtttaagattttggataaagatatgatgttcaactcatt |
9377927 |
T |
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