View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8867_low_3 (Length: 248)
Name: NF8867_low_3
Description: NF8867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8867_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7748962 - 7749143
Alignment:
| Q |
1 |
tccaaatgagactgattgtccaagtgcatgatttgtgttgatgttctgaaatgaataggtttcatagtgttttcaatgtgaacattcacaaaacaaatgt |
100 |
Q |
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| T |
7748962 |
tccaaatgagactgattgtccaagtgcatgatttgtgttgatgttctgaaatgaataagtttcatagttttttcaatgtgaacattcacaaaacatatgt |
7749061 |
T |
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| Q |
101 |
annnnnnnnatcaatctaacctatcaatata--ccaaaaacaaaaccttaa---ttaatgtatcatgttatgatgtaatatg |
177 |
Q |
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| T |
7749062 |
attttttcgatcaattcaacctatccatatactcccaaaacaaaatcttaatgtttaatgtatcatgttatgatgtaatatg |
7749143 |
T |
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