View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8854_high_1 (Length: 258)
Name: NF8854_high_1
Description: NF8854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8854_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 28479414 - 28479652
Alignment:
| Q |
1 |
ttatttatgtatattgtaagttccatctttcatgtagttcatgtattaattagataatgtttttgcatttcaattgtagcttaaattgactataagctca |
100 |
Q |
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| T |
28479414 |
ttatttatgtatattgtaagttccatctttcatgtagttcatgtattaattagataatgtttttgcatttcaattgtagcttaaattgactataagctca |
28479513 |
T |
|
| Q |
101 |
atattttaannnnnnnnnccataaagtatctaatgtcatgcaggccacaatatttcattatggttcagttagcttaattaaggagccttctaggtcaact |
200 |
Q |
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| T |
28479514 |
atattttaatttttttttccataaagtatctaatgtcatgcaggccacaatatttcattatggttcagttagcttaattaaggagccttctaggtcaact |
28479613 |
T |
|
| Q |
201 |
cacattgaagcaataaattatgccaaaatgtgtggtagt |
239 |
Q |
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| T |
28479614 |
cacattgaagcaataaattatgccaaaatgtgtggtagt |
28479652 |
T |
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