View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8852_low_14 (Length: 255)

Name: NF8852_low_14
Description: NF8852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8852_low_14
NF8852_low_14
[»] chr5 (8 HSPs)
chr5 (3-227)||(5399085-5399309)
chr5 (137-212)||(19121283-19121358)
chr5 (161-212)||(17413526-17413577)
chr5 (175-214)||(18241397-18241436)
chr5 (157-212)||(35392144-35392199)
chr5 (177-212)||(41040985-41041020)
chr5 (137-212)||(42691629-42691704)
chr5 (180-212)||(43622711-43622743)
[»] scaffold0210 (2 HSPs)
scaffold0210 (135-226)||(17746-17837)
scaffold0210 (135-226)||(25638-25729)
[»] chr2 (8 HSPs)
chr2 (140-226)||(25882661-25882747)
chr2 (132-212)||(37995389-37995469)
chr2 (168-212)||(10128588-10128632)
chr2 (137-212)||(12008479-12008554)
chr2 (170-212)||(17069858-17069900)
chr2 (170-212)||(17075920-17075962)
chr2 (170-212)||(17096467-17096509)
chr2 (137-197)||(44240485-44240545)
[»] chr3 (9 HSPs)
chr3 (134-212)||(13495963-13496041)
chr3 (136-212)||(49067079-49067155)
chr3 (135-212)||(40823623-40823700)
chr3 (172-226)||(9764395-9764449)
chr3 (139-212)||(48314591-48314664)
chr3 (170-212)||(38362817-38362859)
chr3 (134-212)||(51657265-51657343)
chr3 (168-226)||(11586239-11586300)
chr3 (176-226)||(9770578-9770628)
[»] chr7 (13 HSPs)
chr7 (137-212)||(38029657-38029732)
chr7 (137-212)||(729028-729103)
chr7 (137-212)||(40462315-40462390)
chr7 (142-212)||(36159451-36159521)
chr7 (136-212)||(39703882-39703958)
chr7 (168-212)||(26455261-26455305)
chr7 (137-212)||(29322654-29322729)
chr7 (170-212)||(16718902-16718944)
chr7 (170-212)||(17693112-17693154)
chr7 (135-212)||(34405052-34405129)
chr7 (170-209)||(24396474-24396513)
chr7 (179-212)||(2732828-2732861)
chr7 (179-212)||(20078080-20078113)
[»] chr4 (15 HSPs)
chr4 (137-212)||(11653574-11653649)
chr4 (137-212)||(24539284-24539359)
chr4 (137-212)||(49748218-49748293)
chr4 (134-202)||(49357920-49357988)
chr4 (139-212)||(1326095-1326168)
chr4 (124-212)||(40682113-40682201)
chr4 (137-212)||(2527723-2527798)
chr4 (133-212)||(9061539-9061618)
chr4 (137-212)||(46420764-46420839)
chr4 (168-212)||(22455158-22455202)
chr4 (168-212)||(4875461-4875505)
chr4 (168-212)||(12758491-12758535)
chr4 (168-212)||(23633380-23633424)
chr4 (168-212)||(42351139-42351183)
chr4 (159-212)||(54243720-54243773)
[»] chr1 (5 HSPs)
chr1 (134-212)||(50290355-50290433)
chr1 (137-212)||(8998822-8998897)
chr1 (139-202)||(39268247-39268310)
chr1 (156-209)||(49193148-49193201)
chr1 (175-212)||(52407913-52407950)
[»] scaffold0090 (1 HSPs)
scaffold0090 (137-212)||(12588-12663)
[»] chr6 (1 HSPs)
chr6 (137-212)||(26898835-26898910)
[»] scaffold0891 (1 HSPs)
scaffold0891 (134-212)||(1256-1334)
[»] scaffold1155 (1 HSPs)
scaffold1155 (137-212)||(68-143)
[»] scaffold0642 (1 HSPs)
scaffold0642 (137-212)||(163-238)
[»] scaffold0345 (1 HSPs)
scaffold0345 (137-212)||(10074-10149)
[»] scaffold0105 (1 HSPs)
scaffold0105 (137-212)||(28831-28906)
[»] chr8 (5 HSPs)
chr8 (137-212)||(41842820-41842895)
chr8 (137-212)||(34893024-34893099)
chr8 (156-202)||(16913167-16913213)
chr8 (137-212)||(15096697-15096773)
chr8 (168-212)||(45261987-45262031)
[»] scaffold1449 (1 HSPs)
scaffold1449 (170-212)||(174-216)
[»] scaffold0246 (1 HSPs)
scaffold0246 (170-212)||(8829-8871)
[»] scaffold0044 (1 HSPs)
scaffold0044 (136-212)||(87849-87925)
[»] scaffold0108 (1 HSPs)
scaffold0108 (134-212)||(13599-13676)


Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 5399309 - 5399085
Alignment:
Q  3 tgtgtgacacctcgtatgatggaatggaaccaactaatgaagtttttcttgcatcatctacaatttttcttgcatcatatgcaataaatctcaagaccag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5399309 tgtgtgacacctcgtatgatggaatggaaccaactaatgaagtttttcttgcatcatctacaatttttcttgcatcatatgcagtaaatctcaagaccag 5399210  T
Q  103 gcttatcttttaggctacaattttttgatattatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaa 202  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  5399209 gcttatcttttaggctacagtttttttatattatactagaccatcgatccatactaacgcacacgtcatatcgaaggtaatatttgacggtaataggtaa 5399110  T
Q  203 taaaatagttaggttaagtataatc 227  Q
     ||||||||||||||||||||||||    
T  5399109 caaaatagttaggttaagtataatc 5399085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 19121283 - 19121358
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | |||||||||   |||||| ||||||||||||| |||||||||||||| |||||||||    
T  19121283 actagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttcacggtaataggtaacaaaatagtt 19121358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 17413526 - 17413577
Alignment:
Q  161 gcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  17413526 gcacggatcatatggaaggtaatatttgacggtaataggtaacaaaatagtt 17413577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 18241397 - 18241436
Alignment:
Q  175 gaaggtaatatttgacggtaataggtaataaaatagttag 214  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  18241397 gaaggtaatatttgacggtaataggtaacaaaatatttag 18241436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 35392144 - 35392199
Alignment:
Q  157 taacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||  | |||| ||| |||||||||||||||||||||||| |||||||||    
T  35392144 taacgcacgggtgatatggaaagtaatatttgacggtaataggtaacaaaatagtt 35392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 41040985 - 41041020
Alignment:
Q  177 aggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  41040985 aggtaatatttgacggtaataggtaacaaaatagtt 41041020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 42691629 - 42691704
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | ||||||||||  |||||| ||||||||||||||| ||| |||  ||| |||||||||    
T  42691629 actagaccatcgacctgtgctaacgcacgagtcatatggaaggtaatatttgatggtgatatctaacaaaatagtt 42691704  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 43622743 - 43622711
Alignment:
Q  180 taatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||||||| |||||||||    
T  43622743 taatatttgacggtaataggtaacaaaatagtt 43622711  T

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Target: scaffold0210 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 17837 - 17746
Alignment:
Q  135 atactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagttaggttaagtataat 226  Q
    |||||||||||||||||| | |||| |||||  |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  17837 atactagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagttaggttaagtataat 17746  T

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Target: scaffold0210; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 25729 - 25638
Alignment:
Q  135 atactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagttaggttaagtataat 226  Q
    |||||||||||||||||| | |||| |||||  |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  25729 atactagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagttaggttaagtataat 25638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 25882661 - 25882747
Alignment:
Q  140 agaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagttaggttaagtataat 226  Q
    |||||||| |||| | |||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25882661 agaccatcaacccgtgctaacgcacatgtcatatcgaaggtaatatttgacggtaataggtaacaaaatagttaggttaagtataat 25882747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 37995469 - 37995389
Alignment:
Q  132 attatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||||| | ||||| |||| ||||||| |||||||||||||||||||| ||||||| |||||||||    
T  37995469 attatactagaccatcgacccgtgctaacacacggatcatatggaaggtaatatttgacggtagtaggtaacaaaatagtt 37995389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 10128588 - 10128632
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  10128588 tcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 10128632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 12008479 - 12008554
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||| ||||| | ||||| ||||  ||||||||||||||||||||||| ||||||| ||| |||||||||    
T  12008479 actagaccattgacccgtgctaacacacgggtcatatcgaaggtaatatttgacagtaatagataacaaaatagtt 12008554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 17069900 - 17069858
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  17069900 atatggaaggtaatatttgacggtaataggtaacaaaatagtt 17069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 17075962 - 17075920
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  17075962 atatggaaggtaatatttgacggtaataggtaacaaaatagtt 17075920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 17096509 - 17096467
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| ||||||||||||| |||||||||||||| |||||||||    
T  17096509 atatggaaggtaatattttacggtaataggtaacaaaatagtt 17096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 44240485 - 44240545
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaata 197  Q
    |||| |||||||| || ||| |||||| |  |||||| |||||||||||||||||||||||    
T  44240485 actataccatcgatccgtaccaacgcatgagtcatattgaaggtaatatttgacggtaata 44240545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 13496041 - 13495963
Alignment:
Q  134 tatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||| | |||||| | |  |||||||||||||||||||||||||||||||||||||||||||||    
T  13496041 tatactagaccatcgacccgtgctaacgtaagggtcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 13495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 49067079 - 49067155
Alignment:
Q  136 tactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||| | ||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||    
T  49067079 tactagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtt 49067155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 40823700 - 40823623
Alignment:
Q  135 atactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||||| | |||| |||||  |||||| |||||||||||||||| ||||||||||| |||||||||    
T  40823700 atactagaccatcgacccgtgctaaggcacgggtcatatggaaggtaatatttgaccgtaataggtaaaaaaatagtt 40823623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 9764395 - 9764449
Alignment:
Q  172 atcgaaggtaatatttgacggtaataggtaataaaatagttaggttaagtataat 226  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  9764395 atcgaaggtaatatttgacggtaataggtaacaaaatatttaggttaaatataat 9764449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 48314664 - 48314591
Alignment:
Q  139 tagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| ||||||||| | |||||| |||  |||||| |||||||||||||||||||||||||||| |||||||||    
T  48314664 tagatcatcgacccgtgctaacgtacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtt 48314591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 38362859 - 38362817
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  38362859 atatcgaaggtaatatttgacggtaatatgtaataaaatagtt 38362817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 51657343 - 51657265
Alignment:
Q  134 tatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||| | |||||||||   |||||| ||||||||||||||| ||||| | |||| |||||||||    
T  51657343 tatactagaccatcgacccgtgctaacgcacatgtcatatggaaggtaatatttgagggtaacaagtaacaaaatagtt 51657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 11586300 - 11586239
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataa---aatagttaggttaagtataat 226  Q
    |||||||||||||||||| ||| || |||| |||||||   |||||||||||||||||||||    
T  11586300 tcatatcgaaggtaatatatgatggaaataagtaataataaaatagttaggttaagtataat 11586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 9770578 - 9770628
Alignment:
Q  176 aaggtaatatttgacggtaataggtaataaaatagttaggttaagtataat 226  Q
    ||||| |||||| |||||||||||||| |||||| ||||||| ||||||||    
T  9770578 aaggtgatatttaacggtaataggtaacaaaatatttaggttcagtataat 9770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 38029732 - 38029657
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | ||||| |||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  38029732 actagaccatcgacccgtgctaacacacggatcatattgaaggtaatatttgacggtaataggtaacaaaatagtt 38029657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 729103 - 729028
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | |||||| |||  |||||||||||||||||||||||||||||||||||  ||||||||    
T  729103 actagaccatcgacccgtgctaacgtacgggtcatatcgaaggtaatatttgacggtaataggtaaccaaatagtt 729028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 40462315 - 40462390
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | ||||||||||  ||||||  |||||||||||||| |||||| |||||||||||||||    
T  40462315 actagaccatcgacccgtgctaacgcacgggtcatatgaaaggtaatatttgatggtaattggtaataaaatagtt 40462390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 36159521 - 36159451
Alignment:
Q  142 accatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||| | ||||||||||  ||||||  ||||||||||||||||||||||||||| |||||||||    
T  36159521 accatcgacccgtgctaacgcacgagtcatatgaaaggtaatatttgacggtaataggtaacaaaatagtt 36159451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 39703882 - 39703958
Alignment:
Q  136 tactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||| | ||||||||||  |||| |||||||||| || |||||||||||||||  |||||||||    
T  39703882 tactagaccatcgacccgtgctaacgcacgggtcatttcgaaggtaaaatatgacggtaataggtagcaaaatagtt 39703958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 26455305 - 26455261
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  26455305 tcatatcgaaggtaatatttgacggtaatagataacaaaatagtt 26455261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 29322729 - 29322654
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||| |||| | |||||||||   |||||| |||||||||||||||||||||||| ||| |||||||||    
T  29322729 actaaaccatctacccgtgctaacgcaccggtcatatggaaggtaatatttgacggtaatagataacaaaatagtt 29322654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 16718944 - 16718902
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  16718944 atatggaaggtaatatttgacggtaataggtaacaaaatagtt 16718902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 17693154 - 17693112
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  17693154 atatggaaggtaatatttgacggtaataggtaacaaaatagtt 17693112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 34405052 - 34405129
Alignment:
Q  135 atactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | | |||||| |||  | |||| ||||||||||||||||||||||| |||| |||||||||    
T  34405052 atactagaccatcgattcgtgctaacgtacgggtaatatggaaggtaatatttgacggtaataagtaacaaaatagtt 34405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 24396474 - 24396513
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaata 209  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  24396474 atatggaaggtaatatttgacggtaataggtaacaaaata 24396513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 2732828 - 2732861
Alignment:
Q  179 gtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||||||||||| |||||||||    
T  2732828 gtaatatttgacggtaataggtaacaaaatagtt 2732861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 20078113 - 20078080
Alignment:
Q  179 gtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||||||||||| |||||||||    
T  20078113 gtaatatttgacggtaataggtaacaaaatagtt 20078080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 11653574 - 11653649
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||| ||||||||| | |||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  11653574 actagatcatcgacccgtgctaatgcacgggtcatatggaaggtaatatttgacggtaataggtaataaaatagtt 11653649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 24539359 - 24539284
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | ||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||    
T  24539359 actagaccatcgaccagtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtt 24539284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 49748218 - 49748293
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | ||||||||||  |||||| |||||||||||||||||||||||||||  |||||||||    
T  49748218 actagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtagcaaaatagtt 49748293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 49357988 - 49357920
Alignment:
Q  134 tatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaa 202  Q
    ||||||||||||||||||| | |||||||||   |||||| ||||||||||||||||||||||||||||    
T  49357988 tatactagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttgacggtaataggtaa 49357920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 1326168 - 1326095
Alignment:
Q  139 tagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||| | ||| ||||||| ||||||||||||||||||||||| |||| | |||| |||||||||    
T  1326168 tagaccatcgacccgtgctatcgcacgcgtcatatcgaaggtaatatttgacagtaacatgtaacaaaatagtt 1326095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 40682113 - 40682201
Alignment:
Q  124 tttttgatattatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||| |||| | |||||| ||| ||||||| ||||||||||   ||||||||||||||||||| |||| ||||||||| |||||||||    
T  40682113 tttttaatataaaactagatcattgacccatgctaacgcacgggacatatcgaaggtaatatttaacggcaataggtaacaaaatagtt 40682201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 2527798 - 2527723
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||| || | |||||||||   |||||| |||||||||||||||||||||||| ||| |||||||||    
T  2527798 actagaccatcgatccgtgctaacgcacatgtcatatggaaggtaatatttgacggtaatagataacaaaatagtt 2527723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 9061618 - 9061539
Alignment:
Q  133 ttatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||||||| | ||||||||    |||||| ||| ||||||||| |||||||||||||| |||||||||    
T  9061618 ttatactagaccatcgacccgtgctaacgcataggtcatatggaatgtaatatttaacggtaataggtaacaaaatagtt 9061539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 46420839 - 46420764
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||| || | |||| ||||   |||||| |||||||||||||||||||||||||||| |||||||||    
T  46420839 actagaccatcgatccgtgctaatgcacaagtcatatggaaggtaatatttgacggtaataggtaacaaaatagtt 46420764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 22455202 - 22455158
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  22455202 tcatatggaaggtaatatttgacggtaataagtaataaaatagtt 22455158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 4875461 - 4875505
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||    
T  4875461 tcatatggaaggtaatatttgacgttaataggtaacaaaatagtt 4875505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 12758491 - 12758535
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||    
T  12758491 tcatatggaaggtaatatttgacggtaataagtaacaaaatagtt 12758535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 23633380 - 23633424
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||    
T  23633380 tcataccgaaggtaatatttgacggtaatagataacaaaatagtt 23633424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 42351183 - 42351139
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||    
T  42351183 tcatatggaaggtaatatttgacggtaatagataacaaaatagtt 42351139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 54243773 - 54243720
Alignment:
Q  159 acgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||  |||||| |||| |||||||||||| |||||||||| |||||||||    
T  54243773 acgcacgggtcatatggaagttaatatttgacgataataggtaacaaaatagtt 54243720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 50290433 - 50290355
Alignment:
Q  134 tatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||| | ||||||||||  |||||| ||| |||||||||||||||||||||||  |||||||||    
T  50290433 tatactagaccatcgacccgtgctaacgcacgggtcatatggaacgtaatatttgacggtaataggtagaaaaatagtt 50290355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 8998897 - 8998822
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||| ||||| | |||||||||   |||||||||| |||||||||||||||||||||||| |||||||||    
T  8998897 actagaccattgacccgtgctaacgcacaggtcatatcgaatgtaatatttgacggtaataggtaacaaaatagtt 8998822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 39268247 - 39268310
Alignment:
Q  139 tagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaa 202  Q
    ||||||||||||||   ||||||||||  |||||||||| ||||||||||||| ||||||||||    
T  39268247 tagaccatcgacccgcgctaacgcacgggtcatatcgaatgtaatatttgacgataataggtaa 39268310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 49193148 - 49193201
Alignment:
Q  156 ctaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaata 209  Q
    ||||||||||  |||||| ||| |||||||||||||||||||||||| ||||||    
T  49193148 ctaacgcacgtgtcatattgaatgtaatatttgacggtaataggtaacaaaata 49193201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 52407913 - 52407950
Alignment:
Q  175 gaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  52407913 gaaggtaacatttgacggtaataggtaacaaaatagtt 52407950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 12588 - 12663
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | |||| |||||  |||||| ||| |||||||||||||||||||||||| |||||||||    
T  12588 actagaccatcgacccgtgctaatgcacgggtcatatggaatgtaatatttgacggtaataggtaacaaaatagtt 12663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 26898835 - 26898910
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | ||| | ||||  |||||| |||||||||||||||||||||||||||| |||||||||    
T  26898835 actagaccatcgacccgtgctaccacacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtt 26898910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 1256 - 1334
Alignment:
Q  134 tatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| || | ||||||||||  |||||| |||||||||||||||| ||||||| ||| |||||||||    
T  1256 tatactagaccatcgatccgtgctaacgcacgggtcatatggaaggtaatatttgacagtaatagataacaaaatagtt 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 68 - 143
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | ||||||||||  | ||||||||||||||||| |||||||||||||||  ||||||||    
T  68 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtt 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 238 - 163
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | ||||||||||  | ||||||||||||||||| |||||||||||||||  ||||||||    
T  238 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 10149 - 10074
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | ||||||||||  | ||||||||||||||||| |||||||||||||||  ||||||||    
T  10149 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtt 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 28831 - 28906
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||  | ||||||||||  | ||||||||||||||||| |||||||||||||||  ||||||||    
T  28831 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtt 28906  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 41842820 - 41842895
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||||||||| | |||| ||||   |||||| ||| ||||||| |||||||||||||||| |||||||||    
T  41842820 actagaccatcgacccgtgctaatgcacaggtcatatggaaagtaatatctgacggtaataggtaacaaaatagtt 41842895  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 34893024 - 34893099
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||| ||||| | |||||||||   |||||  || ||||||||||||||||||||||||| |||| ||||    
T  34893024 actagaccattgacccgtgctaacgcacaagtcataaggagggtaatatttgacggtaataggtaacaaaacagtt 34893099  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 16913167 - 16913213
Alignment:
Q  156 ctaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaa 202  Q
    ||||||||||  |||||| ||||||||||||||||||||||| ||||    
T  16913167 ctaacgcacgggtcatatggaaggtaatatttgacggtaatatgtaa 16913213  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 15096697 - 15096773
Alignment:
Q  137 actagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaatagg-taataaaatagtt 212  Q
    ||||||| ||||| |||  |||||| |||  | |||||||||||||||||||| ||||||||| ||| |||||||||    
T  15096697 actagactatcgaaccaagctaacgtacgggttatatcgaaggtaatatttgatggtaataggttaaaaaaatagtt 15096773  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 45261987 - 45262031
Alignment:
Q  168 tcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||||  |||||||||| ||||||||||||| |||||||||    
T  45261987 tcatatcgattgtaatatttgtcggtaataggtaacaaaatagtt 45262031  T

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Target: scaffold1449 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 216 - 174
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  216 atatggaaggtaatatttgacggtaataggtaacaaaatagtt 174  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 8829 - 8871
Alignment:
Q  170 atatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  8829 atatggaaggtaatatttgacggtaataggtaacaaaatagtt 8871  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 87925 - 87849
Alignment:
Q  136 tactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    |||||||| ||||| || | ||||||||||  ||||||  ||| |||||||||||||||||| |||| |||||||||    
T  87925 tactagactatcgatccttgctaacgcacgagtcatatgaaagataatatttgacggtaatatgtaacaaaatagtt 87849  T

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Target: scaffold0108 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 13599 - 13676
Alignment:
Q  134 tatactagaccatcgacccatactaacgcacgcatcatatcgaaggtaatatttgacggtaataggtaataaaatagtt 212  Q
    ||||||||||||||||||| | |||||||||   | ||||||||| | |||||||| |||||||| ||| |||||||||    
T  13599 tatactagaccatcgacccgtgctaacgcacaggttatatcgaagat-atatttgatggtaatagataacaaaatagtt 13676  T

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