View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8868_low_7 (Length: 254)
Name: NF8868_low_7
Description: NF8868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8868_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 4983651 - 4983856
Alignment:
| Q |
5 |
aagaggcaaatacaatgttcaatgaatctaatagttcccttttacttggcaatccaaacgtttccaatttattatctgattctagttggtgcattataat |
104 |
Q |
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| T |
4983651 |
aagagtcaaatacaatgttcaatgaatctaatagttccctttcacttggcaatccaaacgtttccaatttattatctgattctagttggtgcattataat |
4983750 |
T |
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| Q |
105 |
ttatgtccttctagttggtgatagacatatttaagaaatttcatcaaagaaaagttaacaaggaaattagatgaatggaaattgacaggaaggtatatgg |
204 |
Q |
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| T |
4983751 |
ttatgtccttctagttggtgatagacatatttaagaaatttcatcaaagaaaagttaacaaggaaattagatgaatggaaattgacaggaaggtatatgg |
4983850 |
T |
|
| Q |
205 |
tagaag |
210 |
Q |
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|||||| |
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| T |
4983851 |
tagaag |
4983856 |
T |
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