View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8864_high_10 (Length: 241)
Name: NF8864_high_10
Description: NF8864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8864_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 35059929 - 35060152
Alignment:
| Q |
1 |
cctctaccgtcgtctaatcctcctcaatccatccataaccaccatctccaacctctccataacccccttctccgatggctacgacgacggtttcatcgcc |
100 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
35059929 |
cctctaccgtcgtttaatcctcctcaatccatccataaccaccatctccaacctctccataacccccttctccgatggctacaacgacggtttcatcgcc |
35060028 |
T |
|
| Q |
101 |
atcacaaacaccgacgctgatttccaccaatacacctcacagttcaacacccgtggctccgacttcatcaccaatctcatactctctgccaaacaagaat |
200 |
Q |
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|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35060029 |
atcacaaacaccgacgctgatttccatcaatacacctcacagttcaacacccgtggctccgacttcatcaccaatctcatactctctgccaaacaagaat |
35060128 |
T |
|
| Q |
201 |
ccaaacctttcacttgcttactct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
35060129 |
ccaaacctttcacttgcttactct |
35060152 |
T |
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