View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8869_high_6 (Length: 334)

Name: NF8869_high_6
Description: NF8869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8869_high_6
NF8869_high_6
[»] chr5 (29 HSPs)
chr5 (15-188)||(39062505-39062677)
chr5 (189-270)||(34650833-34650914)
chr5 (189-268)||(13661915-13661994)
chr5 (189-270)||(8787444-8787525)
chr5 (188-269)||(10054352-10054433)
chr5 (189-270)||(11957967-11958048)
chr5 (189-270)||(35504241-35504321)
chr5 (189-270)||(35132627-35132707)
chr5 (197-270)||(4268666-4268739)
chr5 (187-240)||(19647675-19647728)
chr5 (195-270)||(6283667-6283742)
chr5 (189-264)||(11846183-11846258)
chr5 (188-270)||(21547393-21547475)
chr5 (189-270)||(40564404-40564485)
chr5 (212-270)||(12506401-12506459)
chr5 (195-261)||(14214055-14214121)
chr5 (189-270)||(10956056-10956137)
chr5 (188-261)||(31467834-31467907)
chr5 (188-270)||(9721607-9721688)
chr5 (195-247)||(10955957-10956009)
chr5 (188-270)||(40057412-40057494)
chr5 (189-261)||(1383273-1383346)
chr5 (226-271)||(39069482-39069527)
chr5 (195-261)||(30889436-30889502)
chr5 (189-226)||(8927556-8927593)
chr5 (189-238)||(10070086-10070135)
chr5 (221-270)||(20175332-20175381)
chr5 (186-226)||(1919622-1919662)
chr5 (274-319)||(39062669-39062716)
[»] chr8 (53 HSPs)
chr8 (186-270)||(34228787-34228871)
chr8 (189-270)||(168571-168652)
chr8 (189-270)||(4537744-4537825)
chr8 (189-270)||(27988500-27988580)
chr8 (189-270)||(28045802-28045882)
chr8 (187-270)||(16394059-16394142)
chr8 (188-270)||(16888543-16888625)
chr8 (189-270)||(2805260-2805341)
chr8 (190-270)||(30675574-30675653)
chr8 (191-270)||(16890482-16890561)
chr8 (182-270)||(7304511-7304599)
chr8 (189-270)||(11112744-11112825)
chr8 (178-270)||(20831542-20831634)
chr8 (189-270)||(9063052-9063133)
chr8 (189-270)||(29444140-29444221)
chr8 (189-270)||(42034981-42035062)
chr8 (194-270)||(9253907-9253983)
chr8 (189-261)||(13643125-13643197)
chr8 (189-261)||(13743550-13743622)
chr8 (191-270)||(39406947-39407024)
chr8 (187-270)||(43119322-43119404)
chr8 (196-270)||(21595951-21596025)
chr8 (208-270)||(33357148-33357210)
chr8 (196-270)||(36730549-36730622)
chr8 (188-264)||(9537823-9537899)
chr8 (198-270)||(12203959-12204031)
chr8 (198-270)||(12448387-12448459)
chr8 (210-269)||(37373311-37373370)
chr8 (192-270)||(28626873-28626950)
chr8 (189-270)||(3930233-3930314)
chr8 (189-257)||(2490157-2490225)
chr8 (189-248)||(10618125-10618184)
chr8 (208-270)||(16785191-16785253)
chr8 (189-270)||(32114013-32114095)
chr8 (189-270)||(4648299-4648380)
chr8 (187-231)||(9934557-9934601)
chr8 (195-270)||(42433550-42433625)
chr8 (232-270)||(10870457-10870495)
chr8 (188-270)||(29235340-29235422)
chr8 (177-270)||(24843268-24843360)
chr8 (187-228)||(43723731-43723772)
chr8 (189-231)||(18955840-18955882)
chr8 (203-261)||(39751485-39751543)
chr8 (188-270)||(40831382-40831464)
chr8 (198-258)||(39206303-39206363)
chr8 (189-261)||(40268036-40268108)
chr8 (189-261)||(43714188-43714260)
chr8 (235-270)||(22956810-22956845)
chr8 (195-226)||(29566706-29566737)
chr8 (189-226)||(16063089-16063126)
chr8 (189-226)||(45185052-45185089)
chr8 (195-231)||(13643018-13643054)
chr8 (195-231)||(13743443-13743479)
[»] chr3 (39 HSPs)
chr3 (186-270)||(10617281-10617365)
chr3 (188-268)||(46352741-46352821)
chr3 (189-270)||(858694-858775)
chr3 (189-269)||(39074524-39074604)
chr3 (188-270)||(272325-272407)
chr3 (188-270)||(6842724-6842806)
chr3 (188-270)||(49893436-49893518)
chr3 (189-270)||(4168288-4168369)
chr3 (189-270)||(43786976-43787057)
chr3 (189-270)||(52520786-52520867)
chr3 (189-270)||(48725376-48725457)
chr3 (189-270)||(40362580-40362661)
chr3 (189-270)||(18014777-18014858)
chr3 (194-270)||(41304108-41304184)
chr3 (201-270)||(2505454-2505523)
chr3 (189-270)||(2938040-2938121)
chr3 (189-270)||(11308211-11308291)
chr3 (189-266)||(43269739-43269816)
chr3 (190-270)||(49529269-49529347)
chr3 (189-270)||(42964249-42964330)
chr3 (189-270)||(53489824-53489905)
chr3 (186-270)||(7468516-7468598)
chr3 (190-270)||(24488471-24488551)
chr3 (190-270)||(33140990-33141070)
chr3 (195-262)||(42548208-42548274)
chr3 (188-270)||(41553939-41554021)
chr3 (209-270)||(38852322-38852383)
chr3 (186-270)||(50359183-50359267)
chr3 (192-270)||(20924097-20924173)
chr3 (224-270)||(22248991-22249037)
chr3 (222-270)||(28139414-28139462)
chr3 (189-269)||(50395563-50395643)
chr3 (186-257)||(52246701-52246771)
chr3 (221-270)||(41993652-41993700)
chr3 (189-230)||(53163911-53163952)
chr3 (220-270)||(50298976-50299026)
chr3 (188-258)||(52552590-52552659)
chr3 (189-257)||(51665715-51665783)
chr3 (222-270)||(13160002-13160050)
[»] chr1 (54 HSPs)
chr1 (190-270)||(38162955-38163035)
chr1 (189-270)||(5694426-5694507)
chr1 (189-270)||(51065748-51065829)
chr1 (189-270)||(15227844-15227925)
chr1 (189-270)||(29657876-29657957)
chr1 (188-270)||(30294380-30294462)
chr1 (189-270)||(12072062-12072143)
chr1 (189-270)||(18043267-18043348)
chr1 (189-270)||(42769990-42770071)
chr1 (189-270)||(47010098-47010179)
chr1 (181-270)||(48383103-48383192)
chr1 (186-270)||(24178460-24178544)
chr1 (189-270)||(3784713-3784794)
chr1 (189-270)||(19031815-19031896)
chr1 (189-270)||(45449244-45449325)
chr1 (188-270)||(9266727-9266809)
chr1 (188-270)||(19010686-19010768)
chr1 (188-270)||(41730413-41730495)
chr1 (189-270)||(14350279-14350358)
chr1 (190-270)||(13961316-13961396)
chr1 (189-270)||(38701937-38702014)
chr1 (189-270)||(17333284-17333363)
chr1 (188-256)||(30657721-30657789)
chr1 (189-270)||(3097764-3097842)
chr1 (189-240)||(29210529-29210580)
chr1 (188-265)||(23473463-23473540)
chr1 (188-261)||(28725904-28725977)
chr1 (189-270)||(50128172-50128253)
chr1 (189-270)||(43286827-43286910)
chr1 (186-262)||(47532668-47532744)
chr1 (215-270)||(12307022-12307077)
chr1 (212-271)||(35985644-35985703)
chr1 (220-270)||(36446356-36446406)
chr1 (189-270)||(8472914-8472995)
chr1 (189-270)||(45431383-45431464)
chr1 (189-270)||(6770442-6770519)
chr1 (189-253)||(26228300-26228364)
chr1 (186-270)||(48071587-48071670)
chr1 (214-270)||(51368810-51368866)
chr1 (189-240)||(21112681-21112732)
chr1 (189-240)||(21117423-21117474)
chr1 (220-270)||(29683301-29683351)
chr1 (188-270)||(30217867-30217947)
chr1 (195-261)||(30664173-30664239)
chr1 (188-261)||(38595751-38595824)
chr1 (189-261)||(10679629-10679701)
chr1 (186-261)||(23822520-23822593)
chr1 (195-258)||(52431697-52431761)
chr1 (189-246)||(28481973-28482028)
chr1 (195-226)||(13961218-13961249)
chr1 (227-270)||(38335274-38335317)
chr1 (220-270)||(52749707-52749757)
chr1 (189-269)||(11796971-11797050)
chr1 (195-247)||(28726034-28726086)
[»] chr2 (40 HSPs)
chr2 (187-270)||(30486315-30486398)
chr2 (189-270)||(20553036-20553117)
chr2 (187-270)||(32360867-32360950)
chr2 (188-270)||(31390117-31390199)
chr2 (189-270)||(22068320-22068401)
chr2 (189-270)||(27856396-27856477)
chr2 (189-270)||(31438751-31438832)
chr2 (189-270)||(44588007-44588088)
chr2 (189-270)||(4381900-4381981)
chr2 (188-270)||(6580294-6580373)
chr2 (188-270)||(22887855-22887937)
chr2 (189-262)||(22567715-22567788)
chr2 (189-270)||(34442533-34442613)
chr2 (189-270)||(3668113-3668194)
chr2 (189-270)||(26387064-26387145)
chr2 (189-270)||(28601071-28601152)
chr2 (190-268)||(4022480-4022558)
chr2 (189-270)||(35851750-35851832)
chr2 (189-270)||(8969407-8969488)
chr2 (213-270)||(13574053-13574110)
chr2 (191-270)||(561520-561599)
chr2 (195-270)||(1859267-1859342)
chr2 (196-270)||(25782840-25782914)
chr2 (220-270)||(38590905-38590955)
chr2 (188-257)||(31782564-31782633)
chr2 (189-270)||(32860207-32860287)
chr2 (189-262)||(5093540-5093612)
chr2 (188-261)||(45262024-45262097)
chr2 (190-270)||(2898176-2898256)
chr2 (195-270)||(43637269-43637343)
chr2 (226-270)||(11021259-11021303)
chr2 (190-270)||(27584843-27584922)
chr2 (189-226)||(19036965-19037002)
chr2 (188-261)||(26270098-26270171)
chr2 (222-270)||(5881326-5881374)
chr2 (227-270)||(10820587-10820630)
chr2 (188-230)||(29771568-29771610)
chr2 (195-231)||(5282256-5282292)
chr2 (222-262)||(25772224-25772264)
chr2 (188-240)||(26891682-26891733)
[»] chr7 (41 HSPs)
chr7 (188-270)||(24438582-24438664)
chr7 (186-270)||(24798400-24798484)
chr7 (189-269)||(34333389-34333469)
chr7 (189-270)||(34606366-34606447)
chr7 (186-268)||(4628673-4628755)
chr7 (188-270)||(5239390-5239472)
chr7 (189-270)||(13064876-13064957)
chr7 (188-262)||(29993486-29993560)
chr7 (193-270)||(18486066-18486143)
chr7 (189-270)||(42044294-42044374)
chr7 (189-270)||(12218437-12218517)
chr7 (210-270)||(45045875-45045935)
chr7 (176-270)||(525063-525156)
chr7 (210-270)||(47839597-47839657)
chr7 (189-270)||(23363167-23363248)
chr7 (189-270)||(30810760-30810841)
chr7 (197-270)||(47083160-47083232)
chr7 (189-261)||(38128406-38128478)
chr7 (191-270)||(28588014-28588093)
chr7 (188-261)||(6097451-6097524)
chr7 (213-270)||(7689224-7689281)
chr7 (194-270)||(1737085-1737160)
chr7 (190-258)||(5729463-5729531)
chr7 (190-270)||(23357711-23357791)
chr7 (194-270)||(28262131-28262207)
chr7 (190-257)||(11686324-11686390)
chr7 (220-270)||(43594067-43594117)
chr7 (221-270)||(8754617-8754666)
chr7 (189-262)||(46716751-46716824)
chr7 (222-257)||(47657096-47657131)
chr7 (213-270)||(18117248-18117305)
chr7 (188-257)||(29835703-29835771)
chr7 (189-261)||(19434608-19434679)
chr7 (214-270)||(33636557-33636613)
chr7 (195-226)||(30924140-30924171)
chr7 (188-270)||(22739929-22740011)
chr7 (189-258)||(34556892-34556959)
chr7 (189-238)||(37674106-37674153)
chr7 (209-270)||(18220691-18220752)
chr7 (189-226)||(36786057-36786094)
chr7 (213-261)||(32805653-32805701)
[»] chr6 (39 HSPs)
chr6 (189-270)||(32929508-32929589)
chr6 (189-270)||(392201-392282)
chr6 (189-270)||(23402243-23402324)
chr6 (188-270)||(3515871-3515953)
chr6 (189-270)||(4215800-4215881)
chr6 (189-270)||(32985193-32985274)
chr6 (189-270)||(27433597-27433678)
chr6 (188-270)||(12145116-12145198)
chr6 (189-270)||(18276612-18276696)
chr6 (176-270)||(35043994-35044086)
chr6 (189-262)||(2581065-2581138)
chr6 (189-270)||(26467124-26467205)
chr6 (195-270)||(7851165-7851240)
chr6 (186-270)||(1391175-1391259)
chr6 (195-270)||(2350757-2350832)
chr6 (212-266)||(29451138-29451192)
chr6 (193-270)||(3026013-3026090)
chr6 (189-266)||(12525828-12525905)
chr6 (202-270)||(5323505-5323573)
chr6 (189-261)||(34706835-34706907)
chr6 (189-270)||(13416960-13417040)
chr6 (189-270)||(25165413-25165494)
chr6 (189-240)||(34477569-34477620)
chr6 (213-270)||(1840271-1840328)
chr6 (209-270)||(11115117-11115178)
chr6 (208-265)||(22417303-22417360)
chr6 (189-270)||(28225325-28225406)
chr6 (189-270)||(29978337-29978417)
chr6 (217-268)||(961116-961167)
chr6 (195-261)||(34712131-34712197)
chr6 (188-240)||(20898064-20898115)
chr6 (189-270)||(21878353-21878428)
chr6 (188-270)||(31280426-31280502)
chr6 (189-262)||(34851849-34851922)
chr6 (197-257)||(1127934-1127994)
chr6 (222-270)||(28564340-28564388)
chr6 (189-251)||(34494276-34494338)
chr6 (189-226)||(8701343-8701380)
chr6 (233-270)||(9661091-9661128)
[»] scaffold0188 (1 HSPs)
scaffold0188 (189-270)||(6110-6191)
[»] chr4 (57 HSPs)
chr4 (189-270)||(33108673-33108754)
chr4 (176-270)||(4268809-4268903)
chr4 (189-270)||(7769043-7769124)
chr4 (189-270)||(29591294-29591375)
chr4 (189-265)||(16820962-16821038)
chr4 (189-270)||(16536153-16536234)
chr4 (189-270)||(18067879-18067960)
chr4 (188-270)||(6164198-6164280)
chr4 (188-270)||(12356349-12356431)
chr4 (189-270)||(4089247-4089328)
chr4 (189-270)||(50619191-50619271)
chr4 (186-270)||(789527-789611)
chr4 (188-270)||(43944612-43944693)
chr4 (188-270)||(54897413-54897495)
chr4 (189-270)||(36395204-36395285)
chr4 (189-270)||(43202384-43202464)
chr4 (189-270)||(32217150-32217230)
chr4 (189-270)||(55882788-55882868)
chr4 (189-270)||(3783498-3783582)
chr4 (188-270)||(39877246-39877330)
chr4 (188-268)||(5091611-5091689)
chr4 (186-270)||(19503102-19503186)
chr4 (188-270)||(15186348-15186424)
chr4 (219-269)||(52533815-52533865)
chr4 (198-270)||(47231881-47231953)
chr4 (189-245)||(54054659-54054715)
chr4 (198-261)||(28120058-28120121)
chr4 (195-261)||(292229-292295)
chr4 (191-270)||(39844012-39844086)
chr4 (189-270)||(4220300-4220380)
chr4 (189-270)||(37988040-37988121)
chr4 (189-261)||(28119906-28119978)
chr4 (222-270)||(30387167-30387215)
chr4 (189-261)||(37402759-37402830)
chr4 (190-268)||(28755727-28755803)
chr4 (188-270)||(30154162-30154244)
chr4 (189-257)||(31517284-31517351)
chr4 (210-270)||(31680484-31680544)
chr4 (189-257)||(50603346-50603414)
chr4 (190-257)||(16572488-16572555)
chr4 (203-270)||(46149044-46149111)
chr4 (198-257)||(53655887-53655946)
chr4 (191-270)||(54655879-54655957)
chr4 (188-258)||(5518885-5518954)
chr4 (194-240)||(46688229-46688275)
chr4 (188-270)||(54945779-54945859)
chr4 (189-270)||(32202481-32202561)
chr4 (189-262)||(53003956-53004029)
chr4 (222-270)||(24679676-24679723)
chr4 (195-226)||(789679-789710)
chr4 (198-261)||(6493708-6493771)
chr4 (202-270)||(42898757-42898827)
chr4 (189-231)||(8749796-8749838)
chr4 (188-226)||(10426066-10426104)
chr4 (213-270)||(41265563-41265620)
chr4 (195-258)||(10110007-10110068)
chr4 (230-258)||(39877370-39877398)
[»] scaffold0425 (1 HSPs)
scaffold0425 (188-270)||(10815-10897)
[»] scaffold0190 (1 HSPs)
scaffold0190 (188-270)||(15001-15083)
[»] scaffold0003 (1 HSPs)
scaffold0003 (189-270)||(53685-53766)
[»] scaffold0021 (1 HSPs)
scaffold0021 (189-268)||(116311-116390)
[»] scaffold0014 (1 HSPs)
scaffold0014 (187-270)||(68288-68371)
[»] scaffold0113 (1 HSPs)
scaffold0113 (188-270)||(41024-41106)
[»] scaffold0264 (1 HSPs)
scaffold0264 (189-270)||(23066-23147)
[»] scaffold0007 (1 HSPs)
scaffold0007 (189-270)||(233958-234039)
[»] scaffold0034 (1 HSPs)
scaffold0034 (189-269)||(95585-95665)
[»] scaffold0045 (1 HSPs)
scaffold0045 (176-249)||(53344-53417)
[»] scaffold0674 (1 HSPs)
scaffold0674 (189-240)||(7916-7967)
[»] scaffold0549 (1 HSPs)
scaffold0549 (189-240)||(7404-7455)
[»] scaffold0038 (1 HSPs)
scaffold0038 (189-270)||(25823-25904)
[»] scaffold0524 (1 HSPs)
scaffold0524 (196-262)||(938-1004)
[»] scaffold0050 (1 HSPs)
scaffold0050 (189-270)||(69331-69411)
[»] scaffold1152 (1 HSPs)
scaffold1152 (187-270)||(783-865)
[»] scaffold0325 (1 HSPs)
scaffold0325 (220-270)||(17502-17552)
[»] scaffold0206 (1 HSPs)
scaffold0206 (186-238)||(10987-11038)
[»] scaffold0263 (1 HSPs)
scaffold0263 (188-270)||(19584-19666)
[»] scaffold1266 (1 HSPs)
scaffold1266 (222-270)||(397-445)
[»] scaffold0002 (1 HSPs)
scaffold0002 (222-270)||(146938-146986)
[»] scaffold0001 (1 HSPs)
scaffold0001 (189-258)||(508987-509058)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 5e-84; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 39062505 - 39062677
Alignment:
Q  15 atgttttgtaacaagaggaactatataatatgacaattatatccgtcaaataagatgacctaaatttaaggtgtttgatttacttatcaaaagggaaagt 114  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39062505 atgtttcgtaaca-gaggaactatataatatgacaattatatccgtcaaataagatgacctaaatttaaggtgtttgatttacttatcaaaagggaaagt 39062603  T
Q  115 gatcaaaatttcttcaaagataaatttagctctccgccaaactagaggatttgtaggggagataatatttcttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39062604 gatcaaaatttcttcaaagataaatttagctctccgccaaactagaggatctgtaggggagataatatttcttt 39062677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 34650833 - 34650914
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34650833 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 34650914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 13661994 - 13661915
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13661994 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagagaattattaccataaaaggaaactgttt 13661915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 8787525 - 8787444
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8787525 gggtcctgctaaccggtgcccccggggcacaggttaagcataccataaaatggaattattatcataaaaggaaactgttttt 8787444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 10054352 - 10054433
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  10054352 tgggtcctgctaaccggtacccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt 10054433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 11957967 - 11958048
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11957967 gggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgttttt 11958048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 35504241 - 35504321
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  35504241 gggtcctgctaaccggtgcccccgga-cacgggttaagcataccataaaagggaattattgccataaaagggaactgttttt 35504321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 35132707 - 35132627
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  35132707 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattaccat-aaagaaaactgttttt 35132627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 4268739 - 4268666
Alignment:
Q  197 ctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| || |||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  4268739 ctaaccggtgccccctggacacgggttaagcataccaaaaaagaaaattattaccataaaaggaaactgttttt 4268666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 19647675 - 19647728
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19647675 ttgggtccggctaaccggtgcccccggggcacgggttaagcataccataaaagg 19647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 6283742 - 6283667
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||||||||| ||| |||||||    
T  6283742 tgctaaccggtgcccctagggcactggttaagcataccataaaaatgaattattaccataaaagaaaattgttttt 6283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 11846258 - 11846183
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaact 264  Q
    ||||||||||||||  |||||  ||||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  11846258 gggtcctgctaacccatgccctaggggcactggttaagcatactataaaagggatttattaccataaaaggaaact 11846183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 21547393 - 21547475
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| | |||||| || |||||||||||||||||| | ||||||||| | ||||| ||||||||||||    
T  21547393 tgggtcctgctaaccggtgtctccggggtactggttaagcataccataaatgagaattattaacttaaaatgaaactgttttt 21547475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 40564404 - 40564485
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||  |||| |  |||||||||||||||||||| |||||||||||||||||  ||| |||||||    
T  40564404 gggtcctgctaaccggtgcccttggggtattggttaagcataccataaaagagaattattaccataaaaaaaaattgttttt 40564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 12506459 - 12506401
Alignment:
Q  212 ggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  12506459 ggggcactggttaagcattccataaaagagaattattactataaaaggaaactgttttt 12506401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 14214055 - 14214121
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||||||||||||||||| ||| |||||||||||| | |||||| |||| |||||||||||||||    
T  14214055 tgctaaccggtgcccccgggacaccggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 14214121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 10956137 - 10956056
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||| |   ||||| || ||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  10956137 gggtcttgctaaccggtacattcggggtactggttaagcatatcataaaaggaaattattaccataaaaggaaattgttttt 10956056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 31467907 - 31467834
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||||||| ||| ||||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  31467907 tgggtcttgctaaccggtgtccctggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 31467834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 9721607 - 9721688
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||||||||||||  || ||| |  |||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  9721607 tgggtcatgctaaccggtgccct-ggtgcatgaattaaacataccataaaagggaattattatcataaaagaaaactgttttt 9721688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 10955957 - 10956009
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattat 247  Q
    ||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  10955957 tgctaactgttgcctccggggcactggttaagcataccataaaagggaattat 10956009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 40057494 - 40057412
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||| |  || ||| |||||| || | |||||||||||| |||||| ||||||| |||||| ||||    
T  40057494 tgggtcctgctaaccggtgcctcgaggtcactggttaaacacatcataaaagggaaatattactataaaagaaaactgctttt 40057412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 1383273 - 1383346
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcatac-cataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||||||||||||| | ||| ||||||||||||||||  | |||||| |||| |||||||||||||||    
T  1383273 gggtcatgctaaccggtgcctctgggacacgggttaagcatacaaaaaaaaggaaattcttaccataaaaggaa 1383346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 39069527 - 39069482
Alignment:
Q  226 gcataccataaaagggaattattaccataaaaggaaactgtttttc 271  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||||    
T  39069527 gcatatcataaaagagaattattaccataaaaggaaattgtttttc 39069482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 30889436 - 30889502
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| ||||||| |||||| || |||||||||||| | |||||| |||| ||| |||||||||||    
T  30889436 tgctaatcggtgcctccggggtactggttaagcatacaaaaaaaggaaatttttatcataaaaggaa 30889502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 8927556 - 8927593
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  8927556 gggtcctgctaaccggtgcccctggggcactggttaag 8927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 10070135 - 10070086
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaa 238  Q
    ||||||||||||||||||| || ||| ||  |||||||||||||||||||    
T  10070135 gggtcctgctaaccggtgctcctgggacattggttaagcataccataaaa 10070086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 20175381 - 20175332
Alignment:
Q  221 gttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||  ||||||||||||||||| |||||||| ||| |||||||    
T  20175381 gttaagcatattataaaagggaattattatcataaaagaaaattgttttt 20175332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 1919662 - 1919622
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  1919662 tttgggtgttgctaaccggtgcccccggggcactggttaag 1919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 39062669 - 39062716
Alignment:
Q  274 tatttcttttacattttaa--cttcatcataatgtccttttatttcat 319  Q
    |||||||||||||||||||  ||||||||| |||| ||||||||||||    
T  39062669 tatttcttttacattttaaaacttcatcatgatgttcttttatttcat 39062716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 34228871 - 34228787
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34228871 tttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 34228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 168652 - 168571
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  168652 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgttttt 168571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 4537744 - 4537825
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4537744 gggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 4537825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 27988500 - 27988580
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27988500 gggtcctgctaaccggtgcccccggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 27988580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 28045802 - 28045882
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28045802 gggtcctgctaaccggtgcccccggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 28045882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 16394059 - 16394142
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  16394059 ttgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattagcataaaaggaaactgttttt 16394142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 16888543 - 16888625
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  16888543 tgggtcctgctaaccggtgcccccggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgttttt 16888625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 2805260 - 2805341
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2805260 gggtccggctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgctttt 2805341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 30675574 - 30675653
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30675574 ggtcctgctaaccggtgtccccggggcactggttaagcataccataaaa-ggaattattaccataaaaggaaactgttttt 30675653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 16890482 - 16890561
Alignment:
Q  191 gtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16890482 gtcctgctaaccggtgccccggaggcaccggttaagcataccataaaaaggaattattaccataaaaggaaactgttttt 16890561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 7304511 - 7304599
Alignment:
Q  182 tttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  7304511 tttctatgggtcctactaaccggtgcccccggagcactggttaagcataccataaaagagaattattttcataaaaggaaactgttttt 7304599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 11112825 - 11112744
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  11112825 gggtcctgctaaccagtgcccccagggcacaggttaagcataccataaaagtgaattattatcataaaagaaaactgttttt 11112744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 20831542 - 20831634
Alignment:
Q  178 aatatttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| | ||||||||||||||||||| ||| || |||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  20831542 aatatttatatgggtcctgctaaccggtgtcccgggagcactgattaagcataccataaaagagaattattaccataaaaggaaactgctttt 20831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 9063052 - 9063133
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||  ||||||||| ||||||||||| || |||||||||||||||||||||||| ||| |||||||    
T  9063052 gggtcctgctaaccggtgcttccggggcactggttaagcatatcacaaaagggaattattaccataaaagaaaattgttttt 9063133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 29444140 - 29444221
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| ||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  29444140 gggtcctgttaatcggtgcctccgggacactggttaaacataccataaaagggaattattaccataaaagaaaactgttttt 29444221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 42034981 - 42035062
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  42034981 gggtcccgctaaccggtgtctctggggcacgtgttaagcataccataaaagggaattattaccataaaagaaaattgttttt 42035062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 9253907 - 9253983
Alignment:
Q  194 ctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9253907 ctgctaaccggtgcccctgggacattggttaagcataccataaaagagaattattactataaaaggaaactgttttt 9253983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 13643197 - 13643125
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||||||||||||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  13643197 gggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaa 13643125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 13743622 - 13743550
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||||||||||||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  13743622 gggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaa 13743550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 39407024 - 39406947
Alignment:
Q  191 gtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  39407024 gtcctgctaaccggtgccc--ggggcactagttaaacataccataaaagggaattattatcataaaaggaaactgttttt 39406947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 43119404 - 43119322
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||| ||| ||  |||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  43119404 ttgggtcctgctaaccggtgcccc-gggccattggttaagcataccataaaagagaattatcaccataaaagaaaactgttttt 43119322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 21596025 - 21595951
Alignment:
Q  196 gctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| ||| | ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21596025 gctaaccagtgtctccgggacactggttaagcataccataaaagggaattaataccataaaaggaaactgttttt 21595951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 33357148 - 33357210
Alignment:
Q  208 ccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33357148 ccccggggcactagttaagcataccataaaagagaattattaccataaaaggaaactgttttt 33357210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 36730622 - 36730549
Alignment:
Q  196 gctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| | ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  36730622 gctaaccggtgccac-ggggcacaggttaagcatactataaaagagaattattaccataaaaggaaactgttttt 36730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 9537823 - 9537899
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaact 264  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||||||||||| ||||||||| |||||| ||||||    
T  9537823 tgggtcctgctaaccggtgtctccgggacactggttaagcataccataaaaggaaattattactataaaaagaaact 9537899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 12204031 - 12203959
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| || ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  12204031 taaccgatgtccccgggacactggttcagcataccataaaagggaattattatcataaaaggaaactgttttt 12203959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 12448459 - 12448387
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| || ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  12448459 taaccgatgtccccgggacactggttcagcataccataaaagggaattattatcataaaaggaaactgttttt 12448387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 37373370 - 37373311
Alignment:
Q  210 ccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  37373370 ccgggacacgggttaagcataccatgaaagggaattattaccataaaagaaaactgtttt 37373311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 28626950 - 28626873
Alignment:
Q  192 tcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| |||||  ||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  28626950 tcctgctaaccggtgctcccgga-cactgattaagcataccataaaagggaattattatcataaaaagaaactgttttt 28626873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 3930233 - 3930314
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| || ||| || ||||||| ||||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  3930233 gggtcctgctaatcgatgctcctggggcactggttaagcatatcataaaaggaaattattatcaaaaaaggaaactgttttt 3930314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 2490157 - 2490225
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||| |||||||||||||||||| |||||||||||||||||| | |||||| |||| |||||||||||    
T  2490157 gggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatttttaccataaaa 2490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 10618184 - 10618125
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattatt 248  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||    
T  10618184 gggtcctgctaaccggtgccccggagacacgggttaagcataccataaaaggtaattatt 10618125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 16785253 - 16785191
Alignment:
Q  208 ccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| ||||||||||||| ||||||||||||| |||||||||  |||||||||||||||||||    
T  16785253 cccctgggcacgggttaatcataccataaaagagaattattattataaaaggaaactgttttt 16785191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 32114095 - 32114013
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa-ggaaactgttttt 270  Q
    |||||||||||||||||| | | || |||| |||||| ||||| ||||||||||||||||| ||||||| |||||||||||||    
T  32114095 gggtcctgctaaccggtggctctggagcactggttaaacatactataaaagggaattattatcataaaagggaaactgttttt 32114013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 4648380 - 4648299
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||| |||  |  || ||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  4648380 gggtcatgctaaccggtgctcccaagatactggttaagcatatcataaaagggaattattaccatcaaaagaaactgttttt 4648299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 9934601 - 9934557
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcatac 231  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  9934601 ttgggtcctgctaaccggtgcccccggggcacgggttaaacatac 9934557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 42433550 - 42433625
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |||||||||   | ||| |||||| |||||| ||||||||||||||||| |||||||||||    
T  42433550 tgctaaccggtgcctccggggcacaaatgaagtataccaaaaaaggaaattattaccataaaagaaaactgttttt 42433625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 10870495 - 10870457
Alignment:
Q  232 cataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10870495 cataaaagggaattattaccataaaaggaaactgttttt 10870457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 29235422 - 29235340
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||  |||||| ||| |||||||||| | |||||||| |||||||| ||||||||||| || |||||    
T  29235422 tgggtcatgctaaccggtgttcccgggacactggttaagcatcctataaaaggaaattattatcataaaaggaacctattttt 29235340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 24843268 - 24843360
Alignment:
Q  177 taatatttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| | |||||||||||||||||||||| ||||    || | |||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  24843268 taatatgtttttgggtcctgctaaccggtgctcccgaat-actgattaagcataccataaaagagaattattgtcataaaaggaaactgatttt 24843360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 43723731 - 43723772
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagca 228  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  43723731 ttgggtgctgctaaccggtgcccccggggcacgggttaagca 43723772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 18955882 - 18955840
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcatac 231  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  18955882 gggtcatgctaaccggtgcccccggggcatgggttaagcatac 18955840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 39751485 - 39751543
Alignment:
Q  203 ggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||||||| ||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  39751485 ggtgcccccgaggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 39751543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 40831464 - 40831382
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| | || ||| || | ||| |||||| |||||||  ||||||||||||||||| ||| |||||||    
T  40831464 tgggtcctgctaaccggtgtctccagggtacagattatgcatactataaaagaaaattattaccataaaagaaaattgttttt 40831382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 39206363 - 39206303
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaag 258  Q
    ||||||||||||| ||||||| |||||||||||| | |||||| |||| ||| ||||||||    
T  39206363 taaccggtgccccgggggcaccggttaagcatacaaaaaaaggaaatttttatcataaaag 39206303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 40268108 - 40268036
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| || |||| ||||| || |||||||||||||| ||||| | |||||| |||||||| |||||||||||    
T  40268108 gggtcatgttaactggtgctcctggggcacgggttaaacatacaaaaaaaggaaattattatcataaaaggaa 40268036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 43714188 - 43714260
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||||||||||| ||| ||||||| |||||||||||| | ||||   |||| |||||||||||||||    
T  43714188 gggtcatgctaaccggtgtcccgggggcactggttaagcatacaaaaaaaataaatttttaccataaaaggaa 43714260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 22956845 - 22956810
Alignment:
Q  235 aaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22956845 aaaagggaatttttaccataaaaggaaactgttttt 22956810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 29566706 - 29566737
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaag 226  Q
    ||||||||||||||||||||||||||||||||    
T  29566706 tgctaaccggtgcccccggggcacgggttaag 29566737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 16063089 - 16063126
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  16063089 gggtgctgctaaccggtgctcccggggcacgggttaag 16063126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 45185089 - 45185052
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  45185089 gggtgctgctaaccggtgcccccggggcactggttaag 45185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 13643018 - 13643054
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcatac 231  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  13643018 tgctaaccggtgcccccggggcactggttaaggatac 13643054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 13743443 - 13743479
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcatac 231  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  13743443 tgctaaccggtgcccccggggcactggttaaggatac 13743479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 10617281 - 10617365
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10617281 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgttttt 10617365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 46352821 - 46352741
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46352821 tgggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 46352741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 858775 - 858694
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  858775 gggtccggctaaccggtgcccccggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgttttt 858694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 39074604 - 39074524
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39074604 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 39074524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 272407 - 272325
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  272407 tgggtcctgctaaccggtgcccccggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactattttt 272325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 6842806 - 6842724
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6842806 tgggtcctgctaaccgctgcccccggggcactggttaagcataccataaatgggaattattaccataaaaggaaactgttttt 6842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 49893518 - 49893436
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49893518 tgggtccggctaaccggtgcccccggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgttttt 49893436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 4168369 - 4168288
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  4168369 gggtcctgctaaccggtgcccccggggtacgggttaagcataccataaaagagaattattaccataaaagaaaactgttttt 4168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 43787057 - 43786976
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  43787057 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgttttt 43786976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 52520867 - 52520786
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  52520867 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgttttt 52520786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 48725457 - 48725376
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48725457 gggtcctgctaacccgtggtcccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 48725376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 40362580 - 40362661
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  40362580 gggtcctgctaatcggtacccccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgttttt 40362661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 18014858 - 18014777
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||| |||||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  18014858 gggtcttgctaactggtgcccccggggcactgattaagcataccataaaaggaaattattatcataaaaggaaactgttttt 18014777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 41304184 - 41304108
Alignment:
Q  194 ctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41304184 ctgctaaccggtgtctccggggcattggttaagcataccataaaaggaaattattaccataaaaggaaactgttttt 41304108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 2505523 - 2505454
Alignment:
Q  201 ccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  2505523 ccggtgcccccagggcactggttaaacataccataaaagggaattattaccataaaaggaaactattttt 2505454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 2938040 - 2938121
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  2938040 gggtcctgctaaccggtgccctcggggtactcgttaagcataccataaaagtgaattattaccataaaatgaaattgttttt 2938121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 11308211 - 11308291
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| ||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  11308211 gggtcctgctaatcggtgcccctggggcattggttaagcataccataaaa-ggaattattaccataaaaggaaactattttt 11308291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 43269739 - 43269816
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgt 266  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| |  ||||||||| |||||||||||||||    
T  43269739 gggtcctgctaaccggtgcctccggggcactggttaagcataccataaaggataattattactataaaaggaaactgt 43269816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 49529269 - 49529347
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||||||||||||||||||  ||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  49529269 ggtcttgctaaccggtgcccccgg--cactggttaaacataccataaaaggaaattattaccataaaaggaaaatgttttt 49529347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 42964249 - 42964330
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| ||| | | ||| ||||||||||| |||||||| |||||||||| ||||||| |||||||||||    
T  42964249 gggtcctgctaaccggtgtccctgagacactggttaagcatatcataaaagtgaattattactataaaagaaaactgttttt 42964330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 53489824 - 53489905
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| | |||| |||||| ||||||||  |||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  53489824 gggtccggttaactggtgccaccggggcattggttaagcataccataaaatagaattattatcataaaaggaaactgttttt 53489905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 7468598 - 7468516
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||| || ||||||| | |||||||||||||||||||| ||||||| |||||||| |||||| ||||    
T  7468598 tttgggtcctgctaaccggtgctcc-ggggcactgattaagcataccataaaaggg-attattatcataaaagaaaactgctttt 7468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 24488551 - 24488471
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||||||| ||||| ||||  ||| |||||| |||||||| ||||||||||||||||| ||||||||||||    
T  24488551 ggtcctgttaaccggtgctcccggagcactagttcagcatatcataaaagagaattattaccataaaaagaaactgttttt 24488471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 33141070 - 33140990
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||||||||||||  |||||| || | ||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  33141070 ggtcttgctaaccggtgcttccggggtactgattaagcatatcataaaagggaattattaccataaaagaaaactgctttt 33140990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 42548274 - 42548208
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  42548274 tgctaaccggtgtccc-ggagcactggttaagcataccataaaagggaattattaccataaaatgaaa 42548208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 41553939 - 41554021
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| |||| |||||  ||| ||||||  ||||||||||||||||||   |||||||||||||||||||||||||||||    
T  41553939 tgggtcctactaatcggtgttcccagggcacttgttaagcataccataaaaaataattattaccataaaaggaaactgttttt 41554021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 38852383 - 38852322
Alignment:
Q  209 cccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||||  |||||||||||    
T  38852383 cccggggcacgggttaaacataccataaaagtgaattattatcataaaataaaactgttttt 38852322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 50359183 - 50359267
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| | ||||||||||  ||||| ||| |||||||||||||||| |||  ||||||||||| ||||| |||||||||||    
T  50359183 tttgggtccggttaaccggtgcttccgggacactggttaagcataccatagaagataattattaccacaaaagaaaactgttttt 50359267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 20924173 - 20924097
Alignment:
Q  192 tcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| |   || ||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  20924173 tcctgctaaccggtgctca--ggacactggttaagtataccataaaagagaattattaccttaaaaggaaactgttttt 20924097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 22249037 - 22248991
Alignment:
Q  224 aagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  22249037 aagcatactataaaagggaattattaccataaaagaaaactgttttt 22248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 28139462 - 28139414
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  28139462 ttaagtataccataaaagggaattattaccataaaaggaatctgctttt 28139414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 50395563 - 50395643
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    |||||||||||| ||||| | |||| | || | |||| |||| |||||||| |||||||||||||||||||||| ||||||    
T  50395563 gggtcctgctaatcggtgtctccggtgtactgattaatcatatcataaaagagaattattaccataaaaggaaattgtttt 50395643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 52246771 - 52246701
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    |||||||||||||||| ||||| | |||| |||  |||||||||||||||||||| ||||||||| ||||||    
T  52246771 tttgggtcctgctaactggtgctctcggg-cactagttaagcataccataaaaggaaattattactataaaa 52246701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 41993652 - 41993700
Alignment:
Q  221 gttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  41993652 gttaagcataccataaaagagaattatta-tataaaaggaaactgttttt 41993700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 53163952 - 53163911
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcata 230  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  53163952 gggtcctgctaaccggtgcctccggggcacaggttaagcata 53163911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 50298976 - 50299026
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| ||||||||| || ||||||||| ||||||| ||||||||||||    
T  50298976 ggttaagtataccataagagtgaattattatcataaaaagaaactgttttt 50299026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 52552659 - 52552590
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaag 258  Q
    |||||| ||||||||| || ||||||  ||| ||||||  |||||||||||| ||||||||||||||||||    
T  52552659 tgggtcatgctaaccgatgtccccgga-cactggttaaatataccataaaagagaattattaccataaaag 52552590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 51665715 - 51665783
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcatac-cataaaagggaattattaccataaaa 257  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||  | |||||| |||| |||||||||||    
T  51665715 gggtcatgctaaccggtgtccc-ggggcacgggttaagcatacagaaaaaaggaaattcttaccataaaa 51665783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 13160050 - 13160002
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| | |||||||||| ||| || |||||||||||    
T  13160050 ttaagcataccataaaaagaaattattaccgtaatagaaaactgttttt 13160002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 38163035 - 38162955
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38163035 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 38162955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 5694507 - 5694426
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5694507 gggtcctgctaaccggtgcccccggagcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 5694426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 51065748 - 51065829
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51065748 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 51065829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 15227925 - 15227844
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15227925 gggtcttgctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 15227844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 29657957 - 29657876
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29657957 gggtcctgctaaccggtgcccccagggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgttttt 29657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 30294380 - 30294462
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30294380 tgggtcctgctaaccggtgtccccggagcacaggttaagcataccataaaagggaattattaccataaaaagaaactgttttt 30294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 12072062 - 12072143
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  12072062 gggtgctgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgttttt 12072143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 18043348 - 18043267
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  18043348 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgttttt 18043267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 42769990 - 42770071
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  42769990 gggttctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgttttt 42770071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 47010179 - 47010098
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47010179 gggtcctgctaaccggtgcccctggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgttttt 47010098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 48383103 - 48383192
Alignment:
Q  181 atttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| ||||||||||||||||| ||||||| | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48383103 atttttttgggtcctgctaaccagtgcccctgaggcattggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 48383192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 24178460 - 24178544
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  24178460 tttgggtccggctaaccggtgcccccggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgctttt 24178544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 3784713 - 3784794
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  3784713 gggtccggctaaccggtgcccccgggacacgggttaagcataccataaaaggaaattattaccataaaagaaaattgttttt 3784794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 19031815 - 19031896
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| | |||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  19031815 gggtcctgctaaccggtgtctccggggtacgggttaagcatatcataaaaggaaattattaccataaaaggaaactgttttt 19031896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 45449244 - 45449325
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| |||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  45449244 gggtcctgctaaccgatgcccctggggcactggttaaacataccataaaaggcaattattaccataaaaggaaactgctttt 45449325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 9266727 - 9266809
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||  | || |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9266727 tgggtcctgctaaccggtgcttctggagcactggttaagtataccataaaagcgaattattaccataaaaggaaactgttttt 9266809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 19010686 - 19010768
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| ||||||||||  || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  19010686 tgggtcctactaaccggtgttcctggggcactggttaatcataccataaaagggaattattaccataaaaggaaactattttt 19010768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 41730495 - 41730413
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| ||||  | |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41730495 tgggtcctgctaaccagtgcttctggggcacttgttaagcataccataaaagggaattattatcataaaaggaaactgttttt 41730413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 14350279 - 14350358
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  14350279 gggtcctgctaaccggtgcccc-ggggcactggttaagcataccattaa-gggaattattaccataaaaggaaattgttttt 14350358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 13961396 - 13961316
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||  || |||| ||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  13961396 ggtcctgctaaccggtgcccttggagcactggttaagcataccataaaagaaaattattaccataaaatgaaactgttttt 13961316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 38701937 - 38702014
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    |||||||||||||||||| |||||||||||    
T  38701937 gggtcctgctaaccggtgccctcggggcactggttaagcataccataa----gaattattaccataaaagaaaactgttttt 38702014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 17333284 - 17333363
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| ||||||||  |||||||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  17333284 gggtcctgctaaccggtgcctccggggcattggttaag--taccataaaagggaagtattatcataaaaggaaactgttttt 17333363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 30657789 - 30657721
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaa 256  Q
    ||||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||| ||||||    
T  30657789 tgggtcctgctaatcggtgcctccggggtactggttaagcataccataaaagggaattattatcataaa 30657721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 3097842 - 3097764
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| |||||    || ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  3097842 gggtcctgctaaccggtgtccccgt---actggttaagcataccataaaaggaaattattaccataaaagaaaactgttttt 3097764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 29210580 - 29210529
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29210580 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagg 29210529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 23473463 - 23473540
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactg 265  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||  |||||| | ||||||||||||||||||||||||    
T  23473463 tgggtcctgctaaccggtaccctcggagcacaggttaagcatattataaaaagaaattattaccataaaaggaaactg 23473540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 28725904 - 28725977
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||||||| ||||||||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  28725904 tgggtcttgctaaccggtgtccccggggcactggttaagcatacgaaaaaaggaaattcttaccataaaaggaa 28725977  T

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Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 50128172 - 50128253
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||   | ||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  50128172 gggtcctgctaaccggtgtttctgggacactggttaagcataccataaaagagaattattaccataaaatgaaactgctttt 50128253  T

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Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 43286910 - 43286827
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacg--ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| ||||||||  ||||   |||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  43286910 gggtcctgctaaccgatgcccccgaagcacactggttaagcataccataaaagagaattattactataaaaggaaactattttt 43286827  T

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Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 47532668 - 47532744
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||| |||||||||||| |  |||||||  ||||||||||||||||||||||||||||||  |||||||||||    
T  47532668 tttgggtcttgctaaccggtgtcttcggggcattggttaagcataccataaaagggaattattattataaaaggaaa 47532744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 12307077 - 12307022
Alignment:
Q  215 gcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  12307077 gcactggttaagcataccataaaagagaattattaccataaaaggaatctgttttt 12307022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 35985644 - 35985703
Alignment:
Q  212 ggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttc 271  Q
    ||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  35985644 ggggcactggttaagtatactataaatgggaattattaccataaaaggaaactgtttttc 35985703  T

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Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 36446356 - 36446406
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36446356 ggttaaacataccataaaagggaattattactataaaaggaaactgttttt 36446406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 8472914 - 8472995
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||  || |||| ||| ||||||| |||||||||||| |||||||||  |||||| ||||||||||||    
T  8472914 gggtcctgctaaccggtatcctcgggacactggttaagtataccataaaagagaattattattataaaatgaaactgttttt 8472995  T

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Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 45431464 - 45431383
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| ||||||| | | | ||||||| ||||||| ||| |||||||| |||||||||||||||||||||||| |||||    
T  45431464 gggtcctgataaccggagtctctggggcactggttaagtatatcataaaagagaattattaccataaaaggaaactattttt 45431383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 6770519 - 6770442
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||    |||  || ||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  6770519 gggtcctgctaaccggtgc----gggatactggttaagcatatcataaaagggaattattatcataaaatgaaactgttttt 6770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 26228364 - 26228300
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccat 253  Q
    ||||| |||||||||||| |||||| | ||  |||||||||||||||||||||||||||||||||    
T  26228364 gggtcatgctaaccggtgtccccggagtaccagttaagcataccataaaagggaattattaccat 26228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 48071670 - 48071587
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| |||||||  |  || |||| |||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  48071670 tttgggtcctgctgaccggtgttct-ggagcaccggttaagcatactataaaagataattattaccataaaaggaaactgttttt 48071587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 51368810 - 51368866
Alignment:
Q  214 ggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  51368810 ggcactggttaagcataccataaaatggaattattactataaaaggaaactattttt 51368866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 21112681 - 21112732
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  21112681 gggtcctgctaaccggtgccctcggggcactagttaagcataccataaaagg 21112732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 21117423 - 21117474
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  21117423 gggtcctgctaaccggtgccctcggggcacaagttaagcataccataaaagg 21117474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 29683351 - 29683301
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  29683351 ggttaagcataccataaaagtgaattattactataaaatgaaactgttttt 29683301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 30217947 - 30217867
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |||||| | ||||||| | ||||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  30217947 tgggtcctgctaacaggtgcctc-ggggcactg-ttaagcataccataaaaagaaattattaccataaaagaaaactattttt 30217867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 30664173 - 30664239
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||||||||||||| |||||||| |||||||||||| | |||| | |||| |||||||||||||||    
T  30664173 tgctaaccggtgcccacggggcactggttaagcatacaaaaaaaagaaattcttaccataaaaggaa 30664239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 38595751 - 38595824
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||||||||| ||||||||| |||||||||| | | |||||  |||| |||||||||||||||    
T  38595751 tgggtcatgctaaccggtgcctccggggcactggttaagcatgcaaaaaaagaaaattcttaccataaaaggaa 38595824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 10679701 - 10679629
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||||||||||||||||||| |||  ||||||||||| | |||| | |||| |||||||||||||||    
T  10679701 gggtcatgctaaccggtgcccccgggacacctgttaagcatacaaaaaaaagaaatttttaccataaaaggaa 10679629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 23822520 - 23822593
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||||| |||||||||||||||||||||||  |||||||||||| | ||||   |||| |||||||||||||||    
T  23822520 tttgggtcatgctaaccggtgcccccggggcattggttaagcatacaaaaaaa--aaattcttaccataaaaggaa 23822593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 52431761 - 52431697
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcatacc-ataaaagggaattattaccataaaag 258  Q
    |||||||||||| ||| ||||||| ||||||||||||| | |||||| |||||||||||||||||    
T  52431761 tgctaaccggtgtccctggggcactggttaagcataccaaaaaaaggaaattattaccataaaag 52431697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 28482028 - 28481973
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaatta 246  Q
    ||||||| ||||||||||||||  ||| |||||||||||||||||||||| |||||||    
T  28482028 gggtcctactaaccggtgcccc--gggtacgggttaagcataccataaaaaggaatta 28481973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 13961218 - 13961249
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaag 226  Q
    ||||||||||||||||||||||||||||||||    
T  13961218 tgctaaccggtgcccccggggcacgggttaag 13961249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 38335317 - 38335274
Alignment:
Q  227 cataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  38335317 cataccataaaagtgaattattatcataaaagaaaactgttttt 38335274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 52749757 - 52749707
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||||||||| ||||||||||||||||||  ||| |||||||    
T  52749757 ggttaaacataccataaaaaggaattattaccataaaaaaaaattgttttt 52749707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 11796971 - 11797050
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    ||||| |||||||||||| ||  |||||||  |||||| |||||| |||||| | |||||||||||||| |||||| ||||    
T  11796971 gggtcatgctaaccggtgtcct-ggggcactagttaaggataccaaaaaaggaagttattaccataaaacgaaactttttt 11797050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 28726086 - 28726034
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattat 247  Q
    |||||||||||||||||||||||| ||||||| |||  | |||||| ||||||    
T  28726086 tgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattat 28726034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 30486398 - 30486315
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30486398 ttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 30486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 20553117 - 20553036
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20553117 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 20553036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 32360867 - 32360950
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32360867 ttgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 32360950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 31390199 - 31390117
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31390199 tgggtcctgctaatcggtgcccccggagcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 31390117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 22068320 - 22068401
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22068320 gggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 22068401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 27856396 - 27856477
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27856396 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgttttt 27856477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 31438832 - 31438751
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31438832 gggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgttttt 31438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 44588088 - 44588007
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44588088 gggtcctgctaaccggtacccccggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttt 44588007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 4381981 - 4381900
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4381981 gggtcctgctaaccagtgctcccggggcactggttaagcataccataaaatggaattattaccataaaaggaaactgttttt 4381900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 6580373 - 6580294
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6580373 tgggtcctgctaaccg---cccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 6580294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 22887937 - 22887855
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22887937 tgggtcatgctaatcggtgcccccggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgttttt 22887855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 22567788 - 22567715
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22567788 gggtcctgctaaccggtgcccctggagcacgggttaagcataccataaaagagaattattaccataaaaggaaa 22567715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 34442533 - 34442613
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34442533 gggtcctgctaaccgatgcccccggg-cactggttaagcataccataaaagggaattattaccataaaagaaaactgttttt 34442613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 3668113 - 3668194
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||||| |||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  3668113 gggtcttgctaaccggtgccctcggggcactggttaaacatactataaaaggaaattattaccataaaaggaaactgttttt 3668194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 26387064 - 26387145
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  26387064 gggtcctgttaaccggtgcccccaaggcactggttaagcataccataaaagggaattattaccataaaagaaaattgttttt 26387145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 28601152 - 28601071
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| ||| | |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28601152 gggtcctgctaaccggtgctcccagtgcactggttaagcataccataaaagagaattattaccataaaaagaaactgttttt 28601071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 4022480 - 4022558
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    ||||||||||||||||||||||||| ||| |||||| |||| ||||||||| |||||||| ||||||||||||||||||    
T  4022480 ggtcctgctaaccggtgcccccgggacactggttaaacatatcataaaaggaaattattatcataaaaggaaactgttt 4022558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 35851750 - 35851832
Alignment:
Q  189 gggtcctgctaaccggtgcccccgg-ggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  35851750 gggtcctgctaaccggtgccccccgaggcattggttaagcataccataaaagagaattattaccataaaatgaaactgttttt 35851832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 8969407 - 8969488
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| ||||||||||||||||| |||||||  ||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  8969407 gggtactgctaaccggtgccccaggggcactagttaagcatactataaaaggaaattattaccataaaaggaaactgctttt 8969488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 13574053 - 13574110
Alignment:
Q  213 gggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13574053 gggcacgggttaagcataccataaaaggaaattattaccataaaaagaaactgttttt 13574110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 561520 - 561599
Alignment:
Q  191 gtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| |||||| || | |||||||||||||||||| |||||||||  |||||||||||||| ||||    
T  561520 gtcctgctaaccggtgcctccggggtactgattaagcataccataaaagagaattattattataaaaggaaactgatttt 561599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 1859342 - 1859267
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||  ||  |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  1859342 tgctaaccggtgttcctagggcactggttaagcataccataaaagagaattattaccataaaagaaaactgttttt 1859267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 25782840 - 25782914
Alignment:
Q  196 gctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| || ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  25782840 gctaaccgatgtccccgggacactggttaagcataccataaaagggaattattatcataaaagaaaattgttttt 25782914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 38590905 - 38590955
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38590905 ggttaagcataccataaaagggaattattaccataaaagaaaactgttttt 38590955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 31782564 - 31782633
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    |||||| |||||||||||||||||| |||||||||||||||||| | |||||| |||| |||||||||||    
T  31782564 tgggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatttttaccataaaa 31782633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 32860287 - 32860207
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| |||| | || ||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32860287 gggtcctgttaacagctgtccccgggacactggttaagcataccataaaagagaattatta-cataaaaggaaactgttttt 32860207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 5093540 - 5093612
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||| ||||||||||||| |||||||  ||||| |||||||||||||| |||||||| ||||||||||||    
T  5093540 gggtcctgttaaccggtgcccc-ggggcactagttaaacataccataaaaggaaattattatcataaaaggaaa 5093612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 45262097 - 45262024
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||||||||||||||| ||  |||||||||||| | |||| | ||||||||||||||||||||    
T  45262097 tgggtcatgctaaccggtgcccccgggacaaaggttaagcatacaaaaaaaagaaattattaccataaaaggaa 45262024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 2898256 - 2898176
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| ||||| ||| | |||| ||||||||||||| |||||||||  ||| ||| |||||||||||    
T  2898256 ggtcctgctaaccggtgcctccgggacactgattaaacataccataaaagagaattattatgatagaagaaaactgttttt 2898176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 43637343 - 43637269
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| || ||||||||||| |||||  ||||||| |||||||||||||||| |||| |||||||    
T  43637343 tgctaaccggtgcccc-ggagcacgggttaaacatactgtaaaaggaaattattaccataaaaagaaattgttttt 43637269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 11021259 - 11021303
Alignment:
Q  226 gcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    
T  11021259 gcataccataaaagggaattattaccacaaaagaaaactgttttt 11021303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 27584922 - 27584843
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |||  ||||| ||| ||||||| ||||||| || | ||||||||||||||||||||||||| ||||    
T  27584922 ggtcctgctaaccgctgcttccggg-cactggttaagtataccatgaatgagaattattaccataaaaggaaactgctttt 27584843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 19036965 - 19037002
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||| |||||||||||||||||||||||||||||||||    
T  19036965 gggtgctgctaaccggtgcccccggggcacgggttaag 19037002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 26270171 - 26270098
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||||||||| |||||||||  ||||||||||  | |||| | |||| |||||||||||||||    
T  26270171 tgggtcatgctaaccggtgcctccggggcacctgttaagcatataaaaaaaagaaatttttaccataaaaggaa 26270098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 5881374 - 5881326
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||  |||||||| |||||||||||||| |||||    
T  5881374 ttaagcataccataaaagataattattatcataaaaggaaactcttttt 5881326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 10820630 - 10820587
Alignment:
Q  227 cataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||  |||||||||||||||||||||||||||||    
T  10820630 cataccaaaaaagaaaattattaccataaaaggaaactgttttt 10820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 29771610 - 29771568
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcata 230  Q
    |||||| |||||||||||||||| |||||||||||||| ||||    
T  29771610 tgggtcatgctaaccggtgcccctggggcacgggttaaacata 29771568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 5282256 - 5282292
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcatac 231  Q
    |||||||||||||||||||| |||||||||| |||||    
T  5282256 tgctaaccggtgcccccgggacacgggttaaacatac 5282292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 25772264 - 25772224
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    ||||| |||||||||||||||||||||| |||||| |||||    
T  25772264 ttaagtataccataaaagggaattattatcataaagggaaa 25772224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 26891682 - 26891733
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||||||||||||||||||||  | |||  ||||||||||||||||||||    
T  26891682 tgggtcctgctaaccggtgccccc-agacactagttaagcataccataaaagg 26891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 24438664 - 24438582
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24438664 tgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 24438582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 24798400 - 24798484
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24798400 tttgggtcctgctaactggtgcccccggggcactggttaagcatactataaaagggaattattaccataaaaggaaactgttttt 24798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 34333469 - 34333389
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  34333469 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt 34333389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 34606447 - 34606366
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  34606447 gggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgctttt 34606366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 4628755 - 4628673
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4628755 tttgggtcctgctaaccggtgcccctaaggcactggttaagcataccataaaagggaattattaccataaaagtaaactgttt 4628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 5239472 - 5239390
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5239472 tgggtcctgctaaccagtgccccgggggcacaagttaagcataccataaaagggaattattaccataaaaagaaactgttttt 5239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 13064876 - 13064957
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||||||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13064876 gggttctgctaaccggtgcccctagagcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 13064957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 29993486 - 29993560
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  29993486 tgggtcctgctaaccgatgcctccgggacactggttaagcataccataaaagggaattattaccataaaaggaaa 29993560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 18486143 - 18486066
Alignment:
Q  193 cctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| |  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  18486143 cctgctaaccggtgtcttcggggcacgggttaagcataccataaaatgaaattattaccataaaaggaaactgttttt 18486066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 42044294 - 42044374
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  42044294 gggtcatgctaaccggtgcccc-ggggcactggttaaacataccataaaagggaattattaccataaaagaaaactgttttt 42044374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 12218437 - 12218517
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| ||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  12218437 gggtcctgctaaccggtgtccc-ggggcactggttaaacataccataaaagagaattattaccataaaaggaaactattttt 12218517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 45045935 - 45045875
Alignment:
Q  210 ccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45045935 ccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgttttt 45045875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 525063 - 525156
Alignment:
Q  176 ataatatttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||| |||||||||||||||||||||| || || | || |||||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  525063 ataatttttatttgggtcctgctaaccggtgctcc-ggagtactggttaaacatatcataaaagagaattattaccataaaaggaaactgttttt 525156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 47839657 - 47839597
Alignment:
Q  210 ccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  47839657 ccggggcactggttattcataccataaaagggaattattaccataaaaggaaactgttttt 47839597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 23363167 - 23363248
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| |||||    |||||||| |||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  23363167 gggtcctgctaatcggtgttttcggggcactggttaaacataccataaaagagaaatattaccataaaaggaaactgttttt 23363248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 30810841 - 30810760
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| ||||||||| |||| ||||||  |||||| |||||||||||||  ||||||||||||||||| |||||||||||    
T  30810841 gggtcctactaaccggtacccctggggcattggttaaacataccataaaagaaaattattaccataaaagaaaactgttttt 30810760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 47083232 - 47083160
Alignment:
Q  197 ctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||| || |||  |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  47083232 ctaaccggtgcccc-ggagcattggttaaacatatcataaaagggaattattaccataaaaggaaactgttttt 47083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 38128478 - 38128406
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||||||||||||| ||||||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  38128478 gggtcatgctaaccggtgcctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 38128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 28588093 - 28588014
Alignment:
Q  191 gtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| ||  ||||||| |  |||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  28588093 gtcctgctaaccgatgttcccggggtattggttaaacataccataaaagggaattattaccataaaagaaaattgttttt 28588014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 6097524 - 6097451
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||| ||||| |||||||||||||||||||||  | |||||| |||| |||||||||||||||    
T  6097524 tgggtcatgctaaccagtgcctccggggcacgggttaagcatataaaaaaaggaaattcttaccataaaaggaa 6097451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 7689224 - 7689281
Alignment:
Q  213 gggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  7689224 gggcactggttaagtataccataaaagagaattattaccataaaagaaaactgttttt 7689281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 1737160 - 1737085
Alignment:
Q  194 ctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||  ||||||||| |||||| ||||| |||||||    
T  1737160 ctgctaaccggtgcttccggggcactggttaagcataccataaaa-tgaattattatcataaatggaaaatgttttt 1737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 5729531 - 5729463
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaag 258  Q
    ||||||||||||| ||||| ||| ||||| |||||||||| ||||||||| |||||||||| |||||||    
T  5729531 ggtcctgctaacctgtgcctccgaggcactggttaagcatgccataaaagagaattattactataaaag 5729463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 23357711 - 23357791
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||||| ||||| | ||||||||| ||||||||||| |||| ||| ||||||||| |||||| |||||||||||||    
T  23357711 ggtcttgctaatcggtgtctccggggcactggttaagcatatcatagaagagaattattatcataaatggaaactgttttt 23357791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 28262207 - 28262131
Alignment:
Q  194 ctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||  || |||||  |||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  28262207 ctgctgaccggtgcttccagggcattggttaagcataccataaaaaagaattattactataaaaggaaactgttttt 28262131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 11686324 - 11686390
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||||||||||||||| |||||  || ||||||||||| |||||||| |||||||||||||||||    
T  11686324 ggtcctgctaaccggtgcctccgggt-acaggttaagcatatcataaaagagaattattaccataaaa 11686390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 43594067 - 43594117
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  43594067 ggttaagcataccataaaagagaattattatcataagaggaaactgttttt 43594117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 8754617 - 8754666
Alignment:
Q  221 gttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  8754617 gttaagcataccataaaaggaaattattaccataaaacaaaactgttttt 8754666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 46716824 - 46716751
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    ||||||||||||||||   |  ||| |||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  46716824 gggtcctgctaaccgggatcttcggagcaccggttaaacataccataaaagggaattattatcataaaaggaaa 46716751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 257
Target Start/End: Complemental strand, 47657131 - 47657096
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||||||||||||||||||||||||||||||||    
T  47657131 ttaagcataccataaaagggaattattaccataaaa 47657096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 18117305 - 18117248
Alignment:
Q  213 gggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||||||||| | ||||||||| ||||||  |||||||||||    
T  18117305 gggcactggttaagcataccataaaatgaaattattactataaaaaaaaactgttttt 18117248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 29835703 - 29835771
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||| |||||||||||  |||| ||||| | |||||||||||||||||  |||||||||||||||||    
T  29835703 tgggtcccgctaaccggtgttcccgaggcacag-ttaagcataccataaaatagaattattaccataaaa 29835771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 19434679 - 19434608
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||| ||||||||||||||| ||| |||||||||||| | |||||  |||| |||||||||||||||    
T  19434679 gggtcatgctgaccggtgcccccggg-cactggttaagcatacaaaaaaagaaaattcttaccataaaaggaa 19434608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 33636613 - 33636557
Alignment:
Q  214 ggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||||||||||||  |||||||||||||||||  ||||| |||||    
T  33636613 ggcactggttaagcataccataaaatagaattattaccataaaaataaactattttt 33636557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 226
Target Start/End: Complemental strand, 30924171 - 30924140
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaag 226  Q
    ||||||||||||||||||||||||||||||||    
T  30924171 tgctaaccggtgcccccggggcacgggttaag 30924140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 22740011 - 22739929
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||| |||| | |||||  | ||||||||| | ||||   ||||||||||||||||| |||||||||||    
T  22740011 tgggtcatgctaaccggtaccccggaggcactagctaagcatacaaaaaaataaaattattaccataaaagaaaactgttttt 22739929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 34556892 - 34556959
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaag 258  Q
    ||||| ||||||||||||||||  |||||| |||||||||||| | |||||| |||| ||||| ||||||    
T  34556892 gggtcatgctaaccggtgcccc--gggcactggttaagcatacaaaaaaaggaaattcttaccctaaaag 34556959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 37674106 - 37674153
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaa 238  Q
    ||||||||||||||||||||||  || ||| |||||||||||||||||||    
T  37674106 gggtcctgctaaccggtgcccc--ggacactggttaagcataccataaaa 37674153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 18220691 - 18220752
Alignment:
Q  209 cccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||| | ||||| |||||| |||||| | ||||||||||||||| ||||| |||||    
T  18220691 cccggggcaccgattaaggataccaaaaaaggaatttattaccataaaagaaaactattttt 18220752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 36786094 - 36786057
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  36786094 gggtgctgctaaccggtgcccccggggcactggttaag 36786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 32805701 - 32805653
Alignment:
Q  213 gggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  32805701 gggcaccggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 32805653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 32929508 - 32929589
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32929508 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 32929589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 392282 - 392201
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  392282 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgttttt 392201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 23402324 - 23402243
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23402324 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgttttt 23402243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 3515953 - 3515871
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3515953 tgggtcctgctaaccggtgcccctggggcacaggttaaacataccataaaagggaattattaccataaaaggaaactgttttt 3515871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 4215881 - 4215800
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4215881 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgttttt 4215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 32985193 - 32985274
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32985193 gggttctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgttttt 32985274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 27433678 - 27433597
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  27433678 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactattttt 27433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 12145116 - 12145198
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  12145116 tgggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattattatcataaaaggaaactgttttt 12145198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 18276612 - 18276696
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcata---ccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||| ||||||| |||||||||||   |||||||||| |||||||||||||||||||||||||||||    
T  18276612 gggtcctgctaaccggtgccccaggggcactggttaagcataataccataaaaggaaattattaccataaaaggaaactgttttt 18276696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 35044086 - 35043994
Alignment:
Q  176 ataatatttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| |||||||| || ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  35044086 ataatattt-tttgggtcatgttaaccggtgcccc-ggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgttttt 35043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 2581138 - 2581065
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    ||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  2581138 gggtcctgctaaccggtgctcccggggtattggttaagcataccataaaagggaattattaccataaaaggaaa 2581065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 26467124 - 26467205
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||||||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  26467124 gggtcatgctaaccggtgcctccggggcactggttagacataccataaaagggaattattaccataaaaggaaactattttt 26467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 7851165 - 7851240
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| | |  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7851165 tgctaaccggtgtctctagggcacgagttaagcataccataaaagggaattattaccataaaaggaaactgttttt 7851240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 1391175 - 1391259
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||  || ||  ||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  1391175 tttgggtcctgctaaccggtgttcctggaacactggttaagcataccataaaagggaattattatcataaaagaaaactgttttt 1391259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 2350832 - 2350757
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||| | |||||| || ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  2350832 tgctaaccggtgtctccggggtactggttaagcatatcataaaagggaattattaccataaaaggaaactattttt 2350757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 29451138 - 29451192
Alignment:
Q  212 ggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgt 266  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29451138 ggggcacgggttaagcataccataaaagggaattattatcataaaaggaaactgt 29451192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 3026013 - 3026090
Alignment:
Q  193 cctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| |||| ||| | |||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  3026013 cctgctaaccggtgccctcgggacactgattaagcataccataaaagagaattattacgataaaagaaaactgttttt 3026090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 12525905 - 12525828
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgt 266  Q
    |||||||||||||||||  ||| |||||||  |||||||||| |||||||||||||||||||||||||| ||||||||    
T  12525905 gggtcctgctaaccggtatccctggggcactagttaagcatatcataaaagggaattattaccataaaatgaaactgt 12525828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 5323573 - 5323505
Alignment:
Q  202 cggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| || |||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  5323573 cggtgcctccagggcaccggttacgcataccataaaagggaattattaccataaaaggaaattgttttt 5323505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 34706907 - 34706835
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||||||||||||||||||||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  34706907 gggtcttgctaaccggtgcccccggggcactggttaagcatacgaaaaaaggaaattcttaccataaaaggaa 34706835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 13416960 - 13417040
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||| |||||||||||    
T  13416960 gggtccagctaaccggtgcctccggg-cactggttaagcatattataaaagagaattattaccataaaagaaaactgttttt 13417040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 25165413 - 25165494
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| ||| |||||  ||||||||||| | |||||| ||||||||| |||||||| |||||||||||    
T  25165413 gggtcctgctaaccggtgctcccagggcattggttaagcatatcgtaaaagagaattattatcataaaagaaaactgttttt 25165494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 34477569 - 34477620
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  34477569 gggtcctgctaaccggtacctccggggcacgggttaagcataccataaaagg 34477620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 1840271 - 1840328
Alignment:
Q  213 gggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  1840271 gggcactggttaaacatatcataaaagggaattattaccatgaaaggaaactgttttt 1840328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 11115117 - 11115178
Alignment:
Q  209 cccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||| |||||    
T  11115117 cccggggcactggttaaacatatcataaaagggaattattaccataaaagaaaactattttt 11115178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 22417360 - 22417303
Alignment:
Q  208 ccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactg 265  Q
    ||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||    
T  22417360 ccccggggcactgattaagcataccataaaagagaattattagcataaaaggaaactg 22417303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 28225406 - 28225325
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||| |||||  |||| ||| | ||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  28225406 gggtcctactaacctgtgccttcgggtcactgtttaaggataccataaaagggaattattaccataaaagaaaattgttttt 28225325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 29978417 - 29978337
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||  || ||| | | ||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  29978417 gggtcctgctaaccggtgttccaggg-cgctggttaagcatatcataaaagggaattattaccataaaattaaactgttttt 29978337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 961167 - 961116
Alignment:
Q  217 acgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  961167 acgggttaagcataccataaaagagaattattatcataaaaggaaattgttt 961116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 34712131 - 34712197
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||||||||||||||||||||||  ||||||||||| | ||| || |||| |||||||||||||||    
T  34712131 tgctaaccggtgcccccggggcactagttaagcatacaaaaaatggaaattcttaccataaaaggaa 34712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 20898115 - 20898064
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  20898115 tgggtccggctaaccggtgcccc-ggggcacaggttaagcataccataaaagg 20898064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 21878353 - 21878428
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||  || ||||||| |||||| |||||      |||||||||||||||||||| ||||||||||||    
T  21878353 gggtcctgctaaccggtgttcctggggcactggttaaacatac------agggaattattaccataaaaagaaactgttttt 21878428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 31280502 - 31280426
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||| || ||||||  |||||||||||||||     |||||||||| |||||||||||| ||||||    
T  31280502 tgggtcctgctaaccggtgcctcc-gggcactcgttaagcataccata-----gaattattactataaaaggaaaccgttttt 31280426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 34851849 - 34851922
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||||||| ||||| | ||||  ||| |||||||||||  ||||||| |||||||||| |||||||||||    
T  34851849 gggtcctgctaatcggtgtcaccggaacactggttaagcatattataaaagagaattattactataaaaggaaa 34851922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 1127994 - 1127934
Alignment:
Q  197 ctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||||||||| |||||||| |||||||||||| | |||||  |||| |||||||||||    
T  1127994 ctaaccggtgccctcggggcactggttaagcatacaaaaaaagaaaattcttaccataaaa 1127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 28564388 - 28564340
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||| |||||| | |||||||||||||||||||||||||||    
T  28564388 ttaaggataccaaaaaaggaatttattaccataaaaggaaactgttttt 28564340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 34494338 - 34494276
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattacc 251  Q
    |||| ||||||||||||||| |||||| |  |||||||||||| | ||||| |||||||||||    
T  34494338 gggttctgctaaccggtgcctccggggtattggttaagcatacaacaaaagagaattattacc 34494276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 8701380 - 8701343
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  8701380 gggtgctgctaaccggtgcccccggggcactggttaag 8701343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 9661128 - 9661091
Alignment:
Q  233 ataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  9661128 ataaaatggaattattaccataaaaggaaactgctttt 9661091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 6110 - 6191
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  6110 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaggggattattaccataaaaggaaactgttttt 6191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 33108673 - 33108754
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33108673 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaaggaattattaccataaaaggaaactgttttt 33108754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 4268809 - 4268903
Alignment:
Q  176 ataatatttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| | |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  4268809 ataatatttttatgggtcctgctaaccggtgccctcggggcactggttaatcataccataaaagggaattattaccataaaaagaaactgttttt 4268903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 7769124 - 7769043
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  7769124 gggtcctgctaaccggtgcccccggggcacgggttaagtatgccataaaagagaattattaccataaaaggaaactgttttt 7769043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 29591375 - 29591294
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29591375 gggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgttttt 29591294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 16821038 - 16820962
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactg 265  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16821038 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactg 16820962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 16536234 - 16536153
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  16536234 gggtcctgctaaccggtgcccccggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgttttt 16536153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 18067879 - 18067960
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  18067879 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactattttt 18067960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 6164280 - 6164198
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||| || ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6164280 tgggtcctgctaaccggtgtcctcggggtactggttaagcataccataaaagagaattattaccataaaaggaaactgttttt 6164198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 12356431 - 12356349
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12356431 tgggtcctgctaaccggtgcccccggaacactggttaagcataccataaaagagaattattatcataaaaggaaactgttttt 12356349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 4089328 - 4089247
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| |||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  4089328 gggtcctgctaactggtgcccctggggcactggttaaacataccataaaagagaattattaccataaaaggaaactgttttt 4089247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 50619271 - 50619191
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50619271 gggtcccgctaaccggtgcccctggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 50619191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 789527 - 789611
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| ||||||||||||| | |||  || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  789527 tttgggtcccgctaaccggtgcctctgggctactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 43944693 - 43944612
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| ||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43944693 tgggtcttgctaaccggtgccctcggg-cactggttaagcataccatacaagggaattattaccataaaaggaaactgttttt 43944612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 54897495 - 54897413
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  54897495 tgggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgttttt 54897413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 36395285 - 36395204
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  36395285 gggtcctgctaactggtgcccccagggcactggttaagcataccataaaagggaattattatcataaaagaaaactgctttt 36395204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 43202384 - 43202464
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  43202384 gggtcctgctaaccggtgcccccggg-cactggttaagcttaccataaaagagaattattaccataaaagaaaactgttttt 43202464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 32217230 - 32217150
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  32217230 gggtcctgttaaccggtgcctccggggcacaggttaagcataccataaaagggaattattatcataaaa-aaaactgttttt 32217150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 55882868 - 55882788
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||| |||||||||||    
T  55882868 gggtcctactaaccggtgcccccgaggcacgggttaagtataccataaaagtgaatt-ttaccataaaagaaaactgttttt 55882788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 3783498 - 3783582
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggt---taagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| |||||||||| ||||||||||  ||   |||||||||||||||||||||||||||||||||||| |||||||||||    
T  3783498 gggtcctgttaaccggtgctcccggggcactagtacttaagcataccataaaagggaattattaccataaaagaaaactgttttt 3783582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 39877246 - 39877330
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagc--ataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||| ||||| ||||||||| ||||||||  |||||||||||| |||||||||| |||||| ||||||||||||    
T  39877246 tgggtcctgctaacccgtgcctccggggcactggttaagcatataccataaaagagaattattactataaaatgaaactgttttt 39877330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 5091611 - 5091689
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    |||||||||||||||||||| |||||  ||| |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5091611 tgggtcctgctaaccggtgctcccgga-cactggttaagcatac-ataaaagggaattattactataaaaggaaactgttt 5091689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 19503102 - 19503186
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||| |||||||| |||||||  || ||  |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19503102 tttgagtcccgctaaccgatgcccccaaggtactagttaagcataccataaaagggaattattacaataaaaggaaactgttttt 19503186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 15186424 - 15186348
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| ||||||||||||||||||||| |||||      |||||||| |||||||||||||||||||||||||||||||    
T  15186424 tgggtcctgttaaccggtgcccccggggcactggtta------ccataaaatggaattattaccataaaaggaaactgttttt 15186348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 52533815 - 52533865
Alignment:
Q  219 gggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  52533815 gggttaaacataccataaaagggaattattaccataaaaggaaactgtttt 52533865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 47231881 - 47231953
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||  |||||| |  |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  47231881 taaccggtgcttccggggtattggttaaacataccataaaagggaattattatcataaaaggaaactgttttt 47231953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 54054715 - 54054659
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaatt 245  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  54054715 gggtcctgccaaccggtgcccccggggcactggttaagcataccataaaaggaaatt 54054659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 28120058 - 28120121
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||||||||||||||||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  28120058 taaccggtgcccccggggcacaggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 28120121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 292295 - 292229
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    |||||||||||||| |||||||||||||||||||| | | |||||| |||| |||||||||||||||    
T  292295 tgctaaccggtgcctccggggcacgggttaagcatgcaaaaaaaggaaatttttaccataaaaggaa 292229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 39844086 - 39844012
Alignment:
Q  191 gtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||| |||||| ||||||    ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  39844086 gtcctgctaaccgatgcccc-ggggca----ttaagcataccctaaaaaggaattattaccataaaaggaaactgttttt 39844012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 4220380 - 4220300
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||||  ||| ||||  ||||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  4220380 gggtcatgctaaccggtgcctacggagcacatgttaagcataccataaaagggaattatta-cataaaagaaaattgttttt 4220300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 37988121 - 37988040
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||||||||   ||||| |  |||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  37988121 gggtcctactaaccggtgctttcgggggattggttaagcatactataaaagagaattattacaataaaaggaaactgttttt 37988040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 28119906 - 28119978
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| |||||||||||| | ||||||||| |||||||||||| | |||||| |||| |||||||||||||||    
T  28119906 gggtcatgctaaccggtgtctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaa 28119978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 30387167 - 30387215
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  30387167 ttaagcatatcataaaaaggaattattaccataaaaggaaactgttttt 30387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 37402759 - 37402830
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||| ||||||||||||||| |||||||| ||||||||||| || |||||| |||| |||||||||||||||    
T  37402759 gggtcatgctaaccggtgccctcggggcactggttaagcata-caaaaaaggaaattcttaccataaaaggaa 37402830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 28755803 - 28755727
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    ||||||||||||||||| | | |||||| ||||||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  28755803 ggtcctgctaaccggtgtctc-ggggcatgggttaagcatactataaaa-ggaagtattatcataaaaggaaactgttt 28755727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 30154162 - 30154244
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| ||    |||||||| ||||||||| |||||||||| ||||||||| |||| ||||||| |||||||    
T  30154162 tgggtcctgctaaccgatgttttcggggcactggttaagcacaccataaaagagaattattatcatataaggaaattgttttt 30154244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 31517351 - 31517284
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||| |||| |||||||||| || ||| |||||||||||||||| ||| |||||||||||||||||    
T  31517351 gggtccttctaatcggtgcccccagg-cactggttaagcataccatataagagaattattaccataaaa 31517284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 31680484 - 31680544
Alignment:
Q  210 ccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||| |||| |||||||  |||||||||||||||||||||| |||||||    
T  31680484 ccgggacacgggttaaacatatcataaaaatgaattattaccataaaaggaaattgttttt 31680544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 50603414 - 50603346
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||||||||| ||||  | ||||| || |||||||||||||||||||| ||||||||| |||||||    
T  50603414 gggtcctgctaactggtgttctcggggtactggttaagcataccataaaagagaattattatcataaaa 50603346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 16572488 - 16572555
Alignment:
Q  190 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    |||| |||||||||||||||||||||||| | ||||| |||| | |||||| |||| |||||||||||    
T  16572488 ggtcatgctaaccggtgcccccggggcactgattaagtatacaaaaaaaggaaattcttaccataaaa 16572555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 46149111 - 46149044
Alignment:
Q  203 ggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| || | ||| |||||| ||||||||||||| ||||||||||||||||| |||| |||||||    
T  46149111 ggtgccctcgagacactggttaaacataccataaaagagaattattaccataaaaagaaattgttttt 46149044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 53655887 - 53655946
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaa 257  Q
    ||||||||||| ||| ||||| | ||||||||||||||||| | ||||||||||||||||    
T  53655887 taaccggtgcctccgaggcactgattaagcataccataaaatgaaattattaccataaaa 53655946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 54655879 - 54655957
Alignment:
Q  191 gtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||| ||| ||| ||||||||||| ||||| || ||||||||| | |||||| ||| |||||||    
T  54655879 gtcctgctaaccggtgcccc-gggacactggttaagcatatcataagagagaattattatcctaaaagaaaattgttttt 54655957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 5518885 - 5518954
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaag 258  Q
    |||||| |||||||| ||||||||||||||| ||||||| || ||| |||||  |||||||||||||||||    
T  5518885 tgggtcatgctaaccagtgcccccggggcacaggttaaggatgcca-aaaagaaaattattaccataaaag 5518954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 46688229 - 46688275
Alignment:
Q  194 ctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||    
T  46688229 ctgctaaccggtgcccccagagcactggttaagcataccataaaagg 46688275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 54945779 - 54945859
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||||  || || |||| ||||||| ||||||||||| ||||||| |||||||||| |||| |||||||    
T  54945779 tgggtcctgctaaccggtgttcc-ggagcactggttaagtataccataaaaaggaatta-taccataaaacgaaattgttttt 54945859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 32202481 - 32202561
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||| |||| |||||| | ||| ||  | ||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  32202481 gggtcctgttaactggtgcctctgggacattgattaagcatatcataaaagg-aattattatcataaaaggaaactgttttt 32202561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 53003956 - 53004029
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    |||||||||||||||||| ||| ||| ||| | ||||||||| |||||||| |||||||||   ||||||||||    
T  53003956 gggtcctgctaaccggtgtcccggggacactgattaagcatatcataaaagagaattattattttaaaaggaaa 53004029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 24679676 - 24679723
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  24679676 ttaagcataccataaaagagaattattaccat-aaaggaaattgttttt 24679723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 226
Target Start/End: Complemental strand, 789710 - 789679
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaag 226  Q
    ||||||||||||||||||||||||||||||||    
T  789710 tgctaaccggtgcccccggggcacgggttaag 789679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 6493708 - 6493771
Alignment:
Q  198 taaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaa 261  Q
    ||||||||||| |||||||| | ||||||||||| | |||||  |||| |||||||||||||||    
T  6493708 taaccggtgcctccggggcatgtgttaagcatacaaaaaaagaaaattcttaccataaaaggaa 6493771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 42898757 - 42898827
Alignment:
Q  202 cggtgcccccggggcacgggttaagcataccataaaagggaattattac--cataaaaggaaactgttttt 270  Q
    ||||| ||||||| ||  |||||||||||||||||||| ||||||||||  ||||||| |||||| |||||    
T  42898757 cggtgtccccgggacattggttaagcataccataaaagagaattattaccacataaaaagaaactattttt 42898827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 8749796 - 8749838
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcatac 231  Q
    ||||| |||||||||||||||  ||||||||||||||||||||    
T  8749796 gggtcatgctaaccggtgcccttggggcacgggttaagcatac 8749838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 10426104 - 10426066
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaag 226  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  10426104 tgggtgctgctaaccggtgcccccggggcactggttaag 10426066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 41265620 - 41265563
Alignment:
Q  213 gggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||| ||||||| |||||  ||||||||| ||||||| |||||||||||    
T  41265620 gggcactggttaaacataccaaaaaagaaaattattacaataaaagaaaactgttttt 41265563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 10110007 - 10110068
Alignment:
Q  195 tgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaag 258  Q
    ||||||||||||||||  ||||||||||||||||||| | |||||   ||| ||||||||||||    
T  10110007 tgctaaccggtgcccc--gggcacgggttaagcatacaaaaaaagaagattcttaccataaaag 10110068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 258
Target Start/End: Original strand, 39877370 - 39877398
Alignment:
Q  230 accataaaagggaattattaccataaaag 258  Q
    |||||||||||||||||||||||||||||    
T  39877370 accataaaagggaattattaccataaaag 39877398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 10897 - 10815
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10897 tgggtcctgctaaccgctgcccccgaggcactggttaagcataccataaatgggaattattaccataaaaggaaactgttttt 10815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 15083 - 15001
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15083 tgggtcctgttaaccagtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 15001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 53685 - 53766
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  53685 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactattttt 53766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 116390 - 116311
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttt 268  Q
    |||| ||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  116390 gggtactgctaaccggtatccctggggcacgggttaaacataccataaaagggaattattatcataaaaggaaactgttt 116311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 68288 - 68371
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| ||||  ||||| || |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  68288 ttgggtcctgctaaccgatgccttcggggtactggttaagcataccataaaagggaattattaccttaaaaggaaactgatttt 68371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 41106 - 41024
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||||||| |||||||| | ||||| ||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  41106 tgggtcctgccaaccggtgtctccgggacactggttaagcatatcataaaaggaaattattatcataaaaggaaactgttttt 41024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 23147 - 23066
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||| |||||||||||| ||  ||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  23147 gggtcttgctaaccggtgtccttggggcactggttaaacataccataaaagagaattattaacataaaaggaaactgttttt 23066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 234039 - 233958
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||||||||||| | || |||||| |||||||||||||| |||||||  ||||||||||||||| ||||    
T  234039 gggtcctgctaaccggtgcccccggagtaccggttaaacataccataaaaggaaattattttcataaaaggaaactgctttt 233958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 95585 - 95665
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttt 269  Q
    ||||||| |||||||| ||||| |||  || |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  95585 gggtcctcctaaccggagcccctgggataccggttaaacataccataaaagggaattattaccataaaagaaaactgtttt 95665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 53344 - 53417
Alignment:
Q  176 ataatatttctttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattatta 249  Q
    |||| |||| ||| ||||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||    
T  53344 ataaaatttgtttcggtcctgctaaccggtgcctccggggcactagttaagcataccataaaagagaattatta 53417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 7916 - 7967
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  7916 gggtcctgctaaccggtacctccggggcacgggttaagcataccataaaagg 7967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 7455 - 7404
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagg 240  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  7455 gggtcctgctaaccggtacctccggggcacgggttaagcataccataaaagg 7404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 25904 - 25823
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| |||||| |||||  |||| ||| | ||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  25904 gggtcctactaacctgtgccttcgggtcactgtttaaggataccataaaagggaattattaccataaaagaaaattgttttt 25823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 1004 - 938
Alignment:
Q  196 gctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaa 262  Q
    ||||||||||| ||   |||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  1004 gctaaccggtgtccttagggcactggttaagcataccataaaagagaattattactataaaaggaaa 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 69411 - 69331
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||| ||||||||||| |||| ||||| ||||||||||||||||||| | |||||||||| |||||  |||||| ||||    
T  69411 gggtccttctaaccggtgctcccgaggcactggttaagcataccataaaa-gaaattattaccttaaaaaaaaactgctttt 69331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 865 - 783
Alignment:
Q  187 ttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||| |||||||||||||| |||  |   ||||||||||||||||||| ||||||| |||||||||| |||| ||||||    
T  865 ttgggtcctactaaccggtgcccc-gggctattagttaagcataccataaaagagaattatcaccataaaagaaaacagttttt 783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 17502 - 17552
Alignment:
Q  220 ggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  17502 ggttaaacataccataaaaaggaattattatcataaaagaaaactgttttt 17552  T

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Target: scaffold0206 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 10987 - 11038
Alignment:
Q  186 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaa 238  Q
    |||||||||||||||| ||||||||| ||||||  ||||||||||||||||||    
T  10987 tttgggtcctgctaactggtgccccc-gggcaccagttaagcataccataaaa 11038  T

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Target: scaffold0263 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 19584 - 19666
Alignment:
Q  188 tgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| |   ||||| ||| | |||| |||| |||||||| ||| ||||| | ||||||||||||||||||    
T  19584 tgggtcctgctaaccggagtttccgggacactgattaatcatatcataaaagagaactattatcgtaaaaggaaactgttttt 19666  T

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Target: scaffold1266 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 445 - 397
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    |||| |||| |||||||| ||||||||||| || |||||||||||||||    
T  445 ttaatcatatcataaaagagaattattaccgtagaaggaaactgttttt 397  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 146938 - 146986
Alignment:
Q  222 ttaagcataccataaaagggaattattaccataaaaggaaactgttttt 270  Q
    ||||||||||||||||| | |||||||||| ||| || |||||||||||    
T  146938 ttaagcataccataaaaagaaattattaccgtaatagaaaactgttttt 146986  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 508987 - 509058
Alignment:
Q  189 gggtcctgctaaccggtgcccccggggcacgggttaagcatac--cataaaagggaattattaccataaaag 258  Q
    ||||| |||||||||||||| ||||||||| | ||||||||||   | |||||| |||| ||||||||||||    
T  508987 gggtcatgctaaccggtgcctccggggcaccgtttaagcatacaaaaaaaaaggaaatttttaccataaaag 509058  T

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