View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8849_high_5 (Length: 228)
Name: NF8849_high_5
Description: NF8849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8849_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 21304023 - 21303832
Alignment:
| Q |
18 |
agagaatgagagtgaggttttaggaaaaactttaccctttccaattcatttctctccccttccttttctagggttttaaggttatttagggttccatttc |
117 |
Q |
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| T |
21304023 |
agagaatgagagtgaggttttaggaaaaactttaccctttccaattcatttctctccccttccttttctagggttttaaggttatttagggttccatttc |
21303924 |
T |
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| Q |
118 |
atttctttcaccccttnnnnnnnnnnnnnnnnnnnnnnnnnaccatggataggtatcagaaggttgaaaaacccaaacctgaaactcccatc |
209 |
Q |
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| T |
21303923 |
atttcattcacccctttctctctctacctctttctctctctaccatggataggtatcagaaggttgaaaaacccaaacctgaaactcccatc |
21303832 |
T |
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