View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8881_low_14 (Length: 268)

Name: NF8881_low_14
Description: NF8881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8881_low_14
NF8881_low_14
[»] chr6 (29 HSPs)
chr6 (1-113)||(2830331-2830443)
chr6 (1-111)||(11572167-11572277)
chr6 (1-110)||(8382991-8383100)
chr6 (1-109)||(6330115-6330223)
chr6 (1-109)||(26602323-26602431)
chr6 (1-111)||(8099528-8099638)
chr6 (1-110)||(13853615-13853724)
chr6 (1-110)||(33052816-33052925)
chr6 (1-111)||(35031023-35031133)
chr6 (1-109)||(9644696-9644804)
chr6 (1-109)||(9650713-9650821)
chr6 (1-110)||(6143553-6143662)
chr6 (1-110)||(6068565-6068674)
chr6 (1-94)||(8417815-8417908)
chr6 (1-93)||(28747156-28747248)
chr6 (17-109)||(13043758-13043850)
chr6 (1-79)||(17992018-17992096)
chr6 (1-109)||(22896471-22896570)
chr6 (13-101)||(6068974-6069062)
chr6 (13-104)||(14936491-14936582)
chr6 (3-94)||(7597001-7597092)
chr6 (17-90)||(6549902-6549974)
chr6 (13-53)||(3788093-3788133)
chr6 (53-112)||(3788111-3788170)
chr6 (63-114)||(6330199-6330250)
chr6 (63-112)||(11572142-11572191)
chr6 (1-46)||(33393168-33393213)
chr6 (2-58)||(8026119-8026175)
chr6 (63-111)||(13853591-13853639)
[»] chr7 (24 HSPs)
chr7 (1-112)||(38063935-38064046)
chr7 (1-110)||(1565751-1565860)
chr7 (1-110)||(1738469-1738578)
chr7 (1-110)||(7240748-7240857)
chr7 (1-110)||(46840859-46840968)
chr7 (1-109)||(31319421-31319529)
chr7 (1-111)||(7482223-7482333)
chr7 (1-110)||(9268755-9268864)
chr7 (1-109)||(23314161-23314269)
chr7 (1-109)||(36583395-36583503)
chr7 (1-110)||(22285698-22285807)
chr7 (1-109)||(94340-94448)
chr7 (1-109)||(36016218-36016326)
chr7 (1-109)||(38441460-38441568)
chr7 (1-110)||(28536773-28536882)
chr7 (1-110)||(4790247-4790356)
chr7 (1-93)||(33418392-33418484)
chr7 (13-110)||(9575408-9575505)
chr7 (1-103)||(40840141-40840243)
chr7 (1-109)||(7269427-7269535)
chr7 (63-109)||(31319399-31319445)
chr7 (9-38)||(7661147-7661176)
chr7 (63-112)||(9268840-9268889)
chr7 (63-111)||(1565727-1565775)
[»] chr3 (43 HSPs)
chr3 (1-112)||(19557074-19557185)
chr3 (1-112)||(49823403-49823514)
chr3 (1-110)||(22721930-22722039)
chr3 (1-110)||(44785418-44785527)
chr3 (1-109)||(10297979-10298087)
chr3 (1-110)||(4238593-4238702)
chr3 (1-110)||(8817408-8817517)
chr3 (1-110)||(34080052-34080161)
chr3 (1-110)||(38964391-38964500)
chr3 (1-109)||(17653712-17653820)
chr3 (1-109)||(37508921-37509029)
chr3 (1-109)||(48340397-48340505)
chr3 (1-110)||(2787854-2787963)
chr3 (1-110)||(8437424-8437533)
chr3 (1-110)||(9111516-9111625)
chr3 (1-110)||(21295348-21295457)
chr3 (1-110)||(40691018-40691127)
chr3 (1-110)||(42507377-42507486)
chr3 (1-109)||(51406673-51406781)
chr3 (1-111)||(36095702-36095812)
chr3 (1-111)||(46208028-46208138)
chr3 (1-110)||(42170368-42170477)
chr3 (1-93)||(6013358-6013450)
chr3 (4-109)||(35513473-35513578)
chr3 (1-95)||(33942954-33943048)
chr3 (13-102)||(8092595-8092684)
chr3 (2-110)||(9213515-9213623)
chr3 (26-92)||(8951943-8952009)
chr3 (9-94)||(29285790-29285873)
chr3 (13-110)||(26019514-26019610)
chr3 (63-111)||(37509005-37509053)
chr3 (63-111)||(46208114-46208162)
chr3 (63-110)||(4238678-4238725)
chr3 (63-110)||(17653796-17653843)
chr3 (24-95)||(43323074-43323145)
chr3 (9-110)||(5323205-5323307)
chr3 (63-109)||(21295326-21295372)
chr3 (54-112)||(33128203-33128261)
chr3 (63-109)||(44785396-44785442)
chr3 (9-109)||(2131702-2131802)
chr3 (13-73)||(21917688-21917748)
chr3 (84-112)||(29457963-29457991)
chr3 (63-111)||(49823379-49823427)
[»] chr1 (37 HSPs)
chr1 (1-112)||(9981644-9981755)
chr1 (1-110)||(27159380-27159489)
chr1 (1-110)||(44668115-44668224)
chr1 (1-109)||(31842817-31842925)
chr1 (1-109)||(39401988-39402096)
chr1 (1-109)||(47216721-47216829)
chr1 (1-111)||(34042694-34042804)
chr1 (1-110)||(11795932-11796041)
chr1 (1-110)||(14984836-14984945)
chr1 (1-110)||(26471087-26471196)
chr1 (1-109)||(23278023-23278131)
chr1 (119-256)||(47772342-47772479)
chr1 (1-109)||(1050888-1050996)
chr1 (1-109)||(44955228-44955336)
chr1 (1-109)||(47777503-47777611)
chr1 (1-110)||(12483650-12483759)
chr1 (1-110)||(47588359-47588468)
chr1 (1-95)||(25694333-25694427)
chr1 (1-112)||(17556749-17556861)
chr1 (6-103)||(47969700-47969798)
chr1 (1-110)||(11897053-11897162)
chr1 (5-111)||(16448134-16448240)
chr1 (10-113)||(12213505-12213608)
chr1 (1-109)||(37552141-37552249)
chr1 (4-94)||(11989796-11989886)
chr1 (55-111)||(37552217-37552273)
chr1 (13-60)||(1598415-1598461)
chr1 (63-110)||(11897138-11897185)
chr1 (63-110)||(34042780-34042827)
chr1 (15-73)||(571544-571601)
chr1 (17-86)||(11774536-11774605)
chr1 (53-110)||(12483627-12483684)
chr1 (63-112)||(25694403-25694452)
chr1 (15-95)||(12043618-12043697)
chr1 (1-95)||(12047120-12047215)
chr1 (63-103)||(44955212-44955252)
chr1 (63-111)||(47216697-47216745)
[»] chr2 (33 HSPs)
chr2 (1-111)||(3055556-3055666)
chr2 (1-111)||(15896840-15896950)
chr2 (1-110)||(37990035-37990144)
chr2 (1-110)||(41478661-41478770)
chr2 (1-110)||(44397546-44397655)
chr2 (1-110)||(44398685-44398794)
chr2 (1-109)||(13197732-13197840)
chr2 (1-110)||(13344483-13344592)
chr2 (1-109)||(12337959-12338067)
chr2 (1-112)||(16243805-16243916)
chr2 (1-110)||(38917544-38917653)
chr2 (1-109)||(6648541-6648649)
chr2 (1-109)||(16044339-16044447)
chr2 (1-109)||(37666632-37666740)
chr2 (1-112)||(4683954-4684065)
chr2 (1-110)||(9047777-9047886)
chr2 (1-110)||(15372225-15372334)
chr2 (2-112)||(30099205-30099315)
chr2 (1-95)||(41492918-41493012)
chr2 (1-109)||(12170421-12170529)
chr2 (1-81)||(44804600-44804680)
chr2 (17-90)||(16734802-16734875)
chr2 (19-78)||(41453090-41453149)
chr2 (29-95)||(31150667-31150733)
chr2 (10-110)||(30852648-30852748)
chr2 (14-95)||(36688896-36688977)
chr2 (63-110)||(41492895-41492942)
chr2 (28-94)||(4553059-4553125)
chr2 (63-113)||(44398770-44398820)
chr2 (9-110)||(10069237-10069338)
chr2 (8-60)||(11582661-11582713)
chr2 (63-111)||(13344568-13344616)
chr2 (63-111)||(38917520-38917568)
[»] chr8 (35 HSPs)
chr8 (1-110)||(54634-54743)
chr8 (1-110)||(2890184-2890293)
chr8 (1-110)||(7785800-7785909)
chr8 (1-109)||(6552655-6552763)
chr8 (1-109)||(39571225-39571333)
chr8 (1-111)||(43199376-43199486)
chr8 (1-110)||(7805721-7805830)
chr8 (1-110)||(33289283-33289392)
chr8 (1-109)||(3304300-3304408)
chr8 (1-109)||(12343162-12343270)
chr8 (1-109)||(15888374-15888482)
chr8 (1-109)||(44498209-44498317)
chr8 (1-112)||(25601022-25601133)
chr8 (1-111)||(13578855-13578965)
chr8 (1-110)||(12763676-12763785)
chr8 (4-109)||(31654613-31654718)
chr8 (1-110)||(32211385-32211494)
chr8 (1-109)||(7012171-7012279)
chr8 (1-109)||(32114497-32114605)
chr8 (1-109)||(8587170-8587278)
chr8 (47-110)||(4245649-4245712)
chr8 (4-106)||(28463614-28463716)
chr8 (4-95)||(24692004-24692094)
chr8 (1-111)||(27422191-27422298)
chr8 (1-104)||(17006916-17007019)
chr8 (1-104)||(17570228-17570331)
chr8 (55-112)||(25600997-25601054)
chr8 (13-110)||(33057593-33057690)
chr8 (52-95)||(13246808-13246851)
chr8 (55-110)||(27422266-27422321)
chr8 (14-100)||(28999083-28999169)
chr8 (63-112)||(2890159-2890208)
chr8 (1-46)||(35564712-35564757)
chr8 (63-111)||(54610-54658)
chr8 (65-109)||(11809114-11809158)
[»] chr4 (40 HSPs)
chr4 (1-110)||(47833610-47833719)
chr4 (1-109)||(6121915-6122023)
chr4 (1-109)||(46797725-46797833)
chr4 (1-110)||(3372120-3372229)
chr4 (1-110)||(3992975-3993084)
chr4 (1-110)||(48336262-48336371)
chr4 (1-109)||(20538708-20538816)
chr4 (1-109)||(24704370-24704478)
chr4 (1-109)||(53337370-53337478)
chr4 (1-112)||(7579307-7579418)
chr4 (1-111)||(33621794-33621904)
chr4 (1-110)||(42797731-42797840)
chr4 (1-109)||(5986876-5986984)
chr4 (1-112)||(33551198-33551309)
chr4 (1-111)||(3904705-3904815)
chr4 (1-111)||(47838639-47838749)
chr4 (1-110)||(43900548-43900657)
chr4 (1-110)||(51894604-51894713)
chr4 (4-109)||(52756675-52756780)
chr4 (1-112)||(26231574-26231685)
chr4 (1-112)||(40913211-40913322)
chr4 (1-110)||(41469788-41469897)
chr4 (1-95)||(3422075-3422168)
chr4 (1-95)||(41615698-41615792)
chr4 (1-103)||(17344219-17344321)
chr4 (10-112)||(25855080-25855182)
chr4 (9-94)||(50430448-50430533)
chr4 (15-91)||(29845663-29845739)
chr4 (13-94)||(31013036-31013117)
chr4 (55-109)||(4780371-4780425)
chr4 (37-103)||(17236845-17236912)
chr4 (63-109)||(7579394-7579440)
chr4 (9-98)||(9876650-9876739)
chr4 (63-109)||(42797816-42797862)
chr4 (63-104)||(40913194-40913235)
chr4 (1-90)||(41594673-41594762)
chr4 (1-50)||(45478151-45478200)
chr4 (19-95)||(6924724-6924799)
chr4 (52-104)||(21636196-21636248)
chr4 (55-111)||(24704446-24704502)
[»] chr5 (31 HSPs)
chr5 (1-109)||(9395350-9395458)
chr5 (4-110)||(37148980-37149086)
chr5 (1-110)||(23359941-23360050)
chr5 (1-110)||(36563560-36563669)
chr5 (1-110)||(41989429-41989538)
chr5 (1-109)||(11795168-11795276)
chr5 (4-110)||(582988-583094)
chr5 (1-110)||(13033050-13033159)
chr5 (1-110)||(13103023-13103132)
chr5 (1-110)||(17025623-17025732)
chr5 (1-110)||(20848073-20848181)
chr5 (1-110)||(37641952-37642062)
chr5 (1-110)||(4443959-4444068)
chr5 (4-109)||(26350375-26350480)
chr5 (1-88)||(6126845-6126932)
chr5 (1-85)||(21575970-21576054)
chr5 (31-110)||(38361743-38361822)
chr5 (21-102)||(13539909-13539986)
chr5 (1-60)||(2366360-2366419)
chr5 (17-99)||(3549585-3549667)
chr5 (15-109)||(39290775-39290868)
chr5 (9-110)||(2629574-2629675)
chr5 (1-100)||(966157-966256)
chr5 (14-60)||(35904448-35904492)
chr5 (13-94)||(36595808-36595886)
chr5 (8-46)||(9006911-9006949)
chr5 (63-109)||(23360026-23360072)
chr5 (55-104)||(966224-966273)
chr5 (63-112)||(21576030-21576079)
chr5 (63-111)||(17025708-17025756)
chr5 (13-73)||(39030587-39030647)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-110)||(1334-1443)
[»] scaffold0482 (1 HSPs)
scaffold0482 (1-110)||(12859-12968)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-110)||(23784-23893)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-110)||(49504-49613)
scaffold0009 (53-109)||(49579-49635)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-109)||(6153-6261)
[»] scaffold0650 (1 HSPs)
scaffold0650 (14-112)||(20-117)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-109)||(231327-231433)
[»] scaffold0415 (1 HSPs)
scaffold0415 (15-91)||(13761-13838)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-94)||(30042-30122)
[»] scaffold0171 (1 HSPs)
scaffold0171 (13-104)||(12387-12478)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-73)||(312754-312826)


Alignment Details
Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2830443 - 2830331
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  2830443 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 2830344  T
Q  101 gaggtagtatatc 113  Q
    |||||||||||||    
T  2830343 gaggtagtatatc 2830331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11572167 - 11572277
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  11572167 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 11572266  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  11572267 gaggtagtata 11572277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8382991 - 8383100
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  8382991 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 8383090  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  8383091 gaggtagtat 8383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6330223 - 6330115
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  6330223 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 6330124  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  6330123 gaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26602431 - 26602323
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26602431 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 26602332  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  26602331 gaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8099638 - 8099528
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  8099638 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 8099539  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  8099538 gaggtagtata 8099528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13853615 - 13853724
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  13853615 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 13853714  T
Q  101 gaggtagtat 110  Q
     |||||||||    
T  13853715 aaggtagtat 13853724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33052816 - 33052925
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  33052816 aagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 33052915  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  33052916 gaggtagtat 33052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35031023 - 35031133
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  35031023 aagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccg 35031122  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  35031123 gaggtagtata 35031133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9644804 - 9644696
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  9644804 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccg 9644705  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  9644704 gaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9650821 - 9650713
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  9650821 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccg 9650722  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  9650721 gaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6143662 - 6143553
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  6143662 aagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcg 6143563  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  6143562 gaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6068674 - 6068565
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||||||||||| ||||    
T  6068674 aagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccg 6068575  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  6068574 gaggtagtat 6068565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8417815 - 8417908
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  8417815 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaata 8417908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28747156 - 28747248
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaat 93  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747156 aagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  17 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17992096 - 17992018
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaa 79  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  17992096 aagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22896570 - 22896471
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||| ||||||||||||||| ||||    
T  22896570 aagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccg 22896480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 6068974 - 6069062
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccgg 101  Q
    |||||||||||| ||| ||||| ||||||||||| || ||||||||||| ||||||||||| |||||| ||| |||||||||| |||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 14936491 - 14936582
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggagg 104  Q
    |||||||||||| |||||||||||||||| ||||   |||||||||||  ||| ||||||| | |||| |||||||||||||| ||| ||||    
T  14936491 ggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 7597001 - 7597092
Alignment:
Q  3 gagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    ||||| |||| ||||| |||||||||||||| |||||||||||||||| |  ||||||  ||||||||| |   || |||||||||||||||    
T  7597001 gagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttataaata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 6549974 - 6549902
Alignment:
Q  17 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttata 90  Q
    ||||||||||||||||||||||  ||| ||   || ||||||||| ||||||||||| ||||||||||||||||    
T  6549974 aacaaaagttgatgtatctagtccaaattttcatc-aaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 3788133 - 3788093
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtcca 53  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  3788133 ggtcaacaaaagttgatgtatttagttaacaattcagtcca 3788093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 3788111 - 3788170
Alignment:
Q  53 aaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||||  ||||||||||| |||||||| |||||||||||  |||||||| |||||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtatat 3788170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 6330199 - 6330250
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatatcg 114  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| |||||||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagtatatcg 6330250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 11572191 - 11572142
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| |||||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagtatat 11572142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33393168 - 33393213
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 46  Q
    ||||||| |||| ||||| |||||||||||||||||||| ||||||    
T  33393168 aagagaaatttgagtcaataaaagttgatgtatctagtttaaaatt 33393213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 8026119 - 8026175
Alignment:
Q  2 agagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac 58  Q
    |||||| ||| |||||||||||||||||| |||  | ||||||||||||||| ||||    
T  8026119 agagaaatttaggtcaacaaaagttgatgcatccggataaaaattcagtccagatac 8026175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 13853639 - 13853591
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagtata 13853591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 38063935 - 38064046
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  38063935 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 38064034  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  38064035 gaggtagtatat 38064046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1565751 - 1565860
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1565751 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 1565850  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  1565851 gaggtagtat 1565860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1738469 - 1738578
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1738469 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 1738568  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  1738569 gaggtagtat 1738578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7240857 - 7240748
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7240857 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 7240758  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  7240757 gaggtagtat 7240748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46840968 - 46840859
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  46840968 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 46840869  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  46840868 gaggtagtat 46840859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31319421 - 31319529
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  31319421 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 31319520  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  31319521 gaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7482333 - 7482223
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7482333 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccg 7482234  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  7482233 gaggtagtata 7482223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9268864 - 9268755
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||     
T  9268864 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacca 9268765  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  9268764 gaggtagtat 9268755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23314161 - 23314269
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23314161 aagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 23314260  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  23314261 gaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36583503 - 36583395
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  36583503 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 36583404  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  36583403 gaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22285807 - 22285698
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22285807 aagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 22285708  T
Q  101 gaggtagtat 110  Q
    |||| |||||    
T  22285707 gagggagtat 22285698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 94340 - 94448
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  94340 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 94439  T
Q  101 gaggtagta 109  Q
    ||| |||||    
T  94440 gagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36016218 - 36016326
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  36016218 aagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 36016317  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  36016318 gagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38441568 - 38441460
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  38441568 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccg 38441469  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  38441468 gaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28536773 - 28536882
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  28536773 aagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 28536872  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  28536873 gaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4790356 - 4790247
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||| ||||    
T  4790356 aagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccg 4790257  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  4790256 gaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33418484 - 33418392
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaat 93  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  33418484 aagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 9575505 - 9575408
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||| | || ||||||||| |||||| ||| |||| |||||    
T  9575505 ggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtat 9575408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40840141 - 40840243
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| |||  |||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||| |  ||| |||||||| ||||||| ||||    
T  40840141 aagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccg 40840240  T
Q  101 gag 103  Q
    |||    
T  40840241 gag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7269427 - 7269535
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||  |||||| |||||||||||||| |||| ||||||||||||||  | ||||||  | ||||||||| | || ||| |||||||||||  ||||    
T  7269427 aagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccg 7269526  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  7269527 gagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 31319445 - 31319399
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 7661176 - 7661147
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagt 38  Q
    ||||||||||||||||||||||||||||||    
T  7661176 tttgggtcaacaaaagttgatgtatctagt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 9268840 - 9268889
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| |||||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagtatat 9268889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 1565775 - 1565727
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| |||||||||||||||||||| ||| ||||||    
T  1565775 acttttgttgacccaaaattctcttataaatagaaccgaagggagtata 1565727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19557074 - 19557185
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19557074 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 19557173  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  19557174 gaggtagtatat 19557185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 49823403 - 49823514
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  49823403 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 49823502  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  49823503 gaggtagtatat 49823514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22722039 - 22721930
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22722039 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 22721940  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  22721939 gaggtagtat 22721930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44785418 - 44785527
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44785418 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 44785517  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  44785518 gaggtagtat 44785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 10298087 - 10297979
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  10298087 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 10297988  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  10297987 gaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4238702 - 4238593
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4238702 aagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 4238603  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  4238602 gaggtagtat 4238593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8817408 - 8817517
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  8817408 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 8817507  T
Q  101 gaggtagtat 110  Q
     |||||||||    
T  8817508 aaggtagtat 8817517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34080052 - 34080161
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  34080052 aagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 34080151  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  34080152 gaggtagtat 34080161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38964500 - 38964391
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  38964500 aagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccg 38964401  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  38964400 gaggtagtat 38964391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17653820 - 17653712
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17653820 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 17653721  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  17653720 gagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37509029 - 37508921
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  37509029 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 37508930  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  37508929 gagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48340505 - 48340397
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  48340505 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccg 48340406  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  48340405 gaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2787854 - 2787963
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  2787854 aagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 2787953  T
Q  101 gaggtagtat 110  Q
    ||| ||||||    
T  2787954 gagatagtat 2787963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8437533 - 8437424
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  8437533 aagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccg 8437434  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  8437433 gaggtagtat 8437424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9111516 - 9111625
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  9111516 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccg 9111615  T
Q  101 gaggtagtat 110  Q
     |||||||||    
T  9111616 aaggtagtat 9111625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21295348 - 21295457
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  21295348 aagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 21295447  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  21295448 gaggtagtat 21295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40691018 - 40691127
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  40691018 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccg 40691117  T
Q  101 gaggtagtat 110  Q
    ||| ||||||    
T  40691118 gagttagtat 40691127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42507377 - 42507486
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  42507377 aagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccg 42507476  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  42507477 gaggtagtat 42507486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 51406781 - 51406673
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  51406781 aagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccg 51406682  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  51406681 gaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36095702 - 36095812
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  36095702 aagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccg 36095801  T
Q  101 gaggtagtata 111  Q
    |||| ||||||    
T  36095802 gagggagtata 36095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46208138 - 46208028
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  46208138 aagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 46208039  T
Q  101 gaggtagtata 111  Q
    |||| ||||||    
T  46208038 gagggagtata 46208028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42170368 - 42170477
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  42170368 aagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccg 42170467  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  42170468 gaggtagtat 42170477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6013358 - 6013450
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaat 93  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6013358 aagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 6013450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 35513578 - 35513473
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||    
T  35513578 agaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaag 35513479  T
Q  104 gtagta 109  Q
    | ||||    
T  35513478 ggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33942954 - 33943048
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||    
T  33942954 aagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaatag 33943048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 8092684 - 8092595
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccgga 102  Q
    |||||||| |||||||||||||| |||||||||| |||| | ||||||  ||||| |||||   || |||||||||||||||| ||||||    
T  8092684 ggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 9213623 - 9213515
Alignment:
Q  2 agagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccgg 101  Q
    |||||| ||| ||||||||||| ||||||||| | |||| ||| | |||||| ||||||  |||||||||||   |||| ||| |||||||||| |||||    
T  9213623 agagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccgg 9213524  T
Q  102 aggtagtat 110  Q
    ||| |||||    
T  9213523 agggagtat 9213515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 8951943 - 8952009
Alignment:
Q  26 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaa 92  Q
    |||||||| | ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 29285790 - 29285873
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    ||||| |||||||||||| |||||| ||||| |||||| ||  || |||  |||||||||||||| |||||||| |||||||||||    
T  29285790 tttggatcaacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 26019514 - 26019610
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||| |||||| |||||||| ||| |||||| |||| | ||||||| ||||| ||| | | || ||||||||||||||||||| ||||| |||||    
T  26019514 ggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaacttt-gttaacccaactttctcttataaatagaactggaggaagtat 26019610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 37509005 - 37509053
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtata 37509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 46208114 - 46208162
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| ||||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtata 46208162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 17653796 - 17653843
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 17653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 43323145 - 43323074
Alignment:
Q  24 gttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||| | |||||||||| | |||||||||||  ||||||||||| | || ||| ||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatag 43323074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 5323307 - 5323205
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagtt-aaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtag 107  Q
    ||||||||||||||||||||||||| | ||| ||||||||| | ||||||||||   |||||||||   || ||||| || ||||||| ||||| || ||    
T  5323307 tttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactcaattttcttttgtaaataggaccggggggag 5323208  T
Q  108 tat 110  Q
    |||    
T  5323207 tat 5323205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 33128261 - 33128203
Alignment:
Q  54 aatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    |||||||| ||||||||||| ||||||||||||||||| ||| || ||||  |||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggagagagtatat 33128203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 44785442 - 44785396
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 2131702 - 2131802
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagt 108  Q
    ||||||||||||||||||  |||| || ||  |||||| || ||| ||||||  ||||||||||| | |||| ||||| |||| ||| |||||||| |||    
T  2131702 tttgggtcaacaaaagttactgtacctggtgcaaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagt 2131801  T
Q  109 a 109  Q
    |    
T  2131802 a 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 21917688 - 21917748
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 73  Q
    ||||||||||| || || ||||||||| ||||||||||||| || ||| | ||||||||||    
T  21917688 ggtcaacaaaaattaatatatctagttcaaaattcagtccacatgcatcctcttttgttga 21917748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 29457963 - 29457991
Alignment:
Q  84 tcttataaatagaaccggaggtagtatat 112  Q
    |||||||||||||||||||||||||||||    
T  29457963 tcttataaatagaaccggaggtagtatat 29457991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 49823427 - 49823379
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagtata 49823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9981755 - 9981644
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  9981755 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 9981656  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  9981655 gaggtagtatat 9981644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27159380 - 27159489
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  27159380 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 27159479  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  27159480 gaggtagtat 27159489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44668115 - 44668224
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44668115 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 44668214  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  44668215 gaggtagtat 44668224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31842817 - 31842925
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  31842817 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 31842916  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  31842917 gaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39401988 - 39402096
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  39401988 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 39402087  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  39402088 gaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 47216721 - 47216829
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  47216721 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 47216820  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  47216821 gaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34042804 - 34042694
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  34042804 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccg 34042705  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  34042704 gaggtagtata 34042694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11796041 - 11795932
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  11796041 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccg 11795942  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  11795941 gaggtagtat 11795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14984945 - 14984836
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  14984945 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 14984846  T
Q  101 gaggtagtat 110  Q
    ||| ||||||    
T  14984845 gagatagtat 14984836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26471087 - 26471196
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26471087 aagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 26471186  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  26471187 gaggtagtat 26471196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23278023 - 23278131
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  23278023 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccg 23278122  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  23278123 gaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 47772342 - 47772479
Alignment:
Q  119 attaaaaaccattgaaactactcccatctacatccatccaccctttggattggaattgtgaacatttctccatataataatacttttcttttgaa----a 214  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    |    
T  47772342 attaaaaaccattgaaactactcccatctacatc----caccctttggatcggaatcgtgaacatttctccatataataatacttttcttttgaaagtga 47772437  T
Q  215 tatattgaagagatcaaagctgtccttcttcccacgagaata 256  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  47772438 tatattgaagagatcaaagctgtccttctttccacgagaata 47772479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1050996 - 1050888
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  1050996 aagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccg 1050897  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  1050896 gaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44955228 - 44955336
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  44955228 aagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccg 44955327  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  44955328 gaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 47777503 - 47777611
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  47777503 aagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 47777602  T
Q  101 gaggtagta 109  Q
    | |||||||    
T  47777603 ggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12483650 - 12483759
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  12483650 aagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccg 12483749  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  12483750 gaggtagtat 12483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47588359 - 47588468
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||     
T  47588359 aagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagacca 47588458  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  47588459 gaggtagtat 47588468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25694427 - 25694333
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  25694427 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaatag 25694333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 17556861 - 17556749
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaataca-ttcacttttgttgaactaaatttctcttataaatagaacc 99  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| |||||||||||||||| |||    
T  17556861 aagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggacc 17556762  T
Q  100 ggaggtagtatat 112  Q
     |||| |||||||    
T  17556761 agagggagtatat 17556749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 47969798 - 47969700
Alignment:
Q  6 aattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctc-ttataaatagaaccggag 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||| |||||||    
T  47969798 aattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11897162 - 11897053
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||| || ||||||  ||||||||||| |||| |||||||||||||||| ||||    
T  11897162 aagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccg 11897063  T
Q  101 gaggtagtat 110  Q
    |||| |||||    
T  11897062 gagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 16448134 - 16448240
Alignment:
Q  5 gaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggagg 104  Q
    |||| ||||||||||||||||| |||||||| ||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||||||| ||||||||    
T  16448134 gaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagg 16448233  T
Q  105 tagtata 111  Q
     ||||||    
T  16448234 gagtata 16448240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 12213505 - 12213608
Alignment:
Q  10 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    |||||||||||||| ||||| ||| |||||||||||||| || ||||||||| | ||||||||| ||||  ||||||||||||||  || ||||| ||||    
T  12213505 ttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T
Q  110 tatc 113  Q
    ||||    
T  12213605 tatc 12213608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37552249 - 37552141
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| ||||||||||||||| |  |||||||| ||||||||||||||||| ||||||  ||| |||||||   || ||| |||||||||||| ||||    
T  37552249 aagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccg 37552150  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  37552149 gagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 11989886 - 11989796
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    |||| |||| ||||| |||| ||||||||| | ||||||||||||||||||||| |||   ||||||||| | || |||||||||||||||    
T  11989886 agaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 37552217 - 37552273
Alignment:
Q  55 atacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||| ||||||||| | ||||||||||||||||||| ||||| || ||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtata 37552273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 1598415 - 1598461
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 60  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  1598415 ggtcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 11897138 - 11897185
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| | ||||||||||||||||||| |||||||| |||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtat 11897185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 34042780 - 34042827
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtat 34042827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 571601 - 571544
Alignment:
Q  15 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 73  Q
    |||||||||||| ||||| |||||| ||||||||||| ||||||| | |||||||||||    
T  571601 tcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttga 571544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  17 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctct 86  Q
    |||||||||||| |||||||||| ||||||||||  || |||||  | ||||||||| |||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 12483684 - 12483627
Alignment:
Q  53 aaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||  ||||||||||| | ||| ||||||||||||||| |||||||| |||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 12483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 25694403 - 25694452
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| |||||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagtatat 25694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 12043697 - 12043618
Alignment:
Q  15 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    ||||||||| || |||||||| |||||||||| | || ||||||||  |||||||||||  ||||| ||| ||||||||||    
T  12043697 tcaacaaaaattaatgtatcttgttaaaaattgaatc-aaatacatcaacttttgttgacttaaatatcttttataaatag 12043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12047215 - 12047120
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaa-ttcagtccaaatacattcacttttgttgaact-aaatttctcttataaatag 95  Q
    ||||||| ||||| |||| |||  |||||||||| ||||||||| ||||||| ||||||| ||||||||  | |||| || ||||||||||||||||    
T  12047215 aagagaaatttggatcaataaagattgatgtatccagttaaaaaattcagtctaaataca-tcactttttgttaactcaactttctcttataaatag 12047120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    ||||||||||| ||||| ||||||||||||||| |||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 47216745 - 47216697
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagtata 47216697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 3055666 - 3055556
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3055666 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 3055567  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  3055566 gaggtagtata 3055556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 15896950 - 15896840
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  15896950 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 15896851  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  15896850 gaggtagtata 15896840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37990035 - 37990144
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  37990035 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 37990134  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  37990135 gaggtagtat 37990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41478661 - 41478770
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  41478661 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 41478760  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  41478761 gaggtagtat 41478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44397655 - 44397546
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44397655 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 44397556  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  44397555 gaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44398794 - 44398685
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44398794 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 44398695  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  44398694 gaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13197732 - 13197840
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  13197732 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 13197831  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  13197832 gaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13344592 - 13344483
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  13344592 aagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccg 13344493  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  13344492 gaggtagtat 13344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12337959 - 12338067
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  12337959 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccg 12338058  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  12338059 gaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16243805 - 16243916
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  16243805 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccg 16243904  T
Q  101 gaggtagtatat 112  Q
    ||| ||||||||    
T  16243905 gagatagtatat 16243916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38917544 - 38917653
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||    
T  38917544 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccg 38917643  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  38917644 gaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6648541 - 6648649
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  6648541 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccg 6648640  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  6648641 gaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16044339 - 16044447
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  16044339 aagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccg 16044438  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  16044439 gaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 37666632 - 37666740
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  37666632 aagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccg 37666731  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  37666732 gaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4683954 - 4684065
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4683954 aagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 4684053  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  4684054 gaggtagtatat 4684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9047777 - 9047886
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||    
T  9047777 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccg 9047876  T
Q  101 gaggtagtat 110  Q
    ||| ||||||    
T  9047877 gagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15372334 - 15372225
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |    
T  15372334 aagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactg 15372235  T
Q  101 gaggtagtat 110  Q
    |||| |||||    
T  15372234 gagggagtat 15372225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 30099205 - 30099315
Alignment:
Q  2 agagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccgg 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| | |||    
T  30099205 agagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcgg 30099304  T
Q  102 aggtagtatat 112  Q
    |||||| ||||    
T  30099305 aggtagaatat 30099315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41492918 - 41493012
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  41492918 aagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaatag 41493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12170421 - 12170529
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| |||| |||||||| ||||||| | ||    
T  12170421 aagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcg 12170520  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  12170521 gagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44804600 - 44804680
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatt 81  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||    
T  44804600 aagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 16734875 - 16734802
Alignment:
Q  17 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttata 90  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||  ||||||||||| | || |||||||||||    
T  16734875 aacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  19 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaa 78  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||| |||| ||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 31150733 - 31150667
Alignment:
Q  29 tgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||||||||||| |||||||||||||  |||||||||||   || ||||||||||||||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaatag 31150667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 30852648 - 30852748
Alignment:
Q  10 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||| ||||||||||| ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||| |||||||| ||||    
T  30852648 ttgggacaacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T
Q  110 t 110  Q
    |    
T  30852748 t 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 36688977 - 36688896
Alignment:
Q  14 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||| ||||||||||| ||| ||||||||| | | ||||||  || |||||||| | || ||||||||||||||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaatag 36688896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 41492942 - 41492895
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| | ||||||||||||||||||| |||||||| |||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtat 41492895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 4553059 - 4553125
Alignment:
Q  28 atgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    ||||||||  ||||||||||| |||||||||||  | ||||||||| | || |||||||||||||||    
T  4553059 atgtatcttattaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 44398770 - 44398820
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatatc 113  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagtatatc 44398820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 10069237 - 10069338
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagt 108  Q
    |||| ||||| ||||||| |||||||| |||||||| |  | | | ||||||| ||||||||||| |||||| | ||||| |||||| ||| |||| |||    
T  10069237 tttgagtcaataaaagtttatgtatctggttaaaaaattggactagatacattaacttttgttgacctaaatatttcttaaaaatagtaccagaggaagt 10069336  T
Q  109 at 110  Q
    ||    
T  10069337 at 10069338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 11582661 - 11582713
Alignment:
Q  8 ttttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 60  Q
    ||||| ||||||||||||||||| |||||||| ||||||  | ||||||||||    
T  11582661 ttttgagtcaacaaaagttgatgaatctagttcaaaatttggaccaaatacat 11582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 13344568 - 13344616
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagtata 13344616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 38917568 - 38917520
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagtata 38917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 54634 - 54743
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  54634 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 54733  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  54734 gaggtagtat 54743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2890184 - 2890293
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  2890184 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 2890283  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  2890284 gaggtagtat 2890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7785800 - 7785909
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7785800 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 7785899  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  7785900 gaggtagtat 7785909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6552763 - 6552655
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  6552763 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 6552664  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  6552663 gaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39571225 - 39571333
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  39571225 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccg 39571324  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  39571325 gaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43199376 - 43199486
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  43199376 aagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 43199475  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  43199476 gaggtagtata 43199486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7805721 - 7805830
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7805721 aagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 7805820  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  7805821 gaggtagtat 7805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33289283 - 33289392
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  33289283 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccg 33289382  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  33289383 gaggtagtat 33289392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3304300 - 3304408
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3304300 aagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 3304399  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  3304400 gaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12343162 - 12343270
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  12343162 aagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 12343261  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  12343262 gaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15888374 - 15888482
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  15888374 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 15888473  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  15888474 gaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44498209 - 44498317
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44498209 aagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 44498308  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  44498309 gaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25601022 - 25601133
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  25601022 aagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcg 25601121  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  25601122 gaggtagtatat 25601133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13578965 - 13578855
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  13578965 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactg 13578866  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  13578865 gaggtagtata 13578855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12763676 - 12763785
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  12763676 aagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccg 12763775  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  12763776 gaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 31654718 - 31654613
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  31654718 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 31654619  T
Q  104 gtagta 109  Q
    | ||||    
T  31654618 ggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32211385 - 32211494
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  32211385 aagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccg 32211484  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  32211485 gaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7012279 - 7012171
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  7012279 aagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccg 7012180  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  7012179 gaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32114497 - 32114605
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  32114497 aagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 32114596  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  32114597 gaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8587278 - 8587170
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||  ||| ||||| ||||||||||||||||||||||||||| |||| ||||||||  ||||||||||| | || |||||||||||||||| ||||    
T  8587278 aagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccg 8587179  T
Q  101 gaggtagta 109  Q
    |||| ||||    
T  8587178 gagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 4245649 - 4245712
Alignment:
Q  47 cagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 28463716 - 28463614
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    ||||| |||||||| | ||||||||| ||||| ||| ||||||||||||||||||||  ||||||||||| | || |||||||||||||||| |||||||    
T  28463716 agaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggag 28463617  T
Q  104 gta 106  Q
    |||    
T  28463616 gta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 24692004 - 24692094
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||| ||||||||||||||||||||| ||||| ||| |||||||||| || ||||||  ||||||||||| |||| ||| ||||||||||||    
T  24692004 agaaatttgggtcaacaaaagttgatatatctggtt-aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaatag 24692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 27422298 - 27422191
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| ||||||||||||||| |  |||||||| ||||||||||||||||||||||||  |   |||||||   || ||| |||||||||||| ||||    
T  27422298 aagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacatgaa---ttgttgactcaactttatcttataaataggaccg 27422202  T
Q  101 gaggtagtata 111  Q
    |||| ||||||    
T  27422201 gaggaagtata 27422191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17007019 - 17006916
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| |||  ||||| ||||||||||||||||  |||| ||||||||||| || |||  ||||||||||| | || |||||||||||||||| | ||    
T  17007019 aagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcg 17006920  T
Q  101 gagg 104  Q
    ||||    
T  17006919 gagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17570228 - 17570331
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| |||  ||||| ||||||||||||||||  |||| ||||||||||| || |||  ||||||||||| | || |||||||||||||||| | ||    
T  17570228 aagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcg 17570327  T
Q  101 gagg 104  Q
    ||||    
T  17570328 gagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 25601054 - 25600997
Alignment:
Q  55 atacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||| ||||||||||| | ||| ||||||||||||||| |||||||| |||||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 25600997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 33057690 - 33057593
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||||| ||||||||||| ||||||| |||| |||  |||||   | ||||||||| | || ||| |||||||||||| |||||||| |||||    
T  33057690 ggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtat 33057593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 13246851 - 13246808
Alignment:
Q  52 caaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||||| ||||||||| | |||||||||||||||||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaatag 13246808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 27422266 - 27422321
Alignment:
Q  55 atacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    ||||||||| ||||||||| | ||||||||||||||||||| |||| ||| |||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtat 27422321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 28999083 - 28999169
Alignment:
Q  14 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||| ||||||| | |||| ||||||||||||||||| | ||||||  | ||||||||| | || ||||| ||||||||| |||||    
T  28999083 gtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaataaaaccg 28999169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 2890208 - 2890159
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| |||||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagtatat 2890159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35564712 - 35564757
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 46  Q
    |||||| ||||| |||||||||| ||||||||||||||| ||||||    
T  35564712 aagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 54658 - 54610
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagtata 54610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 11809158 - 11809114
Alignment:
Q  65 ttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    |||| |||| |||||| ||||||||||||||||||||||| ||||    
T  11809158 ttttattgatctaaatatctcttataaatagaaccggaggaagta 11809114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47833719 - 47833610
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  47833719 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 47833620  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  47833619 gaggtagtat 47833610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6121915 - 6122023
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  6121915 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccg 6122014  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  6122015 gaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46797833 - 46797725
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46797833 aagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccg 46797734  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  46797733 gaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3372229 - 3372120
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3372229 aagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 3372130  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  3372129 gaggtagtat 3372120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3993084 - 3992975
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  3993084 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccg 3992985  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  3992984 gaggtagtat 3992975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48336371 - 48336262
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  48336371 aagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 48336272  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  48336271 gaggtagtat 48336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20538708 - 20538816
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  20538708 aagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 20538807  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  20538808 gaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24704478 - 24704370
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  24704478 aagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 24704379  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  24704378 gaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 53337478 - 53337370
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  53337478 aagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 53337379  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  53337378 gaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 7579418 - 7579307
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  7579418 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccg 7579319  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  7579318 gaggtagtatat 7579307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33621904 - 33621794
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33621904 aagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccg 33621805  T
Q  101 gaggtagtata 111  Q
     | ||||||||    
T  33621804 aaagtagtata 33621794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42797840 - 42797731
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  42797840 aagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccg 42797741  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  42797740 gaggtagtat 42797731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5986984 - 5986876
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||    
T  5986984 aagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcg 5986885  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  5986884 gaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33551309 - 33551198
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  33551309 aagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccg 33551210  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  33551209 gaggtagtatat 33551198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3904705 - 3904815
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  3904705 aagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccg 3904804  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  3904805 gaggtagtata 3904815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47838639 - 47838749
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | ||    
T  47838639 aagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcg 47838738  T
Q  101 gaggtagtata 111  Q
    |||||||||||    
T  47838739 gaggtagtata 47838749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43900657 - 43900548
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  43900657 aagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccg 43900558  T
Q  101 gaggtagtat 110  Q
    |||| |||||    
T  43900557 gagggagtat 43900548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51894604 - 51894713
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||    
T  51894604 aagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccg 51894703  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  51894704 gaggtagtat 51894713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 52756780 - 52756675
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  52756780 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggag 52756681  T
Q  104 gtagta 109  Q
     |||||    
T  52756680 atagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 26231685 - 26231574
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| |||  |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  26231685 aagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccg 26231586  T
Q  101 gaggtagtatat 112  Q
    ||||||||||||    
T  26231585 gaggtagtatat 26231574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 40913211 - 40913322
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  40913211 aagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccg 40913310  T
Q  101 gaggtagtatat 112  Q
    |||| |||||||    
T  40913311 gagggagtatat 40913322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41469788 - 41469897
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  41469788 aagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccg 41469887  T
Q  101 gaggtagtat 110  Q
     ||| |||||    
T  41469888 aaggaagtat 41469897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3422168 - 3422075
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  3422168 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatag 3422075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41615698 - 41615792
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||  |||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  41615698 aagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatag 41615792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17344321 - 17344219
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| ||||| ||||||||||||||||||||   ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||||||||    
T  17344321 aagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccg 17344222  T
Q  101 gag 103  Q
    |||    
T  17344221 gag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 25855182 - 25855080
Alignment:
Q  10 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||   || ||||||| |||||||| ||| |||| ||||    
T  25855182 ttgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T
Q  110 tat 112  Q
    |||    
T  25855082 tat 25855080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 50430448 - 50430533
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||||||  ||||||||||| | || || ||||||||||||    
T  50430448 tttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 29845739 - 29845663
Alignment:
Q  15 tcaacaaaagtt-gatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataa 91  Q
    |||||||||||| ||||||| |||||||||||||||| |||||| ||| | ||||||||| |||||||||||||||||    
T  29845739 tcaacaaaagtttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataa 29845663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 31013117 - 31013036
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    |||||||||||| |||||||||||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| |||||||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  55 atacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||| ||||||||||| | ||||||||||||||||||| |||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  37 gttaaaaattcagtccaaa-tacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    ||||||||||||||| ||| |||||  ||||||||||| | |||||| |||||||||||| |||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 7579394 - 7579440
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 9876739 - 9876650
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagttaaaaa-ttcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaac 98  Q
    ||||||||||||||| || |||||| | |||||||| || |||| | ||||||| | ||||||| |  |||||||||||||||||||||||    
T  9876739 tttgggtcaacaaaaatttatgtatttggttaaaaaattgagtc-agatacattaaattttgttaacgtaaatttctcttataaatagaac 9876650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggagg 104  Q
    ||||||||||| | ||||||||||||||||||| ||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 41594762 - 41594673
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttata 90  Q
    |||||||  ||||||||||  |||||||||||||| ||| ||||||  | ||| ||||||  ||||||||||| | || |||||||||||    
T  41594762 aagagaaagttgggtcaacttaagttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45478200 - 45478151
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagt 50  Q
    ||||||| | |||||||| |||||||||||||||  ||||||||||||||    
T  45478200 aagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagt 45478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 6924724 - 6924799
Alignment:
Q  19 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatag 95  Q
    |||||||||||| ||||  || |||||| || ||||||||||| ||||||||||| |||| ||| ||||||| ||||    
T  6924724 caaaagttgatgcatctgattcaaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatatag 6924799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 21636196 - 21636248
Alignment:
Q  52 caaatacattcacttttgttgaactaaatttctcttataaatagaaccggagg 104  Q
    |||||||||| | |||||||||   |||| |||||||||||||||||||||||    
T  21636196 caaatacattaatttttgttgattcaaatgtctcttataaatagaaccggagg 21636248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 24704446 - 24704502
Alignment:
Q  55 atacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||| ||||||||||| | ||| ||||||||||||||| | |||||| ||||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtata 24704502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9395458 - 9395350
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  9395458 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 9395359  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  9395358 gaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 37148980 - 37149086
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  37148980 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 37149079  T
Q  104 gtagtat 110  Q
    |||||||    
T  37149080 gtagtat 37149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23360050 - 23359941
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||     
T  23360050 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacca 23359951  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  23359950 gaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36563560 - 36563669
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  36563560 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcg 36563659  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  36563660 gaggtagtat 36563669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41989429 - 41989538
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  41989429 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccg 41989528  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  41989529 gaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11795276 - 11795168
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  11795276 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcg 11795177  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  11795176 gaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 583094 - 582988
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  583094 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggag 582995  T
Q  104 gtagtat 110  Q
    |||||||    
T  582994 gtagtat 582988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13033159 - 13033050
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  13033159 aagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 13033060  T
Q  101 gaggtagtat 110  Q
    |||| |||||    
T  13033059 gaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13103132 - 13103023
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  13103132 aagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 13103033  T
Q  101 gaggtagtat 110  Q
    |||| |||||    
T  13103032 gaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17025732 - 17025623
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||||| ||||    
T  17025732 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccg 17025633  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  17025632 gaggtagtat 17025623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 20848181 - 20848073
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  20848181 aagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccg 20848083  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  20848082 gaggtagtat 20848073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37642062 - 37641952
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcac-ttttgttgaactaaatttctcttataaatagaacc 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||| |||    
T  37642062 aagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggacc 37641963  T
Q  100 ggaggtagtat 110  Q
    |||||||||||    
T  37641962 ggaggtagtat 37641952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4444068 - 4443959
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4444068 aagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccg 4443969  T
Q  101 gaggtagtat 110  Q
     ||| |||||    
T  4443968 aaggaagtat 4443959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 26350375 - 26350480
Alignment:
Q  4 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggag 103  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||    
T  26350375 agaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggag 26350474  T
Q  104 gtagta 109  Q
    | ||||    
T  26350475 ggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6126932 - 6126845
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctctta 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126932 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21576054 - 21575970
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctc 85  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  21576054 aagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 38361743 - 38361822
Alignment:
Q  31 tatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtat 110  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| | |||||| |||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 13539909 - 13539986
Alignment:
Q  21 aaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccgga 102  Q
    |||||||||||||||||||||||||||||||    || ||| | ||||||||| ||||||||||||||||||||| ||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtc----taaatttatttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2366360 - 2366419
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 60  Q
    ||||||| ||||||||||||| |||| |||||| | ||||||| ||||||||||||||||    
T  2366360 aagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacat 2366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 3549585 - 3549667
Alignment:
Q  17 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaacc 99  Q
    |||||||||||||||||   |||||||||| || ||| ||||||| | |||||||||   |||| ||||||||||||||||||    
T  3549585 aacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatagaacc 3549667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 39290868 - 39290775
Alignment:
Q  15 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    |||||||||||| ||||||||| ||||||||| | |||||||||||  | ||||||||| || |  ||||||||| ||||| |||||||| ||||    
T  39290868 tcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 2629574 - 2629675
Alignment:
Q  9 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagt 108  Q
    |||| ||||| |||| ||||||||| |||||||||| | ||  || ||||||| ||||||||||| |||||| | ||||||||| |  |||||||| |||    
T  2629574 tttgagtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagt 2629673  T
Q  109 at 110  Q
    ||    
T  2629674 at 2629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 966256 - 966157
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||| ||||| ||||||||| |  |||||||| ||||||||||||||| | ||||||  ||| |||||||   || |||||||| ||||||| ||||    
T  966256 aagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttgattcaactttctcttgtaaataggaccg 966157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 35904492 - 35904448
Alignment:
Q  14 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 60  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||    
T  35904492 gtcaacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 36595808 - 36595886
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    ||||||||||| |||||||||||  |||||||||||||| | |||||||   ||||||||| | ||  ||||||||||||||    
T  36595808 ggtcaacaaaaattgatgtatctgattaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaata 36595886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 9006911 - 9006949
Alignment:
Q  8 ttttgggtcaacaaaagttgatgtatctagttaaaaatt 46  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  9006911 ttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||||| | ||| ||||||||||||||| |||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  55 atacattcacttttgttgaactaaatttctcttataaatagaaccggagg 104  Q
    ||||||||| ||||||||| | ||||||||||||||||||| || |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 21576030 - 21576079
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| |||||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagtatat 21576079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 17025708 - 17025756
Alignment:
Q  63 acttttgttgaactaaatttctcttataaatagaaccggaggtagtata 111  Q
    ||||||||||| | ||| ||||||||||||||| |||||||| ||||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagtata 17025756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 39030587 - 39030647
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 73  Q
    |||||||||||||| |||||| | ||||||||||    ||||||||||| |||||||||||    
T  39030587 ggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttga 39030647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1443 - 1334
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1443 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 1344  T
Q  101 gaggtagtat 110  Q
    || |||||||    
T  1343 gatgtagtat 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12968 - 12859
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  12968 aagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 12869  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  12868 gaggtagtat 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23893 - 23784
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23893 aagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 23794  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  23793 gaggtagtat 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49613 - 49504
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  49613 aagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 49514  T
Q  101 gaggtagtat 110  Q
    ||||||||||    
T  49513 gaggtagtat 49504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  53 aaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagta 109  Q
    ||||||||  ||||||||||| | ||| ||||||||||||||| |||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6153 - 6261
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  6153 aagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccg 6252  T
Q  101 gaggtagta 109  Q
    |||||||||    
T  6253 gaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 20 - 117
Alignment:
Q  14 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggaggtagtatat 112  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||  ||||||||||| | |  |||||| |||||||||||||||||| |||||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtatat 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 231327 - 231433
Alignment:
Q  3 gagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccgga 102  Q
    |||||| || ||||||||||||||||| || |||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||| | ||||    
T  231327 gagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcgga 231426  T
Q  103 ggtagta 109  Q
    || ||||    
T  231427 gggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 13761 - 13838
Alignment:
Q  15 tcaacaaaagtt--gatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataa 91  Q
    ||||||||||||  ||||||| |||||||||||||||| |||||| ||| | ||||||||| |||||||||||||||||    
T  13761 tcaacaaaagttttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataa 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 30042 - 30122
Alignment:
Q  14 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaata 94  Q
    ||||| ||||| |||||||||||||||| |||| || ||||||||||  ||||||||| |  ||||| ||| |||||||||    
T  30042 gtcaataaaagatgatgtatctagttaagaatttagaccaaatacatctacttttgtttatttaaatgtctattataaata 30122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 12387 - 12478
Alignment:
Q  13 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaactaaatttctcttataaatagaaccggagg 104  Q
    |||||||||||  |||||||||| ||||| |||| || ||||| |||   |||||| |||| | |||| |||||||||||||| ||||||||    
T  12387 ggtcaacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggagg 12478  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 312826 - 312754
Alignment:
Q  1 aagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 73  Q
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T  312826 aagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttga 312754  T

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