View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8858_low_14 (Length: 239)
Name: NF8858_low_14
Description: NF8858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8858_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6459448 - 6459664
Alignment:
| Q |
1 |
ttggtgtagtaggagaaagacaatggtatttatagatggaagataatgtatccacgctctaccacatatannnnnnnaattggaagataagctccacgtg |
100 |
Q |
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| T |
6459448 |
ttggtgtagtaggagaaagccaatggtatttatagatggaagataatgtatccacgctctaccacatatatttttttaattggaagataagctccacgtg |
6459547 |
T |
|
| Q |
101 |
ccaaacgtgaaataaatactatnnnnnnncttaattgtactgttattctttagattatgagatatcttttacaaatatatgatatgataaaatttctttc |
200 |
Q |
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| T |
6459548 |
ccaaacgtg----aaatactataaaaaaacttaattgtactgttattctttagattataagatatcttttataaatatatgatatgataaaatttctttc |
6459643 |
T |
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| Q |
201 |
tgtttgcctttggataaaagt |
221 |
Q |
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|||||| || ||||||||||| |
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| T |
6459644 |
tgtttggctctggataaaagt |
6459664 |
T |
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