View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8853_low_21 (Length: 250)
Name: NF8853_low_21
Description: NF8853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8853_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 37113848 - 37114084
Alignment:
| Q |
1 |
ctattttcactaaagaaacttgtatcagtagagtagtttcttttgaatgcaggtgagtgagttaatagtttggtaatat----atacagtatatgttgct |
96 |
Q |
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| T |
37113848 |
ctattttcactaaagaagcttgtatcagtagagtagtttcttttgaatgcaggtgagtgagttaatagtttggtaatatatatatacagtaaatgttgct |
37113947 |
T |
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| Q |
97 |
tatttttgcgataataagcaccgtgaaattcgcacttcttgttgcgtgaggttacgaagaatttgttaaggaattagccggagaatactgttaataataa |
196 |
Q |
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| T |
37113948 |
tatttttgcgatattaagcaccatgaaattcgcacttcttgttgcgtgaggttacgaagaatttgttaaggaattagccggagaatactgttaataataa |
37114047 |
T |
|
| Q |
197 |
tatattatgtttgttacatgcatcattaaaagataag |
233 |
Q |
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| T |
37114048 |
tatattatgtttgttacatgcatcattaaaagataag |
37114084 |
T |
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