View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8861_low_25 (Length: 238)

Name: NF8861_low_25
Description: NF8861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8861_low_25
NF8861_low_25
[»] scaffold0035 (2 HSPs)
scaffold0035 (178-238)||(118039-118099)
scaffold0035 (178-238)||(109538-109598)
[»] scaffold0338 (1 HSPs)
scaffold0338 (178-238)||(9098-9158)
[»] chr7 (32 HSPs)
chr7 (178-238)||(11287528-11287588)
chr7 (181-237)||(7284137-7284193)
chr7 (28-110)||(13377489-13377572)
chr7 (180-238)||(26070340-26070398)
chr7 (180-238)||(26094127-26094185)
chr7 (31-106)||(3894988-3895064)
chr7 (178-238)||(3895136-3895196)
chr7 (27-110)||(32494258-32494342)
chr7 (179-238)||(12369916-12369975)
chr7 (28-109)||(15358758-15358839)
chr7 (27-110)||(26070468-26070552)
chr7 (27-110)||(26094255-26094339)
chr7 (27-101)||(13863143-13863218)
chr7 (178-238)||(12248196-12248257)
chr7 (178-238)||(13863005-13863066)
chr7 (178-238)||(16570081-16570142)
chr7 (178-238)||(16595520-16595581)
chr7 (44-109)||(20583759-20583824)
chr7 (44-109)||(31501150-31501215)
chr7 (40-109)||(34241393-34241462)
chr7 (31-110)||(111481-111560)
chr7 (39-110)||(11287389-11287460)
chr7 (178-217)||(15822528-15822567)
chr7 (178-216)||(143750-143788)
chr7 (28-109)||(4484687-4484769)
chr7 (178-216)||(12759098-12759136)
chr7 (40-110)||(17224142-17224212)
chr7 (28-109)||(38424179-38424261)
chr7 (178-216)||(47289892-47289930)
chr7 (179-216)||(44865342-44865379)
chr7 (40-109)||(48356617-48356686)
chr7 (186-238)||(45452244-45452296)
[»] chr4 (20 HSPs)
chr4 (178-238)||(16732280-16732340)
chr4 (178-238)||(12837276-12837336)
chr4 (178-238)||(45458931-45458991)
chr4 (27-109)||(52265713-52265796)
chr4 (15-55)||(819989-820029)
chr4 (28-110)||(15044788-15044871)
chr4 (28-110)||(15109553-15109636)
chr4 (178-233)||(21959544-21959599)
chr4 (182-238)||(30458018-30458074)
chr4 (40-99)||(40905148-40905207)
chr4 (179-238)||(44056027-44056086)
chr4 (179-237)||(8872549-8872606)
chr4 (179-237)||(53704811-53704868)
chr4 (40-109)||(7964916-7964985)
chr4 (178-238)||(13809586-13809646)
chr4 (27-75)||(15851595-15851644)
chr4 (179-216)||(34395369-34395406)
chr4 (44-109)||(38764686-38764751)
chr4 (40-109)||(41256574-41256643)
chr4 (179-215)||(820015-820051)
[»] chr6 (17 HSPs)
chr6 (178-238)||(31628379-31628439)
chr6 (178-238)||(18777257-18777317)
chr6 (178-238)||(18570390-18570450)
chr6 (179-238)||(32898902-32898961)
chr6 (39-106)||(18777118-18777185)
chr6 (27-109)||(25651196-25651279)
chr6 (30-106)||(15742439-15742516)
chr6 (40-109)||(18629816-18629885)
chr6 (178-238)||(18432754-18432814)
chr6 (178-238)||(21411126-21411185)
chr6 (179-238)||(22441046-22441105)
chr6 (28-109)||(17083383-17083465)
chr6 (181-238)||(16086131-16086188)
chr6 (181-238)||(16106630-16106687)
chr6 (40-109)||(18381888-18381957)
chr6 (77-110)||(18432653-18432686)
chr6 (40-109)||(33538574-33538643)
[»] chr1 (13 HSPs)
chr1 (178-238)||(9784140-9784200)
chr1 (28-109)||(8538115-8538196)
chr1 (28-109)||(8603354-8603435)
chr1 (178-238)||(21718339-21718399)
chr1 (178-238)||(35054867-35054927)
chr1 (27-106)||(35054715-35054795)
chr1 (180-238)||(51627740-51627798)
chr1 (40-109)||(21194987-21195056)
chr1 (38-109)||(22143566-22143637)
chr1 (28-109)||(17608889-17608970)
chr1 (179-216)||(22403208-22403245)
chr1 (181-238)||(49967764-49967821)
chr1 (31-110)||(21859974-21860054)
[»] chr3 (40 HSPs)
chr3 (19-92)||(12349766-12349839)
chr3 (178-238)||(12349615-12349675)
chr3 (178-238)||(54424123-54424183)
chr3 (178-238)||(17938685-17938745)
chr3 (27-110)||(45581590-45581674)
chr3 (28-110)||(12488930-12489013)
chr3 (178-238)||(14295549-14295610)
chr3 (178-238)||(14301176-14301237)
chr3 (178-238)||(8631901-8631961)
chr3 (178-238)||(17522965-17523025)
chr3 (179-238)||(50112127-50112186)
chr3 (178-235)||(11061084-11061142)
chr3 (181-238)||(19260915-19260972)
chr3 (30-110)||(54038336-54038417)
chr3 (178-238)||(17100764-17100824)
chr3 (178-238)||(17101449-17101509)
chr3 (31-110)||(28558169-28558249)
chr3 (27-106)||(38167873-38167953)
chr3 (27-109)||(11061211-11061294)
chr3 (28-109)||(6228830-6228912)
chr3 (28-109)||(12952924-12953006)
chr3 (30-106)||(23492335-23492412)
chr3 (30-110)||(54423975-54424055)
chr3 (28-110)||(8631751-8631833)
chr3 (179-238)||(34439419-34439478)
chr3 (188-238)||(3578210-3578260)
chr3 (45-103)||(14814976-14815034)
chr3 (179-237)||(16996137-16996194)
chr3 (178-216)||(35123807-35123845)
chr3 (179-216)||(6154429-6154466)
chr3 (40-109)||(9590959-9591028)
chr3 (178-238)||(11329037-11329097)
chr3 (28-104)||(33369118-33369195)
chr3 (40-109)||(34559872-34559941)
chr3 (40-109)||(39656499-39656568)
chr3 (179-216)||(53898553-53898590)
chr3 (45-109)||(3576643-3576707)
chr3 (39-106)||(3992521-3992589)
chr3 (178-210)||(14298532-14298564)
chr3 (178-210)||(14304159-14304191)
[»] scaffold0160 (1 HSPs)
scaffold0160 (178-238)||(132-192)
[»] scaffold0120 (3 HSPs)
scaffold0120 (178-238)||(21623-21683)
scaffold0120 (181-237)||(31325-31381)
scaffold0120 (40-110)||(31184-31254)
[»] scaffold0103 (1 HSPs)
scaffold0103 (178-238)||(33773-33833)
[»] scaffold0022 (1 HSPs)
scaffold0022 (178-238)||(112621-112681)
[»] chr8 (22 HSPs)
chr8 (178-238)||(20561707-20561767)
chr8 (178-238)||(20647905-20647965)
chr8 (178-238)||(20653981-20654041)
chr8 (27-106)||(20481564-20481644)
chr8 (28-109)||(38635853-38635932)
chr8 (40-109)||(23149754-23149823)
chr8 (30-106)||(274405-274482)
chr8 (30-106)||(641367-641444)
chr8 (30-106)||(827173-827250)
chr8 (40-109)||(23158136-23158205)
chr8 (40-109)||(26011467-26011536)
chr8 (40-109)||(27233272-27233341)
chr8 (27-106)||(16039097-16039177)
chr8 (40-75)||(37653853-37653888)
chr8 (28-109)||(33611258-33611340)
chr8 (178-216)||(37611779-37611817)
chr8 (40-109)||(5854587-5854656)
chr8 (181-238)||(20481719-20481776)
chr8 (178-238)||(22981384-22981444)
chr8 (32-71)||(25296145-25296185)
chr8 (32-71)||(25758165-25758205)
chr8 (26-110)||(39115234-39115318)
[»] scaffold0310 (2 HSPs)
scaffold0310 (180-238)||(190-248)
scaffold0310 (180-238)||(6484-6542)
[»] scaffold0075 (1 HSPs)
scaffold0075 (180-238)||(5054-5112)
[»] scaffold1164 (1 HSPs)
scaffold1164 (180-237)||(1494-1551)
[»] scaffold0610 (1 HSPs)
scaffold0610 (178-238)||(652-712)
[»] scaffold0014 (1 HSPs)
scaffold0014 (178-238)||(85443-85503)
[»] scaffold0012 (1 HSPs)
scaffold0012 (178-234)||(253069-253125)
[»] chr5 (18 HSPs)
chr5 (31-110)||(23493882-23493962)
chr5 (179-238)||(1168280-1168339)
chr5 (27-106)||(20712035-20712115)
chr5 (28-110)||(3673822-3673905)
chr5 (180-238)||(11337262-11337320)
chr5 (44-109)||(6456601-6456666)
chr5 (178-238)||(20712187-20712247)
chr5 (178-216)||(11584165-11584203)
chr5 (178-216)||(24183230-24183268)
chr5 (28-75)||(5451082-5451130)
chr5 (28-110)||(1168408-1168491)
chr5 (191-238)||(19405662-19405709)
chr5 (28-109)||(432423-432505)
chr5 (180-238)||(16595621-16595678)
chr5 (30-106)||(21204887-21204965)
chr5 (179-216)||(21397204-21397241)
chr5 (30-106)||(21650657-21650734)
chr5 (41-109)||(19862183-19862251)
[»] chr2 (15 HSPs)
chr2 (178-238)||(25602135-25602195)
chr2 (178-238)||(27261915-27261974)
chr2 (27-104)||(67951-68029)
chr2 (178-238)||(28974160-28974220)
chr2 (178-238)||(36890761-36890821)
chr2 (27-109)||(23821810-23821893)
chr2 (27-109)||(23830889-23830972)
chr2 (27-110)||(36890889-36890973)
chr2 (47-110)||(28974029-28974092)
chr2 (180-238)||(271283-271341)
chr2 (31-106)||(9653112-9653189)
chr2 (40-109)||(19433537-19433606)
chr2 (44-109)||(19669314-19669379)
chr2 (28-73)||(23774100-23774145)
chr2 (178-210)||(4448237-4448269)
[»] scaffold0001 (2 HSPs)
scaffold0001 (179-238)||(70698-70757)
scaffold0001 (178-238)||(60917-60977)
[»] scaffold0039 (2 HSPs)
scaffold0039 (27-110)||(19113-19197)
scaffold0039 (39-110)||(12732-12803)
[»] scaffold0025 (2 HSPs)
scaffold0025 (178-238)||(146712-146772)
scaffold0025 (27-106)||(146560-146640)
[»] scaffold0021 (2 HSPs)
scaffold0021 (178-238)||(88386-88446)
scaffold0021 (179-237)||(132327-132385)
[»] scaffold0243 (1 HSPs)
scaffold0243 (28-110)||(2520-2603)
[»] scaffold0240 (1 HSPs)
scaffold0240 (179-238)||(7681-7740)
[»] scaffold0034 (3 HSPs)
scaffold0034 (27-109)||(46124-46207)
scaffold0034 (44-110)||(79841-79907)
scaffold0034 (26-109)||(40616-40700)
[»] scaffold0008 (1 HSPs)
scaffold0008 (179-238)||(22803-22862)
[»] scaffold0970 (1 HSPs)
scaffold0970 (32-109)||(2419-2497)
[»] scaffold0026 (1 HSPs)
scaffold0026 (28-109)||(90049-90131)
[»] scaffold0574 (1 HSPs)
scaffold0574 (30-106)||(9723-9800)
[»] scaffold0521 (1 HSPs)
scaffold0521 (27-104)||(11054-11131)
[»] scaffold0193 (1 HSPs)
scaffold0193 (28-109)||(4566-4647)
[»] scaffold0117 (1 HSPs)
scaffold0117 (178-238)||(11644-11704)
[»] scaffold0077 (2 HSPs)
scaffold0077 (27-106)||(15682-15762)
scaffold0077 (28-109)||(6504-6586)
[»] scaffold0037 (3 HSPs)
scaffold0037 (178-238)||(24804-24864)
scaffold0037 (31-106)||(24936-25012)
scaffold0037 (30-106)||(94937-95014)
[»] scaffold0673 (1 HSPs)
scaffold0673 (179-238)||(898-957)
[»] scaffold0447 (4 HSPs)
scaffold0447 (27-109)||(4522-4605)
scaffold0447 (27-109)||(9136-9219)
scaffold0447 (178-238)||(4674-4735)
scaffold0447 (178-238)||(9288-9349)
[»] scaffold0396 (1 HSPs)
scaffold0396 (179-238)||(11784-11843)
[»] scaffold0383 (2 HSPs)
scaffold0383 (27-109)||(7130-7213)
scaffold0383 (178-238)||(7283-7344)
[»] scaffold0342 (2 HSPs)
scaffold0342 (27-109)||(5899-5982)
scaffold0342 (188-238)||(6062-6113)
[»] scaffold0044 (1 HSPs)
scaffold0044 (179-238)||(38410-38469)
[»] scaffold1867 (2 HSPs)
scaffold1867 (178-216)||(255-293)
scaffold1867 (40-110)||(118-187)
[»] scaffold0597 (1 HSPs)
scaffold0597 (30-106)||(1194-1272)
[»] scaffold0190 (1 HSPs)
scaffold0190 (178-216)||(10048-10086)
[»] scaffold0032 (2 HSPs)
scaffold0032 (30-106)||(55542-55620)
scaffold0032 (44-109)||(104827-104892)
[»] scaffold0554 (1 HSPs)
scaffold0554 (178-238)||(2026-2087)
[»] scaffold0387 (1 HSPs)
scaffold0387 (44-109)||(1151-1216)
[»] scaffold0253 (2 HSPs)
scaffold0253 (28-104)||(7362-7439)
scaffold0253 (28-104)||(16787-16864)
[»] scaffold0244 (1 HSPs)
scaffold0244 (30-106)||(22720-22797)
[»] scaffold0080 (2 HSPs)
scaffold0080 (40-109)||(44003-44072)
scaffold0080 (28-78)||(23908-23959)
[»] scaffold0031 (2 HSPs)
scaffold0031 (178-238)||(70724-70785)
scaffold0031 (191-238)||(31168-31215)
[»] scaffold0706 (1 HSPs)
scaffold0706 (42-106)||(6759-6823)
[»] scaffold0359 (1 HSPs)
scaffold0359 (178-238)||(1428-1488)
[»] scaffold0158 (2 HSPs)
scaffold0158 (180-216)||(25071-25107)
scaffold0158 (180-216)||(25324-25360)
[»] scaffold0465 (1 HSPs)
scaffold0465 (39-106)||(10182-10249)
[»] scaffold0234 (1 HSPs)
scaffold0234 (39-106)||(17620-17687)
[»] scaffold0589 (1 HSPs)
scaffold0589 (188-238)||(7927-7976)
[»] scaffold0251 (1 HSPs)
scaffold0251 (30-106)||(13602-13680)
[»] scaffold0175 (1 HSPs)
scaffold0175 (30-106)||(14910-14988)
[»] scaffold0004 (1 HSPs)
scaffold0004 (30-106)||(193703-193781)
[»] scaffold0389 (1 HSPs)
scaffold0389 (44-109)||(10639-10704)
[»] scaffold0327 (1 HSPs)
scaffold0327 (44-109)||(5934-5999)
[»] scaffold0092 (1 HSPs)
scaffold0092 (188-237)||(3441-3489)
[»] scaffold0068 (2 HSPs)
scaffold0068 (180-237)||(48260-48316)
scaffold0068 (180-237)||(61708-61764)
[»] scaffold0053 (1 HSPs)
scaffold0053 (40-109)||(77052-77121)
[»] scaffold0011 (2 HSPs)
scaffold0011 (179-216)||(254912-254949)
scaffold0011 (179-216)||(261518-261555)
[»] scaffold1311 (1 HSPs)
scaffold1311 (44-104)||(1652-1712)
[»] scaffold0786 (1 HSPs)
scaffold0786 (44-104)||(1571-1631)
[»] scaffold0740 (1 HSPs)
scaffold0740 (179-207)||(4397-4425)
[»] scaffold0390 (1 HSPs)
scaffold0390 (44-104)||(5159-5219)
[»] scaffold0195 (1 HSPs)
scaffold0195 (178-214)||(618-654)
[»] scaffold0049 (1 HSPs)
scaffold0049 (178-214)||(20283-20319)


Alignment Details
Target: scaffold0035 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 118099 - 118039
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  118099 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 118039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 109598 - 109538
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  109598 agcataattcaccaatttatcatattttcaatatataccaatttctcatactttgaacatg 109538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 9098 - 9158
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9098 agcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 9158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 11287528 - 11287588
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11287528 agcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 11287588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 7284193 - 7284137
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  7284193 ataattcaccaattaagcatattttcaacatataccaacttctcatactttgaacat 7284137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 13377489 - 13377572
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||||| || | | ||||| ||||||||||||||| |||||    
T  13377489 acccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcat 13377572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26070398 - 26070340
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||    
T  26070398 cataattcaccaattaagcatattttcaacatataccattttctcatactttgaacatg 26070340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26094185 - 26094127
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||    
T  26094185 cataattcaccaattaagcatattttcaacatataccattttctcatactttgaacatg 26094127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 3894988 - 3895064
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||| ||||||||||||||||||| |||| || || |||||||| ||||||| | |||||||||||||||||    
T  3894988 cattttcaccaaaccaacaacaacaacttattttacaacaacaaattatgaatcatgcatacccaagccatgaatta 3895064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 3895136 - 3895196
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  3895136 agcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 3895196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 32494342 - 32494258
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||| |||||||||||||||| || ||| ||| || |||||||| ||||||| | || ||||||||||||||||||    
T  32494342 tacccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacacaagccatgaattatcat 32494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 12369975 - 12369916
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  12369975 gcataattcaccaattgagcatattttcaacagatacccatttttcatactttgaacatg 12369916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 15358758 - 15358839
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||  | |   ||||| ||||||||||||||| ||||    
T  15358758 acccatttttacaaacaaacaacaacaacttatttttcatcatcaaatcttgatatatgaacacccaagccatgaatcatca 15358839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 26070552 - 26070468
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||| |||| |||||||||||||| ||| ||| || ||||| || ||||||| | ||||||||||||||| |||||    
T  26070552 tacccattttcaccaaactaacaacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcat 26070468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 26094339 - 26094255
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||| |||| |||||||||||||| ||| ||| || ||||| || ||||||| | ||||||||||||||| |||||    
T  26094339 tacccattttcaccaaactaacaacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcat 26094255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 13863218 - 13863143
Alignment:
Q  27 tacccattttca-caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatg 101  Q
    |||||||||||| |||||||||||||||||||| |||  ||| ||||||| ||| || ||||| ||||||||||||    
T  13863218 tacccattttcatcaaaccaacaacaacaacttatttcacattatcaaatcattgattatgaacacccaagccatg 13863143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 12248257 - 12248196
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| |||||||||||||||||| |  |||||||||||| ||||||    
T  12248257 agcataattcaaccaattgagcatattttcaacatatactattttctcatactttaaacatg 12248196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 13863066 - 13863005
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  13863066 agcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 13863005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 16570142 - 16570081
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||| | ||||||||  |||||||||||||||||||    
T  16570142 agcataattcaaccaattgagcatattttccagatataccattttctcatactttgaacatg 16570081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 16595520 - 16595581
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||| | ||||||||  |||||||||||||||||||    
T  16595520 agcataattcaaccaattgagcatattttccagatataccattttctcatactttgaacatg 16595581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 20583824 - 20583759
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||| ||| |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  20583824 caacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 20583759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 31501150 - 31501215
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| ||| |||||||||||| || | ||||||| ||||||||||||||| ||||    
T  31501150 caacaacaataacttatttctcatcatcaaatcatgactcatgaacacccaagccatgaatcatca 31501215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 34241462 - 34241393
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  |||||||||||||||| || | | ||||| || |||||||||||| ||||    
T  34241462 aaaccaacaacaacaactcatttttcatcatcaaatcatgatttatgaacactcaagccatgaatcatca 34241393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 111560 - 111481
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||| |||||||||||||||| || ||| ||| || |||||| | ||||||| | |||||||||||||||||||||    
T  111560 cattttcaccaaaccaacaacaacaatttatttctcaacaacaaatt-tgaatcatgcatacccaagccatgaattatcat 111481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 11287389 - 11287460
Alignment:
Q  39 caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||| |||||||| ||  ||| ||| || ||||| || ||||||| |||||||||||||||||||||||    
T  11287389 caaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcat 11287460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 15822567 - 15822528
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacca 217  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  15822567 agcataattcaccatttgagcatattttcaacatatacca 15822528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 143750 - 143788
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  143750 agcataattcaccaattgagcatattttcaacacatacc 143788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 4484687 - 4484769
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| ||||  |||||||||| ||| |||||||||||| || | ||||||| |||||||| |||||| ||||    
T  4484687 acccatttttacaaaaccaagcacaacaacttatttctcatcatcaaatcatgattcatgaatacccaagctatgaatcatca 4484769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 12759098 - 12759136
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  12759098 agcataattcaccaattgagcatattttcaacacatacc 12759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 17224212 - 17224142
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||| |||||||||||  ||| |||||| ||||| || ||| ||||| ||||||||||||||| |||||    
T  17224212 aaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcat 17224142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 38424179 - 38424261
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| || ||||||||||||| ||||||| |||||||| || | | ||||| ||||||| ||||||| ||||    
T  38424179 acccatttttacaaaacccacaacaacaacttatttttcaccatcaaatcatgatttatgaacacccaagtcatgaatcatca 38424261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 47289892 - 47289930
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  47289892 agcataattcaccaattgagcatattttcaacacatacc 47289930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 44865342 - 44865379
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  44865342 gcataattcaccaattgagcatattttcaacacatacc 44865379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 48356617 - 48356686
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||   || |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  48356617 aaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 48356686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 45452296 - 45452244
Alignment:
Q  186 tcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||| |||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  45452296 tcacaaattgagcatattttcaacacatacccatttttcatactttgaacatg 45452244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 16732280 - 16732340
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16732280 agcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 16732340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 12837336 - 12837276
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  12837336 agcataattcaccaattgagcatattttcaacatataccaatttctcatactttgaacatg 12837276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 45458991 - 45458931
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||| ||||    
T  45458991 agcataattcaccaattgaacatatctttaacatatacaaacttctcatattttgagcatg 45458931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 52265796 - 52265713
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||| |||||||||||| |||||| |||  ||||||||||| || ||| ||||| ||||||||||||||| ||||    
T  52265796 tacccattttcaccaaaccaacaacatcaacttatttcacatcatcaaatcatgaattatgaacacccaagccatgaatcatca 52265713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 820029 - 819989
Alignment:
Q  15 attttcaacacatacccattttcacaaaccaacaacaacaa 55  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  820029 attttcaacacatacacattttcacaaaccaacaacaacaa 819989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 15044788 - 15044871
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||| ||| |||||||||||| || ||| |||||||||||| || | | ||||| ||||||||||||||| |||||    
T  15044788 acccattttcaccaaagcaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcat 15044871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 15109636 - 15109553
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||| ||| |||||||||||| || ||| |||||||||||| || | | ||||| ||||||||||||||| |||||    
T  15109636 acccattttcaccaaagcaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcat 15109553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 21959599 - 21959544
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttga 233  Q
    ||||||||||||||||||| ||||||||||||| ||||| | || |||||||||||    
T  21959599 agcataattcaccaattgagcatattttcaacacatacccatttttcatactttga 21959544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 30458018 - 30458074
Alignment:
Q  182 taattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||| ||||||||||||| ||||| | ||  |||||||||||||||    
T  30458018 taattcaccaattgagcatattttcaacacatacccattttacatactttgaacatg 30458074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 40905207 - 40905148
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagcca 99  Q
    ||||||||||||||||||| ||| |||||||||||| || | | ||||| ||||||||||    
T  40905207 aaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagcca 40905148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 44056027 - 44056086
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||| |||   | || ||||||||||||||||    
T  44056027 gcataattcaccaattgagcatattttcaacacatattcatttttcatactttgaacatg 44056086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 8872606 - 8872549
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    |||||||||||||||||| ||||||||| ||| ||||| | || |||||||||||||||    
T  8872606 gcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacat 8872549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 53704868 - 53704811
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    |||||||||||||||||| ||||||||| ||| ||||| | || |||||||||||||||    
T  53704868 gcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacat 53704811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 7964985 - 7964916
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  ||| |||||||||||| || | | ||||| || |||||||||||| ||||    
T  7964985 aaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacactcaagccatgaatcatca 7964916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 13809646 - 13809586
Alignment:
Q  178 agcataattcacc-aattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| | |||||| ||||||| ||||||||||||  |||||||||||||||||||    
T  13809646 agcataattcaactaattgagcatattt-caacatataccattttctcatactttgaacatg 13809586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 15851644 - 15851595
Alignment:
Q  27 tacccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaat 75  Q
    |||||||||||||||| |||||||||||||||| |||  |||||||||||    
T  15851644 tacccattttcacaaaaccaacaacaacaacttatttcacatcatcaaat 15851595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 34395369 - 34395406
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  34395369 gcataattcaccaattgagcatattttcaacacatacc 34395406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 38764686 - 38764751
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||| ||| ||||| |||||| || | | ||||| ||||||||||||||| ||||    
T  38764686 caacaacaacaacttatttctcatcttcaaatcatgatttatgaacacccaagccatgaatcatca 38764751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 41256643 - 41256574
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  ||| |||||||||||| || | | ||||| |||||| |||||||| ||||    
T  41256643 aaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatca 41256574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 820051 - 820015
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatac 215  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  820051 gcataattcaccaattgagcatattttcaacacatac 820015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 31628379 - 31628439
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  31628379 agcataattcaccaattaagcatattttcaacatataccaacttctcatactttgaacatg 31628439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 18777257 - 18777317
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||||||||||||||||| ||||| | || ||||||||||||||||    
T  18777257 agcataattcaccaattgaacatattttcaacacatacccatttttcatactttgaacatg 18777317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 18570390 - 18570450
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  18570390 agcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 18570450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 32898902 - 32898961
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  32898902 gcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 32898961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 18777118 - 18777185
Alignment:
Q  39 caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  18777118 caaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 18777185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 25651196 - 25651279
Alignment:
Q  27 tacccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||||| ||||||||||||||||  || |||||||| ||| || | | ||||| ||||||||||||||| ||||    
T  25651196 tacccattttcacaaaaccaacaacaacaacttaattctcatcatccaatcatgatttatgaacacccaagccatgaatcatca 25651279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 15742516 - 15742439
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| |||||| |||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  15742516 ccattttcaccaaaccagcaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 15742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 18629885 - 18629816
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||| ||| |||||||||||| || | | ||||| |||||| |||||||| ||||    
T  18629885 aaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatca 18629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 18432754 - 18432814
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | ||||||||||||||| ||| | || ||||||||| ||||||    
T  18432754 agcataattcaccaattaagcatattttcaacatacacccatttttcatacttttaacatg 18432814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 21411185 - 21411126
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||| | |||| ||||||| ||||||||||||  |||||||||||||||||||    
T  21411185 agcataattcacaatttgagcatattt-caacatataccactttctcatactttgaacatg 21411126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 22441046 - 22441105
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||  ||||| | || ||||||||| ||||||    
T  22441046 gcataattcaccaattgagcatattttcaactcatacccatttttcatacttttaacatg 22441105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 17083465 - 17083383
Alignment:
Q  28 acccattttcacaaac-caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||||  ||||||||||||||  ||| | |||||||||| || | | ||||| ||||||||||||||| ||||    
T  17083465 acccattttcacaaaaacaacaacaacaactcatttctaatcatcaaatcatgatttatgaacacccaagccatgaatcatca 17083383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 16086131 - 16086188
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||| | ||||||||||||| ||||| | || || |||||||||||||    
T  16086131 ataattcaccaattaagcatattttcaacacatacccatttttcgtactttgaacatg 16086188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 16106630 - 16106687
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||| | ||||||||||||| ||||  | || ||||||||||||||||    
T  16106630 ataattcaccaattaagcatattttcaacacatactcatttttcatactttgaacatg 16106687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 18381957 - 18381888
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||| |||||||||||  ||| |||||| ||||| || ||| ||||| ||||||||||||||| ||||    
T  18381957 aaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 18381888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 18432653 - 18432686
Alignment:
Q  77 attaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||| |||||||||||||||||||||||    
T  18432653 attaatcatgcaaacccaagccatgaattatcat 18432686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 33538643 - 33538574
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  ||| |||||||||||| || | | ||||| || |||||||||||| ||||    
T  33538643 aaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacactcaagccatgaatcatca 33538574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 9784200 - 9784140
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9784200 agcataattcaccaattaagcatattttcaacatataccaacttctcatactttgaacatg 9784140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 8538196 - 8538115
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||| |||| | ||||| ||||||||||||||| ||||    
T  8538196 acccatttttacaaaccaacaacaacaacttatttcacatcatcaaatcattatttatgaacacccaagccatgaatcatca 8538115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 8603435 - 8603354
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||| |||| | ||||| ||||||||||||||| ||||    
T  8603435 acccatttttacaaaccaacaacaacaacttatttcacatcatcaaatcattatttatgaacacccaagccatgaatcatca 8603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 21718339 - 21718399
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  21718339 agcataattcaccaattgagcatattttgaacacataccaatttctcatactttgaacatg 21718399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 35054867 - 35054927
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  35054867 agcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 35054927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 35054715 - 35054795
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| ||||||||||||||||||| ||   || || |||||||| ||||||| | |||||||||||||||||    
T  35054715 tacccattttcaccaaaccaacaacaacaacttattccacaacaacaaattatgaatcatgcatacccaagccatgaatta 35054795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 51627798 - 51627740
Alignment:
Q  180 cataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  51627798 cataattcaaccaattgaacatattt-caacatataccattttctcatactttgaacatg 51627740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 21194987 - 21195056
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  ||| |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  21194987 aaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 21195056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 22143637 - 22143566
Alignment:
Q  38 acaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||    ||| |||||||||||| || ||| ||||| ||||||||||||||| ||||    
T  22143637 acaaaccaacaacaacaatcgatttctcatcatcaaatcatgaattatgaatacccaagccatgaatcatca 22143566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 17608889 - 17608970
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||  ||||||||||||||||||   || |||| ||||||| || | | ||||| ||||||||||||||| ||||    
T  17608889 acccattttccaaaaccaacaacaacaactcaattctcataatcaaatcatgatttatgaacacccaagccatgaatcatca 17608970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22403245 - 22403208
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  22403245 gcataattcaccaattgagcatattttcaacacatacc 22403208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 49967764 - 49967821
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||| ||||||||||||| ||||| | || | ||| ||||||||||    
T  49967764 ataattcaccaattgagcatattttcaacacatacccattttttataatttgaacatg 49967821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 21859974 - 21860054
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||| |||||||||||||||| |  ||| ||| || |||||||| ||||||| |||||| ||||||| || |||||    
T  21859974 cattttcaccaaaccaacaacaacaattcatttctcaacaacaaattatgaatcatgcaaacccgagccatgtatcatcat 21860054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 12349839 - 12349766
Alignment:
Q  19 tcaacacatacccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacc 92  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  12349839 tcaacacacacccattttcacaaaccaaaaacaacaacttatttctcatcatcaaattatgaatcatgcaaacc 12349766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 12349675 - 12349615
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  12349675 agcataattcaccaattgagcatattttcaacatataacaacttctcacactttgaacatg 12349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 54424123 - 54424183
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  54424123 agcataattcaccaattgagcatattttcaacatatatcaatttctcatactttgaacatg 54424183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 17938685 - 17938745
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  17938685 agcataattcatcaattaagcatattttcaacatatatcaacttctcatactttgaacatg 17938745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 45581590 - 45581674
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||| |||||||||||||||| || ||| ||| || |||||||| ||||||| | |||||||||||||||||||||    
T  45581590 tacccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcat 45581674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 12489013 - 12488930
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||| ||||||||||||||||||| |||  |||||| |||| || ||| ||||| |||||||||||||||||||||    
T  12489013 acccattttcaccaaaccaacaacaacaacttatttcccatcattaaatcatgaattatgaacacccaagccatgaattatcat 12488930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 14295549 - 14295610
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  14295549 agcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacatg 14295610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 14301176 - 14301237
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  14301176 agcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacatg 14301237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 8631901 - 8631961
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||| || | | |||||||||||||||||||||||||||| ||||||||||||    
T  8631901 agcataattcactaaataagcatattttcaacatataccaacttctcaaactttgaacatg 8631961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 17523025 - 17522965
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||||||||||  || | ||||||||||||||    
T  17523025 agcataattcaccaattgagcatattttcaacatataccattttgttatactttgaacatg 17522965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 50112186 - 50112127
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  50112186 gcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 50112127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 11061142 - 11061084
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaac 235  Q
    ||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||    
T  11061142 agcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaac 11061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 19260972 - 19260915
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  19260972 ataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 19260915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 54038417 - 54038336
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||| |||||||||||||||| || ||| | | || |||||||| ||||||| | |||||||||||||||||||||    
T  54038417 ccattttcaccaaaccaacaacaacaatttatttcttaacaacaaattatgaatcatgcatacccaagccatgaattatcat 54038336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 17100764 - 17100824
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| |  | ||||||||||||||||    
T  17100764 agcataattcaccaattgagcatattttcaacacatacccatgtttcatactttgaacatg 17100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 17101449 - 17101509
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| |  | ||||||||||||||||    
T  17101449 agcataattcaccaattgagcatattttcaacacatacccatgtttcatactttgaacatg 17101509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 28558169 - 28558249
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||| |||| ||||||||||| || ||| ||| || |||||||| ||||||| | |||||||||||||||||||||    
T  28558169 cattttcaccaaacaaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcat 28558249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 38167873 - 38167953
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| ||| ||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  38167873 tacccattttcaccaaaacaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 38167953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 11061294 - 11061211
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||| ||| ||||||||| ||||| |||  ||||||||||| || ||| ||||| ||||||||||||||| ||||    
T  11061294 tacccattttcaccaaatcaacaacaataacttatttcacatcatcaaatcatgaattatgaacacccaagccatgaatcatca 11061211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 6228912 - 6228830
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| ||||||||||||||||  || |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  6228912 acccatttttacaaaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 6228830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 12952924 - 12953006
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| |||||||||||||||  ||| |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  12952924 acccatttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 12953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 23492335 - 23492412
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||| ||| ||||||| | |||||||||||||||||    
T  23492335 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaactatgaatcatgcatacccaagccatgaatta 23492412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 54423975 - 54424055
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||| ||||||||||||||||||| ||| |||| | ||||| || ||||||| | ||||||||||||||| |||||    
T  54423975 ccattttcaccaaaccaacaacaacaacttatttctcat-aacaaatcatgaatcatgcatacccaagccatgaataatcat 54424055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 8631751 - 8631833
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttt-tcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||||||| |||||||||||||  |||| ||||| |||| |  | ||||||| ||||||||||||||||| |||||    
T  8631751 acccattttcacaaac-aacaacaacaactcattttctcatcttcaattcgtgaatcatgcaaacccaagccatgaatgatcat 8631833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 34439478 - 34439419
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| |||||||| |||| ||||| | ||  |||||||||||||||    
T  34439478 gcataattcaccaattgagcatattttaaacacatacccattttacatactttgaacatg 34439419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 3578210 - 3578260
Alignment:
Q  188 accaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||| |||| |||||||||||||||||| |  |||||||||||||||||||    
T  3578210 accagttgagcatattttcaacatatactattttctcatactttgaacatg 3578260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 14815034 - 14814976
Alignment:
Q  45 aacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaa 103  Q
    |||||||||||||| ||| ||||||||||||||| | ||||||| || || ||||||||    
T  14815034 aacaacaacaacttatttctcatcatcaaattatgattcatgaacacgcaggccatgaa 14814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 16996194 - 16996137
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    |||||||||||||||||| ||||||||| ||| ||||| | || |||||||||||||||    
T  16996194 gcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacat 16996137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 35123807 - 35123845
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  35123807 agcataattcaccaattgagcatattttcaacacatacc 35123845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 6154466 - 6154429
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  6154466 gcataattcaccaattgagcatattttcaacacatacc 6154429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 9591028 - 9590959
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  ||| |||||||||||| || ||  ||||| ||||||| ||||||| ||||    
T  9591028 aaaccaacaacaacaactcatttctcatcatcaaatcatgaactatgaacacccaagtcatgaatcatca 9590959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 11329097 - 11329037
Alignment:
Q  178 agcataattcaccaatt-gaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| ||||| || ||||||| ||||||||||||  |||||||||||||||||||    
T  11329097 agcataattcaacaatttgagcatattt-caacatataccactttctcatactttgaacatg 11329037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 33369195 - 33369118
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    ||||||||| ||||| ||||||||||||| || ||| |||||||||||| || | | ||||| ||||||| |||||||    
T  33369195 acccatttttacaaaaccaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagtcatgaat 33369118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 34559872 - 34559941
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||   || ||||||||||||||| | | ||||| || |||||||||||| ||||    
T  34559872 aaaccaacaacaacaactcaattctcatcatcaaattatgatttatgaacactcaagccatgaatcatca 34559941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 39656499 - 39656568
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||| ||| |||||||||||| || ||| |||||  || || |||||||| ||||    
T  39656499 aaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacccctaaaccatgaatcatca 39656568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 53898590 - 53898553
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  53898590 gcataattcaccaattgagcatattttcaacacatacc 53898553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 3576707 - 3576643
Alignment:
Q  45 aacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||  ||| |||||| ||||| || ||| ||||| ||||||||||||||| ||||    
T  3576707 aacaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatca 3576643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 3992521 - 3992589
Alignment:
Q  39 caaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||||||||||||| |||  || || |||| |||| ||||||| | |||||||||||||||||    
T  3992521 caaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaatta 3992589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 14298532 - 14298564
Alignment:
Q  178 agcataattcaccaattgaacatattttcaaca 210  Q
    ||||||||||||||||||| |||||||||||||    
T  14298532 agcataattcaccaattgagcatattttcaaca 14298564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 14304159 - 14304191
Alignment:
Q  178 agcataattcaccaattgaacatattttcaaca 210  Q
    ||||||||||||||||||| |||||||||||||    
T  14304159 agcataattcaccaattgagcatattttcaaca 14304191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 132 - 192
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  132 agcataattcacgaattgagcatattttcaacatataccaatttctcatactttgaacatg 192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 21623 - 21683
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  21623 agcataattcaccaattgagcatattttcaacatataccattttctcatactttgaacatg 21683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 31325 - 31381
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    |||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  31325 ataatttaccaattgagcatattttcaacatataccattttctcatactttgaacat 31381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 31184 - 31254
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||| |||||||||||  ||| ||| || ||| | || ||||||| |||||||||||||||||||||||    
T  31184 aaaccaccaacaacaactcatttctcaacaacaattcatgaatcatgcaaacccaagccatgaattatcat 31254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 33773 - 33833
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||    
T  33773 agcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatg 33833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 112681 - 112621
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  112681 agcataattcactaattgagcatattttcaacatataccaatttctcatactttgaacatg 112621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 20561767 - 20561707
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||    
T  20561767 agcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatg 20561707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 20647965 - 20647905
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||    
T  20647965 agcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatg 20647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 20654041 - 20653981
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  20654041 agcataattcaccaattaagcatattttcaatatataccaatttctcatactttgaacatg 20653981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 20481564 - 20481644
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  20481564 tacccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 20481644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 38635932 - 38635853
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| |||||  |||||||||||||| ||| |||||| |||||||| | ||||||| ||||||||||||||| ||||    
T  38635932 acccatttttacaaa--aacaacaacaacttgtttctcatcaacaaattatgattcatgaacacccaagccatgaatcatca 38635853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 23149754 - 23149823
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  |||||||||||||||| || ||| ||||| || |||||||||||| ||||    
T  23149754 aaaccaacaacaacaactcatttttcatcatcaaatcatgaattatgaatactcaagccatgaatcatca 23149823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 274405 - 274482
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||||||| | ||||| | |||||||||||||||||    
T  274405 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaatta 274482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 641444 - 641367
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||||||| | ||||| | |||||||||||||||||    
T  641444 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaatta 641367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 827250 - 827173
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||||||| | ||||| | |||||||||||||||||    
T  827250 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaatta 827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 23158136 - 23158205
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||| |||||||  |||||||| ||||||| || ||| ||||| ||||||||||||||| ||||    
T  23158136 aaaccaacaagaacaactcatttttcattatcaaatcatgaattatgaacacccaagccatgaatcatca 23158205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 26011467 - 26011536
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||||||||  || |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  26011467 aaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 26011536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 27233341 - 27233272
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||| ||| |||| ||||||| || | | ||||| ||||||||||||||| ||||    
T  27233341 aaaccaacaacaacaacttatttctcattatcaaatcatgatttatgaacacccaagccatgaatcatca 27233272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 16039177 - 16039097
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||| | | ||||||||| |||||    
T  16039177 tacccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatatccaagccataaatta 16039097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 37653888 - 37653853
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaat 75  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37653888 aaaccaacaacaacaacttatttttcatcatcaaat 37653853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 33611340 - 33611258
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| |||||||||||||||| | | |||||||||||| || | | ||||| || |||||||||||| ||||    
T  33611340 acccatttttacaaaaccaacaacaacaacttatatctcatcatcaaatcatgatttatgaacacacaagccatgaatcatca 33611258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 37611779 - 37611817
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  37611779 agcataattcaccaattgagcatattttcaacacatacc 37611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 5854587 - 5854656
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||   || |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  5854587 aaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 5854656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 20481719 - 20481776
Alignment:
Q  181 ataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||| |||||| |||||| ||| | | || ||||||||||||||||    
T  20481719 ataattcaccaattgagcatattatcaacacatatccatttttcatactttgaacatg 20481776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 22981384 - 22981444
Alignment:
Q  178 agcataattcaccaatt-gaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| ||||| || ||||||| ||||||||||||  |||||||||||||||||||    
T  22981384 agcataattcaacaatttgagcatattt-caacatataccactttctcatactttgaacatg 22981444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 25296145 - 25296185
Alignment:
Q  32 attttcacaaa-ccaacaacaacaacttctttttcatcatc 71  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  25296145 attttcacaaaaccaacaacaacaacttatttttcatcatc 25296185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 25758165 - 25758205
Alignment:
Q  32 attttcacaaa-ccaacaacaacaacttctttttcatcatc 71  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  25758165 attttcacaaaaccaacaacaacaacttatttttcatcatc 25758205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 39115234 - 39115318
Alignment:
Q  26 atacccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||| ||||||||| ||||||||| ||||| || ||| ||| ||  ||||||| ||||||| | || |||| |||||||||||||    
T  39115234 atactcattttcaccaaccaacaataacaatttatttctcaacaataaattatgaatcatgcatacacaagtcatgaattatcat 39115318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 248 - 190
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  248 cataattcacgaattaagcatattttcaacatataccaacttctcatactttgaacatg 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 6542 - 6484
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  6542 cataattcacgaattaagcatattttcaacatataccaacttctcatactttgaacatg 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 5054 - 5112
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  5054 cataattcaccaattaagcatattttcaacatataccaacttctcatactgtgaacatg 5112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 1494 - 1551
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  1494 cataattcaacaattgagcatattttcaacatataccaatttctcatactttgaacat 1551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 712 - 652
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||    
T  712 agcataattcaccaaatgagcatattttcaacatataccattttctcatactttgaacatg 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 85443 - 85503
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  85443 agcataattcaccaattaagcatattttcaatatataccaatttctcatactttgaacatg 85503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 253125 - 253069
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaa 234  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  253125 agcatgattcaccaattgagcatattttcaacatataccaatttctcatactttgaa 253069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 23493882 - 23493962
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||| || ||| ||||| ||||||||||||||| |||||    
T  23493882 cattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcat 23493962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 1168339 - 1168280
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  1168339 gcataattcaccaattgagcatattttcaacatatatcattttctcatactttgaacatg 1168280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 20712035 - 20712115
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  20712035 tacccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 20712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 3673822 - 3673905
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||||||  | | | ||||| ||||||||||||||| |||||    
T  3673822 acccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcgtgatttatgaacacccaagccatgaatcatcat 3673905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 11337320 - 11337262
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||| ||| |||||||||||||| |||||  |||||||||||||||||||    
T  11337320 cataattcaccaaatgagcatattttcaacatttaccatattctcatactttgaacatg 11337262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 6456601 - 6456666
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||| ||| |||||||||||| || | ||||||| ||||||||||||||| ||||    
T  6456601 caacaacaacaacttatttctcatcatcaaatcatgattcatgaacacccaagccatgaatcatca 6456666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 20712187 - 20712247
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| |||||| |||||| ||||| | || ||||||||||||||||    
T  20712187 agcataattcaccaattgagcatattatcaacacatacccatttttcatactttgaacatg 20712247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 11584165 - 11584203
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  11584165 agcataattcaccaattgagcatattttcaacatatacc 11584203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 24183268 - 24183230
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  24183268 agcataattcaccaattgagcatattttcaacatatacc 24183230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 5451130 - 5451082
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaat 75  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  5451130 acccattttcaccaaaccaacaacaacaacttatttctcatcatcaaat 5451082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 1168491 - 1168408
Alignment:
Q  28 acccattttca-caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||| |||| || |||||||| ||  ||| ||| || ||||| || ||||||| |||||||||||||||||||||||    
T  1168491 acccattttcatcaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcat 1168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 19405662 - 19405709
Alignment:
Q  191 aattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||| |||||||||||||||||||   |||||||||||||||||||    
T  19405662 aattgagcatattttcaacatatacccttttctcatactttgaacatg 19405709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 432423 - 432505
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||| ||||||| |||| ||||||||||| ||| |||| ||||||| || ||| ||||| |||||||||| |||| ||||    
T  432423 acccattctcacaaaaccaataacaacaacttatttctcatgatcaaatcataaattatgaatacccaagccaggaatcatca 432505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 16595621 - 16595678
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||| | |||| ||||||| ||||||||||||  |||||||||||||||||||    
T  16595621 cataattcacaatttgagcatattt-caacatataccactttctcatactttgaacatg 16595678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 21204887 - 21204965
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||| |||| ||||||| | |||||||||||||||||    
T  21204887 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaatta 21204965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 21397204 - 21397241
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  21397204 gcataattcaccaattgagcatattttcaacacatacc 21397241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 21650657 - 21650734
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  |  || |||||||| ||||||| | |||||| ||||||||||    
T  21650657 ccattttcaccaaaccaacaacaacaacttatttcaccacaacaaattatgaatcatgcatacccaaaccatgaatta 21650734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 19862183 - 19862251
Alignment:
Q  41 aaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||| |||||||||||  ||| |||||||||||| || ||| ||||| ||||||| ||||||| ||||    
T  19862183 aaccaccaacaacaactcatttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatca 19862251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 25602135 - 25602195
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  25602135 agcataactcaccaattgagcatattttcaacatatatcaatttctcatactttgaacatg 25602195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 27261915 - 27261974
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  27261915 agcataattcaccaat-gagcatattttcaacatataccaatttctcatactttgaacatg 27261974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 67951 - 68029
Alignment:
Q  27 tacccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||||| || ||| ||||| || ||||||||||||    
T  67951 tacccattttcacaaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacgcaagccatgaat 68029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 28974160 - 28974220
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||| |||| ||| ||||||||||||||||||||  |||||||||||||||||||    
T  28974160 agcataattcgccaaatgagcatattttcaacatataccattttctcatactttgaacatg 28974220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 36890821 - 36890761
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | |||||||||||||||| |||  |||||||||||||||||||    
T  36890821 agcataattcaccaattaagcatattttcaacatattccattttctcatactttgaacatg 36890761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 23821893 - 23821810
Alignment:
Q  27 tacccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||||| |||||||||||||||| |||  ||||||||||| || ||| ||||| ||||| ||||||||| ||||    
T  23821893 tacccattttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatca 23821810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 23830972 - 23830889
Alignment:
Q  27 tacccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||||| |||||||||||||||| |||  ||||||||||| || ||| ||||| ||||| ||||||||| ||||    
T  23830972 tacccattttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatca 23830889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 36890973 - 36890889
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| || ||||| |  ||||||| | ||||||||||||||| |||||    
T  36890973 tacccattttcaccaaaccaacaacaacaacttatttctcaacaacaaatcaagaatcatgcatacccaagccatgaataatcat 36890889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 28974029 - 28974092
Alignment:
Q  47 caacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||| ||  ||| |||||| ||||| || ||||||| |||||||||||||||||||||||    
T  28974029 caacaacatctcatttctcatcaacaaatcatgaatcatgcaaacccaagccatgaattatcat 28974092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 271283 - 271341
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| ||||||||||||| ||||| | |||  | ||||||||||||    
T  271283 cataattcaccaattgagcatattttcaacacatacccatttcatacactttgaacatg 271341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 9653189 - 9653112
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||| ||||||||||||||||||| |||  || || |||| |||| ||||||| | |||||||||||||||||    
T  9653189 cattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaatta 9653112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 19433606 - 19433537
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||| |||||||||||  ||| |||||| ||||| || ||| ||||| ||||||||||||||| ||||    
T  19433606 aaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatca 19433537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 19669379 - 19669314
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||  |||||||||||||  | || ||| ||||| ||||||||||||||| ||||    
T  19669379 caacaacaacaactcatttttcatcatcagttcatgaattatgaatacccaagccatgaatcatca 19669314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 23774100 - 23774145
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaa 73  Q
    ||||||||||||||| ||||||||||| ||  ||||||||||||||    
T  23774100 acccattttcacaaaacaacaacaacatctcatttttcatcatcaa 23774145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 4448269 - 4448237
Alignment:
Q  178 agcataattcaccaattgaacatattttcaaca 210  Q
    ||||| |||||||||||||||||||||||||||    
T  4448269 agcatcattcaccaattgaacatattttcaaca 4448237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 70757 - 70698
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||    
T  70757 gcataattcaccaattgagcatattttcaacacatacctacttttcatactttgaacatg 70698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 60917 - 60977
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| |  ||||||| |||| ||||| | || ||||||||||||||||    
T  60917 agcataattcaccaattaagtatatttttaacacatacccatttttcatactttgaacatg 60977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 19197 - 19113
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||| |||||||| |||||||||||||||| || ||| ||| || |||||||| ||||||| | |||||||||||||||||||||    
T  19197 tacctattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcat 19113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 12803 - 12732
Alignment:
Q  39 caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||||||| || ||| ||| || |||||||| ||||||| | |||||||||||||||||||||    
T  12803 caaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcat 12732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 146712 - 146772
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  146712 agcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 146772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 146560 - 146640
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| ||||||||||||||||||| |||  ||  | |||||||| ||||||| | |||||||||||||||||    
T  146560 tacccattttcaccaaaccaacaacaacaacttatttcacaaaaacaaattatgaatcatgcatacccaagccatgaatta 146640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 88386 - 88446
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  88386 agcataattcaccaattgatcatattttcaacacatacccatttttcatactttgaacatg 88446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 132385 - 132327
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    |||||||||||||||||| ||||||||||||| ||||| | || |||||||||||||||    
T  132385 gcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacat 132327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 2603 - 2520
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||||  || ||| |||||  |||||||||||||| |||||    
T  2603 acccattttcaccaaaccaacaacaacaacttatttctcatcatcaaaacatgaattatgaacgcccaagccatgaatcatcat 2520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 7681 - 7740
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| |||||||||| |||||||| | || ||||||||||||||||    
T  7681 gcataattcaccaattgagcatattttcatcatatacccatttttcatactttgaacatg 7740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 46124 - 46207
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||| ||||||||||||||||||| |||  ||| ||||||| || ||| ||||| ||||||||||||||| ||||    
T  46124 tacccattttcaccaaaccaacaacaacaacttatttcacattatcaaatcatgaattatgaacacccaagccatgaatcatca 46207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 79841 - 79907
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||||||    
T  79841 caacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattatcat 79907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 40616 - 40700
Alignment:
Q  26 atacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||||| ||||||||||||||| ||| |||   || ||||||| || ||| ||||| ||||||||||||||| ||||    
T  40616 atacccattttcaccaaaccaacaacaacagcttatttcaaattatcaaatcatgaattatgaacacccaagccatgaatcatca 40700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 22803 - 22862
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  22803 gcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 22862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 2419 - 2497
Alignment:
Q  32 attttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||| |  ||| ||||| ||||||||||||||| ||||    
T  2419 attttcacaaaaccaacaacaacaacttatttctcatcatcaaataaggaattatgaatacccaagccatgaatcatca 2497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 90131 - 90049
Alignment:
Q  28 acccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||||| || | | ||||| ||||||| ||||||| ||||    
T  90131 acccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagtcatgaatcatca 90049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 9800 - 9723
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  9800 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 9723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 11054 - 11131
Alignment:
Q  27 tacccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||||||| || |   ||||| ||| |||||||||||    
T  11054 tacccatttttacaaaccaacaacaacaacttatttctcatcatcaaatcatgatctatgaacacctaagccatgaat 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 4566 - 4647
Alignment:
Q  28 acccattttcacaaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||  | |   ||||| ||||||||||||||| ||||    
T  4566 acccatttttacaaacaaacaacaacaacttatttttcatcatcaaatcttgatatatgaacacccaagccatgaatcatca 4647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 11704 - 11644
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | ||||||||||||| ||||| | || ||||||||||||||||    
T  11704 agcataattcaccaattaagcatattttcaacacatacccatttttcatactttgaacatg 11644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 15762 - 15682
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||| |||||||||||||||| || ||| ||| ||  ||||||| ||||||| | |||||||||||||||||    
T  15762 tacccattttcaccaaaccaacaacaacaatttatttctcaacaaaaaattatgaatcatgcatacccaagccatgaatta 15682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 6504 - 6586
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||| ||||| |||||||||||||||| ||| |||||||||||| || | | ||||| ||| ||||||||||| ||||    
T  6504 acccatttttacaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacctaagccatgaatcatca 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 24864 - 24804
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||||| ||||| ||||||| ||||| | || ||||||||||||||||    
T  24864 agcataattcaccaattgagcatatgttcaacacatacccatttttcatactttgaacatg 24804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 25012 - 24936
Alignment:
Q  31 cattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||||| |||||||||| ||||||    
T  25012 cattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgaatacccaagccaagaatta 24936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 94937 - 95014
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||| | |||||| ||||||||||    
T  94937 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaaaccatgaatta 95014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 957 - 898
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||  ||||| | || ||||||||||||||||    
T  957 gcataattcaccaattgagcatattttcaactcatacccatttttcatactttgaacatg 898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 4522 - 4605
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||| |||||||| ||||||||||||||||||| |||  ||||||||||| ||  || ||||| ||||||||||||||| ||||    
T  4522 taccaattttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacacccaagccatgaatcatca 4605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 9136 - 9219
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||| |||||||| ||||||||||||||||||| |||  ||||||||||| ||  || ||||| ||||||||||||||| ||||    
T  9136 taccaattttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacacccaagccatgaatcatca 9219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 4674 - 4735
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  4674 agcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 4735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 9288 - 9349
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  9288 agcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 9349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 11843 - 11784
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||||||||||||||| ||||||||||||  ||||| | || ||||||||||||||||    
T  11843 gcataattcaccaattgagcatattttcaactaatacccatttttcatactttgaacatg 11784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 7130 - 7213
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||| |||||||| ||||||||||||||||||| |||  ||||||||||| ||  || ||||| ||||||||||||||| ||||    
T  7130 taccaattttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacacccaagccatgaatcatca 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 7283 - 7344
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| ||||||||||||| ||||| | || ||||||||||||||||    
T  7283 agcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 7344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 5899 - 5982
Alignment:
Q  27 tacccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||| ||||||||||||||||||| |||  ||||||||||| ||  || ||||| || |||||||||||| ||||    
T  5899 tacccattttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacactcaagccatgaatcatca 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 6062 - 6113
Alignment:
Q  188 accaattgaacatattttcaacatatacca-acttctcatactttgaacatg 238  Q
    ||||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  6062 accaattgagcatattttcaacatataccatttttctcatactttgaacatg 6113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 38410 - 38469
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||| |||||||| ||||||||||||||||||| | ||||| | |||||||||||    
T  38410 gcataattcgccaattgagcatattttcaacatatacccatttctcttcctttgaacatg 38469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 255 - 293
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  255 agcataattcaccaattgagcatattttcaacatatacc 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 118 - 187
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatcat 110  Q
    ||||||||||||||||||  ||| ||| || ||| | || ||||||| |||||||||||||||||||||||    
T  118 aaaccaacaacaacaactcatttctcagcaacaa-tcatgaatcatgcaaacccaagccatgaattatcat 187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 1272 - 1194
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| ||| ||| || |||| |||| ||||||| | |||||||||||||||||    
T  1272 ccattttcaccaaaccaacaacaacaacttatttctcaacaacaaaattatgaatcatgcatacccaagccatgaatta 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 10048 - 10086
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  10048 agcataattcaccaattgagcatattttcaacatatacc 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 55542 - 55620
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||| || || |||| |||| ||||||| | |||||||||||||||||    
T  55542 ccattttcaccaaaccaacaacaacaacttattttacaacaacaaaattatgaatcatgcatacccaagccatgaatta 55620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 104892 - 104827
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||  ||| |||||||||| | || ||| ||||| ||||||||||||||| ||||    
T  104892 caacaacaacaactcatttatcatcatcaattcatgaattatgaatacccaagccatgaatcatca 104827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 2026 - 2087
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||||| |||||||||| |||||||||  ||| |||||||||||||||    
T  2026 agcataattcaaccaattgagcatattttcatcatataccattttcgcatactttgaacatg 2087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 1216 - 1151
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||| ||| |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  1216 caacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 7362 - 7439
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    ||||||||| ||||| |||||||||||||||| ||| |||||||||||| || | | ||||  |||||||||||||||    
T  7362 acccatttttacaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgagtacccaagccatgaat 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 16787 - 16864
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    ||||||||| ||||| |||||||||||||||| ||| |||||||||||| || | | ||||  |||||||||||||||    
T  16787 acccatttttacaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgagtacccaagccatgaat 16864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 22797 - 22720
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||||||| ||||||| | |||||| ||||||||||    
T  22797 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaaaccatgaatta 22720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 44072 - 44003
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||||||  ||| |||||||||||| || | | ||||| ||||||||||||||| ||||    
T  44072 aaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatca 44003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 23959 - 23908
Alignment:
Q  28 acccattttcacaaa-ccaacaacaacaacttctttttcatcatcaaattat 78  Q
    ||||||||| ||||| ||||||||||||| || |||||||||||||||||||    
T  23959 acccatttttacaaaaccaacaacaacaatttatttttcatcatcaaattat 23908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 70724 - 70785
Alignment:
Q  178 agcataattca-ccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||| |||||| | |||||||||||||||| |||  |||||||||||||||||||    
T  70724 agcataattcaaccaattaagcatattttcaacatattccattttctcatactttgaacatg 70785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 31168 - 31215
Alignment:
Q  191 aattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||||||    
T  31168 aattgagcatattttcaacatataccattttcttatactttgaacatg 31215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 6823 - 6759
Alignment:
Q  42 accaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  6823 accaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 6759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 1428 - 1488
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||||||||||| | |||||||||| || ||||| | || ||||||||||||||||    
T  1428 agcataattcaccaattaagcatattttcatcacatacccatttttcatactttgaacatg 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 25071 - 25107
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25071 cataattcaccaattgagcatattttcaacatatacc 25107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 25324 - 25360
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatatacc 216  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25324 cataattcaccaattgagcatattttcaacatatacc 25360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 10249 - 10182
Alignment:
Q  39 caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    ||||||| |||||||||||| |||  || || |||||||| ||||||| | |||||||||||||||||    
T  10249 caaaccatcaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaatta 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 17687 - 17620
Alignment:
Q  39 caaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||||||||||||| |||  || || || ||||| ||||||| | |||||||||||||||||    
T  17687 caaaccaacaacaacaacttatttcacaacaacatattatgaatcatgcatacccaagccatgaatta 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 7927 - 7976
Alignment:
Q  188 accaattgaacatattttcaacatataccaacttctcatactttgaacatg 238  Q
    ||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  7927 accaattgagcatattttca-catataccactttctcatactttgaacatg 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 13680 - 13602
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||| |||| ||||||| | |||||||||||||||||    
T  13680 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaatta 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 14910 - 14988
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||| |||| ||||||| | |||||||||||||||||    
T  14910 ccattttcaccaaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaatta 14988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 193781 - 193703
Alignment:
Q  30 ccattttcac-aaaccaacaacaacaacttctttttcatcatcaaa-ttattaatcatgaaaacccaagccatgaatta 106  Q
    |||||||||| ||||||||||||||||||| |||  || || |||| |||| ||||||| | |||||||||||||||||    
T  193781 ccattttcacgaaaccaacaacaacaacttatttcgcaacaacaaaattatgaatcatgcatacccaagccatgaatta 193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 10639 - 10704
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||||||||| |  |||||||||||||| | || ||| ||||| ||||||||||||||| ||||    
T  10639 caacaacaacaattcatttttcatcatcaattcatgaattatgaacacccaagccatgaatgatca 10704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 5934 - 5999
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    ||||||||||||||  |||||||||  ||||| || ||| ||||| ||||||||||||||| ||||    
T  5934 caacaacaacaactcatttttcatcgccaaatcatgaattatgaatacccaagccatgaatcatca 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 3441 - 3489
Alignment:
Q  188 accaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    ||||||||| |||||||||| |||||||||  ||||||||||||||||||    
T  3441 accaattgagcatattttca-catataccactttctcatactttgaacat 3489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 48260 - 48316
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    ||||||||||||||||| |||||||| |||| ||||| | || |||||||||||||||    
T  48260 cataattcaccaattgagcatatttt-aacacatacccatttttcatactttgaacat 48316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 61708 - 61764
Alignment:
Q  180 cataattcaccaattgaacatattttcaacatataccaacttctcatactttgaacat 237  Q
    ||||||||||||||||| |||||||| |||| ||||| | || |||||||||||||||    
T  61708 cataattcaccaattgagcatatttt-aacacatacccatttttcatactttgaacat 61764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 77121 - 77052
Alignment:
Q  40 aaaccaacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaattatca 109  Q
    |||||| |||||||||||  ||| |||||| ||||| || ||| ||||| ||||||||||||||| ||||    
T  77121 aaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 77052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 254949 - 254912
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  254949 gcataattcaccaattgagcatattttcaacacatacc 254912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 261555 - 261518
Alignment:
Q  179 gcataattcaccaattgaacatattttcaacatatacc 216  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  261555 gcataattcaccaattgagcatattttcaacacatacc 261518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 1652 - 1712
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    ||||||||||| ||  ||| |||||||||||| || ||| ||||| |||||||||||||||    
T  1652 caacaacaacatctcatttctcatcatcaaatcatgaattatgaatacccaagccatgaat 1712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 1571 - 1631
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    ||||||||||||||  ||| |||||||||| | || ||| ||||| |||||||||||||||    
T  1571 caacaacaacaactcatttatcatcatcaattcatgaattatgaatacccaagccatgaat 1631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 4397 - 4425
Alignment:
Q  179 gcataattcaccaattgaacatattttca 207  Q
    |||||||||||||||||||||||||||||    
T  4397 gcataattcaccaattgaacatattttca 4425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 5159 - 5219
Alignment:
Q  44 caacaacaacaacttctttttcatcatcaaattattaatcatgaaaacccaagccatgaat 104  Q
    ||||||||||||||  ||| |||||||||| | || ||| ||||| |||||||||||||||    
T  5159 caacaacaacaactcatttatcatcatcaattcatgaattatgaatacccaagccatgaat 5219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 654 - 618
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatata 214  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  654 agcataattcaccaaatgagcatattttcaacatata 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 20283 - 20319
Alignment:
Q  178 agcataattcaccaattgaacatattttcaacatata 214  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  20283 agcataattaaccaattgagcatattttcaacatata 20319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University