View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8887_low_1 (Length: 392)

Name: NF8887_low_1
Description: NF8887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8887_low_1
NF8887_low_1
[»] chr8 (29 HSPs)
chr8 (19-162)||(7770741-7770884)
chr8 (19-162)||(7796651-7796794)
chr8 (19-162)||(7815932-7816075)
chr8 (19-162)||(24069289-24069432)
chr8 (19-162)||(39515329-39515468)
chr8 (26-152)||(34617048-34617174)
chr8 (19-99)||(13366956-13367036)
chr8 (19-106)||(44606269-44606356)
chr8 (45-107)||(21961979-21962041)
chr8 (47-107)||(13513578-13513638)
chr8 (47-107)||(13603111-13603171)
chr8 (19-66)||(36070308-36070355)
chr8 (19-113)||(40250175-40250268)
chr8 (19-136)||(14840765-14840882)
chr8 (19-99)||(2421199-2421279)
chr8 (19-99)||(19913622-19913702)
chr8 (19-99)||(21267262-21267342)
chr8 (19-99)||(38696441-38696521)
chr8 (19-91)||(45395100-45395171)
chr8 (47-94)||(6397943-6397990)
chr8 (24-107)||(37276141-37276224)
chr8 (45-99)||(117204-117257)
chr8 (19-136)||(22551139-22551256)
chr8 (19-99)||(8095476-8095556)
chr8 (19-107)||(9854774-9854862)
chr8 (47-107)||(21670222-21670282)
chr8 (19-99)||(27059115-27059195)
chr8 (19-59)||(37324634-37324674)
chr8 (19-99)||(45384370-45384449)
[»] chr4 (28 HSPs)
chr4 (19-162)||(26392970-26393113)
chr4 (19-158)||(3533455-3533594)
chr4 (19-162)||(56296323-56296466)
chr4 (19-148)||(56000417-56000546)
chr4 (19-146)||(29663772-29663899)
chr4 (19-99)||(2162742-2162822)
chr4 (19-99)||(13533165-13533244)
chr4 (19-106)||(6140259-6140346)
chr4 (41-108)||(38418914-38418981)
chr4 (26-99)||(43419282-43419354)
chr4 (19-94)||(34438536-34438610)
chr4 (25-108)||(38370419-38370502)
chr4 (17-63)||(14524348-14524394)
chr4 (24-86)||(50530638-50530700)
chr4 (19-100)||(1188976-1189057)
chr4 (29-136)||(1794556-1794663)
chr4 (28-99)||(4890992-4891063)
chr4 (37-108)||(5591342-5591413)
chr4 (19-94)||(11438476-11438551)
chr4 (19-66)||(44159215-44159262)
chr4 (37-108)||(48126957-48127028)
chr4 (19-61)||(44655851-44655893)
chr4 (19-84)||(10168700-10168765)
chr4 (19-144)||(37884136-37884261)
chr4 (45-118)||(41401608-41401681)
chr4 (45-94)||(44302876-44302925)
chr4 (19-100)||(44503581-44503662)
chr4 (19-99)||(6348287-6348367)
[»] chr3 (29 HSPs)
chr3 (19-163)||(43346289-43346433)
chr3 (19-162)||(48254732-48254875)
chr3 (19-142)||(21128055-21128178)
chr3 (29-149)||(21074133-21074253)
chr3 (19-107)||(17350000-17350088)
chr3 (19-107)||(39133147-39133235)
chr3 (29-144)||(53624221-53624335)
chr3 (26-94)||(5123255-5123322)
chr3 (19-99)||(12062290-12062370)
chr3 (45-107)||(8371376-8371438)
chr3 (33-111)||(20314655-20314733)
chr3 (24-90)||(20335386-20335452)
chr3 (45-119)||(53808474-53808547)
chr3 (14-107)||(11219556-11219648)
chr3 (19-96)||(52719797-52719873)
chr3 (19-111)||(20288115-20288207)
chr3 (31-119)||(20336540-20336628)
chr3 (19-75)||(31282465-31282521)
chr3 (19-119)||(45421239-45421339)
chr3 (19-91)||(48867344-48867416)
chr3 (29-144)||(35371051-35371166)
chr3 (24-66)||(20286687-20286729)
chr3 (19-141)||(24403372-24403494)
chr3 (28-82)||(46495636-46495690)
chr3 (19-92)||(18442381-18442454)
chr3 (19-92)||(19487455-19487528)
chr3 (45-94)||(32979244-32979293)
chr3 (47-107)||(7483423-7483483)
chr3 (19-75)||(55423526-55423582)
[»] chr5 (18 HSPs)
chr5 (19-163)||(15856663-15856807)
chr5 (173-239)||(8187256-8187323)
chr5 (19-66)||(12830877-12830924)
chr5 (19-66)||(12862857-12862904)
chr5 (19-99)||(20539249-20539329)
chr5 (21-99)||(22819424-22819501)
chr5 (19-99)||(2167421-2167501)
chr5 (29-81)||(22165123-22165175)
chr5 (19-107)||(40058148-40058236)
chr5 (19-66)||(5383072-5383119)
chr5 (19-94)||(10977155-10977229)
chr5 (29-108)||(11262536-11262615)
chr5 (19-66)||(19826004-19826051)
chr5 (45-107)||(7426797-7426859)
chr5 (45-107)||(21387793-21387855)
chr5 (47-136)||(22308665-22308754)
chr5 (19-99)||(32757958-32758039)
chr5 (19-99)||(41906305-41906384)
[»] chr7 (17 HSPs)
chr7 (19-158)||(45719745-45719884)
chr7 (19-104)||(35484212-35484296)
chr7 (19-99)||(9662141-9662220)
chr7 (26-119)||(8661961-8662054)
chr7 (19-106)||(8661813-8661900)
chr7 (24-106)||(33459442-33459524)
chr7 (19-99)||(44113559-44113638)
chr7 (19-99)||(46458619-46458699)
chr7 (19-149)||(28325202-28325333)
chr7 (24-66)||(10256258-10256300)
chr7 (19-65)||(18668893-18668939)
chr7 (45-107)||(35315135-35315197)
chr7 (19-107)||(4167581-4167669)
chr7 (19-111)||(11344637-11344729)
chr7 (19-107)||(14108969-14109057)
chr7 (19-107)||(14418926-14419014)
chr7 (47-99)||(24494957-24495009)
[»] chr1 (22 HSPs)
chr1 (19-149)||(51299413-51299543)
chr1 (27-96)||(51300166-51300235)
chr1 (30-99)||(7161226-7161295)
chr1 (19-66)||(8092728-8092775)
chr1 (18-87)||(34258627-34258696)
chr1 (41-106)||(40811404-40811469)
chr1 (19-66)||(21277124-21277171)
chr1 (19-66)||(51726783-51726830)
chr1 (19-65)||(29001062-29001108)
chr1 (19-99)||(9415754-9415833)
chr1 (19-107)||(23082024-23082112)
chr1 (19-87)||(30535585-30535652)
chr1 (19-66)||(14169749-14169796)
chr1 (45-108)||(14764385-14764448)
chr1 (19-66)||(16757460-16757507)
chr1 (19-94)||(19466117-19466191)
chr1 (19-94)||(36509941-36510015)
chr1 (19-106)||(46110414-46110501)
chr1 (24-107)||(50678498-50678580)
chr1 (19-109)||(22766716-22766806)
chr1 (45-107)||(30551487-30551549)
chr1 (19-104)||(9633905-9633990)
[»] chr2 (18 HSPs)
chr2 (19-104)||(15850561-15850645)
chr2 (19-99)||(28562713-28562793)
chr2 (19-105)||(14509339-14509425)
chr2 (19-99)||(4829595-4829675)
chr2 (19-107)||(25570768-25570856)
chr2 (19-107)||(35799642-35799730)
chr2 (19-94)||(9472757-9472831)
chr2 (19-105)||(2277366-2277452)
chr2 (19-99)||(10367369-10367449)
chr2 (19-99)||(12959611-12959691)
chr2 (51-153)||(34513402-34513504)
chr2 (19-112)||(7037096-7037189)
chr2 (14-107)||(12853012-12853104)
chr2 (19-99)||(34147269-34147350)
chr2 (47-107)||(4512264-4512324)
chr2 (19-107)||(14714622-14714710)
chr2 (47-99)||(34467667-34467719)
chr2 (19-99)||(37868946-37869026)
[»] chr6 (8 HSPs)
chr6 (19-99)||(293546-293626)
chr6 (19-66)||(14328713-14328760)
chr6 (19-66)||(14421723-14421770)
chr6 (26-82)||(7312963-7313019)
chr6 (19-63)||(15728863-15728907)
chr6 (19-99)||(2130913-2130993)
chr6 (31-99)||(7312187-7312254)
chr6 (19-99)||(12773200-12773280)
[»] scaffold0015 (1 HSPs)
scaffold0015 (45-107)||(207696-207758)
[»] scaffold0128 (1 HSPs)
scaffold0128 (29-94)||(22123-22188)
[»] scaffold0098 (1 HSPs)
scaffold0098 (19-107)||(41038-41126)
[»] scaffold0122 (1 HSPs)
scaffold0122 (19-99)||(16075-16155)
[»] scaffold2071 (1 HSPs)
scaffold2071 (47-110)||(573-636)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-64)||(151998-152045)
[»] scaffold0051 (1 HSPs)
scaffold0051 (45-107)||(39799-39861)
[»] scaffold0045 (1 HSPs)
scaffold0045 (24-113)||(77071-77160)
[»] scaffold1974 (1 HSPs)
scaffold1974 (18-123)||(511-615)
[»] scaffold1878 (1 HSPs)
scaffold1878 (18-123)||(659-763)
[»] scaffold0084 (1 HSPs)
scaffold0084 (19-107)||(13102-13190)


Alignment Details
Target: chr8 (Bit Score: 116; Significance: 7e-59; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 7770884 - 7770741
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  7770884 aaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgtt 7770785  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
    | ||||||||||||||||||||||||||||||||| ||||||||    
T  7770784 ggattgtgcatgtctattctatcttatagtgtaccatttattaa 7770741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 7796794 - 7796651
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  7796794 aaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgtt 7796695  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
    | ||||||||||||||||||||||||||||||||| ||||||||    
T  7796694 ggattgtgcatgtctattctatcttatagtgtaccatttattaa 7796651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 7816075 - 7815932
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  7816075 aaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgtt 7815976  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
    | ||||||||||||||||||||||||||||||||| ||||||||    
T  7815975 ggattgtgcatgtctattctatcttatagtgtaccatttattaa 7815932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 24069432 - 24069289
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||     
T  24069432 aaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgtc 24069333  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
      ||||||||||||||||||||||||||||||||| ||||||||    
T  24069332 cgattgtgcatgtctattctatcttatagtgtaccatttattaa 24069289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 39515329 - 39515468
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  39515329 aaatgtctaaggtggaccaacattataggtggtccatcatagaccttactaagttttataattttaaccatttgatattttagttaaaaagaggatcgtt 39515428  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
    | |||||||||||||||    | |||||||||||| ||||||||    
T  39515429 ggattgtgcatgtctat----tattatagtgtaccatttattaa 39515468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 34617174 - 34617048
Alignment:
Q  26 taaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgt 125  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||| ||| |    
T  34617174 taaggtggaccaacattacaggtggtccaccgtagaccttactaaattttttaattttaaccatttgatattttagttaaaaagaggatcgttggattct 34617075  T
Q  126 gcatgtctattctatcttatagtgtac 152  Q
    |||||||||||||||||||| ||||||    
T  34617074 gcatgtctattctatcttatcgtgtac 34617048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 13367036 - 13366956
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||| |||   || || |||||||| |||||||||||    
T  13367036 aaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttt 13366956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 44606269 - 44606356
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaa 106  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||  ||| | || || |||||||| |||||| |||| ||||||    
T  44606269 aaatgtctaaggtgaaccaactttataggtggtccaccatagaccttgttaaatcttttatttttaaccgtttgatcttttttttaaa 44606356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 21961979 - 21962041
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||||  ||||||||| |||| |||||||||||||||||| |||| |||||||    
T  21961979 aggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaaaa 21962041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 13513578 - 13513638
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||||||||| |||||| ||| |||| |||||||||||||||||| |||| |||||||    
T  13513578 gtggtccaccatataccttattaatttttttaattttaaccatttgattttttctttaaaa 13513638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 13603111 - 13603171
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||||||||| |||||| ||| |||| |||||||||||||||||| |||| |||||||    
T  13603111 gtggtccaccatataccttattaatttttttaattttaaccatttgattttttctttaaaa 13603171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 36070308 - 36070355
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  36070308 aaatgtctaaggtgaaccaactttataggtggtccaccatagacctta 36070355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 40250175 - 40250268
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaa 113  Q
    ||||||||||| || | |||||||||| ||||||||||||| |||||| |||  ||| ||||||||||| |||||| |||| |  ||||||||||    
T  40250175 aaatatctaagatgaatcaacattatatgtggtccaccatataccttattaaaattt-taattttaaccctttgatcttttttaaaaaaagagaa 40250268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 14840882 - 14840765
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||| ||||||||||||||| | ||| ||||||||||  |||| ||| |||| |||||| |||| |||||||| || | ||||||||  | | ||    
T  14840882 aaatgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgatatgttttctaaaaagatgaccatt 14840783  T
Q  119 gaattgtgcatgtctatt 136  Q
    ||||| ||| ||||||||    
T  14840782 gaattatgcgtgtctatt 14840765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 2421279 - 2421199
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| |||||| ||||||| ||||||||||| ||| | || || |||||||| |||||| ||||    
T  2421279 aaatgtctaaggtgaaccaactttatagatggtccatcatagaccttattaaatcttttatttttaaccgtttgatctttt 2421199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 19913622 - 19913702
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||| ||| ||| |   ||  ||||||||||||||||||||    
T  19913622 aaatttctaaggtgaaccaactttatagatggtccaccatagactttattaaatcacatgtttttaaccatttgatatttt 19913702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21267262 - 21267342
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||| | ||| ||||  |||||||||| |||||| ||||    
T  21267262 aaatatctaaggtggaccatgattcaaggtggtccaccatatacctaattaaatttttaaattttaaccttttgatttttt 21267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 38696441 - 38696521
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| |||| ||| ||||||| ||| | ||||||||||||||| || | ||| |||||||||||||||| |||||| ||||    
T  38696441 aaatgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttgatttttt 38696521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 45395100 - 45395171
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccattt 91  Q
    ||||||||| |||||||||| ||| ||||||||||| |||||||| || ||| ||||| ||||| ||||||||    
T  45395100 aaatatctatggtggaccaatattgtaggtggtccatcatagaccgtattaattttta-aatttaaaccattt 45395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 6397943 - 6397990
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||    
T  6397943 gtggtccaccatagaccttattaatttttttaatttaaaccatttgat 6397990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 37276224 - 37276141
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||||| ||||   ||| ||||||| ||| ||||||| || ||| |||| |||||||||||||||||| |||| |||||||    
T  37276224 tctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattttttaattttaaccatttgattttttctttaaaa 37276141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 117204 - 117257
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||    
T  117204 aggtggtccaccatagaccttactaaatttta-aattttagccttttgatttttt 117257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 22551139 - 22551256
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||| ||||||| ||| ||| | ||| ||||||||| |||||| ||| |||| |||||| |||| |||||| | || ||||||||||  |   ||    
T  22551139 aaatctctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttgatctgttttttaaaaagatgacaatt 22551238  T
Q  119 gaattgtgcatgtctatt 136  Q
    ||||| ||||||||||||    
T  22551239 gaattttgcatgtctatt 22551256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 8095476 - 8095556
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| ||||||||| | ||||||| |||||| ||| | || ||  |||||||||||||| ||||    
T  8095476 aaatgtctaaggtgaaccaactttataggtgatgcaccatataccttattaaatcttgtatctttaaccatttgatttttt 8095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 9854862 - 9854774
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| |||| ||||||||||| |||   ||||||||||||||| | || ||| | || |||||| ||||||||||| |||| |||||||    
T  9854862 aaatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaaccatttgattttttttttaaaa 9854774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 21670222 - 21670282
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||  ||||| ||| |||| |||||||||||||||| | |||| |||||||    
T  21670222 gtggtccaccatatgccttattaatttttttaattttaaccatttggttttttctttaaaa 21670282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 27059115 - 27059195
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||| |||||| |||||| ||| |||  |||||||||| ||||||| ||| ||| |||||||||||  |||||| ||||    
T  27059115 aaatatttaaggtagaccaatattgtagaaggtccaccatggaccttattaattttgataattttaactctttgatctttt 27059195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 37324674 - 37324634
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccata 59  Q
    |||| ||||||||| |||||| |||||||||||||||||||    
T  37324674 aaatgtctaaggtgaaccaactttataggtggtccaccata 37324634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 45384370 - 45384449
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||| | |||||||  |||||||| |||||||||| || ||| |||| ||||||||||  || ||||||||    
T  45384370 aaatatctaaggtgtaacaacattgcaggtggtctaccatagacc-tattaatttttttaattttaactgttcgatatttt 45384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 26393113 - 26392970
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  26393113 aaatgtctaaggtgaaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgtt 26393014  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
    | ||||||||||||||||||||||||||||||||| ||||||||    
T  26393013 ggattgtgcatgtctattctatcttatagtgtaccatttattaa 26392970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 3533594 - 3533455
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||    
T  3533594 aaatgtctaaggtcgaccaacattataggcggtccaccatagaccttactaagttttttaattttaaccatttgatattttgattaaaaagaggatcgtt 3533495  T
Q  119 gaattgtgcatgtctattctatcttatagtgtacccttta 158  Q
    | ||||||||||||||||||||||||| ||||||| ||||    
T  3533494 ggattgtgcatgtctattctatcttatggtgtaccattta 3533455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 56296323 - 56296466
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||    
T  56296323 aaatgtctaaggtggaccaacatcataggtggtctaccatagaccttactaagttttttaattttaaccatttgatattttagataaaaagaggatcgtt 56296422  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
      |||||||||||||||||||||||||| |||||| ||||||||    
T  56296423 agattgtgcatgtctattctatcttatactgtaccatttattaa 56296466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 56000417 - 56000546
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||    
T  56000417 aaatgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagttttttaattttaaccatttgatattttgattaaaaagaggatcgtt 56000516  T
Q  119 gaattgtgcatgtctattctatcttatagt 148  Q
    | |||||| |||||||||||||||||||||    
T  56000517 ggattgtgtatgtctattctatcttatagt 56000546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 29663772 - 29663899
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||| |||||||||| |||||     
T  29663772 aaatgtctaaggtgaaccaacattataggtggtccaccataaaccttactaagatttttaattttaaccacttgatattttagttaaaaagaggatcgtc 29663871  T
Q  119 gaattgtgcatgtctattctatcttata 146  Q
    | ||||| |||| |||||||||||||||    
T  29663872 ggattgtacatgcctattctatcttata 29663899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 2162742 - 2162822
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||||| ||| ||||  |||||||||  |||||| ||||    
T  2162742 aaatatgtaaggttgaccaacattttaggtggtccaccatagaccttattaattttttcaattttaacactttgatctttt 2162822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 13533244 - 13533165
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||||| ||| ||||  ||||||||||||||||| ||||    
T  13533244 aaatgtctatggtggaccaacattatagatagtccaccatagaccttattaa-tttttcaattttaaccatttgatctttt 13533165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 6140346 - 6140259
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaa 106  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||| ||| | || || |||||||  |||||| |||| ||||||    
T  6140346 aaatatctaaggtgaaccaactttataggtagtccaccatagaccttattaaatcttttatttttaacagtttgatcttttttttaaa 6140259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 38418981 - 38418914
Alignment:
Q  41 ttataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaa 108  Q
    |||||||||||||||||||  ||||||||| |||| | |||||||||||||||| |||| ||||||||    
T  38418981 ttataggtggtccaccatatgccttactaaatttttttattttaaccatttgattttttctttaaaaa 38418914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 43419354 - 43419282
Alignment:
Q  26 taaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    ||||||| |||||||||||||||||||||||||||| |||| | || ||| ||||||||||| |||||| ||||    
T  43419354 taaggtgaaccaacattataggtggtccaccatagatcttaat-agatttttaattttaaccctttgatctttt 43419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 34438536 - 34438610
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||| |||| ||||||| |||||||||| | ||||||||||||||||| ||| |||| |||||| |||||||||||    
T  34438536 aaatgtctatggtggactaacattatagatagtccaccatagaccttattaa-ttttttaatttcaaccatttgat 34438610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 38370419 - 38370502
Alignment:
Q  25 ctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaa 108  Q
    |||||||| |||||| || |||||||||||||||||| ||||  || |  | ||||||||||| ||||||||||| ||||||||    
T  38370419 ctaaggtgaaccaactttgtaggtggtccaccatagatcttataaattcatttaattttaaccctttgatattttttttaaaaa 38370502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 14524348 - 14524394
Alignment:
Q  17 caaaatatctaaggtggaccaacattataggtggtccaccatagacc 63  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  14524348 caaaatatctatggtggaccaacattatagatagtccaccatagacc 14524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 50530638 - 50530700
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaac 86  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||| |||| || |||||||    
T  50530638 tctaaggtgaaccaactttataggtagtccaccatagaccttattaaattttttatttttaac 50530700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 1188976 - 1189057
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttta 100  Q
    |||| |||| |||| ||||||||| ||||||||||||| ||||||||| ||| ||   |||||| ||||||||||| |||||    
T  1188976 aaatgtctatggtgaaccaacattgtaggtggtccaccgtagaccttaataatttgcttaatttaaaccatttgatttttta 1189057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 1794556 - 1794663
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgtgca 128  Q
    ||||||||||| |||   |||||||||||||||||||| ||| |||| |||||| |||| ||||||   || ||||||||||  | | ||||||| |||     
T  1794556 ggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatcaattttttaaaaagatgaccattgaattatgcg 1794655  T
Q  129 tgtctatt 136  Q
    ||||||||    
T  1794656 tgtctatt 1794663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 4890992 - 4891063
Alignment:
Q  28 aggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||| ||||||||||||||||||||||| |||||||| |||  ||| |||| | |||| |||| ||||||    
T  4890992 aggtgggccaacattataggtggtccaccaaagaccttagtaatatttttaatctcaaccgtttggtatttt 4891063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 5591413 - 5591342
Alignment:
Q  37 aacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaa 108  Q
    |||||||||| | ||||||||||||||||| ||| ||||  |||||||||| ||||| ||||| ||| ||||    
T  5591413 aacattatagatagtccaccatagaccttattaatttttccaattttaaccctttgacatttttttttaaaa 5591342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 11438551 - 11438476
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||| |||| |||||||||||| | |||||||||||||||| ||| || ||| || | |||||| |||||||||||    
T  11438551 aaatgtctacggtggaccaacagtgtaggtggtccaccataaaccctattaatttctttaatttaaaccatttgat 11438476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 44159215 - 44159262
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||||||||||||| | ||| |||||||||||||||||||||| ||||    
T  44159215 aaatatctaaggtgaaacaatattataggtggtccaccatagatctta 44159262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 48126957 - 48127028
Alignment:
Q  37 aacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaa 108  Q
    |||||||||| | ||||||||||||||||| ||| ||||  |||||||||| ||||| ||||| ||| ||||    
T  48126957 aacattatagatagtccaccatagaccttattaatttttccaattttaaccctttgacatttttttttaaaa 48127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 44655851 - 44655893
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccataga 61  Q
    |||||||||| ||||||||| |||||| |||||||||||||||    
T  44655851 aaatatctaaagtggaccaatattatatgtggtccaccataga 44655893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 10168765 - 10168700
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataatttta 84  Q
    |||| |||| |||||||||||||||||| ||||||||| || |||||| ||| || | ||||||||    
T  10168765 aaatgtctatggtggaccaacattatagatggtccaccgtacaccttattaatttatttaatttta 10168700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 37884261 - 37884136
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||||| || |||| ||||| ||||||  | ||||||||||||||||| ||| ||||  |||||||||| |||||| |||| || | |||||| |  |||    
T  37884261 aaatatatatggtgaaccaatattatatatagtccaccatagaccttattaaattttccaattttaaccctttgatctttttttaagaaagaggacggtt 37884162  T
Q  119 gaattgtgcatgtctattctatctta 144  Q
    | ||||  |||||||| | |||||||    
T  37884161 ggattgcacatgtctaatttatctta 37884136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 41401681 - 41401608
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    ||||||||||||||| ||||||  || |  | |||||||||||||| |||||||| || |||||||||| ||||    
T  41401681 aggtggtccaccataaaccttataaattcatttaattttaaccattcgatatttttttcaaaaagagaaccgtt 41401608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 44302876 - 44302925
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    ||||||| ||||||||||| || ||| |||| ||||||||||||||||||    
T  44302876 aggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 44302925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44503662 - 44503581
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttta 100  Q
    |||| |||| |||| ||||||||| ||| ||||||||| ||||||||| ||| ||   |||||| ||||||||||| |||||    
T  44503662 aaatgtctatggtgaaccaacattgtagatggtccaccgtagaccttaataatttgcttaatttaaaccatttgatttttta 44503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 6348287 - 6348367
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| |||| ||||||||||| |||   |||||||||| ||||||||| |||  ||| ||||||||||| |||||| ||||    
T  6348287 aaatgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttctaattttaaccctttgatctttt 6348367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 43346433 - 43346289
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||| || |||    
T  43346433 aaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaaccatttaatattttagttaaaaagaggattgtt 43346334  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaat 163  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||    
T  43346333 gaattgtgcatgtccattatatcttatagtgtaccatttattaat 43346289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 48254875 - 48254732
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||     
T  48254875 aaatgtctaaggtggaccaacattataggtggtccaccataaaccttactaagttttttaattttaaccacttgatattttagttaaaaagaggatcgtc 48254776  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaa 162  Q
    | |||||||||| |||||||||||||||||||||| ||||||||    
T  48254775 ggattgtgcatgcctattctatcttatagtgtaccatttattaa 48254732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 21128055 - 21128178
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||  || |||    
T  21128055 aaatgtctaaggtggaccaacattataggtggtccaccatagaccttacaaagttttttaattttaaccatttgatattttagttaaaaagatgattgtt 21128154  T
Q  119 gaattgtgcatgtctattctatct 142  Q
    |||||||||||||| ||| |||||    
T  21128155 gaattgtgcatgtccattatatct 21128178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 21074253 - 21074133
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgtgca 128  Q
    |||||||||||||||||| | ||||||||||||||||| ||| ||||  |||||||||| ||||||||||| || | |||||  | | ||||||   |||    
T  21074253 ggtggaccaacattatagatagtccaccatagaccttattaattttttcaattttaaccctttgatatttttttaagaaagatgaccattgaatcacgca 21074154  T
Q  129 tgtctattctatcttatagtg 149  Q
    |||||||| ||||||| ||||    
T  21074153 tgtctattttatcttacagtg 21074133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 17350088 - 17350000
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| |||||||||||||||  ||||||||| |||| |||||||||||||||||| |||| |||||||    
T  17350088 aaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaaaa 17350000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 39133147 - 39133235
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| |||||||||||||||  ||||||||| |||| |||||||||||||||||| |||| |||||||    
T  39133147 aaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaaaa 39133235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 53624335 - 53624221
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgtgca 128  Q
    |||||||||||||||||| | ||||||||||||||||| ||| ||||  |||||||||| |||||| |||| || | |||||||| ||||| |||   |     
T  53624335 ggtggaccaacattatagatagtccaccatagaccttattaa-tttttcaattttaaccttttgatctttttttaagaaagagaaccgttggattacacg 53624237  T
Q  129 tgtctattctatctta 144  Q
    |||||||| |||||||    
T  53624236 tgtctattttatctta 53624221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 5123322 - 5123255
Alignment:
Q  26 taaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||| |||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||||||||||    
T  5123322 taagatggaccaacattgtatgtggtctaccatagaccttattaa-ttttttaattttaaccatttgat 5123255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 12062370 - 12062290
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| ||||||||| ||||||||| |||||| ||| | || || ||||||||||||||| ||||    
T  12062370 aaatgtctaaggtgaaccaactttataggtgatccaccatataccttattaaatcttgtatttttaaccatttgatttttt 12062290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 8371376 - 8371438
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||| ||||||| ||| |||| ||||||||||| |||||| |||| |||||||    
T  8371376 aggtggtccaccatggaccttagtaaattttttaattttaaccctttgattttttctttaaaa 8371438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 20314733 - 20314655
Alignment:
Q  33 gaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagag 111  Q
    |||||||||||||| | ||||||||||||||||| ||| || | |||||| ||||||||||| | || ||| |||||||    
T  20314733 gaccaacattatagatagtccaccatagaccttattaatttatttaatttaaaccatttgatttattttttcaaaagag 20314655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 20335386 - 20335452
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatt 90  Q
    |||| |||||||||||||||||| | ||||||||||||||||| ||| || | |||||| |||||||    
T  20335386 tctatggtggaccaacattatagatagtccaccatagaccttattaatttatttaatttaaaccatt 20335452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 53808474 - 53808547
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttg 119  Q
    ||||||||||||||| |||||| ||| ||||  |||||||||| |||||| |||| ||| |||||||||||||||    
T  53808474 aggtggtccaccataaaccttattaaatttttaaattttaaccctttgattttttcttt-aaaagagaatcgttg 53808547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 11219556 - 11219648
Alignment:
Q  14 catcaaaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||||| ||||||||| ||||   ||| ||||||| ||||||||| | || ||| |||| |||||||||||||||||| |||| |||||||    
T  11219556 catcaaaat-tctaaggtgaaccatatttaaaggtggttcaccatagatcgtattaaattttttaattttaaccatttgattttttctttaaaa 11219648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 52719873 - 52719797
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatat 96  Q
    |||||||| | |||||||||||||||| ||||||||||||| |||| | | || ||| |||| |||||||||||||||    
T  52719873 aaatatcttatgtggaccaacattatatgtggtccaccataaacctca-ttagctttttaatcttaaccatttgatat 52719797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 20288207 - 20288115
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagag 111  Q
    |||| |||| |||||||||||||||||| |  |||||||||||||||| ||| || | |||||| ||||||||  | | || |||||||||||    
T  20288207 aaatgtctatggtggaccaacattatagatattccaccatagaccttattaatttatttaatttaaaccatttagtttattttttaaaaagag 20288115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 20336628 - 20336540
Alignment:
Q  31 tggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttg 119  Q
    |||||||||||||||| | ||||||||||||||||| ||| || | |||||| |||||||  || | || ||| ||||||||| |||||    
T  20336628 tggaccaacattatagatagtccaccatagaccttattaatttatttaatttaaaccattcaatttatttttttaaaagagaaccgttg 20336540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 31282521 - 31282465
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagtttt 75  Q
    |||||||| |||||||||||| || ||||||||||||| ||||||||| ||| ||||    
T  31282521 aaatatcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaattttt 31282465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 45421239 - 45421339
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||| || |||||||||| ||||||||||||||||||||||  ||  |||  ||||| ||||| ||||| |||| || ||| |||||| ||||    
T  45421239 aaatgtctaagatgaaccaacattagaggtggtccaccatagaccttataaatgttttcaatttaaaccacttgatctttttttgaaatagagaaccgtt 45421338  T
Q  119 g 119  Q
    |    
T  45421339 g 45421339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 48867416 - 48867344
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccattt 91  Q
    |||| ||||||||| |||||| || ||||||||| ||||||||| ||| |||  ||| |||||||||||||||    
T  48867416 aaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaaatttgtaattttaaccattt 48867344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 35371051 - 35371166
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgtgca 128  Q
    ||||||||||| |||   ||||||||||||||| | || ||| | || ||||||||||  |||||| |||| ||||||||||||| | ||| |||  |||    
T  35371051 ggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactttttgattttttttttaaaaagagaaccattggattaggca 35371150  T
Q  129 tgtctattctatctta 144  Q
     ||||||| |||||||    
T  35371151 agtctattttatctta 35371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 20286687 - 20286729
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| |||||||||||||||||| | |||||||||||||||||    
T  20286687 tctatggtggaccaacattatagatagtccaccatagacctta 20286729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 24403372 - 24403494
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||| |||| || |||||||||| | |||||||||| |||||| ||| ||||  |||||||||||||| || |||| || | |||||  ||||||    
T  24403372 aaatgtctatggtgaactaacattatagatagtccaccataaaccttattaattttttcaattttaaccatttaatctttttttaagaaagatgatcgtt 24403471  T
Q  119 gaattgtgcatgtctattctatc 141  Q
    | ||  |||| ||||||| ||||    
T  24403472 ggatcttgcaagtctattgtatc 24403494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 46495636 - 46495690
Alignment:
Q  28 aggtggaccaacattataggtggtccaccatagaccttactaagttttataattt 82  Q
    ||||| ||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  46495636 aggtgaaccaacattgtaggtggtccatcatagaccttattaatttttttaattt 46495690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 18442381 - 18442454
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttg 92  Q
    |||| |||| |||||||||||||||| | | ||||||||||||||||| ||| || |  |||||||||| ||||    
T  18442381 aaatgtctatggtggaccaacattatcgatagtccaccatagaccttattaacttcttcaattttaaccctttg 18442454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 19487455 - 19487528
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttg 92  Q
    |||| |||| |||||||||||||||| | | ||||||||||||||||| ||| || |  |||||||||| ||||    
T  19487455 aaatgtctatggtggaccaacattatcgatagtccaccatagaccttattaacttcttcaattttaaccctttg 19487528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 32979244 - 32979293
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    ||||||| ||||||||||| || ||| |||| ||||||||||||||||||    
T  32979244 aggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 32979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 7483483 - 7483423
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||  ||||| ||| |||| |||||||||||||||||| |||| |||||||    
T  7483483 gtggcccaccatatgccttattaatttttttaattttaaccatttgattttttctttaaaa 7483423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 55423526 - 55423582
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagtttt 75  Q
    |||| ||| |||||||||||| || ||||||||||||| ||||||||| ||| ||||    
T  55423526 aaatgtcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaattttt 55423582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 15856663 - 15856807
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||| || |||    
T  15856663 aaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaatcatttgatattttagttaaaaagaggattgtt 15856762  T
Q  119 gaattgtgcatgtctattctatcttatagtgtaccctttattaat 163  Q
    ||||||| ||||||  || |||||||||||||| | |||||||||    
T  15856763 gaattgtacatgtcctttatatcttatagtgtatcatttattaat 15856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 8187256 - 8187323
Alignment:
Q  173 tacttctct-aaaaactcataaattccaaattattttttcatatccaataggtgttttatttccagaa 239  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8187256 tacttctctcaaaaactcataaattccaaattattttttcatatccaataggtgttttatttccagaa 8187323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 12830924 - 12830877
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  12830924 aaatatcttaggtgaaccaacattataggtggtccaccatagacctta 12830877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 12862904 - 12862857
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  12862904 aaatatcttaggtgaaccaacattataggtggtccaccatagacctta 12862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 20539329 - 20539249
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||| ||||||||||||| ||| ||||||||| | ||||||||||| ||| |||| |||||| |||| |||||| ||||    
T  20539329 aaatatataaggtggaccaatattgtaggtggtctatcatagaccttattaatttttttaatttaaaccgtttgatctttt 20539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 22819501 - 22819424
Alignment:
Q  21 atatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||| |||||||| ||||||||||||| ||||| |||| | || ||| ||||||||||| |||||| ||||    
T  22819501 atatctaaggtgaaccaacatgataggtggtccactatagatcttaat-agatttttaattttaaccctttgatctttt 22819424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 2167501 - 2167421
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||||||| ||| | || || | |||||| |||||| ||||    
T  2167501 aaatgtctaaggtgaaccaactttatagatggtccaccatagaccttattaaatcttttattattaaccgtttgatttttt 2167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 22165123 - 22165175
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataatt 81  Q
    ||||||||||||||||||||||||||||| |||| | | ||| ||||||||||    
T  22165123 ggtggaccaacattataggtggtccaccaaagacgtcattaatttttataatt 22165175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 40058148 - 40058236
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| |||||| ||||| || ||||||||||||||||| ||| | || || |||||||  |||||| |||| |||||||    
T  40058148 aaatgtctaaggtgaaccaactttataagtagtccaccatagaccttattaaatcttttatttttaactgtttgatcttttttttaaaa 40058236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 5383072 - 5383119
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| | |||| ||||||||||||||||||||||||||    
T  5383072 aaatgtctaaggtgaatcaactttataggtggtccaccatagacctta 5383119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 10977155 - 10977229
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||| |||||| |||||||||||| || |||||| |||||||||| || ||| |||| |||||||| |||||||||    
T  10977155 aaatgtctaagatggaccaacattgtatgtggtctaccatagaccatattaa-ttttttaattttatccatttgat 10977229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 11262536 - 11262615
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaa 108  Q
    ||||||||||| |||   ||||||||||||||| | || ||| | ||||||||| ||||||||||| |||| ||||||||    
T  11262536 ggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgatcttttttttaaaaa 11262615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 19826004 - 19826051
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||||| |||||| ||||||||||||| ||| ||||||||||||||||    
T  19826004 aaatatataaggtagaccaacattatatgtgatccaccatagacctta 19826051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 7426797 - 7426859
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||||||||||| ||| ||||  ||||| |||| |||||| |||| |||||||    
T  7426797 aggtggtccaccatagaccttattaaatttttaaatttcaaccttttgattttttctttaaaa 7426859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 21387793 - 21387855
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||| |||||||| || || ||| |||| |||||||||||||||||| |||| |||||||    
T  21387793 aggtggttcaccataggccgtattaaattttttaattttaaccatttgattttttctttaaaa 21387855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 22308754 - 22308665
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgtgcatgtctatt 136  Q
    |||||||||||||||| ||| ||| |||| |||| | ||||||||||| | || ||||||||||  | | ||| ||| ||||||||||||    
T  22308754 gtggtccaccatagacattattaaattttttaatgtaaaccatttgatctgttttttaaaaagatgaccattggattatgcatgtctatt 22308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 32757958 - 32758039
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttat-aattttaaccatttgatatttt 99  Q
    |||| |||| |||||||||||||  ||| | ||||||||||||||||| ||| |||| | |||||||||| |||||| ||||    
T  32757958 aaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaatttttttcaattttaaccctttgatctttt 32758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 41906384 - 41906305
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||| |||| ||| ||||||| ||||||||  |||||| | || ||| ||||||||||| |||||| ||||    
T  41906384 aaatatctaaggtgaaccagcatcataggtgatccaccatgcacctta-ttagatttttaattttaaccctttgatctttt 41906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 6e-47; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 45719745 - 45719884
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||||    
T  45719745 aaatgtctaaggtggaccaacattataggtgctccaccataaaccttactaagttttttaattttaaccaattgatattttgattaaaaagaggatcgtt 45719844  T
Q  119 gaattgtgcatgtctattctatcttatagtgtacccttta 158  Q
    | ||||||||||||||||||||||||| ||||||| ||||    
T  45719845 ggattgtgcatgtctattctatcttatggtgtaccattta 45719884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 35484296 - 35484212
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttattta 104  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||| | || ||| ||||||||||| |||||| |||| ||||    
T  35484296 aaatgtctaaggtgaaccaacattataggtggtccaccatagatcttaat-agatttttaattttaaccctttgatcttttgttta 35484212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 9662220 - 9662141
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||||| ||| ||||  ||||||||||||||||| ||||    
T  9662220 aaatgtctatggtggaccaacattatagatagtccaccatagaccttattaa-tttttcaattttaaccatttgatctttt 9662141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 8661961 - 8662054
Alignment:
Q  26 taaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttg 119  Q
    ||||||||| ||| ||| |||||||||||||||| |||||| ||| |||| |||||| |||| | || | ||||||||||||||| || |||||    
T  8661961 taaggtggatcaaaattgtaggtggtccaccatataccttaataaattttttaatttaaaccttctgttcttttatttaaaaagaaaaccgttg 8662054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 8661813 - 8661900
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaa 106  Q
    |||| ||||||||| | ||| ||| |||||||||||||||| |||||| ||| |||| |||||| |||  |||||| |||||||||||    
T  8661813 aaatgtctaaggtgaatcaaaattgtaggtggtccaccatataccttaataaattttttaatttaaacattttgatcttttatttaaa 8661900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 33459524 - 33459442
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaa 106  Q
    ||||||||| |||||| || ||||||||| ||||| ||| ||| |||  ||| ||||||||||| ||||||||||| ||||||    
T  33459524 tctaaggtgaaccaactttgtaggtggtctaccatggactttattaaaatttgtaattttaaccgtttgatattttttttaaa 33459442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 44113559 - 44113638
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||| |||| ||| ||||||||||||||||  |||||| | || ||| ||||||||||| |||||| ||||    
T  44113559 aaatatctaaggtgaaccagcatcataggtggtccaccatgcacctta-ttagatttttaattttaaccctttgatctttt 44113638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 46458699 - 46458619
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| |||||||| ||||||||||||||||| ||| |   ||| |||||||| |||||| ||||    
T  46458699 aaatgtctaaggtgaaccaactttataggtagtccaccatagaccttattaaatcacatagttttaaccgtttgatctttt 46458619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 28325202 - 28325333
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttat-ttaaaaagagaatcgt 117  Q
    |||| |||||||||||||||| || ||||||||| ||||||||| ||| |||  |||  ||||| |||| |||||| |||| | || ||| ||| ||| |    
T  28325202 aaatgtctaaggtggaccaactttgtaggtggtctaccatagactttattaaaattttaaatttaaaccgtttgatcttttttatttaaaggaggatcat 28325301  T
Q  118 tgaattgtgcatgtctattctatcttatagtg 149  Q
    || |||| ||| ||||||| ||||||| ||||    
T  28325302 tggattgcgcaagtctattttatcttacagtg 28325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 10256258 - 10256300
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    ||||||||| |||||| |||||||| |||||||||||||||||    
T  10256258 tctaaggtgaaccaactttataggtagtccaccatagacctta 10256300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 18668893 - 18668939
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctt 65  Q
    |||||||||| || |||||| |||||| |||||||||||||||||||    
T  18668893 aaatatctaaagtagaccaatattatatgtggtccaccatagacctt 18668939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 35315197 - 35315135
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||||  ||||||||| |||| | ||||||||||||| || |||| |||||||    
T  35315197 aggtggtccaccatatgccttactaaatttttttattttaaccattttattttttctttaaaa 35315135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 4167581 - 4167669
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| ||||||||||||||||| |||| ||| ||||  ||||| |||| |||||| |||| |||||||    
T  4167581 aaatttctaaggtgaaccatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcaaccttttgattttttctttaaaa 4167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 11344637 - 11344729
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagag 111  Q
    ||||||||| ||||| |||||||||||| | || ||||||| ||| || ||| || | |||||| ||||||| ||| | || |||||||||||    
T  11344637 aaatatctatggtggtccaacattatagatagtgcaccatataccctattaatttctttaatttaaaccattcgatttattttttaaaaagag 11344729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 14109057 - 14108969
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| |||||||||||||||||||||| |||  |||  |||||||||| ||| || |||| |||||||    
T  14109057 aaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaaccttttaattttttctttaaaa 14108969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 14419014 - 14418926
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| |||||||||||||||||||||| |||  |||  |||||||||| ||| || |||| |||||||    
T  14419014 aaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaaccttttaattttttctttaaaa 14418926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 24495009 - 24494957
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||  ||||| ||| |||| |||||||||||||||||| ||||    
T  24495009 gtggtccaccatatgccttattaatttttttaattttaaccatttgatttttt 24494957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 51299413 - 51299543
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgtt 118  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||  ||  ||| |||||| |||| |||||| |||||||||||| ||||||| ||    
T  51299413 aaatatttaaggtagaccaacattgtaggtggtccaccatagaccttataaaactttttaatttaaaccctttgatcttttatttaaaatgagaatcatt 51299512  T
Q  119 gaattgtgcatgtctattctatcttatagtg 149  Q
    | ||  |||  ||||||| ||||||| ||||    
T  51299513 ggatcatgctggtctattgtatcttacagtg 51299543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 51300235 - 51300166
Alignment:
Q  27 aaggtggaccaacattataggtggtccaccatagaccttactaagttttat-aattttaaccatttgatat 96  Q
    ||||||||||||||||| | |||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  51300235 aaggtggaccaacattaaaagtggtccaccatagaccttattaa-ttttatgaattttaaccatttgatat 51300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 7161295 - 7161226
Alignment:
Q  30 gtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    ||||||||||||||||| | ||||||||||||||||| ||| ||||| ||||||||||||| ||| ||||    
T  7161295 gtggaccaacattatagatagtccaccatagaccttaataatttttaaaattttaaccattagatctttt 7161226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 8092728 - 8092775
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8092728 aaatatctaaggtgaaccaactttataggtggtccaccatagacctta 8092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 34258696 - 34258627
Alignment:
Q  18 aaaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaacc 87  Q
    ||||||||||||||||||||||||| || | ||||||||||| |||||| ||| || | |||||||||||    
T  34258696 aaaatatctaaggtggaccaacattgtatgcggtccaccataaaccttattaatttatttaattttaacc 34258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 40811404 - 40811469
Alignment:
Q  41 ttataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaa 106  Q
    |||||||||||||||||||||||||| ||| | || || |||||||| ||||||||||| ||||||    
T  40811404 ttataggtggtccaccatagaccttattaaatcttttatttttaaccgtttgatattttttttaaa 40811469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 21277124 - 21277171
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  21277124 aaatgtctaaggtgaaccaactttataggtggtccaccatagacctta 21277171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 51726830 - 51726783
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  51726830 aaatgtctaaggtgaaccaactttataggtggtccaccatagacctta 51726783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 29001108 - 29001062
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctt 65  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||    
T  29001108 aaatatctaaagtggaccaatattatatgtggtccaccatagacctt 29001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 9415754 - 9415833
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||| |||| ||| ||||||||||||||||  |||||| | || ||| ||||||||||| |||||| ||||    
T  9415754 aaatatctaaggtgaaccagcatcataggtggtccaccatgcacctta-ttagatttttaattttaaccctttgatctttt 9415833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 23082112 - 23082024
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||| ||| ||||   ||| |||||||||||||| ||||||| ||| |||| ||||||||||  |||||| |||| |||||||    
T  23082112 aaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttaataaattttttaattttaacattttgattttttttttaaaa 23082024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 30535652 - 30535585
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaacc 87  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||||| | | |||| |||||||||||    
T  30535652 aaatgtctatggtggaccaacattatagatagtccaccatagaccttattta-ttttttaattttaacc 30535585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 14169749 - 14169796
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| |||||| |||||||||| |||||||||||||||    
T  14169749 aaatgtctaaggtgaaccaactttataggtggcccaccatagacctta 14169796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 14764385 - 14764448
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaa 108  Q
    |||||||||||||||  || |||||| |||| | |||||||||||||||| |||| ||||||||    
T  14764385 aggtggtccaccatacgccatactaaatttttttattttaaccatttgattttttctttaaaaa 14764448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 16757507 - 16757460
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| |||||| ||||||||||||||| |||||||| |||||||||||    
T  16757507 aaatgtctaagatggaccaacattataagtggtccatcatagacctta 16757460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 19466191 - 19466117
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||| |||| ||||||| |||||||||| | ||||||||||||||||| ||| |||| |||||| | |||||||||    
T  19466191 aaatgtctatggtggactaacattatagatagtccaccatagaccttattaa-ttttttaatttcagccatttgat 19466117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 36509941 - 36510015
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||| |||| ||||||| |||||||||| |  |||||||||||||||| ||| |||| |||||||| |||||||||    
T  36509941 aaatgtctatggtggactaacattatagatattccaccatagaccttattaa-ttttttaattttagccatttgat 36510015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 46110414 - 46110501
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaa 106  Q
    ||||||||| ||||||||||| |||   |||||||| | ||||||||| ||| |||  ||||||||||| |||||| |||| ||||||    
T  46110414 aaatatctatggtggaccaaccttaagagtggtccatcgtagaccttattaattttgttaattttaaccgtttgatcttttttttaaa 46110501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 50678498 - 50678580
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||||| ||||   ||| ||||||| ||||||||||| || ||| |||| |||||||||||||||||| |||| |||||||    
T  50678498 tctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttt-taattttaaccatttgattttttctttaaaa 50678580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 22766806 - 22766716
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaag 109  Q
    |||||||||| ||| ||||   ||| |||||||||||||| ||||||  ||| |||| ||||||||||| |||||| |||| ||| |||||    
T  22766806 aaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttcataaattttttaattttaaccttttgatttttttttttaaaag 22766716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 30551549 - 30551487
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||| |||||| ||||||| ||| |||| ||||||||||| |||||| |||| |||||||    
T  30551549 aggtggtgcaccatggaccttagtaaattttttaattttaaccttttgattttttctttaaaa 30551487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 9633905 - 9633990
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttattta 104  Q
    |||| ||||||||| ||||   ||| |||||||||||||||||||||| ||| ||||  |||||| ||| |||||| |||| ||||    
T  9633905 aaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaatttttaaattttgaccctttgattttttcttta 9633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 15850645 - 15850561
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttattta 104  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||| | || ||| ||||||||||| |||||| |||| ||||    
T  15850645 aaatgtctaaggtgaaccaacattataggtggtccaccatagatcttaat-agatttttaattttaaccctttgatcttttgttta 15850561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 28562793 - 28562713
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||| || |||||||||||||||||| | ||||||||||||||||| ||| ||||  |||||||||| |||||| ||||    
T  28562793 aaatatatatggtggaccaacattatagatagtccaccatagaccttattaaattttccaattttaaccctttgatctttt 28562713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 14509339 - 14509425
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaa 105  Q
    |||| ||||||||  |||||| |||||||||||||||||||||||||| |||   || || |||||||| ||||||||||| |||||    
T  14509339 aaatgtctaaggtaaaccaactttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatattttttttaa 14509425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 4829595 - 4829675
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||  |||||| |||||||||||||||||||||||| |  ||  ||| ||||| |||||||||||| ||||    
T  4829595 aaatatctaaggtaaaccaactttataggtggtccaccatagacctcataaatctttctaattctaaccatttgatttttt 4829675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 25570856 - 25570768
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||| ||| | || || ||||||   |||||| |||| |||||||    
T  25570856 aaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatattttatttttaaaggtttgatcttttttttaaaa 25570768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 35799642 - 35799730
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| | |||| ||||| |||||| ||||||||| ||| ||| | |||||||||||||| |||||| |||| |||||||    
T  35799642 aaatgtctaaggtgaatcaactttataagtggtctaccatagactttattaaatgttataattttaaccgtttgatcttttttttaaaa 35799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 9472757 - 9472831
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    ||||||||||| |||||||||||| || |||||| |||||||||| || ||| |||| |||||||| |||||||||    
T  9472757 aaatatctaagatggaccaacattgtatgtggtctaccatagaccatattaa-ttttttaattttatccatttgat 9472831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 2277452 - 2277366
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaa 105  Q
    |||| |||| |||||||||||||  ||| | ||||||||||||||||| ||| ||||  |||||||||| |||||| |||| |||||    
T  2277452 aaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttttcaattttaaccctttgatcttttttttaa 2277366  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 10367369 - 10367449
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |   ||| |||||||| |||||| ||||    
T  10367369 aaatgtctaaggtgaaccaactttataggtggtccacaatagaccttattaaatcacatacttttaaccgtttgatctttt 10367449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 12959691 - 12959611
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |   ||| |||||||| |||||| ||||    
T  12959691 aaatgtctaaggtgaaccaactttataggtggtccacaatagaccttattaaatcacatatttttaaccttttgatctttt 12959611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 34513504 - 34513402
Alignment:
Q  51 tccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgttgaattgtgcatgtctattctatcttatagtgt 150  Q
    |||||||||||||||| ||| |||| |||||| |||| |||||| | || ||||||||||  ||| ||| ||| ||| |||||||| || ||||  ||||    
T  34513504 tccaccatagaccttattaatttttttaatttaaaccgtttgatctgttttttaaaaagatgatcattggattatgcgtgtctattgtaacttacggtgt 34513405  T
Q  151 acc 153  Q
    |||    
T  34513404 acc 34513402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 7037096 - 7037189
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagaga 112  Q
    |||||||||||||| | |||| ||||||||| |||||| || |||||| ||| | ||  | |||||||| |||||| |||| ||||||| ||||    
T  7037096 aaatatctaaggtgaatcaactttataggtgatccaccgtaaaccttattaaatctttcatttttaaccgtttgatcttttttttaaaaggaga 7037189  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 12853012 - 12853104
Alignment:
Q  14 catcaaaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||| |||||||||| ||||   ||| ||||||| ||||||||||| || ||| ||||  ||||||||||||||||| | || |||||||    
T  12853012 catcaaaa-atctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttgaattttaaccatttgatttattctttaaaa 12853104  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 34147269 - 34147350
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttat-aattttaaccatttgatatttt 99  Q
    |||| |||| |||||||||||||  ||| | ||||||||||||||||| ||| |||| | |||||||||| |||||| ||||    
T  34147269 aaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaatttttttcaattttaaccctttgatctttt 34147350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 4512264 - 4512324
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||  ||||| ||| |||| ||||||| |||||||||| |||| |||||||    
T  4512264 gtggtccaccatatgccttattaatttttttaattttgaccatttgattttttctttaaaa 4512324  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 14714622 - 14714710
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| |||||||||||||||  ||||| ||| |||| |||||  ||||||||||| |||| |||||||    
T  14714622 aaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaatttttttaattgcaaccatttgattttttctttaaaa 14714710  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 34467667 - 34467719
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    ||||||||||||| |||||| |||||||| |||||| |||  |||||||||||    
T  34467667 gtggtccaccataaaccttattaagttttttaatttaaactgtttgatatttt 34467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 37869026 - 37868946
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| |||||||||  ||||| ||||||||||||||| |||||||||| ||| |   ||| |||||||| |||||| ||||    
T  37869026 aaatgtctaaggtgagccaactttataggtggtccacaatagaccttattaaatcacatacttttaaccgtttgatctttt 37868946  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 293626 - 293546
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||| ||| |   ||| ||||||||||||||| ||||    
T  293626 aaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaataacatatttttaaccatttgatctttt 293546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 14328760 - 14328713
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  14328760 aaatgtctaaggtgaaccaactttataggtggtccaccatagacctta 14328713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 14421770 - 14421723
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacctta 66  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  14421770 aaatgtctaaggtgaaccaactttataggtggtccaccatagacctta 14421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7313019 - 7312963
Alignment:
Q  26 taaggtggaccaacattataggtggtccaccatagaccttactaagttttataattt 82  Q
    |||||||||||||||||||| |||||||||||||| | ||| ||| |||| ||||||    
T  7313019 taaggtggaccaacattatatgtggtccaccataggctttaataatttttttaattt 7312963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 15728863 - 15728907
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagacc 63  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||    
T  15728863 aaatatctatggtggaccaacattatagatagtccaccatagacc 15728907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 2130913 - 2130993
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||||| |||| | ||||||||||| ||||||||| || |  ||  ||| ||||| |||||||||||| ||||    
T  2130913 aaatatctaaggtgaaccacctttataggtggttcaccatagatctcataaatctttctaattctaaccatttgatttttt 2130993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 7312254 - 7312187
Alignment:
Q  31 tggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||||||||||| |||||||| |||| |||| |||| ||| |||| |||||| ||||||||||| ||||    
T  7312254 tggaccaacattgtaggtggttcaccgtagatcttattaa-ttttttaatttcaaccatttgatctttt 7312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 12773200 - 12773280
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| ||||||||||| ||||||| |||   ||||||||||||||||||| | ||||  ||||| ||||||| ||| ||||    
T  12773200 aaatgtctaaggtggatcaacattgtagactgtccaccatagaccttacttattttttaaatttgaaccattagatctttt 12773280  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 207758 - 207696
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||||||||||||||  ||||||||| |||| |||||||||||||||||| |||| |||||||    
T  207758 aggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaaaa 207696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 22123 - 22188
Alignment:
Q  29 ggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgat 94  Q
    |||||||||||||| |||||||||||||||||||| || ||| || | |||||| |||||||||||    
T  22123 ggtggaccaacattgtaggtggtccaccatagaccctattaatttctttaatttaaaccatttgat 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 41038 - 41126
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| |||||||||||||||  ||||||||| |||| | |||||||||||||||| |||| |||||||    
T  41038 aaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaatttttttattttaaccatttgattttttttttaaaa 41126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 16075 - 16155
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatatttt 99  Q
    |||| |||||| || |||||| |||||| ||||||||||||||||||| |||   || || |||||||| |||||||||||    
T  16075 aaatgtctaagatgaaccaactttatagatggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttt 16155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 636 - 573
Alignment:
Q  47 gtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaaga 110  Q
    |||||||||||||||||||| ||| |||| |||||| |||| |||||| | || ||||||||||    
T  636 gtggtccaccatagaccttattaaattttttaatttaaaccgtttgatctgttttttaaaaaga 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 152045 - 151998
Alignment:
Q  17 caaaatatctaaggtggaccaacattataggtggtccaccatagacct 64  Q
    |||||||| |||| | ||||||||||||||||||||||||| ||||||    
T  152045 caaaatatttaagatagaccaacattataggtggtccaccaaagacct 151998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 39861 - 39799
Alignment:
Q  45 aggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    ||||||| |||||| |||| || ||| |||| |||||||||||||||||| |||| |||||||    
T  39861 aggtggttcaccatggaccgtattaaattttttaattttaaccatttgattttttctttaaaa 39799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 77160 - 77071
Alignment:
Q  24 tctaaggtggaccaacattataggtggtccaccatagaccttactaagttt-tataattttaaccatttgatattttatttaaaaagagaa 113  Q
    ||||||||| ||||   ||| |||||||||||||| ||||||| ||||||  | ||||||||||||||||||||||| || ||||| ||||    
T  77160 tctaaggtgaaccatatttaaaggtggtccaccattgacctta-taagttcatttaattttaaccatttgatatttttttcaaaaatagaa 77071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 615 - 511
Alignment:
Q  18 aaaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgt 117  Q
    |||| |||||||||| ||||   ||| || |||| |||| |||| |||| ||| |||| |||||||||||||||||| |||| ||| ||| ||||| |||    
T  615 aaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttt-aaatgagaaccgt 517  T
Q  118 tgaatt 123  Q
    ||||||    
T  516 tgaatt 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 659 - 763
Alignment:
Q  18 aaaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaaagagaatcgt 117  Q
    |||| |||||||||| ||||   ||| || |||| |||| |||| |||| ||| |||| |||||||||||||||||| |||| ||| ||| ||||| |||    
T  659 aaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttcttt-aaatgagaaccgt 757  T
Q  118 tgaatt 123  Q
    ||||||    
T  758 tgaatt 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 13190 - 13102
Alignment:
Q  19 aaatatctaaggtggaccaacattataggtggtccaccatagaccttactaagttttataattttaaccatttgatattttatttaaaa 107  Q
    |||| ||||||||| ||||   ||| || |||||||||||| ||| ||||||  ||| |||| ||||||||||||| |||| |||||||    
T  13190 aaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaaaatttttaatcttaaccatttgattttttctttaaaa 13102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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