View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8873_high_13 (Length: 278)

Name: NF8873_high_13
Description: NF8873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8873_high_13
NF8873_high_13
[»] chr7 (102 HSPs)
chr7 (1-249)||(23101278-23101526)
chr7 (1-249)||(28342327-28342575)
chr7 (1-248)||(39784079-39784326)
chr7 (1-249)||(29614736-29614984)
chr7 (1-246)||(3022906-3023151)
chr7 (1-246)||(9882212-9882456)
chr7 (6-246)||(18838374-18838614)
chr7 (1-246)||(28034780-28035025)
chr7 (1-246)||(7993122-7993367)
chr7 (5-246)||(33382621-33382862)
chr7 (1-249)||(509636-509874)
chr7 (14-246)||(8675326-8675557)
chr7 (1-242)||(12740353-12740593)
chr7 (6-246)||(44121885-44122115)
chr7 (3-246)||(40460692-40460925)
chr7 (1-246)||(37327907-37328142)
chr7 (4-246)||(46405416-46405648)
chr7 (1-242)||(29585495-29585725)
chr7 (1-246)||(41827294-41827529)
chr7 (1-246)||(44256741-44256986)
chr7 (4-246)||(39028080-39028312)
chr7 (1-187)||(32883762-32883948)
chr7 (1-227)||(47914253-47914479)
chr7 (1-236)||(12963681-12963911)
chr7 (1-227)||(973171-973397)
chr7 (1-227)||(30440783-30441009)
chr7 (1-215)||(43581096-43581310)
chr7 (1-236)||(10068446-10068682)
chr7 (1-227)||(40996643-40996869)
chr7 (1-227)||(7719254-7719480)
chr7 (1-227)||(12893395-12893621)
chr7 (1-227)||(18914729-18914955)
chr7 (1-227)||(34695260-34695486)
chr7 (1-227)||(44343390-44343616)
chr7 (1-227)||(47879155-47879381)
chr7 (1-154)||(19251519-19251672)
chr7 (107-246)||(37972842-37972981)
chr7 (10-212)||(33892269-33892461)
chr7 (1-215)||(20275269-20275483)
chr7 (1-145)||(17001099-17001243)
chr7 (34-227)||(7718356-7718549)
chr7 (1-227)||(34008999-34009226)
chr7 (93-239)||(43187339-43187485)
chr7 (12-149)||(3797129-3797266)
chr7 (1-145)||(47066683-47066828)
chr7 (4-164)||(10676477-10676637)
chr7 (1-227)||(32142911-32143139)
chr7 (1-227)||(39219371-39219597)
chr7 (1-227)||(7113443-7113665)
chr7 (1-154)||(31638862-31639015)
chr7 (12-227)||(9179871-9180076)
chr7 (4-164)||(25805675-25805835)
chr7 (92-176)||(43679492-43679576)
chr7 (1-117)||(29893061-29893177)
chr7 (6-145)||(44623352-44623491)
chr7 (1-154)||(727499-727653)
chr7 (1-68)||(48117746-48117813)
chr7 (90-151)||(447852-447913)
chr7 (5-164)||(1470291-1470448)
chr7 (158-227)||(17001037-17001106)
chr7 (96-228)||(19810874-19810996)
chr7 (158-218)||(47066821-47066881)
chr7 (1-68)||(28342285-28342352)
chr7 (2-64)||(43187542-43187604)
chr7 (1-68)||(23101236-23101303)
chr7 (1-68)||(29614959-29615026)
chr7 (1-68)||(34695176-34695243)
chr7 (198-244)||(32883944-32883990)
chr7 (1-71)||(41827252-41827322)
chr7 (1-66)||(20275460-20275525)
chr7 (1-61)||(18914937-18914997)
chr7 (6-68)||(8078387-8078450)
chr7 (1-68)||(12963639-12963706)
chr7 (1-68)||(17001218-17001285)
chr7 (1-68)||(19251477-19251544)
chr7 (1-68)||(37327865-37327932)
chr7 (1-68)||(39784037-39784104)
chr7 (1-68)||(48117788-48117855)
chr7 (9-79)||(7113409-7113479)
chr7 (1-71)||(28034997-28035066)
chr7 (1-66)||(12893353-12893418)
chr7 (209-246)||(29893173-29893210)
chr7 (1-66)||(34695218-34695283)
chr7 (1-66)||(43581287-43581352)
chr7 (1-66)||(44343593-44343658)
chr7 (1-66)||(47879113-47879178)
chr7 (1-66)||(47914211-47914276)
chr7 (12-76)||(10616940-10617003)
chr7 (1-61)||(32143121-32143181)
chr7 (1-60)||(7718481-7718540)
chr7 (1-68)||(7993080-7993147)
chr7 (1-68)||(9882431-9882498)
chr7 (1-68)||(10068404-10068471)
chr7 (1-68)||(39028035-39028102)
chr7 (127-236)||(10617024-10617134)
chr7 (4-66)||(30440744-30440806)
chr7 (1-66)||(973129-973194)
chr7 (1-46)||(43187518-43187563)
chr7 (1-61)||(727457-727517)
chr7 (1-61)||(31638820-31638880)
chr7 (35-71)||(40097140-40097176)
chr7 (2-66)||(40996846-40996910)
[»] chr4 (101 HSPs)
chr4 (1-249)||(5441389-5441637)
chr4 (1-249)||(27768041-27768289)
chr4 (1-249)||(54341129-54341377)
chr4 (4-249)||(37828375-37828620)
chr4 (1-246)||(51320906-51321151)
chr4 (1-246)||(37915812-37916057)
chr4 (1-242)||(54853448-54853689)
chr4 (1-240)||(32322076-32322315)
chr4 (1-246)||(23987199-23987434)
chr4 (1-246)||(30967285-30967520)
chr4 (87-249)||(48261198-48261360)
chr4 (6-249)||(41725115-41725352)
chr4 (1-242)||(32683988-32684208)
chr4 (1-246)||(49501495-49501732)
chr4 (1-246)||(49507560-49507797)
chr4 (1-224)||(55302828-55303051)
chr4 (1-227)||(25331116-25331342)
chr4 (1-246)||(49834809-49835034)
chr4 (1-224)||(50018236-50018449)
chr4 (1-227)||(41881077-41881304)
chr4 (1-227)||(12112930-12113156)
chr4 (1-236)||(36479228-36479452)
chr4 (1-213)||(44770862-44771075)
chr4 (1-227)||(32950831-32951057)
chr4 (12-227)||(1112889-1113104)
chr4 (1-227)||(7007359-7007585)
chr4 (1-227)||(39479350-39479578)
chr4 (1-201)||(19740929-19741129)
chr4 (1-239)||(12913209-12913437)
chr4 (1-215)||(22202000-22202214)
chr4 (1-154)||(29649735-29649888)
chr4 (7-227)||(34228578-34228798)
chr4 (1-215)||(1044794-1045006)
chr4 (1-246)||(5799962-5800198)
chr4 (1-176)||(9163061-9163236)
chr4 (1-227)||(37046445-37046673)
chr4 (40-246)||(28483923-28484117)
chr4 (1-227)||(30009672-30009898)
chr4 (6-215)||(3436583-3436792)
chr4 (1-176)||(28541683-28541858)
chr4 (1-215)||(39307260-39307474)
chr4 (1-185)||(28370909-28371093)
chr4 (40-227)||(42786708-42786895)
chr4 (1-193)||(25446036-25446227)
chr4 (12-227)||(46635643-46635852)
chr4 (87-227)||(41320881-41321021)
chr4 (1-227)||(24130976-24131193)
chr4 (1-227)||(31314737-31314949)
chr4 (1-164)||(25504697-25504860)
chr4 (128-236)||(8711978-8712086)
chr4 (1-169)||(23464940-23465108)
chr4 (4-202)||(53275827-53276025)
chr4 (87-176)||(7249811-7249900)
chr4 (128-227)||(24736447-24736546)
chr4 (1-154)||(40537218-40537366)
chr4 (1-76)||(20021329-20021404)
chr4 (93-227)||(56445350-56445474)
chr4 (92-227)||(27454073-27454208)
chr4 (28-215)||(41581796-41581982)
chr4 (3-75)||(11090336-11090408)
chr4 (1-68)||(27767999-27768066)
chr4 (1-68)||(37915770-37915837)
chr4 (1-71)||(37915728-37915798)
chr4 (119-246)||(20021436-20021563)
chr4 (1-68)||(5441347-5441414)
chr4 (1-68)||(30967495-30967562)
chr4 (1-66)||(41881281-41881346)
chr4 (1-68)||(12913166-12913234)
chr4 (1-102)||(40537307-40537408)
chr4 (1-68)||(7249926-7249993)
chr4 (148-235)||(36727937-36728023)
chr4 (1-60)||(37828522-37828581)
chr4 (1-60)||(42786711-42786770)
chr4 (1-68)||(54341087-54341154)
chr4 (1-68)||(54853664-54853731)
chr4 (1-79)||(25504824-25504902)
chr4 (1-66)||(1044753-1044817)
chr4 (1-66)||(20021287-20021352)
chr4 (1-66)||(24131170-24131235)
chr4 (1-66)||(25331074-25331139)
chr4 (1-66)||(28541641-28541706)
chr4 (1-66)||(32951034-32951099)
chr4 (1-66)||(37046650-37046715)
chr4 (1-66)||(39479555-39479620)
chr4 (1-60)||(1112920-1112979)
chr4 (1-68)||(37828598-37828665)
chr4 (1-68)||(49835009-49835076)
chr4 (1-68)||(50018194-50018261)
chr4 (4-66)||(19741106-19741168)
chr4 (11-61)||(29855676-29855726)
chr4 (3-37)||(41320735-41320769)
chr4 (147-232)||(11090435-11090520)
chr4 (1-66)||(22201958-22202023)
chr4 (1-50)||(36728026-36728075)
chr4 (183-232)||(40537150-40537199)
chr4 (1-66)||(49469264-49469329)
chr4 (1-57)||(467826-467882)
chr4 (1-57)||(29649874-29649930)
chr4 (35-71)||(40143822-40143858)
chr4 (24-68)||(41320786-41320830)
chr4 (35-71)||(54509760-54509796)
[»] chr8 (63 HSPs)
chr8 (1-249)||(14782107-14782355)
chr8 (1-249)||(44725782-44726030)
chr8 (1-246)||(39467443-39467688)
chr8 (1-246)||(19717856-19718101)
chr8 (1-242)||(18958706-18958947)
chr8 (1-242)||(9288436-9288677)
chr8 (6-246)||(26856057-26856298)
chr8 (1-246)||(18305946-18306181)
chr8 (1-240)||(10295360-10295601)
chr8 (1-246)||(43166665-43166910)
chr8 (1-242)||(4403093-4403334)
chr8 (1-246)||(7466321-7466556)
chr8 (4-244)||(32497514-32497744)
chr8 (1-242)||(42305774-42306005)
chr8 (4-240)||(16362185-16362411)
chr8 (1-227)||(24501807-24502033)
chr8 (6-227)||(26374424-26374645)
chr8 (1-227)||(42938111-42938337)
chr8 (1-227)||(2704813-2705039)
chr8 (9-240)||(31623689-31623900)
chr8 (1-227)||(42735271-42735497)
chr8 (1-145)||(4031334-4031478)
chr8 (40-242)||(37857144-37857336)
chr8 (1-227)||(42937339-42937563)
chr8 (12-212)||(10392246-10392446)
chr8 (1-227)||(5576614-5576841)
chr8 (1-227)||(23115163-23115388)
chr8 (6-227)||(7506893-7507114)
chr8 (6-239)||(39189798-39190028)
chr8 (1-145)||(32711358-32711502)
chr8 (1-154)||(43959644-43959796)
chr8 (1-227)||(41479083-41479299)
chr8 (87-227)||(4950010-4950150)
chr8 (93-164)||(8410455-8410526)
chr8 (87-164)||(13478307-13478384)
chr8 (158-205)||(4031294-4031341)
chr8 (1-68)||(14782330-14782397)
chr8 (1-68)||(44726005-44726072)
chr8 (1-79)||(18958911-18958989)
chr8 (1-66)||(8543509-8543574)
chr8 (1-68)||(7466279-7466346)
chr8 (1-68)||(18306156-18306223)
chr8 (1-68)||(42305980-42306047)
chr8 (1-71)||(32497427-32497497)
chr8 (1-79)||(42735461-42735539)
chr8 (1-66)||(4031455-4031520)
chr8 (1-66)||(23115365-23115430)
chr8 (1-66)||(42938314-42938379)
chr8 (1-66)||(43959602-43959667)
chr8 (2-66)||(5576818-5576882)
chr8 (96-144)||(9770497-9770545)
chr8 (35-71)||(37567365-37567401)
chr8 (88-144)||(41070018-41070074)
chr8 (1-60)||(7507018-7507077)
chr8 (1-68)||(19718076-19718143)
chr8 (1-60)||(26374549-26374608)
chr8 (17-79)||(13478415-13478475)
chr8 (1-66)||(2705016-2705081)
chr8 (6-50)||(29930857-29930902)
chr8 (1-66)||(32711479-32711544)
chr8 (1-66)||(41479041-41479106)
chr8 (12-76)||(9770962-9771026)
chr8 (1-61)||(32497469-32497529)
[»] chr3 (100 HSPs)
chr3 (1-249)||(36674103-36674351)
chr3 (1-246)||(34484006-34484251)
chr3 (1-246)||(17946273-17946518)
chr3 (1-246)||(44906489-44906734)
chr3 (1-240)||(11431511-11431750)
chr3 (6-249)||(32580167-32580409)
chr3 (15-242)||(26107260-26107487)
chr3 (1-246)||(40897129-40897375)
chr3 (1-246)||(18749597-18749842)
chr3 (1-246)||(54628828-54629074)
chr3 (1-246)||(52810363-52810608)
chr3 (14-246)||(48379155-48379387)
chr3 (1-246)||(52617947-52618186)
chr3 (1-243)||(31646265-31646505)
chr3 (1-244)||(10728629-10728862)
chr3 (1-246)||(51737703-51737948)
chr3 (1-229)||(50903233-50903464)
chr3 (6-240)||(37454851-37455075)
chr3 (6-246)||(39038030-39038260)
chr3 (1-244)||(50762038-50762271)
chr3 (1-246)||(23753383-23753607)
chr3 (1-227)||(19253812-19254038)
chr3 (1-211)||(20832977-20833187)
chr3 (9-236)||(6035039-6035266)
chr3 (1-249)||(10660520-10660744)
chr3 (1-227)||(20498194-20498420)
chr3 (1-227)||(996081-996307)
chr3 (1-227)||(3999640-3999866)
chr3 (1-227)||(10139141-10139367)
chr3 (1-227)||(6589549-6589775)
chr3 (1-227)||(37820472-37820698)
chr3 (1-224)||(33807796-33808020)
chr3 (4-227)||(40246832-40247055)
chr3 (1-227)||(3206200-3206417)
chr3 (1-227)||(44762032-44762258)
chr3 (1-212)||(35337720-35337930)
chr3 (1-227)||(25418351-25418577)
chr3 (1-227)||(29448853-29449079)
chr3 (1-227)||(54625577-54625803)
chr3 (11-215)||(33996548-33996752)
chr3 (1-239)||(44276374-44276598)
chr3 (14-227)||(53929123-53929336)
chr3 (1-164)||(1440010-1440174)
chr3 (1-154)||(6975734-6975884)
chr3 (1-164)||(29029991-29030153)
chr3 (1-207)||(51699495-51699700)
chr3 (87-246)||(39842470-39842619)
chr3 (4-215)||(52114516-52114728)
chr3 (93-227)||(5825139-5825273)
chr3 (40-150)||(539476-539586)
chr3 (1-176)||(22057746-22057922)
chr3 (1-154)||(55235171-55235322)
chr3 (1-116)||(12103614-12103729)
chr3 (158-235)||(45862983-45863060)
chr3 (1-76)||(18749555-18749630)
chr3 (21-239)||(15492850-15493061)
chr3 (6-227)||(27899334-27899545)
chr3 (111-227)||(1439889-1440005)
chr3 (139-227)||(6131228-6131316)
chr3 (1-57)||(27240408-27240464)
chr3 (92-154)||(52080003-52080065)
chr3 (87-143)||(23535890-23535946)
chr3 (1-68)||(10660478-10660545)
chr3 (1-68)||(11431469-11431536)
chr3 (1-68)||(36674326-36674393)
chr3 (1-52)||(38772320-38772371)
chr3 (1-64)||(44276332-44276395)
chr3 (1-66)||(3206394-3206459)
chr3 (1-66)||(23753584-23753649)
chr3 (1-60)||(539524-539583)
chr3 (1-68)||(6131325-6131392)
chr3 (1-68)||(6131367-6131434)
chr3 (1-68)||(18749513-18749580)
chr3 (1-68)||(27240439-27240506)
chr3 (1-68)||(44906709-44906776)
chr3 (1-68)||(50903439-50903506)
chr3 (1-66)||(1440151-1440215)
chr3 (1-66)||(10139344-10139409)
chr3 (1-66)||(19253770-19253835)
chr3 (1-66)||(35337678-35337743)
chr3 (1-66)||(37820675-37820740)
chr3 (7-68)||(44276296-44276357)
chr3 (1-66)||(44762235-44762300)
chr3 (3-68)||(54628788-54628853)
chr3 (1-102)||(996248-996348)
chr3 (1-61)||(6589507-6589567)
chr3 (2-66)||(12103574-12103637)
chr3 (4-68)||(40897090-40897154)
chr3 (1-68)||(2024150-2024217)
chr3 (1-68)||(31646480-31646547)
chr3 (1-68)||(50762246-50762313)
chr3 (1-68)||(52618161-52618228)
chr3 (1-60)||(53929248-53929307)
chr3 (8-66)||(33807997-33808055)
chr3 (1-66)||(20498152-20498217)
chr3 (183-224)||(33807678-33807719)
chr3 (1-66)||(40246787-40246852)
chr3 (35-71)||(27593198-27593234)
chr3 (35-71)||(36786017-36786053)
chr3 (35-71)||(39338299-39338335)
[»] chr1 (79 HSPs)
chr1 (2-249)||(51701560-51701807)
chr1 (1-249)||(6312553-6312801)
chr1 (1-249)||(25612136-25612384)
chr1 (4-246)||(29396364-29396606)
chr1 (1-246)||(15835029-15835274)
chr1 (6-249)||(9322473-9322716)
chr1 (1-246)||(28387369-28387614)
chr1 (1-246)||(46328021-46328266)
chr1 (4-242)||(48177442-48177680)
chr1 (1-246)||(38536075-38536310)
chr1 (1-246)||(38558293-38558528)
chr1 (1-242)||(18798470-18798691)
chr1 (1-239)||(29219267-29219493)
chr1 (5-215)||(35279655-35279865)
chr1 (1-225)||(35679125-35679349)
chr1 (1-236)||(9577418-9577653)
chr1 (1-227)||(19451803-19452029)
chr1 (6-224)||(21222131-21222349)
chr1 (1-227)||(28824368-28824593)
chr1 (4-227)||(50192545-50192769)
chr1 (1-211)||(5495117-5495317)
chr1 (1-144)||(49230865-49231008)
chr1 (1-227)||(49198264-49198489)
chr1 (1-227)||(45760004-45760231)
chr1 (1-227)||(47780690-47780916)
chr1 (7-227)||(6304247-6304468)
chr1 (4-246)||(45272569-45272799)
chr1 (6-237)||(48668770-48668988)
chr1 (1-215)||(49418063-49418277)
chr1 (2-227)||(37014635-37014860)
chr1 (1-202)||(45535923-45536124)
chr1 (6-227)||(47654346-47654568)
chr1 (4-212)||(32588963-32589171)
chr1 (1-227)||(29556083-29556310)
chr1 (1-176)||(730127-730303)
chr1 (90-215)||(31572204-31572329)
chr1 (1-193)||(48524298-48524490)
chr1 (1-107)||(8141243-8141349)
chr1 (12-154)||(33025502-33025645)
chr1 (1-145)||(47784366-47784509)
chr1 (1-68)||(953798-953865)
chr1 (95-154)||(955823-955882)
chr1 (1-109)||(22183349-22183457)
chr1 (87-164)||(51085860-51085937)
chr1 (1-50)||(14494188-14494237)
chr1 (1-68)||(6312511-6312578)
chr1 (1-68)||(15835249-15835316)
chr1 (1-68)||(19452046-19452113)
chr1 (90-145)||(31622536-31622591)
chr1 (1-66)||(28824570-28824635)
chr1 (1-66)||(49198466-49198530)
chr1 (4-68)||(25612097-25612161)
chr1 (1-60)||(21222168-21222227)
chr1 (1-68)||(29219225-29219292)
chr1 (1-66)||(730085-730150)
chr1 (1-66)||(953756-953821)
chr1 (3-68)||(18798430-18798495)
chr1 (1-66)||(19452006-19452071)
chr1 (1-66)||(29556041-29556106)
chr1 (1-66)||(35679326-35679391)
chr1 (109-154)||(43885158-43885203)
chr1 (1-66)||(50192749-50192814)
chr1 (1-68)||(8141324-8141391)
chr1 (1-60)||(29396508-29396567)
chr1 (1-68)||(29396584-29396651)
chr1 (1-60)||(37014760-37014819)
chr1 (1-68)||(49230823-49230890)
chr1 (1-68)||(51701517-51701584)
chr1 (1-60)||(51701601-51701660)
chr1 (4-66)||(14494149-14494211)
chr1 (34-71)||(10896845-10896882)
chr1 (1-66)||(22183307-22183372)
chr1 (1-66)||(28387591-28387656)
chr1 (1-66)||(35279609-35279674)
chr1 (1-66)||(45760208-45760273)
chr1 (35-71)||(1928406-1928442)
chr1 (183-215)||(33025664-33025696)
chr1 (35-71)||(36402293-36402329)
chr1 (1-61)||(48177665-48177725)
[»] chr6 (30 HSPs)
chr6 (1-249)||(31895681-31895929)
chr6 (1-242)||(14262412-14262653)
chr6 (1-246)||(34759025-34759271)
chr6 (1-215)||(34773394-34773608)
chr6 (9-246)||(7497069-7497305)
chr6 (1-246)||(30385044-30385277)
chr6 (1-227)||(6197472-6197698)
chr6 (1-215)||(2300744-2300958)
chr6 (90-249)||(31067567-31067716)
chr6 (1-227)||(1391609-1391835)
chr6 (1-215)||(7051830-7052044)
chr6 (107-249)||(4200409-4200541)
chr6 (1-227)||(29076583-29076810)
chr6 (1-227)||(29111556-29111784)
chr6 (1-207)||(28002650-28002856)
chr6 (4-154)||(3848200-3848347)
chr6 (7-116)||(656957-657065)
chr6 (1-68)||(31895639-31895706)
chr6 (1-68)||(34773352-34773419)
chr6 (1-61)||(3848107-3848167)
chr6 (4-68)||(14262628-14262692)
chr6 (1-60)||(7497103-7497162)
chr6 (1-66)||(1391567-1391632)
chr6 (1-66)||(2300935-2301000)
chr6 (183-227)||(2238678-2238722)
chr6 (1-58)||(656992-657049)
chr6 (1-71)||(3848149-3848225)
chr6 (1-66)||(6197675-6197740)
chr6 (35-71)||(10644016-10644052)
chr6 (35-71)||(30877898-30877934)
[»] chr5 (38 HSPs)
chr5 (4-249)||(14000077-14000322)
chr5 (1-246)||(1152078-1152323)
chr5 (1-246)||(13925917-13926162)
chr5 (1-232)||(4550246-4550477)
chr5 (4-249)||(4240434-4240669)
chr5 (42-246)||(39852372-39852576)
chr5 (15-246)||(7947548-7947779)
chr5 (1-246)||(40013687-40013922)
chr5 (1-246)||(5949095-5949329)
chr5 (2-244)||(1461125-1461357)
chr5 (1-227)||(21147053-21147279)
chr5 (1-227)||(22746283-22746501)
chr5 (1-245)||(37013900-37014124)
chr5 (1-215)||(5272925-5273139)
chr5 (1-227)||(33656035-33656263)
chr5 (1-215)||(139259-139473)
chr5 (1-215)||(7016745-7016959)
chr5 (1-227)||(27458944-27459169)
chr5 (1-224)||(32157891-32158118)
chr5 (1-176)||(6460778-6460953)
chr5 (10-169)||(14465279-14465438)
chr5 (40-202)||(849172-849334)
chr5 (9-227)||(9689654-9689869)
chr5 (12-156)||(9220772-9220916)
chr5 (1-66)||(5273116-5273181)
chr5 (4-68)||(16894055-16894119)
chr5 (1-68)||(4550452-4550519)
chr5 (4-71)||(5273153-5273220)
chr5 (1-68)||(14000300-14000367)
chr5 (1-68)||(37013858-37013925)
chr5 (1-68)||(40013897-40013964)
chr5 (1-66)||(33656240-33656305)
chr5 (4-68)||(1152298-1152362)
chr5 (1-60)||(14000224-14000283)
chr5 (1-66)||(21147011-21147076)
chr5 (1-66)||(27459146-27459211)
chr5 (1-49)||(9220837-9220885)
chr5 (1-66)||(32158095-32158161)
[»] scaffold0543 (2 HSPs)
scaffold0543 (1-246)||(10546-10791)
scaffold0543 (1-68)||(10504-10571)
[»] chr2 (62 HSPs)
chr2 (1-246)||(28844542-28844787)
chr2 (12-248)||(18177265-18177501)
chr2 (1-246)||(10657393-10657638)
chr2 (1-249)||(26788771-26789018)
chr2 (1-246)||(33135610-33135854)
chr2 (7-244)||(25288152-25288389)
chr2 (1-242)||(28740275-28740506)
chr2 (12-246)||(3463669-3463894)
chr2 (1-246)||(13833410-13833645)
chr2 (1-227)||(16269678-16269904)
chr2 (1-227)||(24776342-24776568)
chr2 (1-154)||(7026591-7026744)
chr2 (1-227)||(12407367-12407593)
chr2 (1-227)||(20605223-20605449)
chr2 (1-227)||(31170621-31170847)
chr2 (1-227)||(14198574-14198800)
chr2 (1-227)||(22551760-22551986)
chr2 (1-227)||(43847633-43847859)
chr2 (1-246)||(6224545-6224771)
chr2 (1-227)||(5093044-5093270)
chr2 (1-227)||(35317049-35317275)
chr2 (1-225)||(305464-305688)
chr2 (1-246)||(215216-215448)
chr2 (1-215)||(32125237-32125454)
chr2 (104-246)||(43078653-43078795)
chr2 (1-246)||(378924-379159)
chr2 (1-145)||(3574834-3574978)
chr2 (1-176)||(44765762-44765937)
chr2 (1-239)||(10125285-10125515)
chr2 (1-202)||(1789429-1789630)
chr2 (7-227)||(9120119-9120339)
chr2 (181-249)||(7027054-7027122)
chr2 (1-154)||(26601270-26601423)
chr2 (1-68)||(20605139-20605206)
chr2 (87-143)||(21370631-21370687)
chr2 (158-236)||(3574971-3575049)
chr2 (1-66)||(12407325-12407390)
chr2 (1-68)||(7026549-7026616)
chr2 (1-68)||(26788729-26788796)
chr2 (1-79)||(13833609-13833687)
chr2 (1-66)||(24776300-24776365)
chr2 (1-68)||(215423-215490)
chr2 (1-68)||(28844500-28844567)
chr2 (1-66)||(16269636-16269701)
chr2 (1-66)||(20605097-20605162)
chr2 (1-66)||(20605181-20605246)
chr2 (1-66)||(22551963-22552028)
chr2 (1-61)||(14198782-14198841)
chr2 (1-61)||(32125195-32125255)
chr2 (4-70)||(19145013-19145082)
chr2 (1-68)||(28740481-28740548)
chr2 (1-68)||(33135568-33135635)
chr2 (4-66)||(5093247-5093309)
chr2 (1-35)||(43078620-43078654)
chr2 (1-66)||(1789387-1789452)
chr2 (158-195)||(7026738-7026775)
chr2 (1-46)||(8172165-8172210)
chr2 (1-66)||(31170824-31170889)
chr2 (1-66)||(35317007-35317072)
chr2 (1-66)||(44765720-44765785)
chr2 (35-71)||(11534881-11534917)
chr2 (35-71)||(34028935-34028971)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-246)||(39593-39838)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-246)||(13868-14103)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-246)||(21224-21459)
scaffold0152 (127-246)||(28463-28573)
[»] scaffold1504 (2 HSPs)
scaffold1504 (1-246)||(849-1091)
scaffold1504 (4-68)||(810-874)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-246)||(58052-58297)
[»] scaffold0400 (2 HSPs)
scaffold0400 (1-227)||(15028-15254)
scaffold0400 (4-66)||(15231-15293)
[»] scaffold0365 (2 HSPs)
scaffold0365 (1-227)||(15671-15897)
scaffold0365 (4-66)||(15874-15936)
[»] scaffold0922 (2 HSPs)
scaffold0922 (1-152)||(4186-4337)
scaffold0922 (1-68)||(4144-4211)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-215)||(100197-100411)
[»] scaffold0054 (2 HSPs)
scaffold0054 (40-224)||(36905-37089)
scaffold0054 (1-60)||(37027-37086)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-227)||(38890-39116)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-227)||(102079-102307)
[»] scaffold0839 (1 HSPs)
scaffold0839 (116-246)||(3668-3798)
[»] scaffold0151 (2 HSPs)
scaffold0151 (40-227)||(38600-38786)
scaffold0151 (1-60)||(38724-38783)
[»] scaffold0276 (2 HSPs)
scaffold0276 (1-232)||(529-760)
scaffold0276 (1-66)||(737-802)
[»] scaffold0347 (1 HSPs)
scaffold0347 (147-246)||(14892-14991)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-73)||(233723-233795)
scaffold0010 (1-73)||(234571-234643)
scaffold0010 (1-73)||(222555-222627)
[»] scaffold0007 (1 HSPs)
scaffold0007 (95-170)||(199905-199980)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-46)||(8748-8793)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 102)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 23101278 - 23101526
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  23101278 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 23101377  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  23101378 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 23101477  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101478 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 23101526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 28342327 - 28342575
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||       ||||||||||||||    
T  28342327 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattc 28342426  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  28342427 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 28342526  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342527 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 28342575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 39784079 - 39784326
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  39784079 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 39784178  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  39784179 aaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 39784278  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatcttt 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784279 aagatgagatttcttgagattgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 29614984 - 29614736
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||| |||||    
T  29614984 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattc 29614885  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  29614884 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 29614785  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29614784 aagatgagatttcttgagattatttttattttaaaagttactatctttt 29614736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 3022906 - 3023151
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||||| ||       ||||||||||||||    
T  3022906 aagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattc 3023005  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||    
T  3023006 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaa 3023105  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  3023106 aagatgagatttcttgagattgtttttcttttaaaagttagtatct 3023151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9882456 - 9882212
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  9882456 aagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 9882357  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||    
T  9882356 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aa 9882258  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    || |||||||||||||||||||||||| |||||||||||| |||||    
T  9882257 aaaatgagatttcttgagattgtttttcttttaaaagttattatct 9882212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 18838374 - 18838614
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||  ||       |||||||||||||||||||    
T  18838374 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaat 18838473  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  18838474 cattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 18838573  T
Q  206 gagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  18838574 gagatttcttgagattgtttttcttttaaaagttactatct 18838614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28035025 - 28034780
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||| ||       ||||||||||||||    
T  28035025 aagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 28034926  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||||    
T  28034925 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaa 28034826  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  28034825 aagatgagatttcttgagattgtttttcttttacaagttactatct 28034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7993122 - 7993367
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| || ||||||||||| ||       ||||| ||||||||    
T  7993122 aagtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattc 7993221  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||||    
T  7993222 aaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 7993321  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7993322 aagataagatttcttgagattgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 33382621 - 33382862
Alignment:
Q  5 cttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||  ||||||||||||    
T  33382621 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaa 33382720  T
Q  105 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaaga 204  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||    
T  33382721 tcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaaga 33382820  T
Q  205 tgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||| || ||||||||||| |||||||| |||||||||    
T  33382821 tgagatttatttagattgtttttcttttaaaatttactatct 33382862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 509636 - 509874
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  509636 aagtcttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 509735  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||          |||||||||||||  |||| || ||||||||||||||||||||    
T  509736 aaaatcattcaaatttcgaacgattgtttaataaattggattttgat----------ggattttgtagtgggattttaacaagaaaaagtctttcatgaa 509825  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  509826 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 509874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 8675326 - 8675557
Alignment:
Q  14 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 113  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  114 tttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttc 213  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  214 ttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||| |||| |||||||||||||    
T  8675526 ttgagattgtttttctttt-aaagttactatct 8675557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 12740353 - 12740593
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| ||||||||||||       |||| |||||||||    
T  12740353 aagtcttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattc 12740452  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||| || |||| |||||||||||| ||    
T  12740453 aaaatcattcaaatttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaa 12740551  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    ||||||||||||||| ||||||||||  ||||||||||||||    
T  12740552 aagatgagatttcttaagattgttttacttttaaaagttact 12740593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 44122115 - 44121885
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||        ||||||||||||||||||    
T  44122115 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaat 44122016  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||| ||||||||||    
T  44122015 cattcaaatttcgaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttaatgaaaagat 44121926  T
Q  206 gagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  44121925 gagattttttgagattgtttttcttttaaaagttactatct 44121885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 40460925 - 40460692
Alignment:
Q  3 gtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaa 102  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||       ||||||||||||||||    
T  40460925 gtcttgtgatattcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 40460826  T
Q  103 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||          |||||||||||||||| || |||||||| |||||||||||||    
T  40460825 aatcattcaaatttcgaatgattgtttaataaattggattttgatgga----------ttttgtagtgtaattttaacaagaaaaaatctttcatgaaaa 40460736  T
Q  203 gatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
     |||||||||||||||||||||||| ||||||||||||||||||    
T  40460735 tatgagatttcttgagattgtttttcttttaaaagttactatct 40460692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 37327907 - 37328142
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||       ||||||||||||||    
T  37327907 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattc 37328006  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||          |||||||||||| |||||| || || |||||||||||||||||    
T  37328007 aaaatcattcaaatttcaaaggattgtttaataaattgaattttgat----------ggattttgtagtataattttaacaaaaaaaagtctttcatgaa 37328096  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||    
T  37328097 aagataagattttttgagattgtttttcttttaaaagttactatct 37328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 46405648 - 46405416
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||||||||    
T  46405648 tcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 46405549  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    |||||||||||||| || |||||||||||||||||||||||||||||          |||||| ||||||||| || |||||||||| ||| || |||||    
T  46405548 atcattcaaatttcaaatgattgtttaataaattggattttgatgga----------ttttgtggtgtaattttaacaagaaaaagtatttaataaaaag 46405459  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  46405458 atgagatttcttgagattgtttttcttttaaaagttactatct 46405416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 29585495 - 29585725
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||       ||||| ||||||||    
T  29585495 aagttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattc 29585593  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||          ||||||||||||||| || ||||||||||||||||| ||    
T  29585594 aaaatcattcaaattttgaaggattgtttaataatttggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaa 29585683  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  29585684 aagatgaaatttcttgagattgtttttcttttaaaagttact 29585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 41827294 - 41827529
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| |||||||||||| | ||       ||||||||||||||    
T  41827294 aagtcttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattc 41827393  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||          | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||||| ||||||||||||    
T  41827394 aaaat----------ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaa 41827483  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    || |||||||||||||||||||||||| ||||||||||||||||||    
T  41827484 aatatgagatttcttgagattgtttttcttttaaaagttactatct 41827529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44256986 - 44256741
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||| ||||| |||||||| | ||||||||||||||||| |||| ||||||||||| |||||||||||||| ||       || | |||||||||    
T  44256986 aagtcttgtagtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattc 44256887  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | |||||||| |||||||||| || |||||||||| |||||| ||    
T  44256886 aaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaa 44256787  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    || ||||||||| |||||||||||||| |||||||||||| |||||    
T  44256786 aatatgagattttttgagattgtttttcttttaaaagttattatct 44256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 39028080 - 39028312
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||       |||||||| ||||||||    
T  39028080 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaa 39028179  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||| |||||||| |||| ||||||||||||||||||||||||||          |||||||||||||||| || || |||||||||| |||||||||||     
T  39028180 atcgttcaaattacgaaagattgtttaataaattggattttgat----------ggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaa 39028269  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatct 246  Q
      |||||||||||||||||||||| ||||||||||||||||||    
T  39028270 cagagatttcttgagattgtttttcttttaaaagttactatct 39028312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 32883762 - 32883948
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||    
T  32883762 aagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattc 32883861  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaa 187  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| || |||||||    
T  32883862 aaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 47914253 - 47914479
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||| |||||| || |||| ||       |||| ||| |||||    
T  47914253 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattc 47914352  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  47914353 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 47914452  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  47914453 aacatgagatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 12963681 - 12963911
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| ||||||| | ||       |||| ||||||| |    
T  12963681 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatcc 12963780  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||  |       
T  12963781 aaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt--- 12963877  T
Q  201 aagatgagatttcttgagattgtttttattttaaaa 236  Q
       |||||||||||||||||||||||| ||||||||    
T  12963878 --catgagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 973171 - 973397
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        | | |||||||||    
T  973171 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattc 973270  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||||||    
T  973271 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaa 973370  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  973371 aacatgagatttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 30440783 - 30441009
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  30440783 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 30440882  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||| ||||    
T  30440883 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaa 30440982  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  30440983 aacatgagatttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43581310 - 43581096
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||| || |||| ||       |||| |||||||||    
T  43581310 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 43581211  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  43581210 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 43581111  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  43581110 aacatgagatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10068446 - 10068682
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtctt-gaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||| |||| ||||||||| ||       |||||||||||||    
T  10068446 aagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtatt 10068545  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| |||||| |    
T  10068546 caaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataa 10068645  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaa 236  Q
    ||| ||||||||| ||  |||||||||| ||||||||    
T  10068646 aaacatgagatttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 40996869 - 40996643
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||  ||       |||| |||||||||    
T  40996869 aagtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattc 40996770  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||| |  | ||||||||||||||||||    
T  40996769 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaa 40996670  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  40996669 aacatgagatttcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7719480 - 7719254
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| ||| |||||||||| |||||||||||| |||||||||| |||||| || |||| ||        ||| |||||||||    
T  7719480 aagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattc 7719381  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  7719380 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 7719281  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  7719280 aacatgagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12893395 - 12893621
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||| || |||| ||       ||||  ||||||||    
T  12893395 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattc 12893494  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||| || |||||| ||||| ||||| |  | ||||||||||||||||||    
T  12893495 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaa 12893594  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  12893595 aacatgagatttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18914955 - 18914729
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| |||||||||| ||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  18914955 aagtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 18914856  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  18914855 aaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 18914756  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  18914755 aacatgagatttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34695260 - 34695486
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||| ||| |||||||||| |||||| || |||| ||       |||  |||||||||    
T  34695260 aagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattc 34695359  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  34695360 aaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 34695459  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  34695460 aacatgagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44343616 - 44343390
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||| |||||| || |||| ||       || | ||||||||     
T  44343616 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtattt 44343517  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||| |||    
T  44343516 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaa 44343417  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  44343416 aacatgagatttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 47879155 - 47879381
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||| |||||| || |||| ||       |||| ||| |||||    
T  47879155 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattc 47879254  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||  ||||||||||||||||||  |||||||||||||||| ||| ||||| ||||| ||||| |  | ||||||||||||||||||    
T  47879255 aaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 47879354  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  47879355 aacatgagatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 19251519 - 19251672
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||| ||       |||| |||||||||    
T  19251519 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattc 19251618  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19251619 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 37972981 - 37972842
Alignment:
Q  107 attcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatg 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  207 agatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||| ||||||||||||||||| |||||||||||| |||||    
T  37972881 agacttcttgagattgtttttcttttaaaagttattatct 37972842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 33892461 - 33892269
Alignment:
Q  10 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 109  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||||||||||||||    
T  33892461 ggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcatt 33892362  T
Q  110 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 209  Q
    ||||||||||| ||||||| ||||||||||||||| ||          | ||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  33892361 caaatttcgaatgattgttaaataaattggatttttat----------gaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgaga 33892272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 20275483 - 20275269
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||| | |||||||||||||||| ||||||||| |||||||||||  |||||||||| |||||| || |||| ||       ||||| ||||||||    
T  20275483 aagtcttgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattc 20275384  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||| |||||||    
T  20275383 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaa 20275284  T
Q  201 aagatgagatttctt 215  Q
    |  ||||||||||||    
T  20275283 agcatgagatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 17001243 - 17001099
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||        | | |||||||||    
T  17001243 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattc 17001144  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17001143 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  34 attttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 133  Q
    |||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  134 aattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    |||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34008999 - 34009226
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtctt-gtggtatt 99  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||| || ||| || |||| ||       ||| | ||||||||    
T  34008999 aagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtatt 34009098  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| || |  ||||| |  |  ||||||||||||| ||    
T  34009099 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaaga 34009198  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||||||  ||||||||||    
T  34009199 aaacatgagatttcttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 43187485 - 43187339
Alignment:
Q  93 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtct 192  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| | ||||||| ||||| ||||| || ||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  193 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 239  Q
    |||||||| | ||||||||| ||| |||||||||| |||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 3797266 - 3797129
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||||||| |||||| |    
T  3797266 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaa 3797167  T
Q  112 aatttcgaaggattgtttaataaattggattttgatgg 149  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  3797166 aattttgaaggattgtttaataaattagattttgatgg 3797129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 47066683 - 47066828
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| || |  |||||||| ||        |||||||||||||    
T  47066683 aagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtatt 47066782  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47066783 caaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 10676637 - 10676477
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    |||||||||||| |||||||| ||||||  |||| ||||| |||||| |||||||||| |||||||||||||| ||       ||||  | |||||||||    
T  10676637 tcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaa 10676538  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  10676537 atcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaatttt 10676477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 32143139 - 32142911
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn--gtcttgtggtat 98  Q
    |||||||||| |||||||| ||  || |||||||||| |||||||||||  |||||| ||| |||||| || |||| ||         |||  |||||||    
T  32143139 aagtcttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtat 32143040  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||| |||     
T  32143039 tcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccata 32142940  T
Q  199 aaaagatgagatttcttgagattgttttt 227  Q
    |||| |||||||||||| |||||||||||    
T  32142939 aaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 39219597 - 39219371
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||||||||||||||||| |||||   |||| |||||| |||||| | |||||||| |||||| || |||| ||       ||||  |||||||    
T  39219597 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtatt 39219498  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    ||||||||||||||||| || | ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |    
T  39219497 caaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataa 39219399  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||||||  ||||||||||    
T  39219398 aaacatgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7113443 - 7113665
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||| |||||| ||| |||||| |||||||| ||| ||||||||||    |||||| |||| ||       |||  |||||||||    
T  7113443 aagtcttgtgttattcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattc 7113538  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| |||||||||||| |||||||||||||||||  ||||||||| |||||| ||||||||| |||   ||||| |  | ||||||||||||||||||    
T  7113539 aaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaa 7113638  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||| |||||||  ||||||||||    
T  7113639 aacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 31638862 - 31639015
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| |||||||||||||| |||||| |  || ||||||| || |||||| || |||| ||       |||| |||||||||    
T  31638862 aagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattc 31638961  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31638962 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 12 - 227
Target Start/End: Original strand, 9179871 - 9180076
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    |||||||||||||||||||||||||| |||||||| |||  ||||||||| |||||| ||||||| ||       |||||||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  112 aatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 211  Q
    |||| |||||||||||||||||||||||||||||          ||||||||| ||||| | ||| |  |  ||||||||||||||||||| ||||||||    
T  9179971 aattccgaaggattgtttaataaattggattttg----------tgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatt 9180060  T
Q  212 tcttgagattgttttt 227  Q
    ||||  ||||||||||    
T  9180061 tcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 25805675 - 25805835
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    |||||||| |||||||||||||||||||| |||| |||||| ||| | |||||||||| || | ||||||||| ||          ||||||||||||||    
T  25805675 tcttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaa 25805774  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  25805775 atcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggatttt 25805835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 43679492 - 43679576
Alignment:
Q  92 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 43679576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29893061 - 29893177
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||| ||       ||||||| |||||     
T  29893061 aagtcttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtattt 29893160  T
Q  101 aaaatcattcaaatttc 117  Q
    ||||| |||||||||||    
T  29893161 aaaataattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 44623491 - 44623352
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||| |||||| ||| |||||| ||||||| ||       |||| ||| ||||||||||    
T  44623491 ttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaat 44623392  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    |||||| ||||| || || |||||||||||||| ||||||    
T  44623391 cattcatatttctaaagactgtttaataaattgaattttg 44623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 727499 - 727653
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatca-tttnnnnnnngtcttgtggtatt 99  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||| | |||||||| || ||| || |||| ||         ||| || |||||    
T  727499 aagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtatt 727598  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||  |||||||    
T  727599 caaaatcattcaaatttcaaaggattgtttaataaatcagattttgtgggatttt 727653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48117813 - 48117746
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  48117813 aagtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  90 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 151  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 1470448 - 1470291
Alignment:
Q  5 cttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 104  Q
    |||||| |||||||| |||| | |||||||||| |||||||||||| | ||||||||  | ||||||||||||||       || |||||||||||||||    
T  1470448 cttgtgctattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaa 1470350  T
Q  105 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    || |||||||||  ||| |||||||||| |||| ||||||||| | |||| |||||||||    
T  1470349 tcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 17001106 - 17001037
Alignment:
Q  158 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||||||||||  || |||||||||||||||||||||| |||||||||||||| |||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 228
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  96 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttc 195  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||          ||| ||||| ||||| ||||| |  |  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttg----------tggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  196 atgaaaagatgagatttcttgagattgttttta 228  Q
    ||||||| |||||||||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 47066821 - 47066881
Alignment:
Q  158 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgag 218  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||    
T  47066821 ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttgag 47066881  T

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Target: chr7; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28342285 - 28342352
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||||| ||||  |||| |||||||||||| |||||||||| ||||||    
T  28342285 aagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 28342352  T

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Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 43187604 - 43187542
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaa 64  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||  |||||||||||||    
T  43187604 agtcttgtggtattcaatcaagactctttgtaatttaaaaaaagtcttatggtattcaattaa 43187542  T

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Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23101236 - 23101303
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  23101236 aagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 23101303  T

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Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29615026 - 29614959
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  29615026 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 29614959  T

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Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34695176 - 34695243
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| |||||||||| ||||||    
T  34695176 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 34695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 32883944 - 32883990
Alignment:
Q  198 gaaaagatgagatttcttgagattgtttttattttaaaagttactat 244  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaagttactat 32883990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41827252 - 41827322
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| |||||||||    
T  41827252 aagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttt 41827322  T

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Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20275525 - 20275460
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||||||||||||   |||| |||||||||||| | |||||||| ||||    
T  20275525 aagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgggttattcaatcaaga 20275460  T

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Target: chr7; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18914997 - 18914937
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| | ||||||||    
T  18914997 aagtcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaat 18914937  T

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Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 8078387 - 8078450
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaa-agtcttgaggtattcaattaagact 68  Q
    ||||| |||||||||||||||||||||||||| ||||| | ||||| |||||||||| ||||||    
T  8078387 ttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

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Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12963639 - 12963706
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||||||| |||||||||| ||||||  | || |||||||||||| |||||||||| ||||||    
T  12963639 aagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 12963706  T

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Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17001285 - 17001218
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  17001285 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 17001218  T

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Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19251477 - 19251544
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||| |||||||||||||| ||||||  | || |||||||||||| |||||||||| ||||||    
T  19251477 aagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 19251544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37327865 - 37327932
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  37327865 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 37327932  T

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Target: chr7; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39784037 - 39784104
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||| |||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  39784037 aagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 39784104  T

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Target: chr7; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48117855 - 48117788
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  48117855 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 48117788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7113409 - 7113479
Alignment:
Q  9 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcattt 79  Q
    |||||||||||||||| |||||   |||| |||||||||||| | ||||||||||||| |||| |||||||    
T  7113409 tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattttttatcattt 7113479  T

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Target: chr7; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28035066 - 28034997
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||| |||||||||||||| |||||| |||| ||  |||||||||||||| |||||||||| |||||||||    
T  28035066 aagttttgtggtattcaattaagattttttg-caacttaaaaaagtcttgtggtattcaatcaagactttt 28034997  T

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Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12893353 - 12893418
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  12893353 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 12893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 29893173 - 29893210
Alignment:
Q  209 atttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatct 29893210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34695218 - 34695283
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  34695218 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 34695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43581352 - 43581287
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  43581352 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 43581287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44343658 - 44343593
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  44343658 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 44343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47879113 - 47879178
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||| | |||||   ||||||||||||||||| | |||||||| ||||    
T  47879113 aagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaaga 47879178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47914211 - 47914276
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||| | |||||   ||||||||||||||||| | |||||||| ||||    
T  47914211 aagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaaga 47914276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 10616940 - 10617003
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatca 76  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| || |||| ||| |||||    
T  10616940 tattcaat-aagattatttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatca 10617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32143181 - 32143121
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||||| ||||||||||||| ||||| | |||| |||||||||||| | ||||||||    
T  32143181 aagtcttgtgatattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaat 32143121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7718540 - 7718481
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||||    
T  7718540 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7718481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7993080 - 7993147
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||| | |||||||||| ||||||    
T  7993080 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctcgtggtattcaatcaagact 7993147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9882498 - 9882431
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||| |||||||||||||||| | ||||  |||| |||||||| ||| |||||||||| ||||||    
T  9882498 aagtcttatggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagact 9882431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10068404 - 10068471
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| ||||||||||| | ||||||  |||| |||||||||||| |||||| ||| ||||||    
T  10068404 aagtcttgtgatattcaatcaaaactctttgcaatttaaaaaaagtcttgtggtatttaatcaagact 10068471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39028035 - 39028102
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||| ||||| |||||||||| ||||||    
T  39028035 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagact 39028102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 10617024 - 10617134
Alignment:
Q  127 tttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat-gagatttcttgagattgttt 225  Q
    ||||||||||| |||||||||||||||| || |||||| |||||  |||| |  || || ||||||||||| |||| ||  |||||| ||| ||||| ||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgctt 10617123  T
Q  226 ttattttaaaa 236  Q
    || ||||||||    
T  10617124 ttcttttaaaa 10617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 30440744 - 30440806
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  30440744 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 30440806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 973129 - 973194
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||| ||||    
T  973129 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 973194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43187563 - 43187518
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagt 46  Q
    ||||||| ||||||||||| || | |||||||||||||||||||||    
T  43187563 aagtcttatggtattcaattaaaactctttgtcattttaaaaaagt 43187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 727457 - 727517
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||| ||||||||||||||| |||||   |||| |||||||||||| | ||||||||    
T  727457 aagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaat 727517  T

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Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31638820 - 31638880
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    ||||| |||||||||||||||||| |||||   |||| |||||||||||| | ||||||||    
T  31638820 aagtcatgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaat 31638880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 40996910 - 40996846
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||||| |||||   |||| |||||||||| | | |||||||| ||||    
T  40996910 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctcgtgttattcaatcaaga 40996846  T

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Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 5441389 - 5441637
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  5441389 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 5441488  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  5441489 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 5441588  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441589 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 5441637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 27768041 - 27768289
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  27768041 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 27768140  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  27768141 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 27768240  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768241 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 27768289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 54341129 - 54341377
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  54341129 aagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 54341228  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  54341229 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 54341328  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54341329 aagatgagatttcttgagattgtttttattttaaaagttactatttttt 54341377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 37828620 - 37828375
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||       |||||||||||||||||    
T  37828620 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaa 37828521  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  37828520 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaag 37828421  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  37828420 atgagatttcttgagattgtttttattttaaaaattactatctttt 37828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 51320906 - 51321151
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  51320906 aagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 51321005  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| || |||||||||| |||||||||    
T  51321006 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaa 51321105  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  51321106 aagatgagatttcttgagattgtttttcttttaaaagttactatct 51321151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 37915812 - 37916057
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  37915812 aagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 37915911  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||| ||||||||    
T  37915912 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaa 37916011  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||    
T  37916012 aagataagatttattgagattgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 54853689 - 54853448
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||| ||       ||||||||||||||    
T  54853689 aagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 54853590  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||    
T  54853589 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 54853490  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  54853489 aagatgagatttcttgagattgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32322076 - 32322315
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       ||||||||||||||    
T  32322076 aagtcatgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattc 32322175  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||| ||    
T  32322176 aaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaa 32322275  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagtta 240  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  32322276 aagatgagatttcttgagattgtttttcttttaatagtta 32322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23987199 - 23987434
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||| ||       ||||||||||||||    
T  23987199 aagtcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattc 23987298  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| || ||||||||||||||||||||    
T  23987299 aaaatcattcaaatttcgaaggattgtttaataaattagattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 23987388  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  23987389 aagatgagatttcttgagattgtttttcttttaaaagttactatct 23987434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30967520 - 30967285
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||       ||||||||||||||    
T  30967520 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattc 30967421  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||| || |||||||| |||||||||||    
T  30967420 aaaatcattcaaatttcaaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 30967331  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    || || ||||||||||||||||||||| ||||||||||||||||||    
T  30967330 aaaataagatttcttgagattgttttttttttaaaagttactatct 30967285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 48261198 - 48261360
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaa 186  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  187 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttt 48261360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 6 - 249
Target Start/End: Original strand, 41725115 - 41725352
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||| |||| ||||||||||||||  |       |||||||| ||||||||||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||| ||||||||||||||   |||||||||||||| ||||| ||||||||| ||||||||||| || |||||||| ||||||||||||||||    
T  41725215 cattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagat 41725311  T
Q  206 gagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||   ||| ||||||||||||||||||||||||||    
T  41725312 gagatttcttg---ttggttttattttaaaagttactatctttt 41725352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 32684208 - 32683988
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||       ||||||||||||||    
T  32684208 aagtcttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattc 32684110  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||| || ||||||||||||||||||||    
T  32684109 aaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaaaaagtctttcatgaa 32684030  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  32684029 aagatgagatttattgagattgtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49501732 - 49501495
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||  |||||||||||||| |||||||||||||||| || |||||||||||||||| |||||||||||||| ||       ||||||||| ||||    
T  49501732 aagtcttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattc 49501633  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttc--atg 198  Q
    |||||||||||||||||||| ||||||||||||||||||||||||          ||| ||||||||||||||||| || |||||||||||||||  ||     
T  49501632 aaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tggaattttgtagtgtaattttaacaagaaaaagtctttcatata 49501543  T
Q  199 aaaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49501542 aaaagatgagatttcttgagattgtttttcttttaaaagttattatct 49501495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49507797 - 49507560
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||  |||||||||||||| |||||||||||||||| || |||||||||||||||| |||||||||||||| ||       ||||||||| ||||    
T  49507797 aagtcttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattc 49507698  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttc--atg 198  Q
    |||||||||||||||||||| ||||||||||||||||||||||||          ||| ||||||||||||||||| || |||||||||||||||  ||     
T  49507697 aaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tggaattttgtagtgtaattttaacaagaaaaagtctttcatata 49507608  T
Q  199 aaaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49507607 aaaagatgagatttcttgagattgtttttcttttaaaagttattatct 49507560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 55302828 - 55303051
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| || |||||||||| |||||| || |||| ||       |||| |||||||||    
T  55302828 aagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 55302927  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| || ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  55302928 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 55303027  T
Q  201 aagatgagatttcttgagattgtt 224  Q
    || |||||||||||| ||||||||    
T  55303028 aacatgagatttcttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25331116 - 25331342
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||| |||||    
T  25331116 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattc 25331215  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  25331216 aaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 25331315  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  25331316 aacatgagatttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49835034 - 49834809
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  49835034 aagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 49834935  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||| || ||||| ||||||||||| ||    
T  49834934 aaaatcattcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaagaagtctttcattaa 49834855  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  49834854 aagatgagatttcttgagattgtttttctattaaaagttactatct 49834809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 50018236 - 50018449
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| ||||||       ||||||||||||||    
T  50018236 aagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattc 50018335  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    || ||||||||||||| ||||||||||||||||||||| ||||| ||          ||||||||||||||||||| || |||||||||||||||| |||    
T  50018336 aagatcattcaaattttgaaggattgtttaataaattgaattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcaagaa 50018425  T
Q  201 aagatgagatttcttgagattgtt 224  Q
    |||||||||||| |||||||||||    
T  50018426 aagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 41881304 - 41881077
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        || | ||||||||    
T  41881304 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtatt 41881205  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||    
T  41881204 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 41881105  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||||||  ||||||||||    
T  41881104 aaacatgagatttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12112930 - 12113156
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| || ||| || |||| ||       ||||  ||||||||    
T  12112930 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattc 12113029  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||| ||||| ||||| ||||| |  | ||||||||||||||||||    
T  12113030 aaaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 12113129  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||| ||||||||||    
T  12113130 aacatgagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 36479452 - 36479228
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| |||||||||    
T  36479452 aagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattc 36479353  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||           ||||| ||||| |  || ||||||||||| |||||    
T  36479352 aaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaa 36479264  T
Q  201 aagatgagatttcttgagattgtttttattttaaaa 236  Q
    || |||||||||||||||||| ||||| ||||||||    
T  36479263 aacatgagatttcttgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 44771075 - 44770862
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggta-ttcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| |||||| |||| ||||||||| ||        |||  |||||||    
T  44771075 aagtcttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtatt 44770976  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||    
T  44770975 caaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatga 44770876  T
Q  200 aaagatgagatttc 213  Q
      | ||||||||||    
T  44770875 cgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 32951057 - 32950831
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||| || |||||||||| |||||| || |||| ||       |||| |||||||||    
T  32951057 aagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 32950958  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||||| ||||| ||||| |  | |||||| |||||||||||    
T  32950957 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaa 32950858  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| ||||| |||||    
T  32950857 aacatgagatttcttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 227
Target Start/End: Original strand, 1112889 - 1113104
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||||||||||||||||||||    
T  1112889 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 1112988  T
Q  112 aatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 211  Q
    |||||| || |||||||||||||||  |||||||||||||||| ||||||||  ||||  ||||| || | |||||||||||||||||||| ||||||||    
T  1112989 aatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatt 1113088  T
Q  212 tcttgagattgttttt 227  Q
    ||||  ||||||||||    
T  1113089 tcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7007359 - 7007585
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||||| || |||||||||| |||||| || |||| ||       |||| |||||||||    
T  7007359 aagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 7007458  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||||| ||||| ||||| |  | |||||  | |||||||||    
T  7007459 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaa 7007558  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  7007559 aacatgagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 39479578 - 39479350
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn--gtcttgtggtat 98  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||| || |||| ||         | ||||||||||    
T  39479578 aagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtat 39479479  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||    
T  39479478 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatg 39479379  T
Q  199 aaaagatgagatttcttgagattgttttt 227  Q
    |||  ||||||||||||  ||||||||||    
T  39479378 aaagcatgagatttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 19741129 - 19740929
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||| || |||||||| | ||||||||| |||| ||       |||||||||||||     
T  19741129 aagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtatta 19741030  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |    ||||||||||||||||||    
T  19741029 aaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaa 19740930  T
Q  201 a 201  Q
    |    
T  19740929 a 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 12913209 - 12913437
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||  ||||||||||||       ||||  ||||||||    
T  12913209 aagtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattc 12913308  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||          ||||||||| ||||| ||||| || |||||||||| |||||||||    
T  12913309 aaaatcattcaaattttgaaggattgtttaataaattggattttg----------tgggattttctagtgaaattttaacaagaaaaagtatttcatgaa 12913398  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagtt 239  Q
     | |||||||||||||  ||| ||||| |||||||||||    
T  12913399 gacatgagatttcttggaattatttttcttttaaaagtt 12913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22202000 - 22202214
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  22202000 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 22202099  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| ||||||| || |||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  22202100 aaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 22202199  T
Q  201 aagatgagatttctt 215  Q
    || || |||||||||    
T  22202200 aacattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 29649888 - 29649735
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||  || || | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  29649888 aagtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 29649789  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29649788 aaaatcattcaaatttcgaaagattgtttaataaattggattttgatggatttt 29649735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 34228798 - 34228578
Alignment:
Q  7 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 106  Q
    |||| |||||||||||||||||||||||||| ||||||||| || |||||||||| || | | || |||| ||       |||| |||||||||||||||    
T  34228798 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatc 34228699  T
Q  107 attcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatg 206  Q
    ||| |||||||||| |||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||| |  | |||||||||||||||||||| |||    
T  34228698 attgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 34228599  T
Q  207 agatttcttgagattgttttt 227  Q
    ||||||||| |||||||||||    
T  34228598 agatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1044794 - 1045006
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| |||||||||  ||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  1044794 aagtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 1044891  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||| ||||||| |||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  1044892 aaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 1044991  T
Q  201 aagatgagatttctt 215  Q
    || || |||||||||    
T  1044992 aacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 5799962 - 5800198
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||| ||||||||||||||||||| |||||||||||||||||||   |||| |||||  || || ||||||||||| ||        |||||||||||||    
T  5799962 aagttttgtggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtatt 5800061  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||          || |||||||||| ||||||| || |||||||||||||| ||||    
T  5800062 caaaatcattcaaatttcaaaggattgtttaataaattggattttg----------tgagattttgtagagtaattttaacaagaaaaagtctttaatga 5800151  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||| |||||| |||||||||||||| |||||||||||| |||||    
T  5800152 aaagataagattttttgagattgtttttcttttaaaagttattatct 5800198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9163061 - 9163236
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||| |||||||||  |       |||||||| |||||    
T  9163061 aagtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattc 9163160  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||| ||||| |||||    
T  9163161 aaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattt 9163236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 37046673 - 37046445
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||| || |||| ||        |||| ||| ||||    
T  37046673 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatt 37046574  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtg-taatttcaagaagaaaaagtctttcatg 198  Q
     ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| |||||  ||||| |  | ||||||||||||||||    
T  37046573 taaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatg 37046474  T
Q  199 aaaagatgagatttcttgagattgttttt 227  Q
    |||| ||||||||||||  ||||||||||    
T  37046473 aaaatatgagatttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 28483923 - 28484117
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    |||||||||||||||||||||| |||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  140 attttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 239  Q
    ||||||          | ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||| ||    
T  28484023 attttg----------taggattttgtagtgtaattt-aacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa-tt 28484110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30009898 - 30009672
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||| |||||| ||||||| |||||| ||||||||| || |||||||||| |||||| || |||| ||       |||| |||||||||    
T  30009898 aagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 30009799  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| ||||||  || |||||||||||||||  |||||||||||||||| ||||||||| ||||  ||||| |  | ||||||||||||||||||    
T  30009798 aaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaa 30009699  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  30009698 aacatgagatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 3436583 - 3436792
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||| ||||||||||||||| |||||| ||| |||||| ||||| | |||||||| |||||| || |||||||        |||  |||||||||||||    
T  3436583 ttgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaat 3436682  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||| || | |||||||| ||||||||||| ||    
T  3436683 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacat 3436782  T
Q  206 gagatttctt 215  Q
     |||||||||    
T  3436783 aagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 28541683 - 28541858
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||| |||||| || |||| ||       |||| |||||||||    
T  28541683 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 28541782  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||| ||||| ||||| |||||    
T  28541783 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattt 28541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 39307474 - 39307260
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| | ||||||||||       ||||||||||||||    
T  39307474 aagttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattc 39307375  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    | ||||||||||||||| || |||| |||||| |||||  |||||||| ||||| ||||||||| ||||| ||||| || | |||||||| | | || ||    
T  39307374 ataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaa 39307275  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  39307274 aacatgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 28370909 - 28371093
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| || |||||| |||| ||       ||||  ||||||||    
T  28370909 aagtcttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattc 28371008  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaa 185  Q
    ||||||||||||||||  |||||||||||||||||||| |||||| || ||||| ||||||||| ||||| ||||| ||||||||    
T  28371009 aaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 40 - 227
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    ||||||||||| |||||||||| |||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  140 attttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||||||| ||| ||||| ||||| ||||| |  |  ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 25446036 - 25446227
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||  ||||||||||||||| |||||||||| |||||| ||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  25446036 aagtcttgtattattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 25446134  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctt 193  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||    
T  25446135 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 227
Target Start/End: Complemental strand, 46635852 - 46635643
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       || | || |||||||||||||||||    
T  46635852 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattca 46635753  T
Q  112 aatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 211  Q
    |||||||||||||||||||||||||  ||||      |||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||||    
T  46635752 aatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatt 46635659  T
Q  212 tcttgagattgttttt 227  Q
    ||||  ||||||||||    
T  46635658 tcttaggattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaa 186  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||| || ||||| ||||| |  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  187 aagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||| |||| |||||||||||| |||||| ||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24131193 - 24130976
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  24131193 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 24131094  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaag-aaaaagtctttcatga 199  Q
    |||          ||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| | || | ||||| ||||||||||    
T  24131093 aaa----------tttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatga 24131004  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||||||  ||||||||||    
T  24131003 aaacatgagatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 31314949 - 31314737
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||    |||| || |||| ||       |||| |||||||||    
T  31314949 aagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattc 31314854  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||          ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  31314853 aaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 31314764  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  31314763 aacatgagatttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25504860 - 25504697
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||||  |||||| |||||| ||||| | |||||||| |||||| || |||| ||       |||  ||| |||||    
T  25504860 aagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattc 25504761  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  25504760 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 8711978 - 8712086
Alignment:
Q  128 ttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T
Q  228 attttaaaa 236  Q
     ||||||||    
T  8712078 cttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 23464940 - 23465108
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||  |||||||||||||||| ||||||||| |||||||| |||   |||||||| |||||| || |||| ||       |||| |||||||||    
T  23464940 aagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattc 23465039  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagt 169  Q
    |||| |||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||| ||||    
T  23465040 aaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagt 23465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 53275827 - 53276025
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||| |||||||| |||||| |||||||||| ||||||||||||  ||||||||| |||| |||| |||| ||       |||| ||| |||| |||    
T  53275827 tcttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaa 53275926  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 202  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| || |||||| || |  ||||| |  | ||||||||||||||| ||||    
T  53275927 atcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 7249900 - 7249811
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 7249811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  128 ttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||||||||||||||||||| || |||||| ||||| ||||| || ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 40537366 - 40537218
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||| || ||| || |||| ||           ||||||||||    
T  40537366 aagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattc 40537272  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    ||||||||| |||||||||| |||||||||||||||  ||||||||||||||||    
T  40537271 aaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggatttt 40537218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20021329 - 20021404
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatca 76  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  20021329 aagttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatca 20021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  93 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtct 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||          ||||||||| ||||| || || |  ||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  193 ttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||| || | ||||||||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 227
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  92 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtc 191  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||| ||||| ||| ||||| ||||| |||||    | |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  192 tttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 215
Target Start/End: Complemental strand, 41581982 - 41581796
Alignment:
Q  28 tttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 127  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||| | | ||       |||| |||||||| | | |||||||||||| |||  |||||    
T  41581982 tttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttgaataattgt 41581883  T
Q  128 ttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaag-aaaaagtctttcatgaaaagatgagatttctt 215  Q
    |||||||||||||  |||||  ||||| ||||||||| ||||| ||||| || | | ||||| | ||||||| ||| ||||||||||||    
T  41581882 ttaataaattgga--ttgatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 11090336 - 11090408
Alignment:
Q  3 gtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatc 75  Q
    |||||||||||||||||||||| |||||| || || |||||||| ||| |||||||||| |||||||||||||    
T  11090336 gtcttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27767999 - 27768066
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||||| ||||  |||| |||||||||||| |||||||||| ||||||    
T  27767999 aagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 27768066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37915770 - 37915837
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||||| || |||||||||||| |||||||||| ||||||    
T  37915770 aagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagact 37915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37915728 - 37915798
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||||||||||||||||||||||| | ||||| | || |||||||||||| |||||||||| |||||||||    
T  37915728 aagtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 20021436 - 20021563
Alignment:
Q  119 aaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaa-gaagaaaaagtctttcatgaaaagatgagatttcttga 217  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| || || ||||| ||  || ||||| ||||||||||| | || ||||||| ||     
T  20021436 aaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacataagatttcatgg 20021535  T
Q  218 gattgtttttattttaaaagttactatct 246  Q
    ||||  ||||  ||| |||||||||||||    
T  20021536 gattactttt-ctttgaaagttactatct 20021563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5441347 - 5441414
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  5441347 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 5441414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30967562 - 30967495
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  30967562 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 30967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41881346 - 41881281
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| | |||||||| ||||    
T  41881346 aagtcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaga 41881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12913166 - 12913234
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattt-taaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| ||||| | ||||  |||||||||||| |||||| ||||||||||    
T  12913166 aagtcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaattaagact 12913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40537408 - 40537307
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||| |||| ||||| | |||| |||||||||||| | |||||||| |||||| ||  ||||||       ||||||||||||||    
T  40537408 aagtcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattc 40537309  T
Q  101 aa 102  Q
    ||    
T  40537308 aa 40537307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7249993 - 7249926
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| |||||||||||||||||| ||||||| |||||  ||||| ||||||| || ||||||    
T  7249993 aagtcttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagact 7249926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  148 ggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 235  Q
    ||||||| | ||||||| ||||| ||||| || |||||||| |||||||||| |  ||||||||| |||||||||||||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatgagac-atgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37828581 - 37828522
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||| ||||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  37828581 aagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaa 37828522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42786711 - 42786770
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||| | |||||||||    
T  42786711 aagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 42786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 54341087 - 54341154
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||  |||||||||| ||||||    
T  54341087 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaagact 54341154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54853731 - 54853664
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  54853731 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 54853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25504902 - 25504824
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcattt 79  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| |||| | || |||||||    
T  25504902 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttgatcattt 25504824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1044753 - 1044817
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||  || ||||||||||||||| | |||||||| ||||    
T  1044753 aagtcttgtggtattcaatcaagactcttt-ccaatttaaaaaagtcttgtgttattcaatcaaga 1044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20021287 - 20021352
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||| |||||||| ||||||  |||| |||||||| ||| |||||||||| ||||    
T  20021287 aagtcttgtggtatttaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 20021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24131235 - 24131170
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  24131235 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 24131170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25331074 - 25331139
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  25331074 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 25331139  T

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Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28541641 - 28541706
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  28541641 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 28541706  T

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Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32951099 - 32951034
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  32951099 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 32951034  T

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Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37046715 - 37046650
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  37046715 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 37046650  T

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Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39479620 - 39479555
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  39479620 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 39479555  T

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Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1112920 - 1112979
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||||    
T  1112920 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1112979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37828665 - 37828598
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||| ||||| |||||||||| ||||||    
T  37828665 aagtcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagact 37828598  T

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Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 49835076 - 49835009
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||| | | ||||  | || |||||||||||| |||||||||| ||||||    
T  49835076 aagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 49835009  T

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Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50018194 - 50018261
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | |||   |||| |||||||||||  |||||||||| ||||||    
T  50018194 aagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagact 50018261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 19741168 - 19741106
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  19741168 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19741106  T

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Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 29855676 - 29855726
Alignment:
Q  11 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    ||||| |||||||| | ||||||||||||||||| | ||||||||||||||    
T  29855676 gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaat 29855726  T

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Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 41320735 - 41320769
Alignment:
Q  3 gtcttgtggtattcaatcaagattctttgtcattt 37  Q
    |||||||| ||||||||||||||||||||||||||    
T  41320735 gtcttgtgttattcaatcaagattctttgtcattt 41320769  T

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Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 11090435 - 11090520
Alignment:
Q  147 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 232  Q
    |||||||| ||||||||| ||||| ||||| |  |  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

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Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22201958 - 22202023
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||| ||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  22201958 aagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 22202023  T

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Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36728075 - 36728026
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttg 50  Q
    ||||||||| |||||||||||||||| ||| | ||||||||||| |||||    
T  36728075 aagtcttgtagtattcaatcaagattttttataattttaaaaaaatcttg 36728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 40537199 - 40537150
Alignment:
Q  183 gaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 232  Q
    |||||||||||||||||||| ||||||||||||  |||| ||||| ||||    
T  40537199 gaaaaagtctttcatgaaaacatgagatttcttaggattttttttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49469264 - 49469329
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||| |||||||| |||||   |||| | |||||||||| | |||||||||||||    
T  49469264 aagtcttgtggtatttaatcaagactctttccaatttaagaaaagtcttgtgttattcaattaaga 49469329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 467826 - 467882
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 57  Q
    |||| |||| ||||||||| |||||| ||||  |||| |||||||||||||||||||    
T  467826 aagttttgtcgtattcaattaagattatttgcaatttaaaaaaagtcttgaggtatt 467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29649930 - 29649874
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 57  Q
    |||| ||||||||||||||||||| | ||||  |||| |||||||||||| ||||||    
T  29649930 aagttttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtatt 29649874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 41320786 - 41320830
Alignment:
Q  24 attctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||| |||||| |||||||||||| |||||||||| ||||||    
T  41320786 attctttatcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 14782355 - 14782107
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  14782355 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 14782256  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  14782255 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14782156  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782155 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 14782107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 44726030 - 44725782
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  44726030 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 44725931  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  44725930 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 44725831  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725830 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 44725782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 39467688 - 39467443
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  39467688 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 39467589  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  39467588 aaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 39467489  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  39467488 aagatgagattttttgagattgtttttcttttaaaagttactatct 39467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 19718101 - 19717856
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  19718101 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 19718002  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||| |||||    
T  19718001 aaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaa 19717902  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19717901 aagatgagatttcttgagattgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 18958947 - 18958706
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  18958947 aagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 18958848  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  18958847 aaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18958748  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    ||||| |||||| |||||||||||||| ||||||||||||||    
T  18958747 aagattagattttttgagattgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9288677 - 9288436
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||| ||       ||||||||||||||    
T  9288677 aagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattc 9288578  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  9288577 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 9288478  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  9288477 aagatgagatttcttgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 26856057 - 26856298
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtctt-gaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||       ||||||||||||||||||    
T  26856057 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 26856156  T
Q  105 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaaga 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||  |||| |    
T  26856157 tcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaa 26856256  T
Q  205 tgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    | ||||||||||||||||||||| ||||||||||||||||||    
T  26856257 taagatttcttgagattgtttttcttttaaaagttactatct 26856298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18306181 - 18305946
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  18306181 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 18306082  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||| || ||||||||||||||||||||    
T  18306081 aaaatcattcaaatttcgaaagattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18305992  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  18305991 aagatgagatttcttgagattgttattcttttaaaagttactatct 18305946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10295601 - 10295360
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| ||| |||||||||||| |||| |||| || ||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  10295601 aagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 10295502  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgga-ttttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||    
T  10295501 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 10295402  T
Q  200 aaagatgagatttcttgagattg-tttttattttaaaagtta 240  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  10295401 aaagatgagatttcttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 43166910 - 43166665
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| |||||| ||  ||||||       ||||||||||||||    
T  43166910 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattc 43166811  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||||| |||||||||    
T  43166810 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaa 43166711  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  43166710 aagatgagatttcttgagattggttttcttttaaaagttactatct 43166665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4403093 - 4403334
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| || || ||||||||||||| |||||| |||||||||||||| ||||||||| ||        ||| |||||||||    
T  4403093 aagtcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattc 4403192  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||    
T  4403193 aaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaa 4403292  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    || ||||||||||||| |||||||||| ||||||||||||||    
T  4403293 aatatgagatttcttgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7466321 - 7466556
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||  ||       ||||||||||||||    
T  7466321 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattc 7466420  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||| |||||||||||||||||||||||          ||||||||||||||||||||| || ||||||||||||||||||||    
T  7466421 aaaatcattcaaattttgaagaattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 7466510  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7466511 aagatgagatttcttgagattgtttttcttttaaaagttacgatct 7466556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 4 - 244
Target Start/End: Original strand, 32497514 - 32497744
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||||||||    
T  32497514 tcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 32497613  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||| || |||| ||||||||||||||||||    
T  32497614 atcattcaaatttcgaatgattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaag 32497703  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactat 244  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  32497704 atgagatttcttgagattgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 42306005 - 42305774
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||    
T  42306005 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 42305906  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||          ||||||||||||||||||| || ||||||||||| ||||||||    
T  42305905 aaaataattcaaatttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtcattcatgaa 42305816  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    || |||||||||||||||||||||||| |||| |||||||||    
T  42305815 aaaatgagatttcttgagattgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 16362185 - 16362411
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||       |||| ||||||||||||    
T  16362185 tcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaa 16362284  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| || |||||||| ||||| || |||||    
T  16362285 atcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaaatcttttataaaaag 16362374  T
Q  204 atgagatttcttgagattgtttttattttaaaagtta 240  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16362375 atgagatttcttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24502033 - 24501807
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  24502033 aagtcttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 24501934  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  24501933 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 24501834  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  24501833 aacatgagatttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 26374645 - 26374424
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||||||||||||||    
T  26374645 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 26374546  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||    
T  26374545 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 26374446  T
Q  206 gagatttcttgagattgttttt 227  Q
    ||||||||||  ||||||||||    
T  26374445 gagatttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 42938337 - 42938111
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  42938337 aagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 42938238  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |    ||||||||||||||||||    
T  42938237 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaa 42938138  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  42938137 aacatgagatttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 2705039 - 2704813
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  2705039 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 2704940  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||   ||||||||||||||| ||||||||| |||||  |||| |  | ||||||||||||||||||    
T  2704939 aaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaa 2704840  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  2704839 aacatgagatttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 31623689 - 31623900
Alignment:
Q  9 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||||||||||    
T  31623689 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 31623788  T
Q  109 tcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgag 208  Q
    ||||||||||||||||||||||||||||||||                    |||||||||||||||| || |||||||||| |||||||||||||| ||    
T  31623789 tcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataag 31623868  T
Q  209 atttcttgagattgtttttattttaaaagtta 240  Q
    ||||||||||||||||||| ||||||||||||    
T  31623869 atttcttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 42735497 - 42735271
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||| || |||| ||       |||| |||||||||    
T  42735497 aagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattc 42735398  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |    ||||||||||||||| ||    
T  42735397 aaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaa 42735298  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  42735297 aacatgagatttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4031478 - 4031334
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||       ||||||||||||||    
T  4031478 aagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattc 4031379  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4031378 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 37857144 - 37857336
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    ||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  140 attttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 239  Q
    ||||||||          ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37857244 attttgat----------ggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtt 37857333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 42937339 - 42937563
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||   |||| || |||| ||       |||| |||||||||    
T  42937339 aagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattc 42937436  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  |  |||||||||||||||||    
T  42937437 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaa 42937536  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  42937537 aacatgagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 10392446 - 10392246
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||| |||| ||       |||| |||||||||| |||||||||    
T  10392446 tattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattca 10392347  T
Q  112 aatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 211  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatt 10392247  T
Q  212 t 212  Q
    |    
T  10392246 t 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5576841 - 5576614
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        |||  ||||||||    
T  5576841 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtatt 5576742  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||| |||||||||||||   |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||| ||||    
T  5576741 caaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatga 5576642  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||||||  ||||||||||    
T  5576641 aaacatgagatttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23115388 - 23115163
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  23115388 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 23115289  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
     ||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| || || |||||    | ||||||||||||||||||    
T  23115288 -aaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaa 23115190  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||| |||  ||||||||||    
T  23115189 aacatgagattccttaggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 7507114 - 7506893
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||| ||||||||| |||||| ||||||||| | |||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||||||     
T  7507114 ttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaac 7507015  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||| ||| ||    
T  7507014 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacat 7506915  T
Q  206 gagatttcttgagattgttttt 227  Q
    ||||||||||  ||||||||||    
T  7506914 gagatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 39190028 - 39189798
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||| |||||||||| || ||| || |||||||       ||||  || ||||||| ||    
T  39190028 ttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacat 39189930  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||   | ||||| ||||  ||||| || |||||||| ||||||||||||| ||    
T  39189929 cattcaaatttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacat 39189832  T
Q  206 gagatttcttgagattgtttttattttaaaagtt 239  Q
    ||||||||||| |||||||||| |||||||||||    
T  39189831 gagatttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 32711502 - 32711358
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  32711502 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 32711403  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||    
T  32711402 aaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 43959644 - 43959796
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||| | || |||| ||       | || |||||||||    
T  43959644 aagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattc 43959742  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  43959743 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatttt 43959796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 41479083 - 41479299
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       ||||  ||||||||    
T  41479083 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattc 41479182  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||  |||||||          ||||||||| ||||  ||||| |  | |||||| |||||||||||    
T  41479183 aaaatcattcaaatttcgaatgattgtttaataaatcagattttg----------tgggattttctagtaaaattttagcatgaaaaaatctttcatgaa 41479272  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  41479273 aacatgagatttcttaggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 4950150 - 4950010
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaa 186  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||| ||| ||| ||||| ||||| ||||| |  | ||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  187 aagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    || | ||||||| ||| || ||||||||| | |||||||||    
T  4950050 aaatatttcatgcaaacataagatttcttaaaattgttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  93 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 13478384 - 13478307
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| | |||||||| | |||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggatttt 13478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  158 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14782397 - 14782330
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  14782397 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 14782330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44726072 - 44726005
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  44726072 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 44726005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18958989 - 18958911
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcattt 79  Q
    ||||||||| |||||||||||||| | ||||  |||| |||||||||||| |||||||||| |||||| || |||||||    
T  18958989 aagtcttgtagtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttatcattt 18958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8543509 - 8543574
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||| ||||| |||| |||||||||||||||| |||| |||||||||||  |||||||||||||||    
T  8543509 aagtgttgtgttatttaatcaagattctttgttatttaaaaaaagtcttatggtattcaattaaga 8543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7466279 - 7466346
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  7466279 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 7466346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18306223 - 18306156
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  18306223 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42306047 - 42305980
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| ||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  42306047 aagtcttgtgatattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 42305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32497427 - 32497497
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||||||||||||||||||||||| | |||   | || |||||||||||| |||||||||| |||||||||    
T  32497427 aagtcttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42735539 - 42735461
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcattt 79  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| |||| | || |||||||    
T  42735539 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttatcattt 42735461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4031520 - 4031455
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||| ||||||| | ||||  |||| |||||||||||| |||||||||| ||||    
T  4031520 aagtcttgtggtattcgatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23115430 - 23115365
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  23115430 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 23115365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42938379 - 42938314
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  42938379 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 42938314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43959602 - 43959667
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  43959602 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 43959667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 5576882 - 5576818
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  5576882 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 5576818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  96 tattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 144  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

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Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

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Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  88 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 144  Q
    |||||||||||| |||||||||| |||||| || |||||||| |||||||| |||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7507077 - 7507018
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||||    
T  7507077 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19718143 - 19718076
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||| || ||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  19718143 aagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 19718076  T

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Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26374608 - 26374549
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||||    
T  26374608 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 26374549  T

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Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 13478475 - 13478415
Alignment:
Q  17 aatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcattt 79  Q
    ||||||||| ||||||||||| |||||||||||| | | |||||||||||||||| |||||||    
T  13478475 aatcaagat-ctttgtcattt-aaaaaagtcttgtgttgttcaattaagactttttatcattt 13478415  T

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Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2705081 - 2705016
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   | || |||||||||||| | |||||||| ||||    
T  2705081 aagtcttgtggtattcaatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaaga 2705016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 29930902 - 29930857
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattt-taaaaaagtcttg 50  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  29930902 ttgtggtattcaatcaagattatttgtcatttataaaaaaatcttg 29930857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32711544 - 32711479
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||| ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  32711544 aagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 32711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41479041 - 41479106
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||| ||||    
T  41479041 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 41479106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 9771026 - 9770962
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatca 76  Q
    ||||||||||||| ||||| |||||| |||||||||  |  ||||||||| ||||||||| ||||    
T  9771026 tattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatca 9770962  T

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Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32497469 - 32497529
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||||||||||||||||||| | ||||  | || |||||| ||||| ||||||||||    
T  32497469 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaat 32497529  T

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Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 100)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 36674351 - 36674103
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  36674351 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 36674252  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  36674251 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 36674152  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674151 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 36674103  T

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Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 34484251 - 34484006
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       || |||||||||||    
T  34484251 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattc 34484152  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||    
T  34484151 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaa 34484052  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  34484051 aagatgagatttcttgagattgtttttgttttaaaagttactatct 34484006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17946273 - 17946518
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||| ||| |||||    
T  17946273 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattc 17946372  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  17946373 aaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 17946472  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17946473 aagatgagatttcttgagattgtttttcttttaaaagttactatct 17946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44906734 - 44906489
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  44906734 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 44906635  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||| ||||||||||||    
T  44906634 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaa 44906535  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  44906534 aagatgagatttcttgagattgtttttcttttaaaagttactatct 44906489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11431511 - 11431750
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  11431511 aagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 11431610  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  11431611 aaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 11431710  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagtta 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11431711 aagatgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 6 - 249
Target Start/End: Original strand, 32580167 - 32580409
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||    
T  32580167 ttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 32580265  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||    
T  32580266 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 32580365  T
Q  206 gagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  32580366 gagatttcttgagattgtttttattttaaaaattactatctttt 32580409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 26107260 - 26107487
Alignment:
Q  15 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||||||||||||||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaat 26107359  T
Q  115 ttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttct 214  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||||||| |||||| ||||||||||||||||    
T  26107360 ttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttct 26107459  T
Q  215 tgagattgtttttattttaaaagttact 242  Q
    ||||||||||||| ||||||||||||||    
T  26107460 tgagattgtttttcttttaaaagttact 26107487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 40897129 - 40897375
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||| ||||||||    
T  40897129 aagtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattc 40897228  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||    
T  40897229 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaa 40897328  T
Q  201 aagatgagatttcttgagattgtttttatttt-aaaagttactatct 246  Q
    ||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  40897329 aagatgagatttcttgatattgtttttcttttgtaaagttactatct 40897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18749597 - 18749842
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||| ||||||||||||| | | ||  ||| |||||||||||||||||||||||||| || ||||||||||| ||       ||||||||||||||    
T  18749597 aagtcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattc 18749696  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  18749697 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18749796  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  18749797 aagatgagatttcttgagattgtttttcttttaaaagttactatct 18749842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 54628828 - 54629074
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnng-tcttgtggtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||            ||||||||||||    
T  54628828 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtatt 54628927  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |    
T  54628928 caaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 54629027  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  54629028 aaagatgagatttcttgagattgtttttcttttgaaagttactatct 54629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 52810363 - 52810608
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||       ||||||||||||||    
T  52810363 aagtgttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 52810462  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| || |||||||| |||||||||||    
T  52810463 aaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaa 52810562  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||    
T  52810563 aagatgagatttcttgagattgtttttcttttaaaagaaactatct 52810608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 48379155 - 48379387
Alignment:
Q  14 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 113  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||       |||||||||||||||||||||||||||    
T  48379155 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 48379254  T
Q  114 tttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttc 213  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||||    
T  48379255 tttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttc 48379354  T
Q  214 ttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||| ||||||| ||||||||||    
T  48379355 ttgagattgtttttcttttaaatgttactatct 48379387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 52618186 - 52617947
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  52618186 aagtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 52618087  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       || ||||||||||| ||    
T  52618086 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattt------taacaagtctttcataaa 52617993  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  52617992 aagatgagatttcttgagattgtttttcttttaaaagttactatct 52617947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 31646505 - 31646265
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||        |||||||||||||    
T  31646505 aagtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 31646406  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  31646405 aaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 31646306  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttacta 243  Q
    |  ||||||||||||||||||||| || |||||||||||||||    
T  31646305 a--atgagatttcttgagattgttattcttttaaaagttacta 31646265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 10728862 - 10728629
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||||     
T  10728862 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtattt 10728763  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||| || ||||||||||||||||||||    
T  10728762 aaaatcattcaaatttggaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 10728673  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactat 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  10728672 aagatgagatttcttgagattgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 51737948 - 51737703
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||       |||||||||||||    
T  51737948 aagtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtatt 51737849  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||| |    
T  51737848 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataa 51737749  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||| ||  |||||||||||||||||  ||||||||||| |||||    
T  51737748 aaagataagtattcttgagattgttttt-ctttaaaagttattatct 51737703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 50903464 - 50903233
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn---gtcttgtggta 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||          |||||||||||    
T  50903464 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggta 50903365  T
Q  98 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcat 197  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||| ||    
T  50903364 ttcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttat 50903265  T
Q  198 gaaaagatgagatttcttgagattgtttttat 229  Q
    ||||| ||||||||||||||||||||||||||    
T  50903264 gaaaatatgagatttcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 37454851 - 37455075
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||       |||||||||||||||||||    
T  37454851 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 37454950  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||||||| ||||||||||||||||| ||||||          ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  37454951 cattcaaatttcgaatgattgtttaataaattgaattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 37455040  T
Q  206 gagatttcttgagattgtttttattttaaaagtta 240  Q
    |||||||||||||||||||||| ||||||||||||    
T  37455041 gagatttcttgagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 39038030 - 39038260
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||| || ||||||||||||||||| |||||||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagat 39038219  T
Q  206 gagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  39038220 gagatttcttgaaattgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 50762271 - 50762038
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||| ||||       ||||||||||||||    
T  50762271 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattc 50762172  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||||          ||||||||||||||||||| || ||||||||||||||||||||    
T  50762171 aaaatcattctaatttcgaatgattgtttgataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 50762082  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactat 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  50762081 aagatgagatttcttgagattgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23753607 - 23753383
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  23753607 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 23753508  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||| || |||||||||||||||||| |    
T  23753507 aaaatcattcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtctttcatg-a 23753429  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  23753428 aagatgagatttcttgagattgtttttgttttaaaagttactatct 23753383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19253812 - 19254038
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  19253812 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 19253911  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  19253912 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 19254011  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  19254012 aacatgagatttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 20832977 - 20833187
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       ||||||||||||||    
T  20832977 aagtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattc 20833076  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || |||||  ||||||||||| || |||||||||| |||||||||    
T  20833077 aaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaa 20833176  T
Q  201 aagatgagatt 211  Q
    ||||| |||||    
T  20833177 aagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 6035266 - 6035039
Alignment:
Q  9 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       |||| ||| |||||||||||||    
T  6035266 tggtattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcat 6035167  T
Q  109 tcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgag 208  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||| ||||  ||||| |  | ||||||||||||||| |||| |||||    
T  6035166 tcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgag 6035067  T
Q  209 atttcttgagattgtttttattttaaaa 236  Q
    ||||||| ||||||||||| ||||||||    
T  6035066 atttcttaagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 10660520 - 10660744
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       || |||||||||||    
T  10660520 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattc 10660619  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| || |              |||||    
T  10660620 aaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaaca--------------atgaa 10660695  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10660696 aagatgagatttcttgagattgtttttattttaaaagttactatttttt 10660744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 20498194 - 20498420
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  20498194 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 20498293  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  20498294 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 20498393  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  20498394 aacatgagatttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 996307 - 996081
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| |||| | || |||| ||       |||| |||||||||    
T  996307 aagtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattc 996208  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  996207 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 996108  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  996107 aacatgagatttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 3999866 - 3999640
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        ||| |||||||||    
T  3999866 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattc 3999767  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| ||    
T  3999766 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaa 3999667  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  3999666 aacatgagatttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 10139367 - 10139141
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| || |||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  10139367 aagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 10139268  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  10139267 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 10139168  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  10139167 aacatgagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 6589549 - 6589775
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| |||| ||||||||| |||||||||||| |||||||||| |||||| || |||||||       |||| |||||||||    
T  6589549 aagtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattc 6589648  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||| ||| ||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  6589649 aaaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 6589748  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  6589749 aacatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 37820698 - 37820472
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||||||||| |||| | || |||| ||       |||| |||||||||    
T  37820698 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattc 37820599  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||  |||| ||||| |  | ||||||||||||||| ||    
T  37820598 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaa 37820499  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  37820498 aacatgagatttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33808020 - 33807796
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        |||| ||||||||    
T  33808020 aagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtatt 33807921  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||    
T  33807920 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 33807821  T
Q  200 aaagatgagatttcttgagattgtt 224  Q
    ||| ||||||||||||  |||||||    
T  33807820 aaacatgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 227
Target Start/End: Original strand, 40246832 - 40247055
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||| || |||| ||       |||| ||||||||||||    
T  40246832 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaa 40246931  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | ||||||||||||||||||||     
T  40246932 atcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaac 40247031  T
Q  204 atgagatttcttgagattgttttt 227  Q
    |||||||| |||  ||||||||||    
T  40247032 atgagattccttatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 3206417 - 3206200
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||||||||||||||         ||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  3206417 aagtcttgtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 3206327  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||||||    
T  3206326 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaa 3206227  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  3206226 aacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44762258 - 44762032
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| ||  ||||||||| |||||| || |||| ||       |||| ||||||||     
T  44762258 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattt 44762159  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| |||||| |||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||| |||||    
T  44762158 aaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaa 44762059  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  44762058 aacatgagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 35337720 - 35337930
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  35337720 aagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 35337819  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||  ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| |||||||||    
T  35337820 aaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaa 35337918  T
Q  201 aagatgagattt 212  Q
    || |||||||||    
T  35337919 aacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25418351 - 25418577
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| |||| ||        ||| | |||||||    
T  25418351 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattc 25418450  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||  ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | |||||||| |||||||||    
T  25418451 aaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaa 25418550  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||| |||  ||||||||||    
T  25418551 aacatgagattccttaggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 29449079 - 29448853
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| |||||||||  ||||||||||| | |||||||| |||||| |  |||| ||       |||| |||||||||    
T  29449079 aagtcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattc 29448980  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||  ||||| |  |  |||||||||||||||||    
T  29448979 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaa 29448880  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  29448879 aacatgagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 54625577 - 54625803
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| |||| ||||||||| |||||| |||||  ||||||||| |||||| || |||| ||       |||| |||||||||    
T  54625577 aagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 54625676  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| |||||||||    
T  54625677 aaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaa 54625776  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||| ||||    
T  54625777 aacatgagatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 33996752 - 33996548
Alignment:
Q  11 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 110  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        ||  |||||||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  111 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 210  Q
    ||||||||||||||||||||||||||  ||||||||||||||||  |||||||| ||||| ||||| |  | |||||||||||| || |||| |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagat 33996553  T
Q  211 ttctt 215  Q
    |||||    
T  33996552 ttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 44276374 - 44276598
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       ||||  ||||||||    
T  44276374 aagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattc 44276473  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||    ||||||||||||||||||||||||||          ||||||||| ||||| ||||| || |||||||| |||||||||||    
T  44276474 aaaatcattcaaatt----aggattgtttaataaattggattttg----------tgggattttctagtgaaattttaacaagaaaaaatctttcatgaa 44276559  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagtt 239  Q
     | ||||||||| ||| |||| ||||| |||||||||||    
T  44276560 gacatgagattttttgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 53929336 - 53929123
Alignment:
Q  14 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 113  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  114 tttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttc 213  Q
    | ||||| |||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||| |  | |||||| ||||| ||||||| |||||||||     
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttt 53929137  T
Q  214 ttgagattgttttt 227  Q
    ||  ||||||||||    
T  53929136 ttaggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1440174 - 1440010
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||| || ||| |||||||||| |||||| || |||| ||       |||| ||||||||    
T  1440174 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 1440075  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  1440074 caaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6975734 - 6975884
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  6975734 aagtcttgtggtattcaatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattc 6975830  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    ||||||||||||||||||||| ||| |||| ||||||||| ||||  |||||||    
T  6975831 aaaatcattcaaatttcgaagaattatttactaaattggaatttgtgggatttt 6975884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29029991 - 29030153
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       ||||||||||||||    
T  29029991 aagtcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattc 29030089  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||| |||||    
T  29030090 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaatttt 29030153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 51699700 - 51699495
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||  |||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||| || |||| ||        ||| |||||||||    
T  51699700 aagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattc 51699602  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||| ||||| ||||||||| ||||| ||||| |  | |||||| |||||| ||||    
T  51699601 aaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaa 51699502  T
Q  201 aagatga 207  Q
    || ||||    
T  51699501 aacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 246
Target Start/End: Complemental strand, 39842619 - 39842470
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaa 186  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||          ||| |||||||| || ||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggatttt----------gtaatgtaattttaacaagaaa 39842530  T
Q  187 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaagttaccatct 39842470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 52114516 - 52114728
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtattcaa 102  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||| |||| ||        |||| |||||||||||    
T  52114516 tcttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaa 52114615  T
Q  103 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 202  Q
    ||| |||||||||||| |||||||||||||||||  ||||||||| |||||| ||| ||||| ||||  ||||| |  | |||||| |||||  ||||||    
T  52114616 aataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaa 52114715  T
Q  203 gatgagatttctt 215  Q
     ||||||||||||    
T  52114716 catgagatttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  93 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtct 192  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||  |  | ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  193 ttcatgaaaagatgagatttcttgagattgttttt 227  Q
    |||||||||| ||||||||||||  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    |||||||||||||||||||||| |||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  140 attttgatgga 150  Q
    |||||||||||    
T  539486 attttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22057746 - 22057922
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagt-cttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| ||||||   |||| ||||||| || |||||| || |||| ||        ||| ||||||||    
T  22057746 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatt 22057845  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
     ||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  22057846 taaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 22057922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 55235171 - 55235322
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||| || ||||||||||||| |||||||||||||||||  |||||||||||| || ||| ||||||| ||       ||||  || |||||    
T  55235171 aagtcttgtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattc 55235268  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  55235269 aaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12103614 - 12103729
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       ||||  ||||||||    
T  12103614 aagtctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattc 12103713  T
Q  101 aaaatcattcaaattt 116  Q
    ||||||||||||||||    
T  12103714 aaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  158 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 235  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18749555 - 18749630
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatca 76  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18749555 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 15493061 - 15492850
Alignment:
Q  21 aagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 120  Q
    |||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||       ||||  ||||||||||||||||||||||||  ||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  121 ----ggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttg 216  Q
        | ||| |||||||||||||||||||          | |||| || ||||| ||||| || |||||||| |||||||||||   || ||||||||||    
T  15492962 ttaagaattatttaataaattggattttg----------taggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttg 15492873  T
Q  217 agattgtttttattttaaaagtt 239  Q
    |||||||||||||||||||||||    
T  15492872 agattgtttttattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 27899334 - 27899545
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||  |||||||||   | || ||||||||| |  |||||||||| |||||| ||  ||||||       |||| ||||||||||||||    
T  27899334 ttgtggtattcaattcagattctttccaacttaaaaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaat 27899433  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||  |||||||          | ||||||| ||||| ||||| |  | |||||||||||||||||||| ||    
T  27899434 cattcaaatttcgaaggattgtttaataaatcagattttg----------taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 27899523  T
Q  206 gagatttcttgagattgttttt 227  Q
    || |||||||  ||||||||||    
T  27899524 gaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 1440005 - 1439889
Alignment:
Q  111 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 210  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||||| ||||  |||||    | |||||||||||||| ||||| |||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  211 ttcttgagattgttttt 227  Q
    || ||  ||||||||||    
T  1439905 tttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 6131316 - 6131228
Alignment:
Q  139 gattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27240464 - 27240408
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27240464 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 52080003 - 52080065
Alignment:
Q  92 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||  |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggatttt 52080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 143  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10660478 - 10660545
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  10660478 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10660545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11431469 - 11431536
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  11431469 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagact 11431536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36674393 - 36674326
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  36674393 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 36674326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38772320 - 38772371
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgag 52  Q
    |||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  38772320 aagtcttgtggtattcaatcaagattctttgtaacttaaaaaaagtcttgag 38772371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44276332 - 44276395
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaa 64  Q
    ||||| ||||||||||||| |||| ||||||| |||| |||||||||||| |||||||||||||    
T  44276332 aagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaa 44276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3206459 - 3206394
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| |||||||||| ||||    
T  3206459 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 3206394  T

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Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23753649 - 23753584
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||    
T  23753649 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 23753584  T

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Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 539583 - 539524
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||| ||||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  539583 aagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaa 539524  T

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Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6131392 - 6131325
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||| ||||| ||||||||||||| || ||||||||| |||||||| ||| |||||||||| ||||||    
T  6131392 aagttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

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Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6131434 - 6131367
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| |||||||||||||| | ||||||||| |||||||| ||| | |||||||| ||||||    
T  6131434 aagtcttgtgttattcaatcaagatccattgtcatttaaaaaaagttttgtgttattcaatcaagact 6131367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18749513 - 18749580
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  18749513 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18749580  T

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Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27240506 - 27240439
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  27240506 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 27240439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44906776 - 44906709
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  44906776 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 44906709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 50903506 - 50903439
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  50903506 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 50903439  T

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Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1440215 - 1440151
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| | ||| ||| ||||||||||||||| | |||||||| ||||    
T  1440215 aagtcttgtggtattcaatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaaga 1440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10139409 - 10139344
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  10139409 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 10139344  T

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Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19253770 - 19253835
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  19253770 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19253835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35337678 - 35337743
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  35337678 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 35337743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37820740 - 37820675
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  37820740 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 37820675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 44276296 - 44276357
Alignment:
Q  7 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||| | | ||||| |||| ||||||||| || |||||||||||||||||    
T  44276296 tgtggtattcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagact 44276357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44762300 - 44762235
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  44762300 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T

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Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 54628788 - 54628853
Alignment:
Q  3 gtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  54628788 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 54628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 996348 - 996248
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||  || || |||||||||||| | |||||||| |||| | || |||||||       ||||||||||||||    
T  996348 aagtcttgtggtattcaatcaagactcttt-ccaattaaaaaaagtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattc 996250  T
Q  101 aa 102  Q
    ||    
T  996249 aa 996248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6589507 - 6589567
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    ||||||||||||||||||| |||| ||||| | |||| |||||||||||| | ||||||||    
T  6589507 aagtcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaat 6589567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12103574 - 12103637
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||| |||||||||||| | ||||||| |||| |||||||||| | |||||||||||||||    
T  12103574 agtcttgttgtattcaatcaatactctttgtaattt-aaaaaagtctcgtggtattcaattaaga 12103637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 40897090 - 40897154
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||||||||||||||||| ||||  | || |||||||||||| |||||||| | ||||||    
T  40897090 tcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaagact 40897154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2024150 - 2024217
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | |||||||||| |||| | ||||| | |||| ||| ||||||    
T  2024150 aagtcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagact 2024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31646547 - 31646480
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||  |||||||||| ||||||    
T  31646547 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttatggtattcaatcaagact 31646480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 50762313 - 50762246
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||| ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  50762313 aagtattgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 50762246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52618228 - 52618161
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||| ||||||||| ||||| | || ||||||||| || | |||||||| ||||||    
T  52618228 aagtcttgtggtattcgatcaagattttttgtaacttaaaaaaagtcatgtgatattcaatcaagact 52618161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53929307 - 53929248
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||||    
T  53929307 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 53929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 33808055 - 33807997
Alignment:
Q  8 gtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||| |||||||   |||| |||||||||||| | |||||||||||||    
T  33808055 gtggtattcaatcaaaattcttttcaatttaaaaaaagtcttgtgttattcaattaaga 33807997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20498152 - 20498217
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||| ||||    
T  20498152 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 20498217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 33807719 - 33807678
Alignment:
Q  183 gaaaaagtctttcatgaaaagatgagatttcttgagattgtt 224  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  33807719 gaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40246787 - 40246852
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| ||||| |  ||| |||||| ||||| | |||||||| ||||    
T  40246787 aagtcttgtggtattcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaaga 40246852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 51701560 - 51701807
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattca 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||    
T  51701560 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 51701659  T
Q  102 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  51701660 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 51701759  T
Q  202 agatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51701760 agatgagattttttgagattgtttttattttaaaagttactatctttt 51701807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 6312553 - 6312801
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  6312553 aagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 6312652  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  6312653 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 6312752  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312753 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 6312801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 25612136 - 25612384
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||       ||||||||||||||    
T  25612136 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattc 25612235  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  25612236 aaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaa 25612335  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25612336 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 25612384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 29396606 - 29396364
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||    
T  29396606 tcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 29396507  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  29396506 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 29396407  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  29396406 atgagatttcttgagattgtttttgttttaaaagttactatct 29396364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 15835274 - 15835029
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||        |||||||||||||    
T  15835274 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattc 15835175  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15835174 aaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 15835075  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15835074 aagatgagatttcttgagattgtttttgttttaaaagttactatct 15835029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 249
Target Start/End: Complemental strand, 9322716 - 9322473
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||       ||| |||||||||||||||    
T  9322716 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaat 9322617  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  9322616 cattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 9322517  T
Q  206 gagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  9322516 gagatttcttgagattgtttttattttaaaatttactatctttt 9322473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28387614 - 28387369
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||    
T  28387614 aagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 28387515  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || || |||||||||||||| ||    
T  28387514 aaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaa 28387415  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  28387414 aagatgagatttcttgagattgtttttgttttaaaagttattatct 28387369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 46328021 - 46328266
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||| |||||||||    
T  46328021 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattc 46328120  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||    
T  46328121 aaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaa 46328220  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||| |||||||| || ||||||||| ||||||||||||||||||    
T  46328221 aagataagatttctcgaaattgtttttcttttaaaagttactatct 46328266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 48177680 - 48177442
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || | ||||||||| ||       |||||||||||||||||    
T  48177680 tcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaa 48177581  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  48177580 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 48177481  T
Q  204 atgagatttcttgagattgtttttattttaaaagttact 242  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  48177480 atgagatttcttgagattgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38536310 - 38536075
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| | ||       ||||||||||||||    
T  38536310 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattc 38536211  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||| || ||||||||||||||||||||    
T  38536210 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaa 38536121  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  38536120 aagatgagatttcttgagattgtttttcttttaaaagttacaatct 38536075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38558528 - 38558293
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| | ||       ||||||||||||||    
T  38558528 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattc 38558429  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||| || ||||||||||||||||||||    
T  38558428 aaaattattcaaatttcaaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaa 38558339  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  38558338 aagatgagatttcttgagattgtttttcttttaaaagttacaatct 38558293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 18798470 - 18798691
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  18798470 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 18798569  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||| || ||||||||||||||||||||    
T  18798570 aaaatcattcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtctttcatgaa 18798649  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    |||||||||||||| |||||||||||| ||||||||||||||    
T  18798650 aagatgagatttctagagattgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 29219267 - 29219493
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||| |||||||| |||||||||||||| ||       ||||||||||||||    
T  29219267 aagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 29219364  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||          ||||||||||||||||||| || |||||||||| |||||||||    
T  29219365 aaaatcattcaaattaagaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtatttcatgaa 29219454  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagtt 239  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  29219455 aagatgagatttcttgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 35279655 - 35279865
Alignment:
Q  5 cttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaa 104  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||||||    
T  35279655 cttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaa 35279754  T
Q  105 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaaga 204  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||||| | |||||||||||||||||||| |    
T  35279755 tcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaaca 35279854  T
Q  205 tgagatttctt 215  Q
    |||||||||||    
T  35279855 tgagatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 35679349 - 35679125
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||| |||||| || |||| ||       ||| ||||||||||    
T  35679349 aagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattc 35679250  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  35679249 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 35679150  T
Q  201 aagatgagatttcttgagattgttt 225  Q
     | |||||||||||| |||||||||    
T  35679149 gacatgagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9577653 - 9577418
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| |||| ||||||||||||||  |||||||||||||||||||||||||| |||| ||| || |||||| |||| ||       |||||||| |||||    
T  9577653 aagtattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattc 9577554  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||||| ||||| |  | |||||| |||||||||||    
T  9577553 aaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaa 9577454  T
Q  201 aagatgagatttcttgagattgtttttattttaaaa 236  Q
    || ||||||||||||| |||||||||| ||||||||    
T  9577453 aacatgagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19452029 - 19451803
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||| || |||| ||       |||| |||||||||    
T  19452029 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattc 19451930  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  19451929 aaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 19451830  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  19451829 aacatgagatttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 21222131 - 21222349
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| | ||||||||||||    
T  21222131 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaat 21222230  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||    
T  21222231 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacat 21222330  T
Q  206 gagatttcttgagattgtt 224  Q
    ||||||||||  |||||||    
T  21222331 gagatttcttaggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28824593 - 28824368
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||| |||||| || |||| ||       ||||||||||||||    
T  28824593 aagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattc 28824494  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||| | ||||| || | |||||||||||| || ||    
T  28824493 aaaatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaa 28824395  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  28824394 aacatgagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 50192769 - 50192545
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtattcaa 102  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| || |||| ||        |||| |||||||||||    
T  50192769 tcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaa 50192670  T
Q  103 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 202  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||||    
T  50192669 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 50192570  T
Q  203 gatgagatttcttgagattgttttt 227  Q
     ||||||||| ||  ||||||||||    
T  50192569 catgagattttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 5495317 - 5495117
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||| |||||||||    
T  5495317 aagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 5495218  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||          ||||||||||||||||||||| || ||||||||||| || |||||    
T  5495217 aaaatcatttaaatttcaaaggattatttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtcctttatgaa 5495128  T
Q  201 aagatgagatt 211  Q
    |||||||||||    
T  5495127 aagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 49230865 - 49231008
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  49230865 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 49230964  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggatttt 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  49230965 aaaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 49198489 - 49198264
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||| || |||| ||       ||   |||||||||    
T  49198489 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattc 49198391  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  49198390 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 49198291  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||| |||||||  ||||||||||    
T  49198290 aacatgatatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 45760231 - 45760004
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||| || |||||||||| |||||| || |||| ||       |||| ||||||||    
T  45760231 aagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 45760132  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| ||| ||||    
T  45760131 caaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatga 45760032  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||||||  ||||||||||    
T  45760031 aaacatgagatttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 47780690 - 47780916
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| | |||||||| ||||||||| || |||||||||| |||||| || |||| ||       |||| ||| |||||    
T  47780690 aagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattc 47780789  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||| ||  ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| || | |||||||| |||||||||    
T  47780790 aaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaa 47780889  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  47780890 aacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 6304468 - 6304247
Alignment:
Q  7 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga-cttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||||||||  || | || || |||| ||       |||| ||||||||||||||    
T  6304468 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 6304369  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||    
T  6304368 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6304269  T
Q  206 gagatttcttgagattgttttt 227  Q
    || |||||||  ||||||||||    
T  6304268 gaaatttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 45272569 - 45272799
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    |||||| |||||||||||| | |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||        ||| ||||||||||||    
T  45272569 tcttgttgtattcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaa 45272667  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    || ||| |||||||||||||| ||||||||||||||||||||          || |||||||||||||||||| || |||||||| ||||| || |||||    
T  45272668 attatttaaatttcgaaggat-gtttaataaattggattttg----------tgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaag 45272756  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||| |||||||||||||| |||||||||||| |||||    
T  45272757 atgagattttttgagattgtttttcttttaaaagttattatct 45272799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 48668988 - 48668770
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaat 105  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| |    ||||||||| ||       |||  ||||||||||||||    
T  48668988 ttgtgatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaat 48668892  T
Q  106 cattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 205  Q
     |||||||||||||| ||||||||||||||||||||||||          ||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  48668891 tattcaaatttcgaaagattgtttaataaattggattttg----------tgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 48668802  T
Q  206 gagatttcttgagattgtttttattttaaaag 237  Q
    ||||||| ||| |||||||||| |||||||||    
T  48668801 gagatttgttgggattgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 49418063 - 49418277
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| |  || ||||||||||||||||| || |||| ||       |||| |||||||||    
T  49418063 aagtcttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattc 49418162  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| || || ||||| |  | |||||| |||||||||||    
T  49418163 aaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaa 49418262  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  49418263 aatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 37014860 - 37014635
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattca 101  Q
    |||||||||||||||||| |||| ||||||||||||  || |||||||| |||||||||| || | | ||||||| ||       |||||||| ||||||    
T  37014860 agtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattca 37014761  T
Q  102 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaa 201  Q
    |||||||||||||||| || |||||||| |||||||| ||||||||||||||| | ||||||| ||||| ||||| |  | |||||||||| |||| |||    
T  37014760 aaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaa 37014661  T
Q  202 agatgagatttcttgagattgttttt 227  Q
    | |||||||||||| |||||||||||    
T  37014660 acatgagatttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 45535923 - 45536124
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| |||||||||||||| || ||||| ||| |||||||||| |||||| || |||  ||       |||| |||||||||    
T  45535923 aagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattc 45536022  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  45536023 aaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 45536122  T
Q  201 aa 202  Q
    ||    
T  45536123 aa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 47654568 - 47654346
Alignment:
Q  6 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 104  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||| || ||| || |||| ||        |||| |||||||||||||    
T  47654568 ttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaa 47654469  T
Q  105 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaaga 204  Q
    | ||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| ||| | ||||| |  | |||||||| ||||||||||| |    
T  47654468 ttattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaaca 47654369  T
Q  205 tgagatttcttgagattgttttt 227  Q
    |||||||||||  ||||||||||    
T  47654368 tgagatttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 32589171 - 32588963
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    |||| |||||||||||||||| ||||| |||||  | || | ||||| || ||||||| |||||| ||||||| ||       |||||||||||||||||    
T  32589171 tcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaa 32589072  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||| ||||| ||||| |  |  |||||||||||||||||||     
T  32589071 atcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaac 32588972  T
Q  204 atgagattt 212  Q
    |||||||||    
T  32588971 atgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29556083 - 29556310
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||| ||||||| |||| |||| |||||||||||| | |||||||| |||||| || |||| ||        ||| ||| |||||    
T  29556083 aagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattc 29556182  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || || ||||| |    |||||||||||| |||||    
T  29556183 aaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaa 29556282  T
Q  201 a-agatgagatttcttgagattgttttt 227  Q
    | | ||||||||||||  ||||||||||    
T  29556283 acacatgagatttcttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 730127 - 730303
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||        |||| ||||||||    
T  730127 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtatt 730226  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||||||||||| || |||||| ||||| |||||    
T  730227 caaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattt 730303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  90 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaag 189  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| | || |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  190 tctttcatgaaaagatgagatttctt 215  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 48524298 - 48524490
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| || || |||||| ||| || ||| || |||| ||       |||||||| |||||    
T  48524298 aagtcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattc 48524397  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctt 193  Q
    |||||||||||||||| ||| |||||||||||||||  | |||||||||||||| ||||||||| ||||| ||||| || | |||||||||||    
T  48524398 aaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8141349 - 8141243
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||       |||||| |||||||    
T  8141349 aagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattc 8141250  T
Q  101 aaaatca 107  Q
    |||||||    
T  8141249 aaaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 33025502 - 33025645
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga-cttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 110  Q
    |||||||||||||||||||| |||||| ||||| ||||| |||||||||| || | || || |||| ||       ||||||||||||||||||||||||    
T  33025502 tattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattc 33025601  T
Q  111 aaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||| |||||||||||||||| ||  |||||||  |||||||    
T  33025602 aaattttgaaggattgtttaatacatcagattttgtgggatttt 33025645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 47784366 - 47784509
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||| | ||||  | || |||||||||||| |||||||||| |||||| ||  ||||||       ||||||||||||||    
T  47784366 aagtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattc 47784464  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    ||||| ||||||| ||| || ||||||||||||||||||||||||    
T  47784465 aaaattattcaaacttctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 953798 - 953865
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||    
T  953798 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagact 953865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  95 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 22183349 - 22183457
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||| | || |||| ||       |||| |||||||||    
T  22183349 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattc 22183448  T
Q  101 aaaatcatt 109  Q
    |||||||||    
T  22183449 aaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 51085860 - 51085937
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 164  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||| ||||| ||| |||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaatttt 51085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14494188 - 14494237
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttg 50  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  14494188 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6312511 - 6312578
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||| ||| |||||||||||||||||    
T  6312511 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaagact 6312578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15835316 - 15835249
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  15835316 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 15835249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19452113 - 19452046
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| |||||||||| ||||||    
T  19452113 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 19452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  90 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28824635 - 28824570
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| ||||| | |||| |||||||||||| | |||||||| ||||    
T  28824635 aagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 28824570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49198530 - 49198466
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||||||| | |||||||| ||||    
T  49198530 aagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaaga 49198466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 25612097 - 25612161
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  25612097 tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 25612161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21222168 - 21222227
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| |||||||||||    
T  21222168 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaa 21222227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29219225 - 29219292
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  29219225 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 29219292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 730085 - 730150
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  730085 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 730150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 953756 - 953821
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  953756 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 953821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 18798430 - 18798495
Alignment:
Q  3 gtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  18798430 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18798495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19452071 - 19452006
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  19452071 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19452006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29556041 - 29556106
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||| ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  29556041 aagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaaga 29556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35679391 - 35679326
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||  |||||   |||| |||||||||||| |||||||||| ||||    
T  35679391 aagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 35679326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 43885203 - 43885158
Alignment:
Q  109 tcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggatttt 43885158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50192814 - 50192749
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||||||||||||   |||| |||||| ||||| | |||||||| ||||    
T  50192814 aagtcttgtggtattcaatcaagattctttccaatttaaaaaaaatcttgtgttattcaatcaaga 50192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8141391 - 8141324
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||| ||| |||||||||| ||||||    
T  8141391 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 8141324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29396567 - 29396508
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||| ||||||||||||||| | ||  |||||| |||||||||||| |||||||||    
T  29396567 aagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 29396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29396651 - 29396584
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||| ||||  |||||||||| ||||||    
T  29396651 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttttggtattcaatcaagact 29396584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37014819 - 37014760
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||| ||||||  ||| || |||||||||||| | |||||||    
T  37014819 aagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaa 37014760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 49230823 - 49230890
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||| |||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  49230823 aagtcatgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagact 49230890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 51701517 - 51701584
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||| ||||||||||||||||||| | ||||  |||| |||| ||||||| |||||||||| ||||||    
T  51701517 aagttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagact 51701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51701601 - 51701660
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||| ||||||||||||||| | ||  |||||| |||||||||||| |||||||||    
T  51701601 aagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 51701660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 14494149 - 14494211
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  14494149 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 14494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  34 attttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22183307 - 22183372
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||| ||||    
T  22183307 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 22183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28387656 - 28387591
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||| |||||||||||||||| | ||||  |||| |||||||||||  |||||||||| ||||    
T  28387656 aagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaaga 28387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35279609 - 35279674
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| ||||||| |||| | |||||||| ||||    
T  35279609 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagacttgtgttattcaatcaaga 35279674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45760273 - 45760208
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||| | |||||   |||| |||||||||||| | |||||||| ||||    
T  45760273 aagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 45760208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 33025664 - 33025696
Alignment:
Q  183 gaaaaagtctttcatgaaaagatgagatttctt 215  Q
    |||||||||||||||||||| ||||||||||||    
T  33025664 gaaaaagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48177725 - 48177665
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||||||||||||||||||| | ||||  | || |||||| ||||| ||||||||||    
T  48177725 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaat 48177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 31895681 - 31895929
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||       ||||||||||||||    
T  31895681 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 31895780  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||    
T  31895781 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaa 31895880  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31895881 aagatgagatttcttgagattgtttttattttaaaagttactatctttt 31895929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 14262653 - 14262412
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||       ||||||||||||||    
T  14262653 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattc 14262554  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  14262553 aaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14262454  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  14262453 aagatgggatttcttgagattgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 34759271 - 34759025
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||       |||||||||||||    
T  34759271 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtatt 34759172  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||    
T  34759171 caaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatga 34759072  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  34759071 aaagatgagatttcttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 34773394 - 34773608
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||    
T  34773394 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 34773493  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||    
T  34773494 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaa 34773593  T
Q  201 aagatgagatttctt 215  Q
    |||||||||||||||    
T  34773594 aagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 7497069 - 7497305
Alignment:
Q  9 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 108  Q
    |||||||||||||||| |  |||  | || |||||||||||| |||||||||| |||| ||||||||| ||       ||||||||||||||||||||||    
T  7497069 tggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 7497168  T
Q  109 tcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgag 208  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  7497169 tcaaatttcgaaggagtgtttaataaattggattttgatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 7497267  T
Q  209 atttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  7497268 atttcttgagattatttttcttttaaaagttactatct 7497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30385277 - 30385044
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || | ||||||||| ||       ||||||||||||||    
T  30385277 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattc 30385178  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| || |  | |||||||||||||||    
T  30385177 aaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaaca--acaaagtctttcatgaa 30385090  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||    
T  30385089 aagatgagatttcttgagattgtttttcttttaaaaattactatct 30385044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 6197698 - 6197472
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  6197698 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 6197599  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  6197598 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 6197499  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  6197498 aacatgagatttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2300958 - 2300744
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       ||||  |||||||     
T  2300958 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattg 2300859  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  2300858 aaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 2300759  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  2300758 aacatgagatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 31067567 - 31067716
Alignment:
Q  90 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaag 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| || |||||||||    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  190 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31067657 tctttcataaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 31067716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 1391609 - 1391835
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||| ||||||||| || ||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  1391609 aagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 1391708  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | ||||||||||||||||||    
T  1391709 aaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaa 1391808  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||| |||  ||||||||||    
T  1391809 aacatgagattccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 7051830 - 7052044
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||| ||||| |||| |||||| ||||||| ||       ||| |||| |||||    
T  7051830 aagtcttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattc 7051929  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||  ||||| |  | |||||||| |||||| ||    
T  7051930 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaa 7052029  T
Q  201 aagatgagatttctt 215  Q
    |  ||||||||||||    
T  7052030 atcatgagatttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 4200541 - 4200409
Alignment:
Q  107 attcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| || ||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  207 agatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4200451 agatttcttgagattgtttttattttaaaagttactatctttt 4200409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29076583 - 29076810
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||  ||| | || |||| ||        |||| || |||||    
T  29076583 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtatt 29076682  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||| |  | |||||| |||||||| |    
T  29076683 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataa 29076782  T
Q  200 aaagatgagatttcttgagattgttttt 227  Q
    ||| ||||||||| ||  ||||||||||    
T  29076783 aaacatgagattttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29111556 - 29111784
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn--gtcttgtggtat 98  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||  ||| | || |||| ||         |||| || ||||    
T  29111556 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtat 29111655  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||| |  | |||||| ||||||||     
T  29111656 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcata 29111755  T
Q  199 aaaagatgagatttcttgagattgttttt 227  Q
    |||| ||||||||| ||  ||||||||||    
T  29111756 aaaacatgagattttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 28002650 - 28002856
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||  ||||||||||||||| |||||||||| |||||||||||  |||||||||| |||||| || |||| ||       |||| ||| |||||    
T  28002650 aagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattc 28002749  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||  ||||| ||||| ||||| |  | ||||||||||||||||||    
T  28002750 aaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaa 28002849  T
Q  201 aagatga 207  Q
    || ||||    
T  28002850 aacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 3848200 - 3848347
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||| | | |||||||||| ||| |||| ||| |||| ||||| |||||||  ||||| ||       || ||||||||||||||    
T  3848200 tcttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaa 3848297  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||| |||||| ||| ||||||||||||||||| |||||| ||||||||    
T  3848298 atcatttaaattttgaatgattgtttaataaattgaattttg-tggatttt 3848347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  7 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 106  Q
    |||| |||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  107 attcaaattt 116  Q
    ||||||||||    
T  657056 attcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31895639 - 31895706
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  31895639 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 31895706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34773352 - 34773419
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  34773352 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 34773419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3848107 - 3848167
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||| ||||||||||||||||||||||||  | || |||||||||||| ||||||||||    
T  3848107 aagtctggtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaat 3848167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 14262692 - 14262628
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||||||||||||||||| ||||  | || |||||||||||| |||||||||| ||||||    
T  14262692 tcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 14262628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7497103 - 7497162
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||||| ||  ||| || |||||||||||| |||||||||    
T  7497103 aagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 7497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1391567 - 1391632
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  1391567 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 1391632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2301000 - 2300935
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  2301000 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 2300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  183 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 656992 - 657049
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattc 58  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||    
T  656992 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 657049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3848149 - 3848225
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcatt------ttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||||||||||||||||||||| ||| |||||||||      |||||||| ||||| |||||||||| || ||||||    
T  3848149 aagtcttgtggtattcaatcaatattttttgtcatttgcaaattaaaaaattcttgtggtattcaatcaaaactttt 3848225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6197740 - 6197675
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||| |||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  6197740 aagtcgtgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 6197675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 14000322 - 14000077
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||    
T  14000322 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 14000223  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  14000222 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 14000123  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14000122 atgagatttcttgagattgtttttattttaaaagttactatctttt 14000077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1152323 - 1152078
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||       ||||||||||||||    
T  1152323 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattc 1152224  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||    
T  1152223 aaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaa 1152124  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  1152123 aagatgagatttcttaagattgtttttcttttaaaagttactatct 1152078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13925917 - 13926162
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| | ||       ||||||||||||||    
T  13925917 aagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattc 13926016  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| |||    
T  13926017 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaa 13926116  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||    
T  13926117 aagatgatatttcttgagattgtttttcttctaaaagttactatct 13926162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 4550477 - 4550246
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  4550477 aagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 4550378  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||| |||||||||||||    
T  4550377 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaa 4550278  T
Q  201 aagatgagatttcttgagattgtttttatttt 232  Q
    |||||||||||| |||||||||||||| ||||    
T  4550277 aagatgagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 4240669 - 4240434
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaa 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||||||||||||    
T  4240669 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 4240570  T
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||| || |||||||||||||||||||| ||    
T  4240569 atcattcaaatttcgaaggattgtttaataaattggattttgatgga----------ttttgtagtgtaattttaacaagaaaaagtctttcatgaatag 4240480  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  4240479 atgagatttcttgagattgtttttcttttaaaagttactatctttt 4240434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 39852372 - 39852576
Alignment:
Q  42 aaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat 141  Q
    |||||||||||||||||||| ||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  142 tttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttac 241  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttac 39852571  T
Q  242 tatct 246  Q
    |||||    
T  39852572 tatct 39852576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 246
Target Start/End: Complemental strand, 7947779 - 7947548
Alignment:
Q  15 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||| | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  115 ttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttct 214  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  215 tgagattgtttttattttaaaagttactatct 246  Q
    ||| ||||||||| |||||||||||| |||||    
T  7947579 tgaaattgtttttcttttaaaagttaatatct 7947548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 40013922 - 40013687
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||| |||||    
T  40013922 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattc 40013823  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||          |||||||||||| || ||||||||||||||||||||    
T  40013822 aaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaa 40013733  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||    
T  40013732 aagatgagatttcttgagattgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 5949095 - 5949329
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||| ||        |||||||||||||    
T  5949095 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattc 5949193  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||| || ||||||||||||||||||||    
T  5949194 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaa 5949283  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  5949284 aagatgagatttcttgagattgtttttcttttaaaagttattatct 5949329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 1461357 - 1461125
Alignment:
Q  2 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattca 101  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||       |||||| | ||||||    
T  1461357 agtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattca 1461258  T
Q  102 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||| |||||||| || |||||||| ||||||||||||    
T  1461257 aaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtactgtaattttaacaagaaaaaatctttcatgaaa 1461168  T
Q  202 agatgagatttcttgagattgtttttattttaaaagttactat 244  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  1461167 agatgagatttcttgagattgtttttcttttaaaagttactat 1461125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 21147053 - 21147279
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  21147053 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 21147152  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  21147153 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 21147252  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  21147253 aacatgagatttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22746283 - 22746501
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||| ||       |||||||| |||||    
T  22746283 aagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattc 22746382  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||        |||||||| || |||||||| |||||||||||    
T  22746383 aaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaa 22746474  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    ||||| ||||||||| |||||||||||    
T  22746475 aagataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 37013900 - 37014124
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||       |||||| |||||||    
T  37013900 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattc 37013999  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||| |||||||||||||||||                    ||||||||| |||||| || ||||||||||||||||| ||    
T  37014000 aaaatcattcaaatttcgaagggttgtttaataaattgga--------------------ttttgtagtataattttaacaagaaaaagtctttcataaa 37014079  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatc 245  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  37014080 aagatgagatttcttgagattgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5273139 - 5272925
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||| |||||| || |||||||       |||| |||||||||    
T  5273139 aagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattc 5273040  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| ||    
T  5273039 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 5272940  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  5272939 aacatgagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33656263 - 33656035
Alignment:
Q  1 aagtcttgtggtattcaatcaagattcttt--gtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtat 98  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||||||||| |||||||||| |||||| || |||| ||        |||  ||||||    
T  33656263 aagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtat 33656164  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||    
T  33656163 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 33656064  T
Q  199 aaaagatgagatttcttgagattgttttt 227  Q
    |||| ||||||||||||  ||||||||||    
T  33656063 aaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 139259 - 139473
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||||| || |||||||||| ||||||||| |||| ||       |||| |||||||||    
T  139259 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattc 139358  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||| | |||||||  |||| ||||| || | ||||||||||||||| ||    
T  139359 aaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaa 139458  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  139459 aacatgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 7016959 - 7016745
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||   |||| ||||||||||||  ||||||||| |||||| || |||| ||       |||| |||||||||    
T  7016959 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 7016860  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| ||    
T  7016859 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 7016760  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  7016759 aacatgagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27459169 - 27458944
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||  ||||||||| |||||| || |||| ||       |||| |||||||||    
T  27459169 aagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattc 27459071  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| || ||||||||    
T  27459070 aaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaa 27458971  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||| |||||||  ||||||||||    
T  27458970 aacatgatatttcttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 32158118 - 32157891
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||   | |||| ||        |||| ||||||||    
T  32158118 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtatt 32158019  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt---caagaagaaaaagtctttca 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||  |||||   || ||| ||| |||||||||    
T  32158018 caaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttca 32157919  T
Q  197 tgaaaagatgagatttcttgagattgtt 224  Q
    |||||| |||||||||||| | ||||||    
T  32157918 tgaaaacatgagatttcttaaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6460778 - 6460953
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||| || |||||||||||||||||||||||||| ||||||||| ||  ||||||||| |||||| || |||||||        ||| |||||||||    
T  6460778 aagtcttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattc 6460877  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||||  |||||||| ||||| |||||    
T  6460878 aaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattt 6460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 14465438 - 14465279
Alignment:
Q  10 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 109  Q
    ||||||||||||||| |||||||||||| |||||||| ||  |||||||||| |||||| ||||||  ||       |||||||||||||||||||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcatt 14465339  T
Q  110 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagt 169  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||| ||| ||||| ||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    ||||||||||| |||||||||| |||||| || |||| ||       ||||  ||||||||||||||||||||||||||||||||||||||||||||  |    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  140 attttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 202  Q
    |||||||| |||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 9689654 - 9689869
Alignment:
Q  9 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 108  Q
    |||||||||||||||| |||| ||||||| ||||||   | | |||||||||| |||||| ||||||| ||       ||||||||||||| ||||||||    
T  9689654 tggtattcaatcaagactctt-gtcatttaaaaaaaca-tcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcat 9689751  T
Q  109 tcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgag 208  Q
    | |||||||||| |||||||| ||||||| |||||||||||||| | || |||||| | ||  ||||| |  | ||||||||||||||| |||| || ||    
T  9689752 t-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataag 9689850  T
Q  209 atttcttgagattgttttt 227  Q
    |||||||  ||||||||||    
T  9689851 atttcttatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 9220916 - 9220772
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    ||||||||||| | ||||||||||||  ||||||||||| | |||||||| |||||| || |||| ||       ||||| || ||||||||||||||||    
T  9220916 tattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattca 9220817  T
Q  112 aatttcgaaggattgtttaataaattggattttgatggattttat 156  Q
    |||||| |||||||||||||| |||| || ||||  |||||||||    
T  9220816 aatttctaaggattgtttaatgaattagaatttgtaggattttat 9220772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5273181 - 5273116
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||| | |||||||| ||||    
T  5273181 aagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaaga 5273116  T

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Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 16894119 - 16894055
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||||||||||||| |||||||   |||| |||||||||||| |||||||||| ||||||    
T  16894119 tcttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaagact 16894055  T

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Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4550519 - 4550452
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  4550519 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 4550452  T

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Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 5273220 - 5273153
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    |||||||||||||||||||||||||||   |||| |||||||||||| | |||||||| |||| ||||    
T  5273220 tcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14000367 - 14000300
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||| ||||| |||||||||| ||||||    
T  14000367 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaagact 14000300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37013858 - 37013925
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  37013858 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 37013925  T

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Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40013964 - 40013897
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| ||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  40013964 aagtcttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 40013897  T

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Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33656305 - 33656240
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  33656305 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 33656240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 1152362 - 1152298
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||| |||||||||| ||||  | || |||||||||||| |||||||||| ||||||    
T  1152362 tcttgtggtatttaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 1152298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14000283 - 14000224
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||| ||||||||||||||| | ||  |||||| |||||||||||| |||||||||    
T  14000283 aagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 14000224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21147011 - 21147076
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||| |||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  21147011 aagtcgtgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 21147076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27459211 - 27459146
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||| || |||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  27459211 aagtctcgtagtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaaga 27459146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9220885 - 9220837
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtctt 49  Q
    |||||||||| ||||||||||||| ||||| ||| || |||||||||||    
T  9220885 aagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtctt 9220837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32158161 - 32158095
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcatttt--aaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| ||||| ||| |||  |||||||||||| | |||||||| ||||    
T  32158161 aagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaaga 32158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10546 - 10791
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||        |||||||||||||    
T  10546 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattc 10645  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10646 aaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 10745  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10746 aagatgagatttcttgagattgtttttgttttaaaagttactatct 10791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10504 - 10571
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  10504 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 7e-98; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 28844542 - 28844787
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  28844542 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 28844641  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||| ||    
T  28844642 aaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaa 28844741  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  28844742 aagatgagatttcttgagattgtttttcttttaaaagttagtatct 28844787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 12 - 248
Target Start/End: Original strand, 18177265 - 18177501
Alignment:
Q  12 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       || ||||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  112 aatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| || |||||||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  212 tcttgagattgtttttattttaaaagttactatcttt 248  Q
    |||||||||||||||||||||||||||||||||||||    
T  18177465 tcttgagattgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10657393 - 10657638
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  10657393 aagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 10657492  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||    
T  10657493 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaa 10657592  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  10657593 aagatgaaatttcttgagattgtttttcttttaaaaggtactatct 10657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 26788771 - 26789018
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn--gtcttgtggtat 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||    
T  26788771 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtat 26788870  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||     
T  26788871 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat- 26788969  T
Q  199 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788970 --aagatgagatttcttgagattgtttttattttaaaagttactatctttt 26789018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33135610 - 33135854
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||| |||||||||    
T  33135610 aagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 33135709  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||    
T  33135710 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aa 33135808  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    || |||||||||||||||||||||||| |||||||||||| |||||    
T  33135809 aaaatgagatttcttgagattgtttttcttttaaaagttattatct 33135854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 7 - 244
Target Start/End: Original strand, 25288152 - 25288389
Alignment:
Q  7 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||        |||||||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  107 attcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  207 agatttcttgagattgtttttattttaaaagttactat 244  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25288352 agatttcttgagattgtttttcttttaaaagttactat 25288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28740506 - 28740275
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  28740506 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 28740407  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||| || ||||||||||||||||| ||    
T  28740406 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgga----------ttttgtggtgtaattttaacaagaaaaagtctttcataaa 28740317  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttact 242  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  28740316 aagatgagatttcttgagattgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 3463669 - 3463894
Alignment:
Q  12 tattcaatcaagat-tctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 110  Q
    |||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||       ||||||||||||| ||||||||||    
T  3463669 tattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattc 3463768  T
Q  111 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 210  Q
    || |||| |||||||||||||||||||||||||||||          ||||||||||||||||||| || |||||||||||||||||||||| |||||||    
T  3463769 aattttcaaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagat 3463858  T
Q  211 ttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3463859 ttcttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13833645 - 13833410
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||| |||||||||||||| ||       ||||| ||||||||    
T  13833645 aagtcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattc 13833546  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||          ||||||||||||||||||||| || |||||||||||||||||||     
T  13833545 aaaatcattcaaattttgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgac 13833456  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||    
T  13833455 aagatgagatttcttgagattgcttttcttttaaaaattactatct 13833410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16269678 - 16269904
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  16269678 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 16269777  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  16269778 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaa 16269877  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  16269878 aacatgagatttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24776342 - 24776568
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  24776342 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 24776441  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  24776442 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 24776541  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  24776542 aacatgagatttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7026591 - 7026744
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  7026591 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 7026690  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026691 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 7026744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12407367 - 12407593
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||| || |||| ||       |||| |||||||||    
T  12407367 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattc 12407466  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  12407467 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaa 12407566  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||||||| |||||||||||    
T  12407567 aacatgagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 20605223 - 20605449
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  20605223 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 20605322  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  20605323 aaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 20605422  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  20605423 aacatgagatttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 31170847 - 31170621
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  31170847 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 31170748  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  31170747 aaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 31170648  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  31170647 aacatgagatttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 14198800 - 14198574
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||  |||||||||    
T  14198800 aagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattc 14198701  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| |||||||||||    
T  14198700 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaa 14198601  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  14198600 aacatgagatttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22551986 - 22551760
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| |||| ||       |||| |||||||||    
T  22551986 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattc 22551887  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||| |||||||||||||| ||||||||| ||||||  ||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| |||||||||    
T  22551886 aaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaa 22551787  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  22551786 aacatgagatttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 43847633 - 43847859
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| || ||||||    
T  43847633 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattc 43847732  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||||||||| ||| ||||| ||||| ||||| |  | |||||||||| |||||||    
T  43847733 aaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaa 43847832  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  43847833 aacatgagatttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 6224771 - 6224545
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatca-tttnnnnnnngtcttgtggtatt 99  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||       |||||||||||||    
T  6224771 aagtcatgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtatt 6224672  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||| ||||||||||||||||||| ||||||||||||||||                    |||||||||||||| || |||||||||||||||||||    
T  6224671 caaaattattcaaatttcgaaggattatttaataaattggatt--------------------ttgtagtgtaattttaacaagaaaaagtctttcatga 6224592  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  6224591 aaagatgagatttcttgatattgtttttcttttaaaagttactatct 6224545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5093270 - 5093044
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||  || |||| ||       |||| || ||||||    
T  5093270 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattc 5093171  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| || || ||||| |  | ||||||||||||||| ||    
T  5093170 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaa 5093071  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || ||||||||||||  ||||||||||    
T  5093070 aacatgagatttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 35317049 - 35317275
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||||||||   |||||||| |||||| || |||| ||       |||| |||||||||    
T  35317049 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 35317148  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| ||||| ||||| |  | ||||||||||||||||||    
T  35317149 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 35317248  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || || ||||||||| | |||||||||    
T  35317249 aacataagatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 305688 - 305464
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| |||||||||    
T  305688 aagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 305589  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| ||| |||||||||||||||  ||||| |||||||||| || |||||| ||||| ||||| |  | ||||||||||||||||||    
T  305588 aaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaa 305489  T
Q  201 aagatgagatttcttgagattgttt 225  Q
    || ||||||||||||  ||||||||    
T  305488 aacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 215448 - 215216
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||       |||| |||||||||    
T  215448 aagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 215349  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||| ||| |||||||||||     ||||   ||| ||  |||     ||||||||||||||||||| ||  |||||||||||||||||||    
T  215348 aaaatcattcaaacttcaaaggattgttt----gattg---tttaataaatt-----ggattttgtagtgtaattttaa-cagaaaaagtctttcatgaa 215262  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  215261 aagatgagatttcatgagattgtttttcttttaaaagttactatct 215216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 32125237 - 32125454
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcat---catttnnnnnnngtcttgtggta 97  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||| || |||||||||| |||||| || ||   |||||       |||  ||||||    
T  32125237 aagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggta 32125336  T
Q  98 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcat 197  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||  ||||| |  | |||||||||||||||    
T  32125337 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcat 32125436  T
Q  198 gaaaagatgagatttctt 215  Q
    ||||| ||||||||||||    
T  32125437 gaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 43078653 - 43078795
Alignment:
Q  104 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaag 203  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| || | ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  204 atgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    || ||||||||||||||||||||| |||||||||||| |||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaagttagtatct 43078795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 378924 - 379159
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| || ||||||  ||||||       || |  ||||||||    
T  378924 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattc 379023  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||          |||||||||||||| || |||||||| || ||||||||    
T  379024 aaaatcattcaaattttgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaagaaaaaatcgttcatgaa 379113  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||    
T  379114 aagatgagatttattgagattgtttttcttttaaaacttactatct 379159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3574834 - 3574978
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||| |||||    
T  3574834 aagttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattc 3574933  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3574934 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 44765762 - 44765937
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||| || |||| ||       |||| |||||||||    
T  44765762 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattc 44765861  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 176  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  44765862 aaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattt 44765937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 10125515 - 10125285
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtctt--gaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtat 98  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||| || ||||||||||| ||       ||||  || |||    
T  10125515 aagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatat 10125416  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||          ||||||||| ||||| ||||| || |||||||||||||||||     
T  10125415 tcaaaatcattcaaatttcaaaggattgtttaataaattgaattttg----------tgggattttttagtgaaattttaacaagaaaaagtctttcata 10125326  T
Q  199 aaaagatgagatttcttgagattgtttttattttaaaagtt 239  Q
    |||| | |||||||||| ||||||||||| |||||||||||    
T  10125325 aaaacacgagatttcttaagattgtttttcttttaaaagtt 10125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1789429 - 1789630
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||  | |||||||| || ||| || |||| ||       |||| |||||||||    
T  1789429 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattc 1789528  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| || || ||||| |  | ||||||||||||||| ||    
T  1789529 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaa 1789628  T
Q  201 aa 202  Q
    ||    
T  1789629 aa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 9120119 - 9120339
Alignment:
Q  7 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatc 106  Q
    |||||||||||||||||| |||||   ||||||||||||||||| | |||||||| |||| | || |||| ||        ||| ||| |||||||||||    
T  9120119 tgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatc 9120218  T
Q  107 attcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatg 206  Q
    ||||| ||||  ||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |  | | |||| ||||||||||||| |||    
T  9120219 attcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatg 9120318  T
Q  207 agatttcttgagattgttttt 227  Q
    |||||||||  ||||||||||    
T  9120319 agatttcttaggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 7027054 - 7027122
Alignment:
Q  181 aagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 249  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7027054 aagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 7027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 26601423 - 26601270
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||| |||| |||||||| |||||||||||  ||||||||||||  ||||||||| |||||| || |||| ||       |||  |||||||||    
T  26601423 aagttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattc 26601324  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 154  Q
    |||||||||||||||||||| | |||||||||||||  |||||||  |||||||    
T  26601323 aaaatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20605139 - 20605206
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  20605139 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  87 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 143  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 3574971 - 3575049
Alignment:
Q  158 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 236  Q
    ||||||||||||||||||| || || ||||| | |||| | ||||| ||||||||||||||||||||||| ||||||||    
T  3574971 ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12407325 - 12407390
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||| | |||||||| ||||    
T  12407325 aagtcttgtggtattcaatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaaga 12407390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7026549 - 7026616
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  7026549 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 7026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26788729 - 26788796
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  26788729 aagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 26788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13833687 - 13833609
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcattt 79  Q
    |||| ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||||| |||||||    
T  13833687 aagtattgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttttatcattt 13833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24776300 - 24776365
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| ||||| | |||| |||||||||||| | |||||||| ||||    
T  24776300 aagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 24776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 215490 - 215423
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  215490 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 215423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28844500 - 28844567
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  28844500 aagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 28844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16269636 - 16269701
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  16269636 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 16269701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20605097 - 20605162
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  20605097 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 20605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20605181 - 20605246
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  20605181 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 20605246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22552028 - 22551963
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||||| |||   |||| |||||||||||| | |||||||| ||||    
T  22552028 aagtcttgtggtattcaatcaagattttttccaatttaaaaaaagtcttgtgttattcaatcaaga 22551963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14198841 - 14198782
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||||||||||||||||||| ||||| | | ||||||||||||||| | ||||||||    
T  14198841 aagtcttgtggtattcaatcaagactctttct-aatttaaaaaagtcttgtgttattcaat 14198782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32125195 - 32125255
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 61  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | ||||||||    
T  32125195 aagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaat 32125255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 19145013 - 19145082
Alignment:
Q  4 tcttgtggtattcaatcaag---attctttgtcattttaaaaaagtcttgaggtattcaattaagacttt 70  Q
    ||||||||||||||||||||   | ||||| |||||| ||||||| |||| |||||||||| ||||||||    
T  19145013 tcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagacttt 19145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28740548 - 28740481
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||| | | ||||  | || |||||||||||| |||||||||| ||||||    
T  28740548 aagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 28740481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33135568 - 33135635
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||| |||||||||||||||| | ||||  |||| |||||||| ||| |||||||||| ||||||    
T  33135568 aagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagact 33135635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 5093309 - 5093247
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 5093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43078620 - 43078654
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcat 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  43078620 aagtcttgtggtattcaatcaagattttttgtcat 43078654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1789387 - 1789452
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||| | |||||   |||| |||||||||||| | |||||||| ||||    
T  1789387 aagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 1789452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 7026738 - 7026775
Alignment:
Q  158 ggattttgtagtgtaatttcaagaagaaaaagtctttc 195  Q
    ||||||||||||||||||| || |||||||||||||||    
T  7026738 ggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8172165 - 8172210
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagt 46  Q
    ||||||||||||||| |||||||| ||||||||| || ||||||||    
T  8172165 aagtcttgtggtatttaatcaagactctttgtcacttcaaaaaagt 8172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31170889 - 31170824
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||| ||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  31170889 aagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 31170824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35317007 - 35317072
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||| ||||    
T  35317007 aagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 35317072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44765720 - 44765785
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||| | |||||   |||| |||||||||||| | |||||||| ||||    
T  44765720 aagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 44765785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  35 ttttaaaaaagtcttgaggtattcaattaagactttt 71  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 39838 - 39593
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||| |||| ||||||||| ||       ||| ||||||||||    
T  39838 aagttttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattc 39739  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  39738 aaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 39639  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  39638 aagataagatttcttgagattgtttttcttttaaaagttactatct 39593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13868 - 14103
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  13868 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 13967  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||          |||||||||||||  |||| || ||||||||||||||||||||    
T  13968 aaaatcattcaaatttcaaaagattgtttaataaattggattttgat----------ggattttgtagtgggattttaataagaaaaagtctttcatgaa 14057  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14058 aagatgagatttcttgagattgtttttcttttaaaagttactatct 14103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 146; Significance: 6e-77; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21459 - 21224
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| ||       ||||||||||||||    
T  21459 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 21360  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||          |||||||||||||  |||| || ||||||||||||||||||||    
T  21359 aaaatcattcaaatttcaaaagattgtttaataaattggattttgat----------ggattttgtagtgggattttaataagaaaaagtctttcatgaa 21270  T
Q  201 aagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  21269 aagatgagatttcttgagattgtttttcttttaaaagttactatct 21224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 28463 - 28573
Alignment:
Q  127 tttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 226  Q
    ||||||||||||||||||||||||||||          ||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttg---------gtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 28553  T
Q  227 tattttaaaagttactatct 246  Q
    | ||||||||||||||||||    
T  28554 tcttttaaaagttactatct 28573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 849 - 1091
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnn-gtcttgtggtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||| ||        |||||||||||||    
T  849 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtatt 948  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    |||||||||||||||||||||| ||| |||||||||| | ||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||| |    
T  949 caaaatcattcaaatttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcatta 1047  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    ||| ||||||||||||||||||||||   ||||||||||||||||||    
T  1048 aaatatgagatttcttgagattgttt---ttttaaaagttactatct 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 810 - 874
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    ||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  810 tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 58297 - 58052
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagactttt-catcatttnnnnnnngtcttgtggtatt 99  Q
    |||||||||||||||||||||||| | |||| ||  |||||||||||||| |||||||| | ||||||||| ||||| ||       ||  |||||||||    
T  58297 aagtcttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtatt 58199  T
Q  100 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatga 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||| ||| ||||||||||    
T  58198 caaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatga 58099  T
Q  200 aaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  58098 aaagatgagatttcttgagattgtttttcttttaaaagttactatct 58052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15254 - 15028
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||| || |||| ||       |||| |||||||||    
T  15254 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 15155  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  15154 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15055  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||| |||||||  ||||||||||    
T  15054 aacatgaaatttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 15293 - 15231
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  15293 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 15231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15897 - 15671
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||| || |||| ||       |||| |||||||||    
T  15897 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 15798  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||    
T  15797 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15698  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||| |||||||  ||||||||||    
T  15697 aacatgaaatttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 15936 - 15874
Alignment:
Q  4 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    ||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  15936 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 15874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 4186 - 4337
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||    
T  4186 aagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 4285  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 152  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4286 aaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4144 - 4211
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagact 68  Q
    |||||||||||||||||||||||| | ||||  | || |||||||||||| |||||||||| ||||||    
T  4144 aagtcttgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagact 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 100197 - 100411
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||| || |||| ||       |||| |||||||||    
T  100197 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 100296  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    ||||||||||||||||| ||||||||||||||||||   ||||||||||||||| |||| |||| ||||| ||||| || ||||||||||||||||||||    
T  100297 aaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaa 100396  T
Q  201 aagatgagatttctt 215  Q
    || ||||||||||||    
T  100397 aacatgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 37089 - 36905
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    ||||||||||| | |||||||| |||||| ||  ||||||       |||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattgg 36990  T
Q  140 attttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 224  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  36989 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37086 - 37027
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37086 aagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 39116 - 38890
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||| |||||    
T  39116 aagtcttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattc 39017  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | ||||||||||||||||||    
T  39016 aaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaa 38917  T
Q  201 aagatgagatttcttgagattgttttt 227  Q
    || |||||||| |||  ||||||||||    
T  38916 aacatgagattccttaggattgttttt 38890  T

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Target: scaffold0004 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 102079 - 102307
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaag--tcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtat 98  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||  ||||| |||||||||| |||||| || |||| ||       |||| |||||||    
T  102079 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 102178  T
Q  99 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg 198  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||     
T  102179 tcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcata 102278  T
Q  199 aaaagatgagatttcttgagattgttttt 227  Q
    |||| ||||||||||||  ||||||||||    
T  102279 aaaatatgagatttcttatgattgttttt 102307  T

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Target: scaffold0839 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 3798 - 3668
Alignment:
Q  116 tcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttctt 215  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  216 gagattgtttttattttaaaagttactatct 246  Q
    |||||||||||| ||||||||||||||||||    
T  3698 gagattgtttttcttttaaaagttactatct 3668  T

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Target: scaffold0151 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  40 aaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 139  Q
    ||||||||||| |||||||||| |||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||| |  |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcag 38688  T
Q  140 attttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 227  Q
    ||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38687 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

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Target: scaffold0151; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38783 - 38724
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 60  Q
    |||||||||||||||||||||||| ||||  ||| || |||||||||| | |||||||||    
T  38783 aagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 38724  T

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Target: scaffold0276 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 760 - 529
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttcatcatttnnnnnnngtcttgtggtattc 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||| || ||| || |||| ||        | | |||||||||    
T  760 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattc 661  T
Q  101 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaa 200  Q
    |||||||||||||||| |||||||||||||||||||   ||||||||||||||| ||| ||||| ||||| |||||    | |||||||||||| | |||    
T  660 aaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaa 561  T
Q  201 aagatgagatttcttgagattgtttttatttt 232  Q
    || ||||||||||||  |||| ||||| ||||    
T  560 aacatgagatttcttaggattttttttttttt 529  T

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Target: scaffold0276; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 802 - 737
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaaga 66  Q
    |||||||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  802 aagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaaga 737  T

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Target: scaffold0347 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 14892 - 14991
Alignment:
Q  147 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 246  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

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Target: scaffold0010 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 233723 - 233795
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttca 73  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| || ||||||||    
T  233723 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

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Target: scaffold0010; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 234571 - 234643
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttca 73  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| || ||||||||    
T  234571 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

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Target: scaffold0010; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 222555 - 222627
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaattaagacttttca 73  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| |||| |||||| || ||||||||    
T  222555 aagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 199905 - 199980
Alignment:
Q  95 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtg 170  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| |||||||| |||||| || |||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

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Target: scaffold0651 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8748 - 8793
Alignment:
Q  1 aagtcttgtggtattcaatcaagattctttgtcattttaaaaaagt 46  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||||    
T  8748 aagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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