View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8862_high_7 (Length: 343)
Name: NF8862_high_7
Description: NF8862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8862_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 31870225 - 31869904
Alignment:
| Q |
1 |
gttgataggttgaaatggggtaatgagattatgaagaagaggatgggtcctcctacacaggctgagattaatccacaaaccttaaagaggattcaaaggt |
100 |
Q |
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| T |
31870225 |
gttgataggttgaaatggggtaatgagattatgaagaagaagatgggtcctcctacacaggctgagattaatccacaaaccttaaagaggattcaaaggt |
31870126 |
T |
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| Q |
101 |
gaccctgcttaatcttggtttttgttttagttaattttgattttagttaaaaggagtttgaagtaaattgatttgtgctgaaaagtaacttaacaacaaa |
200 |
Q |
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| T |
31870125 |
gaccctgcttaatcttggtttttgttttagttaattttgattttagttaaaaggagtttgaagtaaattgatttgtgttgaaaagtaacttaacaac--- |
31870029 |
T |
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| Q |
201 |
acaaaattgtgcacggtttagtttatattggctttgtatag-tttgcttgatgttgaaactttaaacatgcatcggggtaatgtagtgtaacgttttaaa |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31870028 |
--aaaattgtgcacggtttagtttatattggctttgtatagttttgcttgatgttgaaactttaaacatgcatcggggtaatgtagtgtaacgttttaaa |
31869931 |
T |
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| Q |
300 |
ttgtggtcgcgccatggtccttgatat |
326 |
Q |
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| T |
31869930 |
ttgtggtcgcgccatggtccttgatat |
31869904 |
T |
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