View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8888_low_133 (Length: 215)
Name: NF8888_low_133
Description: NF8888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8888_low_133 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 39978978 - 39979179
Alignment:
| Q |
1 |
ccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctggtccttcaaaccagcatcagttggtacatttcttgcacttgttgtag |
100 |
Q |
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| T |
39978978 |
ccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctggtccttcaaaccagcatcagttggtacatttcttgcacttgttgtag |
39979077 |
T |
|
| Q |
101 |
ccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctcccacttactaggaatatgtataataactgcactcactctcgctctcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
39979078 |
ccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctcccacttactaggaatatgtataataactgcactcactctcactctcc |
39979177 |
T |
|
| Q |
201 |
ct |
202 |
Q |
| |
|
|| |
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|
| T |
39979178 |
ct |
39979179 |
T |
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