View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8862_low_11 (Length: 297)
Name: NF8862_low_11
Description: NF8862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8862_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 35266301 - 35266572
Alignment:
| Q |
2 |
tcggttcctctttctcaagtgctacgtctctccgatacaatcggtaaccgtcacttgttcgtagacttcgctccattccgccgtaataccaagcggtgca |
101 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35266301 |
tcggtttctctttctcaagtgctacgtctctccgatacaatcggtaaccgtcacttgttcgtagacttcgctccattccgccgtaataccaagcggtgca |
35266400 |
T |
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| Q |
102 |
accgtagattgacgccggcgattctccgtcggagctccgttaaagctgttcttcaacttgataataatcatctcaatcctgctcctcctccttcttcgcc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35266401 |
accgtagattgacgccggcgattctccgtcggagctccgttaaagctgttcttcaacttgataataatcatctcaatcctgctcctcctccttcttcgcc |
35266500 |
T |
|
| Q |
202 |
gtcaacttccgattccaaacccaaggtccggtttcttcatccgttgctatttttgcacaaccatttcgtaat |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
35266501 |
gtcaacttccgattccaaacccaaggtccggtttcttcatccgttgctatttttgcacaacgatttcgtaat |
35266572 |
T |
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