View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8867_low_2 (Length: 307)
Name: NF8867_low_2
Description: NF8867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8867_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 21 - 303
Target Start/End: Original strand, 2740686 - 2740968
Alignment:
| Q |
21 |
atagtatttacagcagaagtgttcaatgaaggtgtattggtggaaagcattcatatcatggttgtggtatagtggaattgaggttatcacatattgttca |
120 |
Q |
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| T |
2740686 |
atagtatttacagcagaagtgttcaatgaaggtgtgttggtggaaaacattcatatcatggttgtggtatagtggaattgaggttatcacatattgttca |
2740785 |
T |
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| Q |
121 |
tactacattaaatatctcttagattgaggctaattatgatctcaaataagcatgatgtttaatttattgacaacgattactatatgcatgatgtcttaaa |
220 |
Q |
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| T |
2740786 |
tactacattaaatatctcttagattgaggctaattatgatctcaaataagcatgatgtttaatttattgacaacgattattatatgcatgatgtcttaaa |
2740885 |
T |
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| Q |
221 |
tgataaataatcttatacaagtataaatacatacaacttgactattgccaaatttgaaattcactttataagaataatctacc |
303 |
Q |
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| T |
2740886 |
tgataaataatcttatacaagtataaatacatacaacttgactattgccaaatttgaaattcactttataggattaatctacc |
2740968 |
T |
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