View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8861_low_29 (Length: 217)

Name: NF8861_low_29
Description: NF8861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8861_low_29
NF8861_low_29
[»] chr6 (31 HSPs)
chr6 (8-98)||(27629956-27630046)
chr6 (2-98)||(27272830-27272926)
chr6 (13-80)||(4525153-4525220)
chr6 (16-92)||(28162527-28162603)
chr6 (13-80)||(29501270-29501337)
chr6 (13-63)||(27007576-27007626)
chr6 (159-204)||(27629853-27629898)
chr6 (10-63)||(30558298-30558351)
chr6 (16-92)||(13522323-13522399)
chr6 (16-92)||(33374506-33374582)
chr6 (13-80)||(27044254-27044321)
chr6 (13-63)||(4546066-4546116)
chr6 (13-63)||(4724425-4724475)
chr6 (13-63)||(17025126-17025176)
chr6 (13-63)||(26777909-26777959)
chr6 (13-63)||(28207306-28207356)
chr6 (13-62)||(16944310-16944359)
chr6 (16-97)||(22477521-22477602)
chr6 (13-62)||(27484981-27485030)
chr6 (13-62)||(29572877-29572926)
chr6 (13-50)||(34463656-34463693)
chr6 (16-92)||(8892560-8892636)
chr6 (16-80)||(29549345-29549409)
chr6 (13-63)||(4757625-4757675)
chr6 (13-63)||(4772861-4772911)
chr6 (16-50)||(16673994-16674028)
chr6 (13-63)||(26116701-26116751)
chr6 (13-63)||(27360292-27360342)
chr6 (13-63)||(27450635-27450685)
chr6 (13-50)||(3695927-3695964)
chr6 (16-92)||(8903795-8903871)
[»] scaffold0336 (1 HSPs)
scaffold0336 (13-80)||(8099-8166)
[»] chr4 (17 HSPs)
chr4 (16-93)||(15227758-15227835)
chr4 (4-92)||(1900133-1900221)
chr4 (10-63)||(14098420-14098473)
chr4 (10-63)||(31126857-31126910)
chr4 (4-80)||(24112538-24112614)
chr4 (4-80)||(34189279-34189355)
chr4 (13-62)||(40105978-40106027)
chr4 (16-80)||(14763626-14763690)
chr4 (16-92)||(24460912-24460988)
chr4 (16-80)||(36344834-36344898)
chr4 (16-63)||(19373146-19373193)
chr4 (16-50)||(39850508-39850542)
chr4 (16-97)||(54833275-54833356)
chr4 (13-97)||(5005752-5005836)
chr4 (13-97)||(6569735-6569819)
chr4 (4-92)||(14664891-14664979)
chr4 (13-97)||(21969583-21969667)
[»] chr8 (13 HSPs)
chr8 (16-92)||(44562974-44563050)
chr8 (10-97)||(31490014-31490101)
chr8 (13-63)||(3329817-3329867)
chr8 (16-92)||(9354495-9354571)
chr8 (16-92)||(18710456-18710532)
chr8 (16-92)||(19659305-19659381)
chr8 (13-80)||(31354391-31354458)
chr8 (13-63)||(12093031-12093081)
chr8 (13-63)||(29829180-29829230)
chr8 (13-62)||(19208659-19208708)
chr8 (13-62)||(28362254-28362303)
chr8 (13-62)||(33258590-33258639)
chr8 (16-97)||(19286335-19286416)
[»] chr2 (28 HSPs)
chr2 (4-92)||(21703460-21703548)
chr2 (16-92)||(31891624-31891700)
chr2 (10-63)||(16829666-16829719)
chr2 (10-63)||(16891762-16891815)
chr2 (16-92)||(3784523-3784599)
chr2 (16-92)||(27118557-27118633)
chr2 (13-97)||(27777070-27777154)
chr2 (13-97)||(27816837-27816921)
chr2 (16-92)||(34156880-34156956)
chr2 (13-97)||(37925356-37925440)
chr2 (16-91)||(34303600-34303675)
chr2 (13-63)||(39889925-39889975)
chr2 (13-50)||(9350335-9350372)
chr2 (13-50)||(12586664-12586701)
chr2 (13-62)||(19416828-19416877)
chr2 (13-62)||(22926357-22926406)
chr2 (13-50)||(27803555-27803592)
chr2 (13-62)||(31876144-31876193)
chr2 (13-62)||(34861543-34861592)
chr2 (13-62)||(37686238-37686287)
chr2 (13-62)||(37701503-37701552)
chr2 (13-97)||(261059-261143)
chr2 (16-92)||(16163468-16163544)
chr2 (16-50)||(39052169-39052203)
chr2 (16-50)||(40233365-40233399)
chr2 (13-97)||(11635483-11635567)
chr2 (13-97)||(11641672-11641756)
chr2 (16-80)||(37375027-37375091)
[»] chr5 (39 HSPs)
chr5 (10-97)||(30168342-30168429)
chr5 (10-63)||(18375648-18375701)
chr5 (10-63)||(33516229-33516282)
chr5 (16-92)||(11325676-11325752)
chr5 (16-92)||(13184852-13184928)
chr5 (16-92)||(13440698-13440774)
chr5 (4-92)||(22888340-22888428)
chr5 (13-97)||(31431304-31431388)
chr5 (4-80)||(33292395-33292471)
chr5 (16-92)||(33877129-33877205)
chr5 (13-80)||(32599688-32599755)
chr5 (13-63)||(6874178-6874228)
chr5 (13-63)||(28960034-28960084)
chr5 (13-63)||(34616397-34616447)
chr5 (13-63)||(37358891-37358941)
chr5 (13-63)||(37671728-37671778)
chr5 (13-62)||(2510927-2510976)
chr5 (16-97)||(3789405-3789486)
chr5 (13-62)||(5637786-5637835)
chr5 (13-62)||(9317327-9317376)
chr5 (13-62)||(12132031-12132080)
chr5 (13-62)||(15759094-15759143)
chr5 (13-62)||(26480268-26480317)
chr5 (13-62)||(29967303-29967352)
chr5 (13-62)||(30029291-30029340)
chr5 (13-62)||(30151894-30151943)
chr5 (13-62)||(31826656-31826705)
chr5 (13-62)||(37754844-37754893)
chr5 (13-62)||(37771236-37771285)
chr5 (13-97)||(18500950-18501034)
chr5 (16-92)||(23892085-23892161)
chr5 (13-97)||(43078125-43078209)
chr5 (13-63)||(13325080-13325130)
chr5 (16-82)||(25198911-25198977)
chr5 (16-50)||(40473801-40473835)
chr5 (4-97)||(24969891-24969984)
chr5 (13-97)||(9548745-9548829)
chr5 (13-97)||(15658962-15659046)
chr5 (17-97)||(41674589-41674669)
[»] chr3 (38 HSPs)
chr3 (13-80)||(5596729-5596796)
chr3 (10-63)||(17985336-17985389)
chr3 (4-80)||(4893032-4893108)
chr3 (16-92)||(17994132-17994208)
chr3 (10-62)||(18225016-18225068)
chr3 (4-80)||(22387938-22388014)
chr3 (13-97)||(22871220-22871304)
chr3 (13-97)||(22886279-22886363)
chr3 (4-80)||(32438976-32439052)
chr3 (13-97)||(36997435-36997519)
chr3 (13-97)||(47023281-47023365)
chr3 (13-80)||(4347047-4347114)
chr3 (16-91)||(4625778-4625853)
chr3 (13-80)||(28021106-28021173)
chr3 (13-92)||(29149106-29149185)
chr3 (13-63)||(6542854-6542904)
chr3 (13-62)||(5013540-5013589)
chr3 (13-62)||(5609703-5609752)
chr3 (13-50)||(20577255-20577292)
chr3 (13-62)||(24327987-24328036)
chr3 (13-62)||(28339130-28339179)
chr3 (16-97)||(29665331-29665412)
chr3 (13-62)||(31964854-31964903)
chr3 (13-62)||(50134452-50134501)
chr3 (16-80)||(8211572-8211636)
chr3 (13-97)||(11110707-11110791)
chr3 (4-92)||(16626854-16626942)
chr3 (16-80)||(18277415-18277479)
chr3 (16-80)||(18292716-18292780)
chr3 (16-80)||(18308017-18308081)
chr3 (13-80)||(5466813-5466880)
chr3 (13-63)||(4416744-4416794)
chr3 (16-50)||(48465746-48465780)
chr3 (16-50)||(51781842-51781876)
chr3 (16-50)||(51796931-51796965)
chr3 (13-50)||(18242555-18242592)
chr3 (16-92)||(5652221-5652297)
chr3 (13-97)||(28116303-28116387)
[»] scaffold2173 (2 HSPs)
scaffold2173 (159-204)||(90-135)
scaffold2173 (67-98)||(1-32)
[»] scaffold0237 (1 HSPs)
scaffold0237 (10-63)||(15269-15322)
[»] scaffold0260 (1 HSPs)
scaffold0260 (16-92)||(2965-3041)
[»] scaffold0124 (1 HSPs)
scaffold0124 (4-92)||(20270-20358)
[»] chr7 (20 HSPs)
chr7 (4-80)||(5159381-5159457)
chr7 (16-84)||(16450199-16450267)
chr7 (16-92)||(31088657-31088733)
chr7 (16-92)||(45733334-45733410)
chr7 (13-80)||(4145331-4145398)
chr7 (4-86)||(16041185-16041267)
chr7 (16-97)||(5147531-5147612)
chr7 (13-62)||(9618519-9618568)
chr7 (13-62)||(24592767-24592816)
chr7 (13-62)||(26275320-26275369)
chr7 (13-62)||(26320095-26320144)
chr7 (16-97)||(26435128-26435209)
chr7 (13-62)||(26670140-26670189)
chr7 (13-97)||(11441428-11441512)
chr7 (13-61)||(31124779-31124827)
chr7 (16-50)||(3445165-3445199)
chr7 (16-50)||(26485982-26486016)
chr7 (16-50)||(26538111-26538145)
chr7 (13-63)||(31564624-31564674)
chr7 (13-97)||(5127860-5127944)
[»] chr1 (5 HSPs)
chr1 (16-92)||(20340642-20340718)
chr1 (13-63)||(51638084-51638134)
chr1 (13-62)||(10962536-10962585)
chr1 (13-62)||(28584847-28584896)
chr1 (16-92)||(20460977-20461053)
[»] scaffold0038 (1 HSPs)
scaffold0038 (13-63)||(7804-7854)
[»] scaffold0496 (1 HSPs)
scaffold0496 (13-62)||(73-122)
[»] scaffold0350 (1 HSPs)
scaffold0350 (13-62)||(7579-7628)
[»] scaffold0159 (2 HSPs)
scaffold0159 (13-62)||(9406-9455)
scaffold0159 (13-62)||(19882-19931)
[»] scaffold0144 (1 HSPs)
scaffold0144 (13-50)||(26554-26591)


Alignment Details
Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 27630046 - 27629956
Alignment:
Q  8 caccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27630046 caccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 27629956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 27272926 - 27272830
Alignment:
Q  2 cctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 98  Q
    |||||| ||| |||||||| |||||||||| ||| || |||||| || | |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  27272926 cctatgtaccgtattctcaacatccattctacccgccattttactattagtatcctttgccatcaggaccacctcaagtacctgtgaatgctattgt 27272830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 4525153 - 4525220
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| | |||||||||    
T  4525153 tattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 4525220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 28162527 - 28162603
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  28162527 tctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaacctcaggtacccgttaatgc 28162603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 29501270 - 29501337
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  29501270 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 29501337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 27007576 - 27007626
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  27007576 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgcca 27007626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 27629898 - 27629853
Alignment:
Q  159 ttttgctaggcctacttttcctccaatcccggttttgtatgctgat 204  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  27629898 ttttgctaggcctacttttcctccaatcccgatgttgtatgctgat 27629853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 30558351 - 30558298
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  30558351 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 30558298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 13522399 - 13522323
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  13522399 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 13522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 33374582 - 33374506
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  33374582 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 33374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 27044254 - 27044321
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  27044254 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 27044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 4546116 - 4546066
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  4546116 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 4546066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 4724475 - 4724425
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  4724475 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 4724425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 17025126 - 17025176
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  17025126 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 17025176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 26777959 - 26777909
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  26777959 tattctcagcatcctttcttcccaccgttttatcatcagtaccctttgcca 26777909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 28207306 - 28207356
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  28207306 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 28207356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 16944359 - 16944310
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  16944359 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 16944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 22477602 - 22477521
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||| ||||| || || ||| | |||||||||||||| || | ||||||||||||||| ||||| ||||    
T  22477602 tctcagcatcccttctttccaccattctatcattagtatcctttgccatcgggtcaacctcaggtacccgttaatgcaattg 22477521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 27484981 - 27485030
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  27484981 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 27485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 29572877 - 29572926
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  29572877 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29572926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 34463693 - 34463656
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34463693 tattctcagcatcctttcttcccaccgttttaccatca 34463656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 8892636 - 8892560
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||||||||||||||| |||||    
T  8892636 tctcagcatcccttctttccaccattatatcatcagtattctttgccatcgggtcaacctcaggtacccgttaatgc 8892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 29549345 - 29549409
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  29549345 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 29549409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 4757625 - 4757675
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  4757625 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 4757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 4772861 - 4772911
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  4772861 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 4772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 16673994 - 16674028
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  16673994 tctcagcatccgttcttcccaccgttttaccatca 16674028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 26116751 - 26116701
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||| | ||||||||||||||||| ||||| || |||||||||    
T  26116751 tattctcagcattcgttcttcccaccgttttatcatcagtaccctttgcca 26116701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 27360342 - 27360292
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  27360342 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27360292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 27450685 - 27450635
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  27450685 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27450635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 3695927 - 3695964
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3695927 tattctcagcatcctttcttcccaccgttttatcatca 3695964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 8903871 - 8903795
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||  ||||| ||||| || || ||||| ||| |||||||||| || | ||||||||||||||| |||||    
T  8903871 tctcagcatctcttctttccaccattctatcatcagtattctttgccatcgggtcaacctcaggtacccgttaatgc 8903795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 8099 - 8166
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| | |||||||||    
T  8099 tattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 8166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 15227758 - 15227835
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgct 93  Q
    ||||||||||| ||||| ||||| || || |||||||||||||||||||| || | ||||||||||||||| ||||||    
T  15227758 tctcagcatcccttctttccaccattctatcatcaatatcctttgccatcgggtcaacctcaggtacccgttaatgct 15227835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 1900133 - 1900221
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  1900133 tatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 1900221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 14098420 - 14098473
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  14098420 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 14098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 31126910 - 31126857
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  31126910 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 31126857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 24112538 - 24112614
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  24112538 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 24112614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 34189355 - 34189279
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  34189355 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 34189279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 40106027 - 40105978
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  40106027 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 40105978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14763690 - 14763626
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  14763690 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 14763626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 24460988 - 24460912
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||||||||||||||| |||||    
T  24460988 tctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaacctcaggtacccgttaatgc 24460912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36344898 - 36344834
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||| ||||||||| ||||| |||||||||||| | || | |||||||||    
T  36344898 tctcagcatccgttcttcctaccgttttatcatcagtatcctttgccaccgggccaacctcaggt 36344834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 19373146 - 19373193
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  19373146 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 19373193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 39850508 - 39850542
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  39850508 tctcagcatccgttcttcccaccgttttaccatca 39850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 54833275 - 54833356
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||| ||| | || | ||||||||| || || ||||| ||||    
T  54833275 tctcagcatccgttcttcccaccgttttatcatcagtaccctttaccaccgggccaacctcaggttcctgtcaatgccattg 54833356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 5005752 - 5005836
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5005752 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5005836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 6569735 - 6569819
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  6569735 tattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattg 6569819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 14664891 - 14664979
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    |||||||| |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  14664891 tatgcaccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 14664979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 21969583 - 21969667
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| |||||||| |||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  21969583 tattctcagcatcctttcttcccgccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 21969667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 44562974 - 44563050
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  44562974 tctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaacctcaggtacccgttaatgc 44563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 31490101 - 31490014
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  31490101 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattg 31490014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 3329867 - 3329817
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  3329867 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgcca 3329817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 9354495 - 9354571
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  9354495 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 9354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 18710456 - 18710532
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| ||||| |||||    
T  18710456 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcccgtcaatgc 18710532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 19659381 - 19659305
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  19659381 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 19659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 31354391 - 31354458
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  31354391 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 31354458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 12093081 - 12093031
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  12093081 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 12093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 29829180 - 29829230
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  29829180 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 29829230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 19208708 - 19208659
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19208708 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19208659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 28362303 - 28362254
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28362303 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28362254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 33258590 - 33258639
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  33258590 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 33258639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 19286335 - 19286416
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||| ||| | || | ||||||||| || || ||||| ||||    
T  19286335 tctcagcatccgttcttcccaccgttttatcatcagtaccctttaccaccgggccaacctcaggttcctgtcaatgccattg 19286416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 21703548 - 21703460
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  21703548 tatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 21703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 31891700 - 31891624
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  31891700 tctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaacctcaggtacccgttaatgc 31891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 16829719 - 16829666
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  16829719 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 16829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 16891762 - 16891815
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  16891762 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 16891815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 3784523 - 3784599
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  3784523 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 3784599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 27118557 - 27118633
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  27118557 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 27118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 27777070 - 27777154
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||||||||| || ||  ||||| |||| | |||||| || ||||| ||||| ||||    
T  27777070 tattctcagcatcctttcttcccaccgttttaccatcagtaccccctgccaccaggtcaacctcaagtgcccgtcaatgcaattg 27777154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 27816837 - 27816921
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||||||||| || ||  ||||| |||| | |||||| || ||||| ||||| ||||    
T  27816837 tattctcagcatcctttcttcccaccgttttaccatcagtaccccctgccaccaggtcaacctcaagtgcccgtcaatgcaattg 27816921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 34156880 - 34156956
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  34156880 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 34156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 37925356 - 37925440
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  37925356 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattg 37925440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 34303675 - 34303600
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatg 91  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| ||||    
T  34303675 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatg 34303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 39889925 - 39889975
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  39889925 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 39889975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 9350372 - 9350335
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9350372 tattctcagcatcctttcttcccaccgttttaccatca 9350335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 12586664 - 12586701
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12586664 tattctcagcatcctttcttcccaccgttttaccatca 12586701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 19416877 - 19416828
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19416877 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19416828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 22926406 - 22926357
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  22926406 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 22926357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 27803555 - 27803592
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27803555 tattctcagcatcctttcttcccaccgttttaccatca 27803592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 31876144 - 31876193
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31876144 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31876193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 34861543 - 34861592
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  34861543 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 34861592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 37686287 - 37686238
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37686287 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37686238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 37701552 - 37701503
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37701552 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37701503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 261143 - 261059
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  261143 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 261059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 16163468 - 16163544
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||||||||||||||| |||||    
T  16163468 tctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaacctcaggtacccgttaatgc 16163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 39052203 - 39052169
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  39052203 tctcagcatccgttcttcccaccgttttaccatca 39052169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 40233365 - 40233399
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  40233365 tctcagcatccgttcttcccaccgttttaccatca 40233399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 11635567 - 11635483
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  11635567 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11635483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 11641756 - 11641672
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  11641756 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11641672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 37375027 - 37375091
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| |||||||| |||||||| ||||| || ||||||||| | || | |||||||||    
T  37375027 tctcagcatccgttcttcccgccgttttatcatcagtaccctttgccaccgggccaacctcaggt 37375091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 30168342 - 30168429
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  30168342 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattg 30168429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 18375701 - 18375648
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  18375701 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 18375648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 33516229 - 33516282
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  33516229 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 33516282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 11325676 - 11325752
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||  |||| ||||||||||||||| |||||    
T  11325676 tctcagcatcccttctttccaccattctatcatcagtatcctttgccattgggacaacctcaggtacccgttaatgc 11325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 13184928 - 13184852
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  13184928 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 13184852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 13440774 - 13440698
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  13440774 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 13440698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 22888340 - 22888428
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | |||||||||| |||| |||||    
T  22888340 tatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtaaccgttaatgc 22888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 31431304 - 31431388
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  31431304 tattctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 31431388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 33292395 - 33292471
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  33292395 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 33292471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 33877129 - 33877205
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  33877129 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 33877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 32599755 - 32599688
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  32599755 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 32599688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 6874178 - 6874228
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  6874178 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 6874228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 28960084 - 28960034
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  28960084 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 28960034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 34616397 - 34616447
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  34616397 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 34616447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 37358941 - 37358891
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  37358941 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 37358891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 37671778 - 37671728
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  37671778 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 37671728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 2510927 - 2510976
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  2510927 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 2510976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 3789405 - 3789486
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || |  |||||||| ||||| ||||| ||||    
T  3789405 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccagcctcaggtgcccgtcaatgcaattg 3789486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 5637786 - 5637835
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5637786 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9317327 - 9317376
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9317327 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9317376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 12132031 - 12132080
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  12132031 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 12132080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 15759143 - 15759094
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  15759143 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 15759094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 26480268 - 26480317
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26480268 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26480317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 29967352 - 29967303
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  29967352 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 30029291 - 30029340
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  30029291 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 30029340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 30151894 - 30151943
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  30151894 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 30151943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 31826705 - 31826656
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31826705 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31826656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 37754844 - 37754893
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37754844 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37754893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 37771285 - 37771236
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37771285 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37771236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 18501034 - 18500950
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  18501034 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 18500950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 23892085 - 23892161
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||| | || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  23892085 tctcagcatcctttctttccaacattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgtcaatgc 23892161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 43078125 - 43078209
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  43078125 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 43078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 13325130 - 13325080
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  13325130 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 13325080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 25198911 - 25198977
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtac 82  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | |||||||||||    
T  25198911 tctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtac 25198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 40473835 - 40473801
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  40473835 tctcagcatccgttcttcccaccgttttaccatca 40473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 24969891 - 24969984
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||| || |||||||||||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||    
T  24969891 tatgcgccgtattctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 24969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 9548829 - 9548745
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  9548829 tattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 9548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 15659046 - 15658962
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||| || |||||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  15659046 tattctcagcatcctttctttccgccgttttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 15658962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 41674589 - 41674669
Alignment:
Q  17 ctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||| ||||| || || ||||||||||| || ||| ||||| | || |||||||| |||||||| ||||| ||||    
T  41674589 ctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtccacctcaagtacccgtcaatgcaattg 41674669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 5596796 - 5596729
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  5596796 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 5596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 17985389 - 17985336
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  17985389 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 17985336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 4893032 - 4893108
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  4893032 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 4893108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 17994208 - 17994132
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  17994208 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 17994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 18225016 - 18225068
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  18225016 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 18225068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 22388014 - 22387938
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||| ||||||||| ||||||| ||||| || ||||||||| | || | |||||||||    
T  22388014 tatgcaccatactctcagcatccgttcttcccatcgttttatcatcagtaccctttgccaccgggccaacctcaggt 22387938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 22871304 - 22871220
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| |||| |  ||||| || ||||| ||||| ||||    
T  22871304 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaatgcaattg 22871220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 22886363 - 22886279
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| |||| |  ||||| || ||||| ||||| ||||    
T  22886363 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaatgcaattg 22886279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 32438976 - 32439052
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  32438976 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 32439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 36997519 - 36997435
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | ||||||||| ||||| ||||| ||||    
T  36997519 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccacccggccaacctcaggtgcccgtcaatgcaattg 36997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 47023281 - 47023365
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | ||||||||| ||||| ||||| ||||    
T  47023281 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaggtgcccgtcaatgcaattg 47023365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 4347114 - 4347047
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  4347114 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 4347047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 4625778 - 4625853
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatg 91  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| ||||    
T  4625778 tctcagcatcccttctttccaccattatatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatg 4625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 28021106 - 28021173
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  28021106 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 28021173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 29149185 - 29149106
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| |||||    
T  29149185 tattctcagcatcctttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgttaatgc 29149106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 6542904 - 6542854
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  6542904 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 6542854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 5013540 - 5013589
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5013540 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 5609752 - 5609703
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5609752 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5609703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 20577292 - 20577255
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20577292 tattctcagcatcctttcttcccaccgttttaccatca 20577255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 24327987 - 24328036
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  24327987 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 24328036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 28339130 - 28339179
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28339130 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28339179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29665412 - 29665331
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  29665412 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattg 29665331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 31964903 - 31964854
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31964903 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31964854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 50134501 - 50134452
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  50134501 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 50134452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8211572 - 8211636
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  8211572 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 8211636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 11110791 - 11110707
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  11110791 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 11110707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 16626942 - 16626854
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||| ||| ||||||||||| ||||| |||||||| || ||||| |||||| | ||||| || | ||||| ||||||||| |||||    
T  16626942 tatgcacaatactctcagcatcccttctttccaccgttctatcatcagtatcctctaccatcgggtcaacctccggtacccgttaatgc 16626854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18277479 - 18277415
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  18277479 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 18277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18292780 - 18292716
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  18292780 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 18292716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18308081 - 18308017
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  18308081 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 18308017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 5466813 - 5466880
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||| ||||| ||||| || ||||||||| | || | |||||||||    
T  5466813 tattctcagcatccgttcttcccaccattttatcatcagtaccctttgccacccggccaacctcaggt 5466880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 4416744 - 4416794
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| |||||  | |||||||||    
T  4416744 tattctcagcatccgttcttcccaccgttttatcatcagcaccctttgcca 4416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 48465746 - 48465780
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  48465746 tctcagcatccgttcttcccaccgttttaccatca 48465780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 51781842 - 51781876
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  51781842 tctcagcatccgttcttcccaccgttttaccatca 51781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 51796931 - 51796965
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  51796931 tctcagcatccgttcttcccaccgttttaccatca 51796965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 18242555 - 18242592
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18242555 tattctcagcatccgttcttcccaccgttttatcatca 18242592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 5652221 - 5652297
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||| ||||| ||| || | ||||||||||||||| |||||    
T  5652221 tctcagcatcccttctttccaccattctatcatcagtatcgtttgcaatcgggtcaacctcaggtacccgttaatgc 5652297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 28116387 - 28116303
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  28116387 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 28116303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2173 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold2173
Description:

Target: scaffold2173; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 90 - 135
Alignment:
Q  159 ttttgctaggcctacttttcctccaatcccggttttgtatgctgat 204  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  90 ttttgctaggcctacttttcctccaatcccgatgttgtatgctgat 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2173; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 98
Target Start/End: Original strand, 1 - 32
Alignment:
Q  67 ggaccacctcaggtacccgtgaatgctattgt 98  Q
    ||||||||||||||||||||||||||||||||    
T  1 ggaccacctcaggtacccgtgaatgctattgt 32  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 15322 - 15269
Alignment:
Q  10 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  15322 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 15269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 3041 - 2965
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  3041 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgtcaatgc 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 20270 - 20358
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||| ||||| ||||||||||| ||||| ||| | || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  20270 tatgcgccatactctcagcatcccttctttccatcattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 20358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 5159381 - 5159457
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  5159381 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 5159457  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 16450267 - 16450199
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtaccc 84  Q
    ||||||||||| ||||| ||||| ||||| ||||| |||||||||||||| || | |||||||||||||    
T  16450267 tctcagcatcccttctttccaccattttatcatcagtatcctttgccatcgggtcaacctcaggtaccc 16450199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 31088733 - 31088657
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  31088733 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 31088657  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 45733334 - 45733410
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  45733334 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 45733410  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 4145398 - 4145331
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 80  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  4145398 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 4145331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 16041185 - 16041267
Alignment:
Q  4 tatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgt 86  Q
    ||||| ||||| ||||||||||| ||||| ||||| || || ||||| ||||||||| |||| || | |||||||||||||||    
T  16041185 tatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgtcatcgggtcaacctcaggtacccgt 16041267  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 5147612 - 5147531
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5147612 tctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9618519 - 9618568
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9618519 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9618568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 24592816 - 24592767
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  24592816 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 24592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 26275369 - 26275320
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26275369 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26275320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 26320144 - 26320095
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26320144 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26320095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 26435128 - 26435209
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  26435128 tctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 26435209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 26670189 - 26670140
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26670189 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 11441428 - 11441512
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  11441428 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 11441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 31124779 - 31124827
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgc 61  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||    
T  31124779 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgc 31124827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 3445165 - 3445199
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  3445165 tctcagcatccgttcttcccaccgttttaccatca 3445199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 26486016 - 26485982
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  26486016 tctcagcatccgttcttcccaccgttttaccatca 26485982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 26538145 - 26538111
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatca 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  26538145 tctcagcatccgttcttcccaccgttttaccatca 26538111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 31564674 - 31564624
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  31564674 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 31564624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 5127860 - 5127944
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 97  Q
    |||||||||||||| ||||| || || ||||| ||||| |||||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5127860 tattctcagcatcctttctttccgccattttatcatcagtatcctctgccaccgggtcaacctcaagtacccgttaatgcaattg 5127944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 20340718 - 20340642
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  20340718 tctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgtcaatgc 20340642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 51638084 - 51638134
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  51638084 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 51638134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 10962536 - 10962585
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  10962536 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 10962585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 28584847 - 28584896
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28584847 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28584896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 20460977 - 20461053
Alignment:
Q  16 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 92  Q
    ||||||||||| ||||| ||||| || || |||||||||||| | ||||| || | ||||||||||||||| |||||    
T  20460977 tctcagcatcctttctttccaccattctatcatcaatatcctctaccatcgggtcaacctcaggtacccgttaatgc 20461053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 7804 - 7854
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 63  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  7804 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 7854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 122 - 73
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  122 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 7628 - 7579
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  7628 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 7579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 9455 - 9406
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9455 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 19882 - 19931
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 62  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19882 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 26591 - 26554
Alignment:
Q  13 tattctcagcatccattcttcccaccgttttaccatca 50  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26591 tattctcagcatccgttcttcccaccgttttatcatca 26554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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