View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8847_low_6 (Length: 203)
Name: NF8847_low_6
Description: NF8847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8847_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 18869071 - 18868891
Alignment:
| Q |
13 |
acaaataaattcctatgaagatattagttaccaattctcaacaaagtcaataggaactgtaagacatgttatcacctccatgaacactactgaagtcatc |
112 |
Q |
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| T |
18869071 |
acaaataaattcctatgaagatattagttaccaattctcaacatagttaataggaactgtaagacatgttatcacctccatgaacactactgaagtcatc |
18868972 |
T |
|
| Q |
113 |
atctgaatcggattctattatgtcaactgagtcaaaccatgcatcctcttggtatactcctgcaaaatgtacacaggttct |
193 |
Q |
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| T |
18868971 |
atctgaatcggattctattatgtcaactgagtcaaaccatgcatcctcttggtatactcctgcaaaatgtacacaagttct |
18868891 |
T |
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