View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8877_high_6 (Length: 271)
Name: NF8877_high_6
Description: NF8877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8877_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 26450520 - 26450276
Alignment:
| Q |
15 |
aaaccaacacaatccatatcaacaagaagatcaacaacatcaccaacaccatgtttttccataatcaatttcttcacccaaccacacataatagcaacca |
114 |
Q |
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| T |
26450520 |
aaaccaacacaatccatatcaacaagaagatcaacaacatcaccaacaccatgtttttccataatcaatttcttcacccaaccacacataatagcaacca |
26450421 |
T |
|
| Q |
115 |
ttaactccatagtttccttatcaaccctgttctctttccttaaccaatcaaaaacctctaaagcacaccatgaatctcttccatcttgagagaaataaac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
26450420 |
ttaactccatagtttccttatcaaccctgttctctttccttaaccaatcaaaaacctccaaagcacaccatgaatctcttccatcttgagagaaataaac |
26450321 |
T |
|
| Q |
215 |
caacacaagctgaagttctttagccgaaagacggtcattcatctc |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26450320 |
caacacaagctgaagttctttagccgaaagacggtcattcatctc |
26450276 |
T |
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