View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8870_low_5 (Length: 321)
Name: NF8870_low_5
Description: NF8870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8870_low_5 |
 | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold1870 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 156; Significance: 7e-83; HSPs: 51)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 28787527 - 28787233
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| || |
|
|
| T |
28787527 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcataagaaactgcacgatttaaaacgtcttcataacttgaaggtac |
28787428 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||| |||||||| |||||||||||||||||||| | ||||| ||||||| || | ||||||||||||||| ||||| |
|
|
| T |
28787427 |
tttgttattcttaaaagccatccatctcaacaactcaagagcttctgtcccatacagccctttcacttcatgtgtactttctatcccatgacttcttagt |
28787328 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28787327 |
aagtgtttgtctcgagtcgtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgcttcatatcgtcaac |
28787233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 28793648 - 28793354
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| || |
|
|
| T |
28793648 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcatacgaaactgcacgatttaaaacgtcttcataacttgaaggtac |
28793549 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||| |||||||| |||||||||||||||||||| | ||||| ||||||| || | ||||||||||||||| ||||| |
|
|
| T |
28793548 |
tttgttattcttaaaagccatccatctcaacaactcaagagcttctgtcccatacagccctttcacttcatgtgtactttctatcccatgacttcttagt |
28793449 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28793448 |
aagtgtttgtctcgagtcgtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgcttcatatcgtcaac |
28793354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 26803735 - 26803441
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||||||| || |
|
|
| T |
26803735 |
tctttccaaacaagttggaacccactatctctaaaactaagggaagacctgaagcatatgaaactgcacgatttaaaatgtcttcataacttgaaggtac |
26803636 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||||||||||||||| || || | |||| |||||| ||||||| |||||| ||| ||| |
|
|
| T |
26803635 |
tttgttatttttaaaagccatccacctcaacaattcaagagcttctgtcccatacaacccctctactgcatatgttctttctatatcatgactggtcagt |
26803536 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|| ||||| |||||||||||||||||||| ||||||||| ||||| |||||| ||||||||| ||||||||||||||||| | |||||||||||| |
|
|
| T |
26803535 |
aaatgtttgtctcgagtggtaatgatgaccctgcttccatggccaaaccaatcaggtcctccagccaaagcatgtagttgctccatatcgtcaac |
26803441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 292
Target Start/End: Original strand, 27717403 - 27717686
Alignment:
| Q |
12 |
aagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatt---tcctt |
108 |
Q |
| |
|
||||| ||||||| |||||||| |||||| |||||||| |||||||||| ||||||||| |||||||| |||| ||| |||||||||||| | || |
|
|
| T |
27717403 |
aagttagaacccactatttctataactaacggaaggccagaagcatatgcaactgcacggtttaaaatctcttcgtaacctgaaggaacattgtcacttt |
27717502 |
T |
|
| Q |
109 |
taaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatc |
208 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || |||| |||||||| | ||| ||||||||||||||||||||||||||| || |
|
|
| T |
27717503 |
taaaagccatccacctcaacaattcaagagcttctgtcccatacaacccttctacttcatgcatactttttatcccatgacaggttagtaagtgtttgtc |
27717602 |
T |
|
| Q |
209 |
tcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
27717603 |
tcgagtggtaatgatgactttgcttccacggccgaaccaatcaggtcctccagccaaagcatgtagttgcttcatattgtcaac |
27717686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 26647757 - 26647498
Alignment:
| Q |
12 |
aagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatt--tcct-t |
108 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||| |||||| || || || | | | |
|
|
| T |
26647757 |
aagttggaacccactatttctaaaactaagggaaggcctgaagcatatgaaactgcacggtttaaaacgtcttcataacttggcggtactttgttattct |
26647658 |
T |
|
| Q |
109 |
taaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatc |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26647657 |
taaacgccatccacctcaacaattcaagagcttctgtcccatatagccctcttactgcatatgttctttctatcccatgacaggttagtaagtgtttatc |
26647558 |
T |
|
| Q |
209 |
tcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
||| ||||| |||||||||||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
26647557 |
tcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagc |
26647498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 26753725 - 26753466
Alignment:
| Q |
12 |
aagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatt--tcct-t |
108 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||| |||||| || || || | | | |
|
|
| T |
26753725 |
aagttggaacccactatttctaaaactaagggaaggcctgaagcatatgaaactgcacggtttaaaacgtcttcataacttggcggtactttgttattct |
26753626 |
T |
|
| Q |
109 |
taaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatc |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26753625 |
taaacgccatccacctcaacaattcaagagcttctgtcccatatagccctcttactgcatatgttctttctatcccatgacaggttagtaagtgtttatc |
26753526 |
T |
|
| Q |
209 |
tcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
||| ||||| |||||||||||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
26753525 |
tcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagc |
26753466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 26885356 - 26885089
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||| | ||||||| |
|
|
| T |
26885356 |
tctttccaaacaagttggaacccactatttctataactaaaggaaggcccgaagcatatgaaactgcacggtttaaaatctcttcataacctaaaggaac |
26885257 |
T |
|
| Q |
101 |
atttcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaag |
200 |
Q |
| |
|
|| ||||||| |||| ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||| | |||| || ||| || ||||||||| |
|
|
| T |
26885256 |
tttgtctttaaaggccagccacctcaacaattcaaaagcttctttcccatatatcccttctacttcatatgttctatctaccctatggcacgttagtaag |
26885157 |
T |
|
| Q |
201 |
tgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| ||| |||||| | ||||||| |||||||| |
|
|
| T |
26885156 |
tgtttatcacgagtggtaatgatgaccctgcttccacgaccaaaccaatcaagtcctccagccaaagc |
26885089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 27610013 - 27610307
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| |||||| |||||||| |||||||||| ||| ||||| |||||||| |||| ||| ||||||||| |
|
|
| T |
27610013 |
tctttccaaacaagttagaacccactatttctataactaacggaaggccagaagcatatgcaacagcacggtttaaaatctcttcgtaacctgaaggaac |
27610112 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
||| | |||||| |||||||||||||||||||||||||||||||||||||| | |||| |||| || | ||| |||||||||||||||||| |
|
|
| T |
27610113 |
attgtcacttttaaaagccatccacctcaacaattcaagagcttctgtcccatacagcccttccactttatgcatactttttatcccatgacaggttagc |
27610212 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| |||||||||| |||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
27610213 |
aagtgtttgtctcgagtggcaatgatgactttgcttccacggccgaaccaatcaggtcctccagccaaagcatgtagttgcttcatattgtcaac |
27610307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 31285848 - 31285554
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| || ||||| |||||| |||||||| |||| ||||| ||||||||| ||||||||| |||| ||| ||||||||| |
|
|
| T |
31285848 |
tctttccaaacaagtttgaacccactacttctataactaatggaaggccagaagaatatgcaactgcacggtttaaaatgtcttcgtaacctgaaggaac |
31285749 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||| ||||||||||||||||| ||||||| || |||| |||| ||| || | ||| ||||||||||| ||||| |
|
|
| T |
31285748 |
tttgtcacttttaaaagccatccaccttaacaattcaagagcttcagtcccattcaacccttctactgcatgtgtactttttatcccatgactacttagt |
31285649 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
31285648 |
aagtgtttgtctcgagtggtaatgatgactctgcttccacggccgaaccaatcaagtcctccagccaaagcatgcagttgattcatattgtcaac |
31285554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 26657251 - 26656984
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||| ||| || ||||| |||||||||||| || |||||||||||||||||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
26657251 |
tctttccaaacaagtttgaagccactacttctataactaagggaagtcctgaagcatatgaaactgcacggcttaaaatttcttcataacctgaaggaac |
26657152 |
T |
|
| Q |
101 |
atttcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaag |
200 |
Q |
| |
|
||| || |||| |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||| |||||||||| |||||| |||| ||| |
|
|
| T |
26657151 |
attgtctctaaaagccatccatctcaacaattcaagtgcttctgtcccatatagcccttttacggcatatgttatttctatcccgtgacagtttagcaag |
26657052 |
T |
|
| Q |
201 |
tgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||||| | |||||||||||||||| |
|
|
| T |
26657051 |
tgtttatctctagtggtaatgatgactctgcttccacaaccgaaccaatcaagtcctcctgccaaagc |
26656984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 26763222 - 26762955
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||| ||| || ||||| |||||||||||| || |||||||||||||||||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
26763222 |
tctttccaaacaagtttgaagccactacttctataactaagggaagtcctgaagcatatgaaactgcacggcttaaaatttcttcataacctgaaggaac |
26763123 |
T |
|
| Q |
101 |
atttcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaag |
200 |
Q |
| |
|
||| || |||| |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||| |||||||||| |||||| |||| ||| |
|
|
| T |
26763122 |
attgtctctaaaagccatccatctcaacaattcaagtgcttctgtcccatatagcccttttacggcatatgttatttctatcccgtgacagtttagcaag |
26763023 |
T |
|
| Q |
201 |
tgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||||| | |||||||||||||||| |
|
|
| T |
26763022 |
tgtttatctctagtggtaatgatgactctgcttccacaaccgaaccaatcaagtcctcctgccaaagc |
26762955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 27705147 - 27705398
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||||||||| |||||||| |||||||||| ||||||||| ||||||||| ||||| ||| ||||||||| |
|
|
| T |
27705147 |
tcttgccaaacaagttagaacccattacttctaaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaac |
27705246 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| |||||||||||||||||||||||||| ||| |||||| || |||| |||| ||||| |||||||||| |||| ||| |||| |
|
|
| T |
27705247 |
gttgtcatttttaaaagccatccacctcaacaattcaagagcatctatcccattcaacccttctactggatatgttttttctatcctatgagaggctagt |
27705346 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaat |
249 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||||||| ||||| |||||| |
|
|
| T |
27705347 |
aagtgtttatttcgagtggtgatgataactctgcttccagggccaaaccaat |
27705398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 27426505 - 27426799
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| ||||| |||||||| |||||||| | |||| ||||||| ||||| |||| ||||||||||||| |
|
|
| T |
27426505 |
tctttccaaacaagttagaacccactatttctataactaccggaaggccagaagcataagcaactacacgattcaaaatcttttcataacttgaaggaac |
27426604 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||| ||||||||| |||| |
|
|
| T |
27426605 |
tttgtcatttttaaaagccatccacctcaacaattcaagagcttctgtcacattcaacccttttactgcatatgttttttctatctcatgacaggctagt |
27426704 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| ||||||| | || |||||| | |||||| |||||||||| ||||| ||||||| |||||| |
|
|
| T |
27426705 |
aagtgtttatctcgggtggtgatgatgactcggcttccaggaccgaaccaatcaactcctccagccaaagcattcagttgcttcatattgtcaac |
27426799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 27680239 - 27679945
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| || |||||||||||| |||||||| ||||||||| ||||||||| ||||||||| |||| ||| ||||||||| |
|
|
| T |
27680239 |
tctttccaaacaagttagaacccactacttctaaaactaacggaaggccaaaagcatatgcaactgcacggtttaaaatgtcttcgtaacctgaaggaac |
27680140 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||||||||||||||| ||| || |||| |||| ||| || | ||||||| ||||||| | ||||| |
|
|
| T |
27680139 |
tttatcacttttaaaagccatccacctcaacaattcaagagcttctgtctcattcaacccttctactgcatgtgtactttctatgccatgactgcttagt |
27680040 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||| || |||||| | ||||||| ||||||||||| ||||| |||| || |||||| |
|
|
| T |
27680039 |
aagtctttgtttcgagtggtaatgatgactctgcttccacatccgaaccaatcaagtcctccagccaaagcatgcagttgcttcaaattgtcaac |
27679945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 27336988 - 27337258
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||| |||||| || || |
|
|
| T |
27336988 |
tctttccaaacaagttagaacccactatttctaaaactaagggaatgcccgaaccatatgaaactgcacggtttaaaacatcttcataacttggcggtac |
27337087 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| ||| ||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
27337088 |
tttgttattcttaaaagccgtccacctcaacaattcaagagcttccttcccatatagccctcttactgcatatgttctttctatcccatgacaggttagt |
27337187 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
27337188 |
aagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagc |
27337258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 27397728 - 27397998
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||| |||||| || || |
|
|
| T |
27397728 |
tctttccaaacaagttagaacccactatttctaaaactaagggaatgcccgaaccatatgaaactgcacggtttaaaacatcttcataacttggcggtac |
27397827 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| ||| ||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
27397828 |
tttgttattcttaaaagccgtccacctcaacaattcaagagcttccttcccatatagccctcttactgcatatgttctttctatcccatgacaggttagt |
27397927 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
27397928 |
aagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagc |
27397998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 27591914 - 27592195
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| || ||||| |||| |||||||| ||||||||| ||||||||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
27591914 |
tctttccaaacaagttagaacccactacttctatcgctaatggaaggccagaagcatatacaactgcacgctttaaaatgtcttcataacttgaaggaac |
27592013 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||| ||||||||||||||||||||||||||||||||| || ||| |||| |||||| |||||||||||||||||| |||| |
|
|
| T |
27592014 |
tttctcatttttaaaagccttccacctcaacaattcaagagcttctgtcccattcaactcttctactgcatatgttttttctatcccatgacagtctagt |
27592113 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgat |
279 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||| | || |||||| | ||||||| |||||||||| ||| |||| |
|
|
| T |
27592114 |
aagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcatctagctgat |
27592195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 27697479 - 27697760
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| ||||||| ||| | ||||| ||||| |
|
|
| T |
27697479 |
tctttccaaacaagttagaacccactatttctataactaacggaaggccagaaacatatgaaactgcacgacttaaaatctctttgtaccttgatggaac |
27697578 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||| |||| | ||||||||||||||| | |||| |
|
|
| T |
27697579 |
attgtcacttttaaaagccatccacctcaacaattcaagagcttctgtcccattcaacccttttactgcatacgttttttctatcccatgatggtctagt |
27697678 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgat |
279 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||| | ||| |||||| ||||||| |||||||| ||||| |||| |
|
|
| T |
27697679 |
aagtgtttatctcgggtggtgatgatgactctgcttccaggaccaaaccaatcgagtcctccagccaaagcctgtagctgat |
27697760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 27603597 - 27603891
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || ||| |||||||||||||| || |||||||||||||||||||| ||||||| | ||||| || |||||| || |
|
|
| T |
27603597 |
tctttccaaacaagttggaacccactacttccaaaactaagggaagtcctgaagcatatgaaactgcacggtttaaaacgtcttcataaactgaaggtac |
27603696 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||||||||||||||||||||||||||||| | | || |||| || | |||| ||||||| |||||| ||||||| |
|
|
| T |
27603697 |
tttgttattcttaaaagccatccacctcaacaattcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagt |
27603796 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||||| | ||| |||||| |||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
27603797 |
aagtgtctgtctcgagtggtaatgatgaccctgcttccaagcccaaaccaatcaggttctcctgccaaagcctgtagttgccccatatcgtcaac |
27603891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 27676513 - 27676764
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| || ||||| |||| |||||||| ||||||||| ||||||||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
27676513 |
tctttccaaacaagttagaacccactacttctatcgctaatggaaggccagaagcatatacaactgcacgctttaaaatgtcttcataacttgaaggaac |
27676612 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||| ||||||||||||||||||||||||||||| ||| || ||| |||| |||||| |||||||||||||||||| |||| |
|
|
| T |
27676613 |
tttctcatttttaaaagccttccacctcaacaattcaagagcttctgtctcattcaactcttctactgcatatgttttttctatcccatgacagtctagt |
27676712 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaat |
249 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||| | ||| |||||| |
|
|
| T |
27676713 |
aagtgtttatctcgggtggtgatgatgactctgcttccaggaccaaaccaat |
27676764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 26624560 - 26624288
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||| ||||||||| ||||| ||| ||||||||| |
|
|
| T |
26624560 |
tctttccaaacaagttggaacccacaatttctaaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaac |
26624461 |
T |
|
| Q |
101 |
att---tcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||| || | ||||||||||| || |||| |||| ||| || ||| |||||||||| | ||||| |
|
|
| T |
26624460 |
tttgtcacttttaaaagccatccacctcaacaattcatgaccgtctgtcccatacaacccttctactgcatgtgtgctttttatcccatgagtgcttagt |
26624361 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcat |
270 |
Q |
| |
|
| |||||| | |||||||||||| ||||| ||||||||||| || |||||| | | ||||| |||||||||| |
|
|
| T |
26624360 |
aggtgtttgtttcgagtggtaattatgaccctgcttccacgtccgaaccaatcaagccctccagccaaagcat |
26624288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 26730537 - 26730265
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||| ||||||||| ||||| ||| ||||||||| |
|
|
| T |
26730537 |
tctttccaaacaagttggaacccacaatttctaaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaac |
26730438 |
T |
|
| Q |
101 |
att---tcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||| || | ||||||||||| || |||| |||| ||| || ||| |||||||||| | ||||| |
|
|
| T |
26730437 |
tttgtcacttttaaaagccatccacctcaacaattcatgaccgtctgtcccatacaacccttctactgcatgtgtgctttttatcccatgagtgcttagt |
26730338 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcat |
270 |
Q |
| |
|
| |||||| | |||||||||||| ||||| ||||||||||| || |||||| | | ||||| |||||||||| |
|
|
| T |
26730337 |
aggtgtttgtttcgagtggtaattatgaccctgcttccacgtccgaaccaatcaagccctccagccaaagcat |
26730265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 26825108 - 26824829
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| || || |
|
|
| T |
26825108 |
tctttccaaacaaattggaacccactatttctaatactaagggaaggcccgaagcatatgaaactgcacggtttaaaatgtgttcataacttgacggtac |
26825009 |
T |
|
| Q |
101 |
---atttcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| ||||||||||| |||||||||||||||||||||||||| || |||| ||||||||| ||||||| ||||| ||| ||| |
|
|
| T |
26825008 |
tttgttatttttaaaagccatccaccttaacaattcaagagcttctgtcccatacaacccttctacttcatacattaattctatctcatgattggtaagt |
26824909 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttg |
277 |
Q |
| |
|
|| ||||| |||||||| ||||||||||||||||| ||| || |||||| | |||||| |||||||||| |||||| |
|
|
| T |
26824908 |
aattgtttgtctcgagttgtaatgatgactctgctgccattaccgaaccaatcaaatcctccagccaaagcatctagttg |
26824829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 26862869 - 26862608
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| | |||||| |||||||| |||||||||| ||||||||| ||||||| | | | |||| |||||||| |
|
|
| T |
26862869 |
tctttccaaacaagttagaacccactatttcgagaactaacggaaggccggaagcatatgcaactgcacggtttaaaacatcgttataactcgaaggaac |
26862770 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
| || |||||| |||||||||||||||||||||| |||||||||| ||| || || ||||| |||||| ||||||||||||| || |||||| |
|
|
| T |
26862769 |
ttcaccatttttaaaagccatccacctcaacaattcaaaagcttctgtctcatgtagcccgtttaccgcatatgttctttctatcccatggcatgttagt |
26862670 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcc |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| | ||| |||||| | ||||||| |
|
|
| T |
26862669 |
aagtgtttatctcgagtggtaatgatgactctacttccatgaccaaaccaatcaagtcctcc |
26862608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 28782213 - 28782096
Alignment:
| Q |
175 |
tttctatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtag |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
28782213 |
tttctatcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtag |
28782114 |
T |
|
| Q |
275 |
ttgattcatatcgtcaac |
292 |
Q |
| |
|
||| | |||||||||||| |
|
|
| T |
28782113 |
ttgctccatatcgtcaac |
28782096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 229
Target Start/End: Original strand, 27530233 - 27530425
Alignment:
| Q |
37 |
ctaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttcctttaaacgccatccacctcaacaattcaag |
136 |
Q |
| |
|
|||| |||||||| |||||||| | || |||||| ||||||||| ||||| |||||||||||||||| |||| || |||||||||||||||||||| || |
|
|
| T |
27530233 |
ctaatggaaggccagaagcataagtaagtgcacggtttaaaatgtcttcatgacttgaaggaacattttctttgaaagccatccacctcaacaattcgag |
27530332 |
T |
|
| Q |
137 |
agcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgactct |
229 |
Q |
| |
|
|||||||||| ||| || |||| |||| ||| || | |||||||||||||| ||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
27530333 |
agcttctgtcgcattcaacccttctactgcatgtgtactttctatcccatgaatctttagtaagtgtttgtttcgagtagtaatgatgactct |
27530425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 37 - 268
Target Start/End: Complemental strand, 25484312 - 25484078
Alignment:
| Q |
37 |
ctaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttcc---tttaaacgccatccacctcaacaattc |
133 |
Q |
| |
|
||||||| ||||| || ||||| | |||| |||| |||||||| ||||| ||||||||||||| || | |||||| ||||| | |||||||||||| |
|
|
| T |
25484312 |
ctaagggcaggccagatgcataagtaactacacggtttaaaatctcttcataacttgaaggaactttgtcatttttaaaagccattcgcctcaacaattc |
25484213 |
T |
|
| Q |
134 |
aagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgctt |
233 |
Q |
| |
|
||||||||||||| ||| || ||| |||| ||| || | || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25484212 |
aagagcttctgtctcattcaattcttctactgcatgtgtacttgtaatcccatgacaggctagtaagtgtttatcacgagtggtaatgatgactctgctt |
25484113 |
T |
|
| Q |
234 |
ccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
||| | || |||||| | ||||||| |||||||| |
|
|
| T |
25484112 |
ccatgaccgaaccaatcaagtcctccagccaaagc |
25484078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 268
Target Start/End: Complemental strand, 25539796 - 25539562
Alignment:
| Q |
37 |
ctaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttcc---tttaaacgccatccacctcaacaattc |
133 |
Q |
| |
|
||||||| ||||| || ||||| | |||| |||| |||||||| ||||| |||| |||||||| || | |||||||||||| | |||||||||||| |
|
|
| T |
25539796 |
ctaagggtaggccagatgcataagtaactacacggtttaaaatctcttcataactcgaaggaactttgtcatttttaaacgccattcgcctcaacaattc |
25539697 |
T |
|
| Q |
134 |
aagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgctt |
233 |
Q |
| |
|
||||||||||||| ||| || ||||||||| ||| || | || ||||||||||||| || ||| ||| |||| |||||||||||||||||||||||| |
|
|
| T |
25539696 |
aagagcttctgtctcattcaacccttttactacatgtgtacttgtaatcccatgacaggctaataaatgtgtatcacgagtggtaatgatgactctgctt |
25539597 |
T |
|
| Q |
234 |
ccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
||| | || |||||| | ||||||| |||||||| |
|
|
| T |
25539596 |
ccaggaccgaaccaatcaagtcctccagccaaagc |
25539562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 268
Target Start/End: Complemental strand, 26144121 - 26143887
Alignment:
| Q |
37 |
ctaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttcc---tttaaacgccatccacctcaacaattc |
133 |
Q |
| |
|
||||||| ||||| || ||||| | |||| |||| |||||||| ||||| ||||||||||||| || | |||||| ||||| | |||||||||||| |
|
|
| T |
26144121 |
ctaagggcaggccagatgcataagtaactacacggtttaaaatttcttcataacttgaaggaactttgtcatttttaaaagccattcgcctcaacaattc |
26144022 |
T |
|
| Q |
134 |
aagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgctt |
233 |
Q |
| |
|
||||||||||||| ||| || ||| |||| ||| || | || ||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
26144021 |
aagagcttctgtctcattcaattcttctactgcatgtgtacttgtaatcccatgacaggctagtaagtgtttatcacgagtggtaatgatgaccctgctt |
26143922 |
T |
|
| Q |
234 |
ccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
||| | || |||||| | ||||||| |||||||| |
|
|
| T |
26143921 |
ccatgaccgaaccaatcaagtcctccagccaaagc |
26143887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 268
Target Start/End: Complemental strand, 25580902 - 25580741
Alignment:
| Q |
107 |
tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgttta |
206 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||||||||||| ||| || ||| |||| ||| || | || ||||||||||||| ||||||||||||| |
|
|
| T |
25580902 |
tttaaaagccattcgcctcaacaattcaagagcttctgtctcattcaattcttctactgcatgtgtacttgtaatcccatgacaggctagtaagtgttta |
25580803 |
T |
|
| Q |
207 |
tctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|| ||||||||||||||||| ||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
25580802 |
tcacgagtggtaatgatgacactgcttccatgaccgaaccaatcaagtcctccagccaaagc |
25580741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 268
Target Start/End: Complemental strand, 27215736 - 27215471
Alignment:
| Q |
6 |
ccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttc |
105 |
Q |
| |
|
|||||||| ||||| || ||| || ||| | |||| |||||||| ||| |||| | || ||||||||| |||||||||||| ||||||||||||| | | |
|
|
| T |
27215736 |
ccaaacaaattggaccctattgttactatagctaatggaaggccagaaacataagtaagtgcacgattaaaaatgccttcataacttgaaggaacttcac |
27215637 |
T |
|
| Q |
106 |
c---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtg |
202 |
Q |
| |
|
| |||||| |||||| |||||||||||| | |||||||| |||||| ||| |||| | || |||||||||||||| |||||||||| || |
|
|
| T |
27215636 |
catttttaaatgccatcaacctcaacaatttatgagcttcttcgtcatatagaccgcttacgtgatgcaatctttctatcccatgataggttagtaactg |
27215537 |
T |
|
| Q |
203 |
tttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
| | | |||||| |||||||||||||| ||||||| ||| |||||| | ||||||| |||||||| |
|
|
| T |
27215536 |
tctgtttcgagtcgtaatgatgactctacttccaccaccaaaccaatcaagtcctccagccaaagc |
27215471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 238
Target Start/End: Original strand, 25492217 - 25492452
Alignment:
| Q |
6 |
ccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttc |
105 |
Q |
| |
|
|||||||| || || || |||||| ||||| |||| |||||||| |||||||| | || |||| | |||||||| ||||| || |||||||||| | |
|
|
| T |
25492217 |
ccaaacaaatttgaccctattattactaaagctaatggaaggccagaagcataggtaattgcaagtgttaaaatgtcttcataaattgaaggaactctgt |
25492316 |
T |
|
| Q |
106 |
c---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtg |
202 |
Q |
| |
|
| |||||| ||||||||| | | |||||||||||||||| ||||| || ||| |||| ||| | ||||||||||||||| |||||||| ||| |
|
|
| T |
25492317 |
catttttaaaagccatccacataagcaattcaagagcttcttccccatgcaactcttctactgcatgcatactttctatcccatgactggttagtatgtg |
25492416 |
T |
|
| Q |
203 |
tttatctcgagtggtaatgatgactctgcttccacg |
238 |
Q |
| |
|
||| ||||||||||||||||| |||| ||||||||| |
|
|
| T |
25492417 |
tttgtctcgagtggtaatgataactccgcttccacg |
25492452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26850001 - 26849922
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatg |
80 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| |||| |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
26850001 |
tctttccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcatatttaactgcacgatttaaaatg |
26849922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 25511996 - 25511943
Alignment:
| Q |
183 |
ccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgcttcca |
236 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25511996 |
ccatgacaggctagtaagtgtttatcacgagtggtaatgatgactctgcttcca |
25511943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26636935 - 26636856
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatg |
80 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| |||| |||||||| ||||||||| ||||||||| ||||||||| |
|
|
| T |
26636935 |
tctttccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatg |
26636856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26742901 - 26742822
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatg |
80 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| |||| |||||||| ||||||||| ||||||||| ||||||||| |
|
|
| T |
26742901 |
tctttccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatg |
26742822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26960414 - 26960335
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatg |
80 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| |||| |||||||| ||||||||| ||||||||| ||||||||| |
|
|
| T |
26960414 |
tcttgccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatg |
26960335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 268
Target Start/End: Complemental strand, 26057086 - 26056941
Alignment:
| Q |
123 |
ctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatga |
222 |
Q |
| |
|
||||| |||||||||||||||||| ||| || |||| |||| ||| || | || || ||||| ||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
26057086 |
ctcaataattcaagagcttctgtctcattcaacccttctactgcatgtgtacttgtattcacatgataggctagtaagcgtttatcacgagtggtaatga |
26056987 |
T |
|
| Q |
223 |
tgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
26056986 |
tgactctgcttccaagaccgaaccaatcaagtcctccagccaaagc |
26056941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 268
Target Start/End: Complemental strand, 26077056 - 26076911
Alignment:
| Q |
123 |
ctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatga |
222 |
Q |
| |
|
||||| |||||||||||||||||| ||| || |||| |||| ||| || | || || ||||| ||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
26077056 |
ctcaataattcaagagcttctgtctcattcaacccttctactgcatgtgtacttgtattcacatgataggctagtaagcgtttatcacgagtggtaatga |
26076957 |
T |
|
| Q |
223 |
tgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||||||||| | || |||||| | ||||||| |||||||| |
|
|
| T |
26076956 |
tgactctgcttccaagaccgaaccaatcaagtcctccagccaaagc |
26076911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27664107 - 27664185
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaat |
79 |
Q |
| |
|
|||| ||||||||||||||||||| || || |||| |||| |||||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
27664107 |
tctttccaaacaagttggaacccactacttttaaagctaatggaaggccagaagcatattcaactgcacggtttaaaat |
27664185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 25075151 - 25075077
Alignment:
| Q |
6 |
ccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatg |
80 |
Q |
| |
|
||||||||||||||||||| | ||||||| |||| |||||||| ||||||||| || |||||| ||||||||| |
|
|
| T |
25075151 |
ccaaacaagttggaacccacaacttctaaagctaatggaaggccagaagcatatttaattgcacggtttaaaatg |
25075077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26951032 - 26950954
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaat |
79 |
Q |
| |
|
|||| ||||||||||| ||||||| || ||||||| |||| |||||||| | ||||||| ||||||||| |||||||| |
|
|
| T |
26951032 |
tctttccaaacaagttagaacccactacttctaaagctaatggaaggccagcagcatatttaactgcacggtttaaaat |
26950954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28326767 - 28326673
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaa |
95 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| | || |||||||| |||||||| | ||||||| | ||||||||| |||||| ||||| |
|
|
| T |
28326767 |
tctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcataagttactgcacagtataaaatgccgtcaaaatttgaa |
28326673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28504403 - 28504309
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaa |
95 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| | || |||||||| |||||||| | ||||||| | ||||||||| |||||| ||||| |
|
|
| T |
28504403 |
tctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcataagttactgcacagtataaaatgccgtcaaaatttgaa |
28504309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26812817 - 26812738
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatg |
80 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| | |||| |||||||| |||| |||| ||||| |||||||||||| |
|
|
| T |
26812817 |
tctttccaaacaagttggaacccactacttctatagctaatggaaggccagaagtatattttactgcgcgatttaaaatg |
26812738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 25074953 - 25074916
Alignment:
| Q |
201 |
tgtttatctcgagtggtaatgatgactctgcttccacg |
238 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
25074953 |
tgtttgtctcgagtggtaatgatgactctgctgccacg |
25074916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 26812636 - 26812579
Alignment:
| Q |
179 |
tatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgcttcca |
236 |
Q |
| |
|
|||||||||||| | ||| || ||| | ||||||||||||||||||||||| |||||| |
|
|
| T |
26812636 |
tatcccatgacatgatagcaaatgtctgtctcgagtggtaatgatgactctacttcca |
26812579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28186683 - 28186626
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcata |
58 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| | || |||||||| |||||||| |
|
|
| T |
28186683 |
tctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcata |
28186626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28296633 - 28296690
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcata |
58 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| | || |||||||| |||||||| |
|
|
| T |
28296633 |
tctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcata |
28296690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28515440 - 28515383
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcata |
58 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||||| | || |||||||| |||||||| |
|
|
| T |
28515440 |
tctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcata |
28515383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 235
Target Start/End: Original strand, 27664307 - 27664335
Alignment:
| Q |
207 |
tctcgagtggtaatgatgactctgcttcc |
235 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
27664307 |
tctcgagtggtaatgatgactctgcttcc |
27664335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 8776 - 8482
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| || |
|
|
| T |
8776 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataacttgaaggtac |
8677 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||| |||||||| |||||||||||||| ||||| | ||||| ||||||| | | ||| ||||||||||| ||||| |
|
|
| T |
8676 |
tttgttattcttaaaagccatccatctcaacaactcaagagcttctgttccatacagccctttcacttcatgcgtactttttatcccatgacttcttagt |
8577 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8576 |
aagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgcttcatatcgtcaac |
8482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 12568 - 12862
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| || |
|
|
| T |
12568 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataacttgaaggtac |
12667 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||| |||||||| |||||||||||||| ||||| | ||||| ||||||| | | ||| ||||||||||| ||||| |
|
|
| T |
12668 |
tttgttattcttaaaagccatccatctcaacaactcaagagcttctgttccatacagccctttcacttcatgcgtactttttatcccatgacttcttagt |
12767 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12768 |
aagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgcttcatatcgtcaac |
12862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 3605 - 3899
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| || |
|
|
| T |
3605 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataacttgaaggtac |
3704 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||| |||||||| |||||||||||||||||||| | ||||| ||||||| | | ||||||||||||||| |||| |
|
|
| T |
3705 |
tttgttattcttaaaagccatccatctcaacaactcaagagcttctgtcccatacagccctttcacttcatgcgtactttctatcccatgacttcttagc |
3804 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||| ||||| |||||| |||| ||||||||||||| |||||||| | |||||||||||| |
|
|
| T |
3805 |
aagtgtttgtctcgagtggtaatgatgaccctgcttccaaggccaaaccaatcaggttctcctgccaaagcctgtagttgctccatatcgtcaac |
3899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 292
Target Start/End: Original strand, 2443 - 2726
Alignment:
| Q |
12 |
aagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatt---tcctt |
108 |
Q |
| |
|
||||| ||||||| |||||||| |||||| |||||||| |||||||||| ||||||||| |||||||| |||| ||| |||||||||||| | || |
|
|
| T |
2443 |
aagttagaacccactatttctataactaacggaaggccagaagcatatgcaactgcacggtttaaaatctcttcgtaacctgaaggaacattgtcacttt |
2542 |
T |
|
| Q |
109 |
taaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatc |
208 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || |||| |||||||| | ||| ||||||||||||||||||||||||||| || |
|
|
| T |
2543 |
taaaagccatccacctcaacaattcaagagcttctgtcccatacaacccttctacttcatgcatactttttatcccatgacaggttagtaagtgtttgtc |
2642 |
T |
|
| Q |
209 |
tcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
2643 |
tcgagtggtaatgatgactttgcttccacggccgaaccaatcaggtcctccagccaaagcatgtagttgcttcatattgtcaac |
2726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 29272731 - 29273015
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||| || |
|
|
| T |
29272731 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataaattgaaggtac |
29272830 |
T |
|
| Q |
101 |
att--tcct-ttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | | ||||| |||||||||||||||||||||||||||| ||||||||| | |||| |||||||| | ||| |||||||||||| ||||| |
|
|
| T |
29272831 |
tttgttattcttaaaagccatccacctcaacaattcaagagcttttgtcccatacagcccttctacttcatgcatactttttatcccatgacaagttagc |
29272930 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattca |
282 |
Q |
| |
|
|||||||| |||||||| |||||||||||| ||||||||||||| |||||| | ||||||| ||||||||||||||||| |||| |
|
|
| T |
29272931 |
aagtgtttgtctcgagtagtaatgatgactttgcttccacggccgaaccaatcatgtcctccagccaaagcatgtagttgcttca |
29273015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 60858 - 60564
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| ||||| |||||||| |||||||| | |||| ||||||| ||||| |||| ||||||||||||| |
|
|
| T |
60858 |
tctttccaaacaagttagaacccactatttctataactaccggaaggccagaagcataagcaactacacgattcaaaatcttttcataacttgaaggaac |
60759 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||| ||||||||| |||| |
|
|
| T |
60758 |
tttgtcatttttaaaagccatccacctcaacaattcaagagcttctgtcacattcaacccttttactgcatatgttttttctatctcatgacaggctagt |
60659 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| ||||||| | || |||||| | |||||| |||||||||| ||||| ||||||| |||||| |
|
|
| T |
60658 |
aagtgtttatctcgggtggtgatgatgactcggcttccaggaccgaaccaatcaactcctccagccaaagcattcagttgcttcatattgtcaac |
60564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 18075050 - 18074756
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| ||||| |||||||| |||||||| | |||| ||||||| ||||| |||| ||||||||||||| |
|
|
| T |
18075050 |
tctttccaaacaagttagaacccactatttctataactaccggaaggccagaagcataagcaactacacgattcaaaatcttttcataacttgaaggaac |
18074951 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||| ||||||||| |||| |
|
|
| T |
18074950 |
tttgtcatttttaaaagccatccacctcaacaattcaagagcttctgtcacattcaacccttttactgcatatgttttttctatctcatgacaggctagt |
18074851 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| ||||||| | || |||||| | |||||| |||||||||| ||||| ||||||| |||||| |
|
|
| T |
18074850 |
aagtgtttatctcgggtggtgatgatgactcggcttccaggaccgaaccaatcaactcctccagccaaagcattcagttgcttcatattgtcaac |
18074756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 18678449 - 18678728
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| | |||| |||||||| |||||||| ||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
18678449 |
tctttccaaacaagttggaacccactacttctatagctaatggaaggccagaagcatacacaactgcacgttttaaaatctcttcataacttgaaggaac |
18678548 |
T |
|
| Q |
101 |
att---tcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| |||||||||||||||||||||||||| | | || | | | ||||||||||||| | |||||||| ||||| | ||||| |
|
|
| T |
18678549 |
tttgtaacttttaaaagccatccacctcaacaattcaagagcattttccctagacatcccttttacttcatgcataatttctatctcatgattgcttagt |
18678648 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttg |
277 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||||||| || |||||| | ||||||| ||||||||||| ||||| |
|
|
| T |
18678649 |
aagtgtttgttacgagtggtaatgataactctgcttccacaaccgaaccaatcacgtcctccggccaaagcatgcagttg |
18678728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 18722974 - 18723268
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| | |||| |||||||| |||||||| | |||||| || |||||||| ||||| ||||||||||||| |
|
|
| T |
18722974 |
tctttccaaacaagttggaacccactacttctatagctaatggaaggccagaagcatacgcaactgctcggtttaaaatctcttcataacttgaaggaac |
18723073 |
T |
|
| Q |
101 |
att---tcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| | |||||| |||||||||||||||||||||||||| | | | | | | ||||||||||||| | |||||| | ||||| ||||||| |
|
|
| T |
18723074 |
tttgtaacttttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatgcataatttctacctcatgattggttagt |
18723173 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgtcaac |
292 |
Q |
| |
|
|| ||||| | |||||||||||||| |||||||||||| ||| |||||| ||||||||| ||||||||||| ||||| |||| || |||||| |
|
|
| T |
18723174 |
aattgtttgttacgagtggtaatgataactctgcttccagagccgaaccaatcaggtcctccagccaaagcatgcagttgtttcaaattgtcaac |
18723268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 18698289 - 18698568
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| | |||| |||||||| |||||||| ||||||| | || ||||| ||||| ||||||||||||| |
|
|
| T |
18698289 |
tctttccaaacaagttggaacccactacttctagagctaatggaaggccagaagcatacacaactgcatggttaaaaatctcttcataacttgaaggaac |
18698388 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||| | | | | | | ||||||||||||| | |||||||| ||||| ||||||| |
|
|
| T |
18698389 |
tttgtaatttttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatggataatttctatctcatgattggttagt |
18698488 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttg |
277 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||||||| ||| |||||| | ||||||| ||||||||||| ||||| |
|
|
| T |
18698489 |
aagtgtttgttacgagtggtaatgataactctgcttccacagccgaaccaatcacgtcctccagccaaagcatgcagttg |
18698568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 18654366 - 18654639
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| | ||||| | |||| |||||||| |||||||| | ||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
18654366 |
tctttccaaacaagttggaacccacgacttctatagctaatggaaggccagaagcatacgcaactgcacggtttaaaatctcttcataacttgaaggaac |
18654465 |
T |
|
| Q |
101 |
att---tcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||| | | | | | | ||||||||||||| | |||||||| ||||| | ||||| |
|
|
| T |
18654466 |
tttgtaaattttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatgcataatttctatctcatgattgcttagt |
18654565 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatg |
271 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||||||| || |||||| | ||||||| ||||||||||| |
|
|
| T |
18654566 |
aagtgtttgttacgagtggtaatgataactctgcttccacaaccgaaccaatcacgtcctccagccaaagcatg |
18654639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 18730393 - 18730672
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| | |||| |||||||| |||||||| ||||||| | || ||||| ||||| ||||||||||||| |
|
|
| T |
18730393 |
tctttccaaacaagttggaacccactacttctagagctaatggaaggccagaagcatacacaactgcatggttaaaaatctcttcataacttgaaggaac |
18730492 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||| | | | | | | ||||||||||||| | |||||||| ||||| ||||||| |
|
|
| T |
18730493 |
tttgtaatttttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatggataatttctatctcatgattggttagt |
18730592 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttg |
277 |
Q |
| |
|
|||||||| | |||||||||||||| ||| ||||||||| ||| |||||| | ||||||| ||||||||||| ||||| |
|
|
| T |
18730593 |
aagtgtttgttacgagtggtaatgataactatgcttccacagccgaaccaatcacgtcctccagccaaagcatgcagttg |
18730672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 282
Target Start/End: Original strand, 5089848 - 5090127
Alignment:
| Q |
6 |
ccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttc |
105 |
Q |
| |
|
|||||||| |||||||||| | ||||||| | || |||||||| |||||||| | || |||| |||||||| |||||| |||||| | |||| | | |
|
|
| T |
5089848 |
ccaaacaaattggaacccacaacttctaaagccaatggaaggccagaagcataagttaccacacggtttaaaattccttcataacttggattaacagtac |
5089947 |
T |
|
| Q |
106 |
c---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtg |
202 |
Q |
| |
|
|||||| ||| ||||||| || |||| ||||||||| || ||| |||||| | |||||| |||| | || ||||||||||| |||| ||||| |
|
|
| T |
5089948 |
tatttttaaaagccttccaccttaataattgaagagcttcgttctcatttaaaccatctacttcgtatgttatatcaatcccatgacattttagcaagtg |
5090047 |
T |
|
| Q |
203 |
tttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattca |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| ||| | ||| |||||| |||| |||| |||||| | |||||||| |||| |
|
|
| T |
5090048 |
tttgtctcgagtggtaatgatgactctgctgccaagaccaaaccaatcaggttctccggccaaaacctgtagttgtttca |
5090127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 18688515 - 18688656
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| | |||| |||||||| |||||||| |||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
18688515 |
tctttccaaacaagttggaacccactacttctatagctaatggaaggccagaagcatacacgactgcacggtttaaaatctcttcataacttgaaggaac |
18688614 |
T |
|
| Q |
101 |
---atttcctttaaacgccatccacctcaacaattcaagagc |
139 |
Q |
| |
|
|| | |||||| |||||||||||||||||||||||||| |
|
|
| T |
18688615 |
tttataacttttaaaagccatccacctcaacaattcaagagc |
18688656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 109; Significance: 8e-55; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 28126568 - 28126838
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||| ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| || ||||||| | ||| ||||||||||||| |
|
|
| T |
28126568 |
tctttccaaataagttggaacccactatttctataactaagggaaggcctgaagcatatgaaactgcccggtttaaaacatcatcataacttgaaggaac |
28126667 |
T |
|
| Q |
101 |
atttcc---tttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| |||| ||| |||| || |||||||| ||| | | ||||||||||||||||||||||| |
|
|
| T |
28126668 |
tttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttacatacaacccttttaccgcatgcgtactttctatcccatgacaggttagt |
28126767 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||||| || |||||| | ||||||| |||||||| |
|
|
| T |
28126768 |
aagtgtttctctcgagtggtaatgatgactttgcttccacgaccgaaccaatcaagtcctccagccaaagc |
28126838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 28163298 - 28163539
Alignment:
| Q |
30 |
tctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaacatttcc---tttaaacgccatccacctca |
126 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||| ||||||||| ||| |
|
|
| T |
28163298 |
tctataactaagggaaggcctgaagcatatgaaactgcacgatttaaaacatcttcataacttgaaggaactttgttatttttaaaagccatccacgtca |
28163397 |
T |
|
| Q |
127 |
acaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtttatctcgagtggtaatgatgac |
226 |
Q |
| |
|
|||||||||| ||||| |||||||| || |||| ||| || | ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28163398 |
acaattcaagcgcttccgtcccatacaacccttctaccgaatgcatactttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgac |
28163497 |
T |
|
| Q |
227 |
tctgcttccacggccataccaatgaggtcctcctgccaaagc |
268 |
Q |
| |
|
||||||||||| || |||||| ||||||| |||||||| |
|
|
| T |
28163498 |
cctgcttccacgaccgaaccaatcgagtcctccagccaaagc |
28163539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 267233 - 267523
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaatgccttcaaaacttgaaggaac |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||||||| |||||||| |||||||| | |||||||||| ||||||| | | || |||| ||||| |
|
|
| T |
267233 |
tctttccaaacaagttagaacccacaatttctaaaactaacggaaggccagaagcataagcaactgcacgaattaaaatctcattgtaaattgatggaac |
267332 |
T |
|
| Q |
101 |
---atttcctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagt |
197 |
Q |
| |
|
|| |||||| |||||||| |||||||||||||||||||| |||||||| || |||| |||||||| | | ||||||||||||||||||||||| |
|
|
| T |
267333 |
tggatcatttttaaaagccatccaactcaacaattcaagagcttcggtcccatacaacccttctacttcatgcgtactttctatcccatgacaggttagt |
267432 |
T |
|
| Q |
198 |
aagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaatgaggtcctcctgccaaagcatgtagttgattcatatcgt |
288 |
Q |
| |
|
|| || || ||||||||||||| || ||||||||||||| ||| |||||| | ||||||| ||||||||||| | ||| || ||||||| |
|
|
| T |
267433 |
aattgcttgtctcgagtggtaacgacgactctgcttccatagccgaaccaatcaagtcctccagccaaagcatgcaattgttttatatcgt |
267523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1870 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1870
Description:
Target: scaffold1870; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 58 - 1
Alignment:
| Q |
1 |
tcttcccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcata |
58 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
58 |
tctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcata |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 17992215 - 17992348
Alignment:
| Q |
105 |
cctttaaacgccatccacctcaacaattcaagagcttctgtcccatataaaccttttacttcatatggattttctatcccatgacaggttagtaagtgtt |
204 |
Q |
| |
|
|||||||| ||| ||||||| |||| ||||||||||||| | ||| ||| || | |||||||||| ||| ||||||||||| |||| || |||| |
|
|
| T |
17992215 |
cctttaaatgccttccaccttaacagttcaagagcttcttcctcatttaatccatctacttcatatattgttttaatcccatgacatgttaacaaatgtt |
17992314 |
T |
|
| Q |
205 |
tatctcgagtggtaatgatgactctgcttccacg |
238 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| |
|
|
| T |
17992315 |
tgtctcgagtggtaatgatgactctgctgccacg |
17992348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 17992113 - 17992186
Alignment:
| Q |
6 |
ccaaacaagttggaacccattatttctaaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaat |
79 |
Q |
| |
|
||||||||||||||||||| || ||||||| |||| || ||||| | ||||||| |||| |||| |||||||| |
|
|
| T |
17992113 |
ccaaacaagttggaacccactacttctaaagctaatgggaggccagcagcatatttaactacacggtttaaaat |
17992186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 16691971 - 16691905
Alignment:
| Q |
183 |
ccatgacaggttagtaagtgtttatctcgagtggtaatgatgactctgcttccacggccataccaat |
249 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||||||||| |||||| | ||| |||||| |
|
|
| T |
16691971 |
ccatgacttgttagtaagtgtttgtctcgagtggtaatgatgactctacttccaggaccaaaccaat |
16691905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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