View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8882_low_3 (Length: 403)
Name: NF8882_low_3
Description: NF8882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8882_low_3 |
 | |
|
| [»] scaffold1330 (1 HSPs) |
| | |
|
| [»] scaffold0345 (1 HSPs) |
| | |
|
| [»] scaffold0105 (5 HSPs) |
| | |
|
| [»] scaffold0496 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 353; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 385
Target Start/End: Original strand, 7457899 - 7458283
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457899 |
agaaaaatgtgttcgggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
7457998 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7457999 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacctcccttgattgc |
7458098 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcct |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7458099 |
agttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccattggaagatttcct |
7458198 |
T |
|
| Q |
301 |
gagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttc |
385 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7458199 |
gagcaagccacctcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttc |
7458283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 1 - 385
Target Start/End: Original strand, 7411820 - 7412204
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7411820 |
agaaaaatgtgttggggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
7411919 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7411920 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacctcccttgattgc |
7412019 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcct |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7412020 |
agttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccattggaagatttcct |
7412119 |
T |
|
| Q |
301 |
gagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttc |
385 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7412120 |
gagcaagccacctcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttc |
7412204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 44919976 - 44920056
Alignment:
| Q |
22 |
tttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgat |
102 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||| |||||| ||| |||||||||| ||| || |||||||| || |||||| |
|
|
| T |
44919976 |
tttatggatgaaaaattttatgtccttggcggagttggagttgacaaaacaacacaactaacttgtggtgaagagtttgat |
44920056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 44920148 - 44920184
Alignment:
| Q |
185 |
cacctcctttgattgcagttgtaaaaaatgtattgta |
221 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
44920148 |
cacctcctttaattgcagttgtaaaagatgtattgta |
44920184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1330 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold1330
Description:
Target: scaffold1330; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 1550 - 1903
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
1550 |
agaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttg |
1649 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
1650 |
atatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgc |
1749 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttc |
298 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| |||| |
|
|
| T |
1750 |
agttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttc |
1847 |
T |
|
| Q |
299 |
ctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
1848 |
ccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
1903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0345
Description:
Target: scaffold0345; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 3828 - 3475
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
3828 |
agaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttg |
3729 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
3728 |
atatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgc |
3629 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttc |
298 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| |||| |
|
|
| T |
3628 |
agttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttc |
3531 |
T |
|
| Q |
299 |
ctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
3530 |
ccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
3475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105 (Bit Score: 162; Significance: 2e-86; HSPs: 5)
Name: scaffold0105
Description:
Target: scaffold0105; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 3941 - 3588
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
3941 |
agaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttg |
3842 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
3841 |
atatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgc |
3742 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttc |
298 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| |||| |
|
|
| T |
3741 |
agttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttc |
3644 |
T |
|
| Q |
299 |
ctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
3643 |
ccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
3588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 10023 - 9670
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
10023 |
agaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttg |
9924 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
9923 |
atatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgc |
9824 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttc |
298 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| |||| |
|
|
| T |
9823 |
agttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttc |
9726 |
T |
|
| Q |
299 |
ctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
9725 |
ccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
9670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 48751 - 49104
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
48751 |
agaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgaaaaaaaaacacagcttacatgtggggaggagtttg |
48850 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
48851 |
atatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgc |
48950 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttc |
298 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| |||| |
|
|
| T |
48951 |
agttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttc |
49048 |
T |
|
| Q |
299 |
ctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
49049 |
ccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
49104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 35151 - 35504
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
35151 |
agaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttg |
35250 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
|||| |||| |||| ||||| |||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
35251 |
atatgaagacaaaaaaatggtgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgc |
35350 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttc |
298 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| |||| |
|
|
| T |
35351 |
agttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttc |
35448 |
T |
|
| Q |
299 |
ctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
35449 |
ccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
35504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 190 - 354
Target Start/End: Complemental strand, 15899 - 15735
Alignment:
| Q |
190 |
cctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccat |
287 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||| |
|
|
| T |
15899 |
cctttgattgcggttgtaaaaaatgtattggatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcat |
15802 |
T |
|
| Q |
288 |
tggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
354 |
Q |
| |
|
|||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
15801 |
tggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
15735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0496 (Bit Score: 156; Significance: 9e-83; HSPs: 1)
Name: scaffold0496
Description:
Target: scaffold0496; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 2748 - 3123
Alignment:
| Q |
1 |
agaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttg |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| ||||||||||| || | |||||| |||| ||||| |||||||||||||||||| |||| |
|
|
| T |
2748 |
agaaaaatgtgttcaagtgtatttatggatggaaaattttacgtccttggtgggatagcagctgacaaaaaaacacaacttacatgtggtgaggagtttg |
2847 |
T |
|
| Q |
101 |
atataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgc |
200 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||| ||||||| | ||||||||| | ||| ||||||| |||| ||| ||||||| |||||||| |
|
|
| T |
2848 |
atataaagaataaaaaatggcgtgaaatacccaacatgctcccagtacgaactggagtgtctgagacaccaccttcttttgggtcacctcccttgattgc |
2947 |
T |
|
| Q |
201 |
agttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcct |
300 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| | || | | |||||||| |||||| ||||| |||| |||| |||||| | ||||||||| |||||| |
|
|
| T |
2948 |
agttgtaaaaaatgtattgtatgctgcagattatggaaaacaagaagtaaagaagtatgataaagacaacaactattgggtcatcattggaagctttcct |
3047 |
T |
|
| Q |
301 |
gagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtc |
376 |
Q |
| |
|
|||||||| || || |||| ||||||||| |||| ||||| |||||||||||| ||| | ||||| ||||||| |
|
|
| T |
3048 |
gagcaagctacatcggtgaatggttggggactagcatttcgatcatgtggagataaactattatttcttggaggtc |
3123 |
T |
|
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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 17356638 - 17356675
Alignment:
| Q |
7 |
atgtgttcgggtgtatttatggatggaaaattttatgt |
44 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
17356638 |
atgtgttctggtgtattcatggatggaaaattttatgt |
17356675 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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