View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8864_low_16 (Length: 230)
Name: NF8864_low_16
Description: NF8864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8864_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 7709375 - 7709181
Alignment:
| Q |
24 |
tattacgttaatgaaaatttaatgtgtgtgaagaatgtgtgaataaatgaagcaatatatagaagatagtatagattatgaagattcacataaattaatg |
123 |
Q |
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| T |
7709375 |
tattacgttaatgaaaatttaatgtgtttgaagaatgtgtgaataaatgaagcaatatatagaagatagtatagattatgaagattcacataaattaatg |
7709276 |
T |
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| Q |
124 |
attaacactggttcattcaatttggactaatattgtctttacaacttgtgaannnnnnnnnactagggcttgaaattcgtcatctgatctctgct |
218 |
Q |
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|||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
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| T |
7709275 |
attaacacaggttcattcaatttggactaatcttgtctttacaacttgtgattttttttttactagggcttgaaattcgtcatctgatctgtgct |
7709181 |
T |
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