View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8888_low_26 (Length: 502)

Name: NF8888_low_26
Description: NF8888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8888_low_26
NF8888_low_26
[»] chr6 (31 HSPs)
chr6 (10-487)||(6909748-6910226)
chr6 (204-322)||(24626207-24626324)
chr6 (274-343)||(34430481-34430550)
chr6 (190-344)||(6538415-6538563)
chr6 (275-343)||(6536597-6536665)
chr6 (268-343)||(26694853-26694928)
chr6 (270-343)||(837236-837309)
chr6 (218-343)||(35098961-35099087)
chr6 (267-343)||(9093576-9093652)
chr6 (272-324)||(11784069-11784121)
chr6 (190-296)||(30926436-30926536)
chr6 (268-343)||(415279-415354)
chr6 (269-343)||(20368200-20368274)
chr6 (267-343)||(4006688-4006764)
chr6 (204-322)||(8147615-8147731)
chr6 (288-343)||(835269-835324)
chr6 (277-340)||(31812036-31812099)
chr6 (272-333)||(8201212-8201273)
chr6 (267-339)||(2735043-2735115)
chr6 (267-343)||(13907559-13907635)
chr6 (268-343)||(836561-836636)
chr6 (196-247)||(29754194-29754245)
chr6 (191-253)||(14164022-14164083)
chr6 (196-259)||(18610972-18611037)
chr6 (190-259)||(35070733-35070803)
chr6 (196-229)||(10401141-10401174)
chr6 (267-320)||(28621153-28621206)
chr6 (275-343)||(2206572-2206640)
chr6 (215-259)||(30536661-30536705)
chr6 (291-343)||(31624088-31624140)
chr6 (291-323)||(33067156-33067188)
[»] chr2 (62 HSPs)
chr2 (181-343)||(41241152-41241313)
chr2 (191-342)||(41851434-41851584)
chr2 (201-343)||(12464493-12464634)
chr2 (190-343)||(33319832-33319985)
chr2 (209-343)||(45229429-45229561)
chr2 (190-310)||(41407199-41407319)
chr2 (202-298)||(42659216-42659311)
chr2 (190-338)||(32592485-32592631)
chr2 (267-343)||(1625874-1625950)
chr2 (276-343)||(29628763-29628830)
chr2 (189-424)||(43279469-43279700)
chr2 (269-343)||(40279173-40279247)
chr2 (267-343)||(18066102-18066178)
chr2 (268-343)||(26626848-26626923)
chr2 (268-331)||(33941884-33941947)
chr2 (267-340)||(2142627-2142701)
chr2 (267-343)||(1810639-1810714)
chr2 (267-343)||(11513872-11513948)
chr2 (180-252)||(31561863-31561935)
chr2 (196-251)||(11863835-11863890)
chr2 (175-343)||(26201911-26202078)
chr2 (199-258)||(41293264-41293323)
chr2 (273-343)||(680483-680553)
chr2 (190-290)||(42868534-42868633)
chr2 (267-340)||(3611200-3611273)
chr2 (180-253)||(22971626-22971699)
chr2 (296-433)||(31561675-31561809)
chr2 (271-324)||(39073728-39073781)
chr2 (267-316)||(41407049-41407098)
chr2 (267-304)||(43199852-43199889)
chr2 (267-343)||(12313193-12313269)
chr2 (276-324)||(33931609-33931657)
chr2 (267-343)||(42457922-42457998)
chr2 (271-310)||(10490607-10490646)
chr2 (267-310)||(10494642-10494685)
chr2 (274-333)||(11201412-11201471)
chr2 (280-343)||(20952342-20952405)
chr2 (191-241)||(10258575-10258625)
chr2 (267-305)||(36114581-36114619)
chr2 (289-343)||(40279263-40279317)
chr2 (289-343)||(40279333-40279387)
chr2 (289-343)||(40279403-40279457)
chr2 (374-451)||(40400815-40400892)
chr2 (215-334)||(41812120-41812237)
chr2 (267-321)||(43199388-43199442)
chr2 (293-343)||(43985023-43985073)
chr2 (350-447)||(449903-449998)
chr2 (278-343)||(5759595-5759660)
chr2 (268-333)||(8017409-8017474)
chr2 (267-308)||(9750920-9750961)
chr2 (267-315)||(15757706-15757755)
chr2 (267-340)||(36114393-36114466)
chr2 (271-332)||(39659540-39659601)
chr2 (62-107)||(41796073-41796118)
chr2 (268-321)||(43911041-43911094)
chr2 (267-343)||(4026791-4026867)
chr2 (272-343)||(12289775-12289847)
chr2 (274-326)||(25800810-25800862)
chr2 (295-343)||(26143660-26143708)
chr2 (271-343)||(29316795-29316867)
chr2 (267-307)||(42907333-42907373)
chr2 (267-315)||(44439408-44439456)
[»] chr3 (57 HSPs)
chr3 (196-343)||(53789481-53789627)
chr3 (190-343)||(35959476-35959628)
chr3 (190-330)||(30956659-30956798)
chr3 (190-330)||(30972471-30972610)
chr3 (204-340)||(583958-584093)
chr3 (186-340)||(20880371-20880523)
chr3 (186-343)||(3845582-3845738)
chr3 (219-340)||(18405854-18405975)
chr3 (267-445)||(21367641-21367816)
chr3 (269-343)||(30443869-30443943)
chr3 (267-340)||(14145886-14145959)
chr3 (267-339)||(36631075-36631147)
chr3 (272-343)||(47132310-47132381)
chr3 (269-343)||(46778211-46778284)
chr3 (271-448)||(39980707-39980881)
chr3 (271-340)||(44061046-44061115)
chr3 (185-342)||(2719362-2719517)
chr3 (268-343)||(28622019-28622094)
chr3 (272-330)||(12862281-12862338)
chr3 (267-305)||(20257509-20257547)
chr3 (206-305)||(37689147-37689243)
chr3 (186-305)||(20170417-20170535)
chr3 (280-333)||(22203417-22203470)
chr3 (270-343)||(46886712-46886785)
chr3 (267-343)||(402562-402638)
chr3 (197-253)||(46778336-46778392)
chr3 (284-343)||(44747428-44747487)
chr3 (267-333)||(33405197-33405263)
chr3 (267-333)||(36189540-36189606)
chr3 (271-333)||(49034293-49034355)
chr3 (267-343)||(1816557-1816633)
chr3 (272-340)||(16073066-16073134)
chr3 (267-343)||(25348815-25348891)
chr3 (267-319)||(25447288-25447340)
chr3 (283-343)||(26990511-26990571)
chr3 (272-304)||(31365359-31365391)
chr3 (267-323)||(35127411-35127467)
chr3 (190-233)||(35127490-35127533)
chr3 (267-309)||(849636-849678)
chr3 (276-310)||(11492596-11492630)
chr3 (205-259)||(19983693-19983747)
chr3 (269-323)||(31106153-31106207)
chr3 (269-319)||(32095235-32095285)
chr3 (293-343)||(36887504-36887554)
chr3 (190-247)||(1508696-1508753)
chr3 (267-340)||(21335649-21335722)
chr3 (236-343)||(39602230-39602335)
chr3 (62-107)||(43526492-43526537)
chr3 (409-450)||(44014714-44014755)
chr3 (276-321)||(47587451-47587496)
chr3 (201-241)||(139794-139834)
chr3 (197-249)||(466107-466159)
chr3 (267-323)||(19679368-19679424)
chr3 (67-107)||(24627464-24627504)
chr3 (271-343)||(26878095-26878167)
chr3 (351-443)||(31365232-31365322)
chr3 (283-343)||(36507111-36507171)
[»] chr5 (64 HSPs)
chr5 (205-450)||(10639866-10640107)
chr5 (271-449)||(16937800-16937975)
chr5 (190-343)||(25460990-25461141)
chr5 (269-343)||(10272451-10272525)
chr5 (197-343)||(16457999-16458143)
chr5 (188-324)||(31038195-31038325)
chr5 (188-324)||(31047419-31047549)
chr5 (267-343)||(12425545-12425621)
chr5 (190-324)||(31051796-31051924)
chr5 (268-315)||(12554494-12554541)
chr5 (269-340)||(39105440-39105511)
chr5 (267-343)||(32703296-32703370)
chr5 (275-343)||(25461336-25461404)
chr5 (271-343)||(29925819-29925891)
chr5 (190-324)||(32372522-32372655)
chr5 (267-334)||(17652235-17652302)
chr5 (280-343)||(36318761-36318824)
chr5 (280-343)||(43300865-43300928)
chr5 (205-259)||(3735594-3735648)
chr5 (268-340)||(2568632-2568705)
chr5 (185-250)||(7319123-7319188)
chr5 (190-340)||(24030424-24030574)
chr5 (190-251)||(26005349-26005410)
chr5 (280-333)||(32942605-32942658)
chr5 (267-343)||(7319380-7319456)
chr5 (267-343)||(7674622-7674698)
chr5 (291-343)||(7984967-7985019)
chr5 (269-333)||(32009668-32009732)
chr5 (280-343)||(7907868-7907931)
chr5 (190-253)||(25461864-25461927)
chr5 (280-343)||(36325998-36326061)
chr5 (269-332)||(42646891-42646954)
chr5 (275-341)||(6587129-6587195)
chr5 (267-341)||(9202770-9202844)
chr5 (269-343)||(17368652-17368726)
chr5 (190-338)||(25461672-25461818)
chr5 (271-333)||(34102344-34102406)
chr5 (294-343)||(4014444-4014493)
chr5 (196-333)||(40438983-40439121)
chr5 (177-253)||(1130854-1130930)
chr5 (278-338)||(28776978-28777038)
chr5 (267-319)||(34205213-34205265)
chr5 (190-238)||(36797200-36797248)
chr5 (279-322)||(443921-443964)
chr5 (269-308)||(3520360-3520399)
chr5 (236-329)||(34736561-34736652)
chr5 (272-318)||(5559704-5559750)
chr5 (300-342)||(7319029-7319071)
chr5 (277-343)||(18543217-18543282)
chr5 (277-343)||(23994736-23994802)
chr5 (199-229)||(28776892-28776922)
chr5 (274-304)||(29815146-29815176)
chr5 (273-343)||(35445863-35445933)
chr5 (267-344)||(42582707-42582789)
chr5 (267-340)||(40426739-40426812)
chr5 (267-340)||(41981888-41981961)
chr5 (267-343)||(1465040-1465115)
chr5 (269-333)||(2563186-2563250)
chr5 (354-450)||(7705914-7706008)
chr5 (361-433)||(11064733-11064803)
chr5 (211-251)||(17652172-17652212)
chr5 (267-323)||(18857440-18857496)
chr5 (292-324)||(36145277-36145309)
chr5 (267-343)||(42583123-42583199)
[»] chr7 (59 HSPs)
chr7 (209-450)||(4970708-4970941)
chr7 (267-450)||(17944259-17944439)
chr7 (209-337)||(30570957-30571084)
chr7 (267-385)||(33601390-33601505)
chr7 (196-310)||(46078051-46078166)
chr7 (267-343)||(46280292-46280368)
chr7 (268-340)||(47177611-47177683)
chr7 (267-338)||(15309590-15309661)
chr7 (272-387)||(33602005-33602117)
chr7 (269-343)||(48507698-48507773)
chr7 (268-342)||(40252128-40252202)
chr7 (267-333)||(40377882-40377948)
chr7 (275-424)||(34744010-34744156)
chr7 (275-343)||(420342-420410)
chr7 (271-343)||(39907781-39907853)
chr7 (268-343)||(20269551-20269626)
chr7 (267-333)||(12110334-12110400)
chr7 (269-343)||(20881656-20881730)
chr7 (216-343)||(39279887-39280012)
chr7 (267-340)||(20526420-20526493)
chr7 (232-310)||(119850-119927)
chr7 (272-424)||(19022527-19022676)
chr7 (267-343)||(22283764-22283840)
chr7 (267-343)||(27863745-27863821)
chr7 (267-343)||(33678754-33678830)
chr7 (267-339)||(43694594-43694666)
chr7 (267-343)||(44821933-44822009)
chr7 (267-343)||(45790445-45790521)
chr7 (196-298)||(45263997-45264100)
chr7 (269-332)||(48470020-48470083)
chr7 (190-310)||(45806530-45806649)
chr7 (270-343)||(37064484-37064557)
chr7 (186-247)||(38500033-38500094)
chr7 (268-333)||(38639989-38640054)
chr7 (278-343)||(43648225-43648290)
chr7 (190-242)||(3308372-3308424)
chr7 (271-315)||(19302607-19302651)
chr7 (268-338)||(17248530-17248598)
chr7 (204-259)||(21568731-21568786)
chr7 (272-343)||(33673056-33673127)
chr7 (267-310)||(34083578-34083621)
chr7 (190-343)||(38138499-38138651)
chr7 (272-343)||(45338428-45338498)
chr7 (268-338)||(5569661-5569731)
chr7 (267-305)||(13960890-13960928)
chr7 (275-321)||(19718989-19719034)
chr7 (271-333)||(20258490-20258552)
chr7 (267-333)||(30456480-30456546)
chr7 (293-343)||(47130805-47130855)
chr7 (295-341)||(48917368-48917414)
chr7 (267-324)||(8960666-8960723)
chr7 (187-228)||(20881760-20881801)
chr7 (196-253)||(33128661-33128718)
chr7 (268-321)||(39279738-39279791)
chr7 (267-340)||(40689009-40689082)
chr7 (62-94)||(31512035-31512067)
chr7 (271-343)||(31744287-31744359)
chr7 (269-309)||(31771703-31771743)
chr7 (267-343)||(39967894-39967970)
[»] chr4 (64 HSPs)
chr4 (190-333)||(50681119-50681261)
chr4 (269-340)||(17822888-17822959)
chr4 (198-343)||(55414440-55414584)
chr4 (277-450)||(21731572-21731742)
chr4 (204-303)||(22030116-22030213)
chr4 (180-447)||(41336649-41336911)
chr4 (267-343)||(51630085-51630161)
chr4 (267-343)||(53294134-53294210)
chr4 (278-340)||(16200004-16200066)
chr4 (267-343)||(3155577-3155653)
chr4 (267-343)||(17884042-17884118)
chr4 (267-343)||(54392839-54392915)
chr4 (267-333)||(9760414-9760480)
chr4 (197-333)||(17204043-17204178)
chr4 (267-333)||(56480322-56480388)
chr4 (190-324)||(18425711-18425843)
chr4 (190-247)||(24169159-24169216)
chr4 (267-324)||(27043869-27043926)
chr4 (190-305)||(25904268-25904386)
chr4 (190-343)||(29912847-29912998)
chr4 (286-450)||(54426036-54426197)
chr4 (267-342)||(437265-437340)
chr4 (269-448)||(35571549-35571725)
chr4 (269-324)||(42685400-42685455)
chr4 (268-343)||(47118985-47119060)
chr4 (269-343)||(7694030-7694104)
chr4 (276-342)||(8422860-8422926)
chr4 (277-343)||(42121472-42121538)
chr4 (270-343)||(1407933-1408006)
chr4 (274-323)||(2996554-2996603)
chr4 (274-343)||(19395136-19395205)
chr4 (180-229)||(23277311-23277360)
chr4 (62-107)||(52707572-52707617)
chr4 (269-343)||(55064809-55064885)
chr4 (267-319)||(25885833-25885885)
chr4 (267-343)||(28300319-28300395)
chr4 (271-343)||(29388592-29388664)
chr4 (296-371)||(30668360-30668433)
chr4 (267-343)||(35064829-35064905)
chr4 (267-343)||(44138533-44138609)
chr4 (267-319)||(52746884-52746936)
chr4 (280-323)||(16494845-16494888)
chr4 (275-338)||(41512633-41512696)
chr4 (350-433)||(49939884-49939965)
chr4 (276-331)||(49940023-49940078)
chr4 (271-310)||(54069470-54069509)
chr4 (374-449)||(55437155-55437229)
chr4 (267-333)||(7601733-7601799)
chr4 (277-343)||(13126629-13126694)
chr4 (281-343)||(39691163-39691225)
chr4 (277-310)||(2465972-2466005)
chr4 (274-343)||(7839381-7839450)
chr4 (182-223)||(21731782-21731823)
chr4 (217-324)||(31076425-31076531)
chr4 (292-340)||(2111073-2111121)
chr4 (274-310)||(23277405-23277441)
chr4 (374-448)||(28615413-28615486)
chr4 (207-259)||(43505871-43505923)
chr4 (303-343)||(44249295-44249335)
chr4 (269-309)||(47946174-47946214)
chr4 (275-343)||(49202627-49202695)
chr4 (267-343)||(49219113-49219189)
chr4 (267-343)||(50004164-50004240)
chr4 (283-343)||(50662758-50662818)
[»] chr1 (81 HSPs)
chr1 (208-324)||(27976511-27976626)
chr1 (204-343)||(51688617-51688754)
chr1 (204-450)||(2295016-2295250)
chr1 (190-343)||(41195213-41195366)
chr1 (227-343)||(24915071-24915186)
chr1 (270-390)||(1432492-1432610)
chr1 (190-324)||(41505585-41505717)
chr1 (271-338)||(3234040-3234107)
chr1 (267-343)||(7218094-7218170)
chr1 (267-343)||(27820357-27820433)
chr1 (190-450)||(14576570-14576825)
chr1 (271-338)||(17603409-17603476)
chr1 (280-343)||(45975677-45975740)
chr1 (269-343)||(7472287-7472361)
chr1 (172-229)||(15784224-15784282)
chr1 (231-343)||(47432035-47432145)
chr1 (273-343)||(51695515-51695585)
chr1 (267-343)||(2294885-2294961)
chr1 (271-323)||(23445312-23445364)
chr1 (267-343)||(34290210-34290286)
chr1 (267-343)||(37769680-37769756)
chr1 (267-343)||(38018384-38018460)
chr1 (267-339)||(49888741-49888813)
chr1 (280-343)||(7137018-7137081)
chr1 (190-253)||(17830052-17830115)
chr1 (267-318)||(37295763-37295814)
chr1 (190-252)||(5741560-5741622)
chr1 (267-333)||(46225763-46225829)
chr1 (267-343)||(1509985-1510061)
chr1 (267-340)||(13809972-13810045)
chr1 (267-343)||(27970314-27970391)
chr1 (267-343)||(473138-473214)
chr1 (269-324)||(3069973-3070029)
chr1 (267-343)||(10809319-10809395)
chr1 (267-323)||(25006074-25006130)
chr1 (267-343)||(34952189-34952265)
chr1 (267-343)||(37842375-37842451)
chr1 (205-338)||(42174770-42174900)
chr1 (269-424)||(6556947-6557100)
chr1 (190-252)||(5720879-5720941)
chr1 (276-318)||(12287237-12287279)
chr1 (280-414)||(49938734-49938865)
chr1 (180-229)||(11893084-11893133)
chr1 (267-300)||(15477552-15477585)
chr1 (267-343)||(10799436-10799512)
chr1 (190-250)||(14331687-14331747)
chr1 (267-327)||(17778932-17778991)
chr1 (267-343)||(29793756-29793832)
chr1 (267-343)||(31517760-31517836)
chr1 (267-315)||(38578501-38578549)
chr1 (292-343)||(6102153-6102204)
chr1 (280-343)||(14331970-14332032)
chr1 (205-248)||(24552454-24552497)
chr1 (292-343)||(26779945-26779996)
chr1 (388-450)||(32515357-32515420)
chr1 (275-333)||(7244688-7244746)
chr1 (293-343)||(12564519-12564569)
chr1 (190-240)||(17834158-17834208)
chr1 (267-305)||(30581776-30581814)
chr1 (268-310)||(33186241-33186283)
chr1 (277-343)||(36872716-36872782)
chr1 (273-343)||(37631579-37631649)
chr1 (274-343)||(7107537-7107606)
chr1 (270-307)||(11218001-11218038)
chr1 (286-343)||(14629986-14630043)
chr1 (286-343)||(25479574-25479631)
chr1 (278-343)||(35590912-35590977)
chr1 (204-253)||(37473311-37473360)
chr1 (267-324)||(37517233-37517290)
chr1 (190-243)||(38247351-38247404)
chr1 (274-323)||(39596578-39596627)
chr1 (272-305)||(42391344-42391377)
chr1 (202-296)||(44932002-44932092)
chr1 (275-343)||(1510330-1510398)
chr1 (267-343)||(4576779-4576855)
chr1 (267-323)||(17269224-17269280)
chr1 (281-317)||(28287798-28287834)
chr1 (267-315)||(30581996-30582044)
chr1 (204-252)||(42391278-42391326)
chr1 (281-329)||(42556665-42556713)
chr1 (267-343)||(51160509-51160585)
[»] chr8 (50 HSPs)
chr8 (204-433)||(27028751-27028968)
chr8 (220-343)||(25930574-25930696)
chr8 (190-342)||(29168078-29168224)
chr8 (269-333)||(29205784-29205848)
chr8 (190-315)||(10758304-10758428)
chr8 (172-324)||(42043384-42043536)
chr8 (196-343)||(12976117-12976262)
chr8 (201-315)||(38750267-38750380)
chr8 (267-450)||(38648325-38648505)
chr8 (190-339)||(1058100-1058246)
chr8 (267-343)||(37353269-37353345)
chr8 (400-451)||(43045640-43045691)
chr8 (293-343)||(9956834-9956884)
chr8 (269-343)||(18133632-18133706)
chr8 (269-323)||(24558829-24558883)
chr8 (267-310)||(16734003-16734046)
chr8 (196-259)||(32975964-32976027)
chr8 (197-321)||(8146229-8146358)
chr8 (280-330)||(32841341-32841391)
chr8 (269-339)||(38602309-38602379)
chr8 (270-343)||(10120733-10120806)
chr8 (267-424)||(26771239-26771393)
chr8 (267-339)||(35534637-35534707)
chr8 (267-343)||(16210906-16210982)
chr8 (277-341)||(30251476-30251540)
chr8 (275-343)||(43504733-43504801)
chr8 (277-324)||(12010870-12010917)
chr8 (192-247)||(37945489-37945544)
chr8 (281-343)||(8062317-8062379)
chr8 (220-333)||(11861735-11861844)
chr8 (267-333)||(14242886-14242952)
chr8 (281-343)||(34290857-34290919)
chr8 (177-247)||(38353235-38353305)
chr8 (213-258)||(4526360-4526405)
chr8 (274-339)||(6881908-6881972)
chr8 (274-319)||(9834833-9834878)
chr8 (190-247)||(14956410-14956467)
chr8 (409-450)||(16162873-16162914)
chr8 (272-333)||(16736063-16736124)
chr8 (286-343)||(28769359-28769416)
chr8 (270-323)||(29891061-29891114)
chr8 (190-235)||(31916523-31916568)
chr8 (267-323)||(6509343-6509399)
chr8 (267-319)||(7918817-7918869)
chr8 (267-343)||(21653055-21653131)
chr8 (67-107)||(28710063-28710103)
chr8 (67-107)||(28717410-28717450)
chr8 (59-107)||(41314296-41314344)
chr8 (202-234)||(41442553-41442585)
chr8 (280-340)||(43717960-43718020)
[»] scaffold0528 (1 HSPs)
scaffold0528 (188-324)||(1011-1141)
[»] scaffold0018 (2 HSPs)
scaffold0018 (190-258)||(158005-158073)
scaffold0018 (267-343)||(178345-178421)
[»] scaffold0475 (1 HSPs)
scaffold0475 (267-304)||(11814-11851)
[»] scaffold0167 (1 HSPs)
scaffold0167 (292-329)||(17275-17312)
[»] scaffold0024 (1 HSPs)
scaffold0024 (267-320)||(27550-27603)


Alignment Details
Target: chr6 (Bit Score: 426; Significance: 0; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 10 - 487
Target Start/End: Complemental strand, 6910226 - 6909748
Alignment:
Q  10 gtttggtgttgagataaaattttgagcttatatttttcttacatgcttgtgactctatttggtaaaaa-tagcagatagttgataacttagcttatagcg 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6910226 gtttggtggtgagataaaattttgagcttatatttttcttacatgcttatgactctatttggtaaaaaatagcagatagttgataacttagcttatagcg 6910127  T
Q  109 aatggacttataaaggatagatgaaaaacatagtttatatagcagataagctagctgattgaaccctgtttgataaacagtttatatcacaagcacttat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6910126 aatggacttataaaggatagatgaaaaacatagtttatatagcagataagctagctgattgaaccctgtttgataaacagtttatatcacaagcacttat 6910027  T
Q  209 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 308  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6910026 catgataagtgcttatgtataaacttacataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcat 6909927  T
Q  309 aacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcacaaatc 408  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6909926 aacatatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcacaagcttattttcataagtttttcccaaacaatgtcacaaatc 6909827  T
Q  409 ttatgctagtagataaacttaaataggctaatccaaacaggcttgtagtgtttggtaggttgaactagcatgtaaatat 487  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6909826 ttatgctagtagataaacttaaataggctaatccaaacaggcttgtagtgtttggtaggttgaactagcatgtaaatat 6909748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 24626207 - 24626324
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||| |        ||||||||||||||||||||||| ||||||||||||    
T  24626207 cttatcatgatgattgcttatgtataagcttacataagctatttctataggaaaggataaaac-aaagttaaattgtttttgtatattctataagttgtt 24626305  T
Q  304 ttcataacctatcttggag 322  Q
    ||||||| |||||||||||    
T  24626306 ttcataagctatcttggag 24626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 34430550 - 34430481
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  34430550 aaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaa 34430481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 190 - 344
Target Start/End: Original strand, 6538415 - 6538563
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||||||||| |||||||| ||||||||||| |||| |||||| || || | ||| |||||       ||| |||||||||||| ||||||    
T  6538415 ttatagcacaagcacttataatgataagcgcttatgtataagcttgcataagttagttttttagcaaaaga------taatgttaaattgtttatgtata 6538508  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaat 344  Q
    |||||||||||||||| |||  |||| |||||||| |||| ||| |||| |||||    
T  6538509 tgctataagttgtttttataggctatattggagaacttattaaaataagttgaat 6538563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 6536597 - 6536665
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||||||||||| | || |||| ||||||||||||||||| |||| ||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaa 6536665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 26694853 - 26694928
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||  ||||||| ||||| |||||||||||| |||||||| |||| |||||||| |||||||||    
T  26694853 aaagttaaattgtttccgtatatgttataaattgttttcataaactatcttgaagaacttatgaaaataagctgaa 26694928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 837309 - 837236
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||| || || ||||||||| |||||||| | ||||||||||||| |||||||| |||||||||    
T  837309 agttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaa 837236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 35098961 - 35099087
Alignment:
Q  218 tgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaa-gttaaattgtttttgtatatgctataagttgttttcataacctatc 316  Q
    |||||||||||| |||||  |||||||||||||||||||||         ||  ||| ||||||||||||||||| |||||||||||||||||| |||||    
T  35098961 tgcttatgtataagcttaagtaagctatttctataggaaaaaaaataaaaaattgtttaattgtttttgtatatgttataagttgttttcataagctatc 35099060  T
Q  317 ttggagaatttatgaaattaagctgaa 343  Q
    || ||| |||| ||||| |||| ||||    
T  35099061 ttagagtatttttgaaaataagttgaa 35099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 9093652 - 9093576
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||| || |||| ||||| ||| |||| |||||||||    
T  9093652 taaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaa 9093576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 11784121 - 11784069
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  11784121 ttaaattgtttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 30926436 - 30926536
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||  ||||||||||||||   ||| ||||| ||||||||||||||||||||||| |||||       |||||||||||||||||||| ||    
T  30926436 ttatagcacaagggcttatcatgataagcaattaagtataagcttacataagctatttctatagtaaaag------ataaagttaaattgtttttgtgta 30926529  T
Q  290 tgctata 296  Q
    |||||||    
T  30926530 tgctata 30926536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 415279 - 415354
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| ||||  ||||||| ||||| ||| ||||||||    
T  415279 aaagttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaa 415354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 20368274 - 20368200
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| ||||||||||||||  | |||||||||||||||||| || |||||||||| |||||||| |||| ||||    
T  20368274 aagttgaattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaa 20368200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 4006688 - 4006764
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| |||||   ||||  |||||||| |||||||||    
T  4006688 taaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaa 4006764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 8147615 - 8147731
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    |||||||||||||| ||||| | ||| ||| ||||||||||||| ||||| |||||       ||||||| |||||||||||||||| ||| ||| ||||    
T  8147615 cttatcatgataagcgcttaagcataagct-acataagctatttttatagcaaaagataaaa-taaagttgaattgtttttgtatattctaaaagatgtt 8147712  T
Q  304 ttcataacctatcttggag 322  Q
    ||||||| |||| ||||||    
T  8147713 ttcataagctatattggag 8147731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 835324 - 835269
Alignment:
Q  288 tatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||  |||||||||| ||||||||||||| |||||||| |||||||||    
T  835324 tatgctataagcagttttcataagctatcttggagaacttatgaaaataagctgaa 835269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 31812099 - 31812036
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||| ||||||| | |||||||||||||||||| ||||||||||||  |||||||| ||||||    
T  31812099 ttgttattgtataagatataagttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 8201212 - 8201273
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||||||| ||| |||||||||||||| ||||  ||| |||||||| ||||||||    
T  8201212 ttaaattgtttttgtgtatcctataagttgtttttataagttatgttggagaacttatgaaa 8201273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 339
Target Start/End: Original strand, 2735043 - 2735115
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||| | |||||| | || |||||||| |||||    
T  2735043 taaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagc 2735115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 13907559 - 13907635
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| ||  ||| |||||  ||||||||||||||||||| | ||||||||||| |||||||| ||| |||||    
T  13907559 taaagttaatttactttcgtataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaa 13907635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 836636 - 836561
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||| ||||  ||||| || ||| ||||||| ||||||||| ||| |||||||| | |||||||    
T  836636 aaagttaaattgttttggtatgagctattagctgtgttcataagctatcttggggaacttatgaaaatgagctgaa 836561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 29754245 - 29754194
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    ||||||| |||||||||||||| ||||||||||  |||| ||||||||||||    
T  29754245 cacaagcgcttatcatgataagcgcttatgtattagcttgcataagctattt 29754194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 14164022 - 14164083
Alignment:
Q  191 tatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    |||| ||||| ||||||||||||||| | |||||||||| ||||||||||| ||||| |||||    
T  14164022 tataacacaaacacttatcatgataa-tccttatgtataagcttacataagatatttttatag 14164083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 18610972 - 18611037
Alignment:
Q  196 cacaagcacttatcatgataagtgcttat--gtataggcttacataagctatttctataggaaaag 259  Q
    ||||||| ||||||||||||| |||||||  ||||| | |||||||| |||| |||||||||||||    
T  18610972 cacaagcgcttatcatgataattgcttatatgtataagattacataatctatatctataggaaaag 18611037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 35070803 - 35070733
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatg-tataggcttacataagctatttctataggaaaag 259  Q
    ||||| ||||||||||| ||||||||||  || ||| |||| ||||||||||||||||| ||||| |||||    
T  35070803 ttatagcacaagcacttgtcatgataagcactaatgctataagcttacataagctatttttatagaaaaag 35070733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 10401174 - 10401141
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtata 229  Q
    |||||||||||||||||||||| |||||||||||    
T  10401174 cacaagcacttatcatgataagcgcttatgtata 10401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 28621206 - 28621153
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgg 320  Q
    ||||||||||||||||||||||| |||| ||| ||||| ||||  |||||||||    
T  28621206 taaagttaaattgtttttgtataagctacaagatgtttacataggctatcttgg 28621153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 2206572 - 2206640
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| |||| ||||| |  ||||| ||||| |||||||||||| |||||  ||||||||||||    
T  2206572 aattgtttttatataagctatgaactgtttacataagctatcttggagagtttatagaattaagctgaa 2206640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 30536705 - 30536661
Alignment:
Q  215 aagtgcttatgtataggcttacataagctatttctataggaaaag 259  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  30536705 aagtgcttatgtataagcttgcataagctatttttatagcaaaag 30536661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 31624088 - 31624140
Alignment:
Q  291 gctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| ||||||||||  ||||||||||||| |||||||| |||| ||||    
T  31624088 gctataagctgttttcataggctatcttggagaaattatgaaaataagttgaa 31624140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 33067156 - 33067188
Alignment:
Q  291 gctataagttgttttcataacctatcttggaga 323  Q
    |||||||||||||||||||| ||||||||||||    
T  33067156 gctataagttgttttcataagctatcttggaga 33067188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 41241313 - 41241152
Alignment:
Q  181 ataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgt 280  Q
    |||||||  ||||| |||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||       | ||||||||||||    
T  41241313 ataaacaacttatagcacaagcacttatcatgatatgcgcttatggataagcttacataagctatttctataggaaaag-ataaaatgaagttaaattgt 41241215  T
Q  281 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||| |||||| |||  ||||||||| || || |||||||||||||||    
T  41241214 ttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaa 41241152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 342
Target Start/End: Original strand, 41851434 - 41851584
Alignment:
Q  191 tatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatat 290  Q
    |||| ||||||| ||||||||| |||  |||||| |||| |||||||  || ||||| |||||||||||       ||||||||||||||||||||||||    
T  41851434 tatagcacaagcgcttatcatgctaaacgcttatatataagcttacacgagatatttatataggaaaagatacaa-taaagttaaattgtttttgtatat 41851532  T
Q  291 gctataagttgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  41851533 gctataagttgttttcagaagctatcttggagaatttatgaaattaagctga 41851584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 201 - 343
Target Start/End: Complemental strand, 12464634 - 12464493
Alignment:
Q  201 gcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagtt 300  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||||       |||||||||||||||||||||||||||||||| |    
T  12464634 gcacttatcatgataagtgcatatgtagaagcttacataagctatttctgtagaaaaagataaaa-taaagttaaattgtttttgtatatgctataagct 12464536  T
Q  301 gttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
     ||||||||| ||||||||||||| || ||||| |||||||||    
T  12464535 attttcataagctatcttggagaacttgtgaaaataagctgaa 12464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 33319985 - 33319832
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||| |||||| ||||||  ||||||||| | | |||||||| |||||| ||||| ||| |        ||||||||| ||||||||||||    
T  33319985 ttatagcacaagcgcttatcctgataatcgcttatgtaaaagtttacataaactatttttatagtaaatgataacataaaagttaaactgtttttgtata 33319886  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    | ||||||  ||||||||||| ||||||||||||| |||||||| |||||||||    
T  33319885 tactataaactgttttcataaactatcttggagaacttatgaaaataagctgaa 33319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 209 - 343
Target Start/End: Original strand, 45229429 - 45229561
Alignment:
Q  209 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 308  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||| |       | | ||||||||||||||||||||| ||| | ||||||||||    
T  45229429 catgataagtgcttatgtataagtttacataagctatttctatagcaaacgataaaa-tgaggttaaattgtttttgtatatgttatca-ttgttttcat 45229526  T
Q  309 aacctatcttggagaatttatgaaattaagctgaa 343  Q
    || ||||||| ||||| |||||||| |||||||||    
T  45229527 aagctatcttcgagaacttatgaaaataagctgaa 45229561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 41407199 - 41407319
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattg-tttttgtat 288  Q
    ||||| ||||||| ||||||||||||||  |||||||||| ||||||||||||||||||| ||  |||||       ||||||||||||| |||||||||    
T  41407199 ttatagcacaagcgcttatcatgataagcacttatgtataagcttacataagctatttctgtaccaaaag-ataaaataaagttaaattgttttttgtat 41407297  T
Q  289 atgctataagttgttttcataa 310  Q
    |||||||||||| |||| ||||    
T  41407298 atgctataagttatttttataa 41407319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 42659311 - 42659216
Alignment:
Q  202 cacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataag 298  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||        |||||| |||||||||||||||||||||||||    
T  42659311 cacttatcatgataagcgcttatgtataagcttacataagctatttttat-ggaaaatggtaaaataaagtgaaattgtttttgtatatgctataag 42659216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 338
Target Start/End: Original strand, 32592485 - 32592631
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||| |||||||||| ||||| ||||||||||| |||| ||||| |||||| ||||| |||||       ||| ||||||||| |||||||||    
T  32592485 ttatagcacaaacacttatcattataagcgcttatgtataagcttgcataaactatttttatagaaaaag-ataaaataatgttaaattg-ttttgtata 32592582  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
     ||||||||||||||| |||| | || |||||||| |||||||| ||||    
T  32592583 cgctataagttgtttttataagcaatattggagaacttatgaaaataag 32592631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 1625874 - 1625950
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||| ||| |||| | |||||||    
T  1625874 taaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaa 1625950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 29628830 - 29628763
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||| |||||||| || |||||||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaa 29628763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 424
Target Start/End: Complemental strand, 43279700 - 43279469
Alignment:
Q  189 tttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtat 288  Q
    |||||| | ||||||||||||||| |||| ||| || | || |||| |||||||||||| ||||  |||||       ||| || |||||||||||||||    
T  43279700 tttataactcaagcacttatcatgttaagcgctaatttctaagcttgcataagctatttttatatcaaaagataaaa-taatgtgaaattgtttttgtat 43279602  T
Q  289 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttt- 387  Q
      ||||||||||||||| |||| |||| |||||||| || ||||| |||| ||||      |||||||||| |||||||||||  ||||||||| || |     
T  43279601 --gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaag-cttatgaaaattgtcataagctg-ttttcataaattctc 43279506  T
Q  388 tcccaaacaatgtcacaaatcttatgctagtagataa 424  Q
    ||||||||| | ||||||| |||||||||||||||||    
T  43279505 tcccaaacagtctcacaaaacttatgctagtagataa 43279469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 40279173 - 40279247
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||| ||||| | |||||||||||||||||| |||| |||||||| |||||||| | |||||||    
T  40279173 aagttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaa 40279247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 18066102 - 18066178
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||  |||| |||||||| ||||||||||| ||||||||||||| ||| |||| |||| ||||    
T  18066102 taaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaa 18066178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 26626848 - 26626923
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||| ||||| |||| ||| ||||||||||| |||||||| |||| |||||||| ||| |||||    
T  26626848 aaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaa 26626923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 33941884 - 33941947
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatga 331  Q
    ||||| |||||||||||||||| | ||||| |||||||||||| |||||||||||| |||||||    
T  33941884 aaagtaaaattgtttttgtataagttataacttgttttcataagctatcttggagagtttatga 33941947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 2142627 - 2142701
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatctt-ggagaatttatgaaattaagct 340  Q
    ||||| || ||| |||||||||| ||||||||||||||||||||  |||||| ||||||||||||||| ||||||    
T  2142627 taaagctagattatttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagct 2142701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 1810639 - 1810714
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||||||||||||| | ||| ||||||||| |||| |||||||| ||| ||||||||| |||||||||    
T  1810639 taaatttaaattgtttttgtataagttat-agttgtttttataagctatcttgaagagtttatgaaaataagctgaa 1810714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 11513872 - 11513948
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||||||||||  |||| |||||||||||||||||||| ||||| ||||||| || || || |||||||||    
T  11513872 taaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaa 11513948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 31561935 - 31561863
Alignment:
Q  180 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctata 252  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||  |||| ||||||||||||||| ||||||    
T  31561935 gataaacagcttatagcacaagcgtttatcatgataagcgcttacatataagcttacataagctatatctata 31561863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 11863835 - 11863890
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctat 251  Q
    ||||| ||||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  11863835 cacaaacacttgtcatgataagcgcttatgcataagcttacataagctatttctat 11863890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 343
Target Start/End: Original strand, 26201911 - 26202078
Alignment:
Q  175 tgtttgataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagtta 274  Q
    |||| ||||||||  ||||| ||||||| ||||||||||||||  ||||| |||| |||| |||||||||||| ||||| |||         ||| ||||    
T  26201911 tgttggataaacaccttatagcacaagcgcttatcatgataagcccttatatataagcttgcataagctatttttatagcaaagagataaaataacgtta 26202010  T
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| | | |||  |||||||||||||||| ||||  ||| |||||||| |||||||| |||| ||||    
T  26202011 aattggtctcgta-ctgctataagttgtttttataagatatattggagaacttatgaaaataagttgaa 26202078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 41293323 - 41293264
Alignment:
Q  199 aagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaa 258  Q
    |||||| ||||||||||||||||||||| || ||||||||||| || ||| |||||||||    
T  41293323 aagcacatatcatgataagtgcttatgtttaagcttacataagttacttcgataggaaaa 41293264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 343
Target Start/End: Original strand, 680483 - 680553
Alignment:
Q  273 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| ||||| |||||||| | ||||||||| |||||||| |||| || ||||| |||||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaa 680553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 42868633 - 42868534
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||| |||||||||||| | ||||||| ||| | |||||||||||||||  |||| |||||       |||||||||||||||||||||||    
T  42868633 ttatagcacaagcgcttatcatgataggcgcttatgcataagtttacataagctattttcatagaaaaag-ataaaataaagttaaattgtttttgtata 42868535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 3611200 - 3611273
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    |||||||||||||||||||||||   ||||   |||||||| || ||||||||||||| |||||||| ||||||    
T  3611200 taaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatgaaaataagct 3611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 22971699 - 22971626
Alignment:
Q  180 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    ||||||||  ||||| ||||| || |||| |||||||| |||| |||||| ||||| |||||||||||||||||    
T  22971699 gataaacaacttatagcacaaacatttattatgataagcgcttgtgtataagcttatataagctatttctatag 22971626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 433
Target Start/End: Complemental strand, 31561809 - 31561675
Alignment:
Q  296 aagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttttcccaaac 395  Q
    |||||||||||||||| |||||||||||| |||||||| |||||| ||     |||||||||||  |||||| || | |||||| ||| |||||||||||    
T  31561809 aagttgttttcataacttatcttggagaacttatgaaagtaagcttaa-acaatcttatgaaaaacgtcatatgc-tgttttcaaaag-ttttcccaaac 31561713  T
Q  396 aatgtcacaaatcttatgctagtagataaacttaaata 433  Q
    | | | ||||| |||||| |||||||||| || |||||    
T  31561712 agttttacaaaacttatgttagtagataatctcaaata 31561675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 39073781 - 39073728
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    |||||||||||||||||||||||||||||  |||| |||| |||| ||||||||    
T  39073781 gttaaattgtttttgtatatgctataagtaatttttataagctatattggagaa 39073728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 41407049 - 41407098
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatc 316  Q
    |||||||||| || |||||||||| ||||||||||||||||||| |||||    
T  41407049 taaagttaaactgcttttgtatattctataagttgttttcataagctatc 41407098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 43199889 - 43199852
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttt 304  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43199889 taaagttaaattgtttttgtataagctataagttgttt 43199852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 12313269 - 12313193
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| ||||||| || |||| || |||||| ||||| ||||||||||||  |||||||| |||| ||||    
T  12313269 taaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaa 12313193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 33931657 - 33931609
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||    
T  33931657 attgtttttgtataagctataagctgttttcataagctattttggagaa 33931609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 42457922 - 42457998
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||| || ||| | || ||| ||||||| ||||||| |||||  ||||||| |||||||||    
T  42457922 taaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaataagctgaa 42457998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 310
Target Start/End: Original strand, 10490607 - 10490646
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  10490607 gttaaattgtttctgtatatgctataaggtgttttcataa 10490646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 10494642 - 10494685
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||    
T  10494642 taaagtgaaattgtttttgtttatggtataagttgttttcataa 10494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 11201471 - 11201412
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||||||||| ||||||||||||||  ||  |||| |||||||| ||||||||    
T  11201471 aaattgtttttgtatatactataagttgtttttgtatactatattggagaacttatgaaa 11201412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 20952342 - 20952405
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| |||||||||||||||||||| || | |||| |||||||| |||||||| |||| ||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaa 20952405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 10258575 - 10258625
Alignment:
Q  191 tatatcacaagcacttatcatgataagtgcttatgtataggcttacataag 241  Q
    |||||||||| ||||| |||||| ||||||||||||||| | |||||||||    
T  10258575 tatatcacaaacacttctcatgacaagtgcttatgtataaggttacataag 10258625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 36114619 - 36114581
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgtttt 305  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  36114619 taaagttaaattgtttttgtataagcaataagttgtttt 36114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 40279263 - 40279317
Alignment:
Q  289 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| | |||||||    
T  40279263 atgccataagttgttttcataagctatattggagaacttatgaaaattagctgaa 40279317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 40279333 - 40279387
Alignment:
Q  289 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| | |||||||    
T  40279333 atgccataagttgttttcataagctatattggagaacttatgaaaattagctgaa 40279387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 40279403 - 40279457
Alignment:
Q  289 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| |||| ||||    
T  40279403 atgccataagttgttttcataagctatattggagaacttatgaaaataagttgaa 40279457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 451
Target Start/End: Complemental strand, 40400892 - 40400815
Alignment:
Q  374 ttttcataagtttttcccaaacaatgtcacaaatctt-atgctagtagataaacttaaataggctaatccaaacaggct 451  Q
    ||||||||||||||| | |||||||||||||| |||| |||  ||||||||  |||||||| || ||||||||||||||    
T  40400892 ttttcataagttttttc-aaacaatgtcacaagtctttatgtcagtagataggcttaaataagccaatccaaacaggct 40400815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 41812237 - 41812120
Alignment:
Q  215 aagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataaccta 314  Q
    ||||| ||||||||| ||||||||||||||||| ||| || |||        | |||||||||||||||||||||||||| ||| || ||||| || |||    
T  41812237 aagtgattatgtataagcttacataagctatttttat-ggcaaatggtaaaatgaagttaaattgtttttgtatatgctacaagatg-tttcaaaagcta 41812140  T
Q  315 tcttggagaatttatgaaat 334  Q
    ||||||| || ||| |||||    
T  41812139 tcttggaaaacttaggaaat 41812120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 43199388 - 43199442
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgga 321  Q
    |||||||||||| | || ||||| |||||||||||||||||||| ||||| ||||    
T  43199388 taaagttaaattatcttcgtataagctataagttgttttcataaactatcctgga 43199442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 43985073 - 43985023
Alignment:
Q  293 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| |||||||| |||  |||||||| |||||||||    
T  43985073 tataagttgttttcataagctatcttgaagagcttatgaaaataagctgaa 43985023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 449903 - 449998
Alignment:
Q  350 cttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaaca 447  Q
    |||||||||| |||||||||||  |||||| ||||  | |||||||||| ||| ||| ||||||||||||||||| || ||||| | |||| ||||||    
T  449903 cttatgaaaaatgtcataagctg-ttttcaaaagtcct-cccaaacaatctcataaaacttatgctagtagataagctcaaataagttaatgcaaaca 449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 5759660 - 5759595
Alignment:
Q  278 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| |||||||||||||| ||||||||||| ||||  |||||  ||| ||||| |||||||||    
T  5759660 tgttttcgtatatgctataagctgttttcataagctattctggagggtttgtgaaaataagctgaa 5759595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 8017409 - 8017474
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||| ||||  |||| ||| |||  ||||||||||| ||||||||||||| ||||||||    
T  8017409 aaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaa 8017474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 9750920 - 9750961
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcat 308  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  9750920 taaagttaaattgttttcttataagctataagttgttttcat 9750961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 15757755 - 15757706
Alignment:
Q  267 taaagttaaattgttttt-gtatatgctataagttgttttcataacctat 315  Q
    |||||||||||||||||| |||||||||||||||||| || |||| ||||    
T  15757755 taaagttaaattgttttttgtatatgctataagttgtatttataagctat 15757706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 36114393 - 36114466
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||||||||  |||| || | | |||||||| ||||||||||||  |||| ||| ||||||    
T  36114393 taaagttaaattgtttttgtattagctaaaaataggtttcataagctatcttggagatcttataaaaataagct 36114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 39659601 - 39659540
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaa 332  Q
    |||||||||||||||| |||| ||||| ||||||| |||| |||| || ||||| |||||||    
T  39659601 gttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaa 39659540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 41796073 - 41796118
Alignment:
Q  62 ctctatttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    |||| ||||||||||||||||||||| |||||| |||||| |||||    
T  41796073 ctctgtttggtaaaaatagcagatagctgataagttagctgatagc 41796118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 43911094 - 43911041
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgga 321  Q
    |||||||||||||||  ||||| || |||||||||||||| || ||||||||||    
T  43911094 aaagttaaattgtttccgtataagccataagttgttttcaaaagctatcttgga 43911041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 4026791 - 4026867
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| |||||| |||   |||||| |||||||||||  |||| || |||| |||||||| |||||||||    
T  4026791 taaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatgaaaataagctgaa 4026867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 12289775 - 12289847
Alignment:
Q  272 ttaaattgtttttg-tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||| || ||| ||||||||||||| ||||  ||| |||||||| |||||||| |||| ||||    
T  12289775 ttaaattgtttttggtacatgttataagttgtttttataatttatattggagaacttatgaaaataagttgaa 12289847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 25800810 - 25800862
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatt 326  Q
    ||||||||||  |||| |||||||| ||||||||||| |||||||| ||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctatcttgaagaatt 25800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 26143708 - 26143660
Alignment:
Q  295 taagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||| ||| ||||||||| |||||||| |||||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaa 26143660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 29316867 - 29316795
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||   |||  ||||||| ||||||||| | ||||||||||||| ||||| || |||||||||    
T  29316867 gttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaa 29316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 42907333 - 42907373
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttca 307  Q
    ||||||||||||||||| || || |||||||||||||||||    
T  42907333 taaagttaaattgttttcgtttaagctataagttgttttca 42907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 44439456 - 44439408
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctat 315  Q
    |||||||||| |||||||||||| ||||||| ||||||| |||| ||||    
T  44439456 taaagttaaactgtttttgtataagctataaattgtttttataagctat 44439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 196 - 343
Target Start/End: Complemental strand, 53789627 - 53789481
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctat 295  Q
    ||||||| ||||||||||||||  ||||||| || |||||||||||||||||||||||||||||       |||| ||||| |||||| |||||||||||    
T  53789627 cacaagcgcttatcatgataagcacttatgtgtaagcttacataagctatttctataggaaaagatgaac-taaaattaaaatgttttggtatatgctat 53789529  T
Q  296 aagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  53789528 aagttgttatcataagctatcatggagaacttatgaaattaagctgaa 53789481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 35959628 - 35959476
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||| |||||       |||||||||||| ||||||||||    
T  35959628 ttatatcacaagctcttatcatgataagagcttatgtataagctcacataagctatttctatag-aaaaggataaaataaagttaaattatttttgtata 35959530  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||  |||| |||| || |||||||| ||||| |||||||||    
T  35959529 tgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaa 35959476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 190 - 330
Target Start/End: Complemental strand, 30956798 - 30956659
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||  ||||||||||||||   ||||| ||| ||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  30956798 ttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtata 30956700  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatg 330  Q
     ||||||||||||||||| || ||||||||||||| |||||    
T  30956699 ggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 190 - 330
Target Start/End: Complemental strand, 30972610 - 30972471
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||  ||||||||||||||   ||||| ||| ||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  30972610 ttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtata 30972512  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatg 330  Q
     ||||||||||||||||| || ||||||||||||| |||||    
T  30972511 ggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 340
Target Start/End: Original strand, 583958 - 584093
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    |||||| ||||||||||||| ||||| ||||||||||| ||||||||||| ||||        ||||||||||||||||||||  ||||||||||||  |    
T  583958 cttatcgtgataagtgcttacgtataagcttacataagttatttctatag-aaaatgataaaataaagttaaattgtttttgttcatgctataagttagt 584056  T
Q  304 ttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||| |||||||| |||| |||||||||||||||    
T  584057 ttcataagctatcttgaagaacttatgaaattaagct 584093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 20880371 - 20880523
Alignment:
Q  186 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 285  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| |         |||||||||||||||||    
T  20880371 cagtttatagcacaagcggttatcataataagtgcttatgtataagcttacataagctatttttatagcaaatgataaaac--aagttaaattgtttttg 20880468  T
Q  286 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||  |||||| | || |||| |||||||| |||||||| ||||||    
T  20880469 tatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagct 20880523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 343
Target Start/End: Complemental strand, 3845738 - 3845582
Alignment:
Q  186 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 285  Q
    ||||| ||| |||||||||||||  | |||||||||| |||||| |||||||||||||||||||||||  ||||       | ||||| || |||||||     
T  3845738 cagttcatagcacaagcacttattgtaataagtgcttttgtataagcttacataagctatttctatagagaaagataaaatt-aagttgaaatgtttttc 3845640  T
Q  286 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| | | |||||||||||  |||||||||||| |||||||| |||||||||    
T  3845639 tatatgctacatgctgttttcataagttatcttggagaacttatgaaaataagctgaa 3845582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 340
Target Start/End: Complemental strand, 18405975 - 18405854
Alignment:
Q  219 gcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagtt-aaattgtttttgtatatgctataagttgttttcataacctatct 317  Q
    ||||||||||| ||||||||||| ||||| |||||||||||       ||  ||| || || ||||||||||||||||||||||||||||||| ||||||    
T  18405975 gcttatgtataagcttacataagttatttatataggaaaag-ataaaatatcgttgaatttttttttgtatatgctataagttgttttcataagctatct 18405877  T
Q  318 tggagaatttatgaaattaagct 340  Q
    ||||||| |||||||||||||||    
T  18405876 tggagaacttatgaaattaagct 18405854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 267 - 445
Target Start/End: Original strand, 21367641 - 21367816
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcat 366  Q
    ||||||||||||||||| |||||   |||||||||||||||||| ||||||||||||| |||||||| |||||||||      ||| |||| | ||||||    
T  21367641 taaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaa-aacagcttgtgaacaatgtcat 21367739  T
Q  367 aagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaa 445  Q
    |||| | |||||||||| || ||||||||| |  |||||| |||||||| |||||||| || ||||| || ||||||||    
T  21367740 aagc-tgttttcataag-ttctcccaaacagtcccacaaaacttatgctggtagataatctcaaataagccaatccaaa 21367816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 30443869 - 30443943
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| |||||||||||||||||| |||||| |||| |||| |||||||| |||||||| |||||||||    
T  30443869 aagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaa 30443943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 14145886 - 14145959
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||  | |||||||| ||||||    
T  14145886 taaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 36631147 - 36631075
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    ||||||||||||||||||||| ||||||||||||||||| || | |||| |||||||| |||||||| |||||    
T  36631147 taaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagc 36631075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 47132310 - 47132381
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||||| |||||||| |||| |||| |||||||| |||||||| |||| ||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaa 47132381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 46778284 - 46778211
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| ||||||||||  ||||||||||| |||||||||| || |||||||| |||||||||    
T  46778284 aagttaaattgtttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaa-taagctgaa 46778211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 448
Target Start/End: Original strand, 39980707 - 39980881
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagc 370  Q
    ||||||||||||||| | ||||||||||||||||| |||| |||| |||||||| |||||||| |||| ||||      |||||||||   |||||||||    
T  39980707 gttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaa-aaaagcttatgaaaccagtcataagc 39980805  T
Q  371 ttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacag 448  Q
     | |||||||||| || ||  ||||| | ||||||| ||||||||||||||||| || ||| | || |||||||||||    
T  39980806 -tgttttcataag-ttctcttaaacagtctcacaaaacttatgctagtagataagctcaaacaagccaatccaaacag 39980881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 44061115 - 44061046
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    |||||||||||||| |||| |||||||||||||||||||   |||||| ||||| |||||||||||||||    
T  44061115 gttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct 44061046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 342
Target Start/End: Original strand, 2719362 - 2719517
Alignment:
Q  185 acagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgttttt 284  Q
    |||| ||||| ||||| | ||||||||||||||  |||| | ||| ||||||| |||||||||||| || ||||        |||||| ||||||||||     
T  2719362 acagcttatagcacaaacgcttatcatgataagcacttacgcataagcttacacaagctatttctaaagcaaaa-tataaaataaagtgaaattgtttt- 2719459  T
Q  285 gtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    || || |||||||  ||||||||||| ||||||||||||| |||||||| ||||||||    
T  2719460 gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctga 2719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 28622094 - 28622019
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| |||||||||| || |||||||| ||||||||||| ||||||| ||||| |||||||| ||| |||||    
T  28622094 aaagttaagttgtttttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaa 28622019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 12862338 - 12862281
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatg 330  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||    
T  12862338 ttaaattgtttt-gtatatgctataagttgttttcataagctatattggagaacttatg 12862281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 20257509 - 20257547
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgtttt 305  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20257509 taaagttaaattgtttttgtatatgctataagttgtttt 20257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 37689147 - 37689243
Alignment:
Q  206 tatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtttt 305  Q
    |||||||||||||||||| ||||| | | ||||||||||||||||||| |||||       |||||  ||||||||||||||||||||||| ||||||||    
T  37689147 tatcatgataagtgcttacgtataagttcacataagctatttctatagcaaaag-ataaaataaag--aaattgtttttgtatatgctataggttgtttt 37689243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 305
Target Start/End: Original strand, 20170417 - 20170535
Alignment:
Q  186 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 285  Q
    |||||||||||||||   ||| |||||||||| ||||||||||  |||| || ||||||||| ||  | |||||       ||| |||||||||||||||    
T  20170417 cagtttatatcacaactgcttttcatgataagcgcttatgtatcagcttgcacaagctatttttactgcaaaagataaaa-taatgttaaattgtttttg 20170515  T
Q  286 tatatgctataagttgtttt 305  Q
    ||||||||||||||||||||    
T  20170516 tatatgctataagttgtttt 20170535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 22203417 - 22203470
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||    
T  22203417 tttttgtataatctataagttgttttcataagctatcttggagaacttatgaaa 22203470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 46886785 - 46886712
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| |||||||||  |||||||| ||||||||||| ||||||||||||| || ||||| ||| |||||    
T  46886785 agttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaa 46886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 402638 - 402562
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||||||| ||||| | |||||| |||||| |||| |||||||| |||| || |||||||||||||||    
T  402638 taaatttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaa 402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 46778392 - 46778336
Alignment:
Q  197 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    |||| |||||||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  46778392 acaaacacttatcatgataagcgcttatgtatcagcttatataagctatttctatag 46778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 44747487 - 44747428
Alignment:
Q  284 tgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| |||||||| ||||||||||| |||||||||| || |||||||| |||||||||    
T  44747487 tgtataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaa 44747428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 33405263 - 33405197
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||| |||||||  |||| |||||||| ||||||||||| |||||||| |||| ||||||||    
T  33405263 taaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 36189540 - 36189606
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||  ||| |||||||| ||||||||    
T  36189540 taaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatgaaa 36189606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 49034355 - 49034293
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||| || ||||||||||||||||||| |||| |||| |||||||| || |||||    
T  49034355 gttaaattgtttgtgcatatgctataagttgtttttataagctatattggagaacttctgaaa 49034293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 1816557 - 1816633
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||| |||||||||||| | |||||||||||||||||| ||||  ||||||  |||| ||| |||||||||    
T  1816557 taaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaa 1816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 16073134 - 16073066
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    |||||| ||||||||||||| |||||| ||| |||||||  ||||||| |||||| |||||| ||||||    
T  16073134 ttaaatagtttttgtatatgttataagctgtcttcataagttatcttgaagaattgatgaaaataagct 16073066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 25348815 - 25348891
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| ||| |||||||||||| ||||| ||||||||| ||   ||||||||||| ||| ||||||||| ||||    
T  25348815 taaagttatattatttttgtatatgttataatttgttttcaaaagtaatcttggagaacttacgaaattaagttgaa 25348891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 25447340 - 25447288
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||| |||||||||||||||||| |||||||  ||||||||||| ||||||||    
T  25447340 taaacttaaattgtttttgtataagctataaactgttttcataagctatcttg 25447288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 26990571 - 26990511
Alignment:
Q  283 ttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| |||||| ||||||||||| ||| |||||| |||||| |||||||| |||||||||    
T  26990571 ttgtacatgctacaagttgttttcctaagctatctcggagaacttatgaaaataagctgaa 26990511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 31365391 - 31365359
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttt 304  Q
    |||||||||||||||||||||||||||||||||    
T  31365391 ttaaattgtttttgtatatgctataagttgttt 31365359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 35127467 - 35127411
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    ||||||||||||||||||| |||||||||||  | ||||||||  ||||||||||||    
T  35127467 taaagttaaattgtttttgcatatgctataaactattttcatacactatcttggaga 35127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 35127533 - 35127490
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggct 233  Q
    ||||| || |||| ||||||||||||||||||||||||||||||    
T  35127533 ttataccataagctcttatcatgataagtgcttatgtataggct 35127490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 849636 - 849678
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcata 309  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||    
T  849636 taaagttaaattgtttttgaatatgctataaattgttctcata 849678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 11492630 - 11492596
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataa 310  Q
    ||||||||||||||||||||||||||||| |||||    
T  11492630 attgtttttgtatatgctataagttgtttacataa 11492596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 19983693 - 19983747
Alignment:
Q  205 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 259  Q
    |||| |||||||| | ||||||||| ||||||||||| ||||||||||| |||||    
T  19983693 ttattatgataagcgtttatgtataagcttacataagttatttctatagaaaaag 19983747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 31106153 - 31106207
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||||||| |||||||||||| |||||||| ||||| |||  |||||||||||    
T  31106153 aagttaaattatttttgtatatgttataagttattttcgtaatttatcttggaga 31106207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 32095285 - 32095235
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||||||||||||||||||||  |||||||  |||||||||| ||||||||    
T  32095285 aagttaaattgtttttgtataaactataagccgttttcataatctatcttg 32095235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 36887504 - 36887554
Alignment:
Q  293 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| | |||||| |||| |||||||| |||||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaa 36887554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 1508753 - 1508696
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    ||||| ||||||  |||||||||||||| ||||||||||| |||| ||||| ||||||    
T  1508753 ttatagcacaagtgcttatcatgataagcgcttatgtataagcttgcataaactattt 1508696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 21335649 - 21335722
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||| | |||||||||||||| || |||| ||||||||||| ||||  | ||||| |||||||| ||||||    
T  21335649 taaagtttagttgtttttgtatattctgtaagctgttttcataagctatactagagaacttatgaaaataagct 21335722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 39602335 - 39602230
Alignment:
Q  236 cataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaatt 335  Q
    |||||||||||||||||| |||||       |||||||||||||||   ||||| | |||||| ||||||||||| ||||||| ||||| |||||||| |    
T  39602335 cataagctatttctatagaaaaagataaca-taaagttaaattgttgc-gtataagttataagctgttttcataagctatctttgagaacttatgaaaat 39602238  T
Q  336 aagctgaa 343  Q
    ||| ||||    
T  39602237 aagttgaa 39602230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 43526537 - 43526492
Alignment:
Q  62 ctctatttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    |||| ||||||||||||||| |||||||||||| |||||| |||||    
T  43526537 ctctgtttggtaaaaatagcggatagttgataagttagctgatagc 43526492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 450
Target Start/End: Complemental strand, 44014755 - 44014714
Alignment:
Q  409 ttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||||||||||||||||||| ||||| || |||||||||||||    
T  44014755 ttatgctagtagataaactcaaataagccaatccaaacaggc 44014714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 47587451 - 47587496
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataacctatcttgga 321  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||    
T  47587451 attgtttttgtatatgttataagttgtttttataaactatattgga 47587496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 139834 - 139794
Alignment:
Q  201 gcacttatcatgataagtgcttatgtataggcttacataag 241  Q
    ||||||||||||||||| ||||||| ||| |||||||||||    
T  139834 gcacttatcatgataagcgcttatgcataagcttacataag 139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 466107 - 466159
Alignment:
Q  197 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttct 249  Q
    |||||||||||| ||||||||  |||||| ||| |||||||||| ||||||||    
T  466107 acaagcacttattatgataagctcttatgcataagcttacataatctatttct 466159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 19679424 - 19679368
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||| ||| ||||||  |||| ||||||||||||||| |||| ||||||||||||    
T  19679424 taaagtcaaactgttttcttataagctataagttgtttttataaactatcttggaga 19679368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 24627464 - 24627504
Alignment:
Q  67 tttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    ||||||||||||||| ||||||||||||  |||||||||||    
T  24627464 tttggtaaaaatagcggatagttgataagctagcttatagc 24627504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 26878095 - 26878167
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| ||||||   | |||||||||||||||| | |||||||| |||||| |||||| || ||||||    
T  26878095 gttaaattgtgtttgtacgagttataagttgttttcattagctatcttgaagaattaatgaaaatatgctgaa 26878167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 443
Target Start/End: Complemental strand, 31365322 - 31365232
Alignment:
Q  351 ttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatcca 443  Q
    ||||||||| |||||||||| | | |||||||| || ||||||||| |||||||||  |||||| | |||||||||| ||||| || ||||||    
T  31365322 ttatgaaaattgtcataagc-tgtattcataag-ttctcccaaacagtgtcacaaaaattatgccaatagataaactcaaataagccaatcca 31365232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 36507171 - 36507111
Alignment:
Q  283 ttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||| ||||||||  | |||||||| |||| ||||||||||||| ||| |||||||||    
T  36507171 ttgtataagctataagcagctttcataaactattttggagaatttataaaaataagctgaa 36507111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 10639866 - 10640107
Alignment:
Q  205 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttt 304  Q
    |||||| ||||||  |||||||||| |  || ||||||||||||||||| |||||       |||| ||||||||||||||||||||  || ||||||||    
T  10639866 ttatcacgataagcacttatgtataagtctatataagctatttctatagcaaaagataaaattaaa-ttaaattgtttttgtatatgtgatgagttgttt 10639964  T
Q  305 tcataacctatcttggagaatttatgaaattaagct-gaattttttcttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcac 403  Q
     ||||| |||| |||||||| |||||||| |||||| |||      |||||||||| |||||||||||  |||||||||||| | |||||||||| ||||    
T  10639965 acataaactattttggagaacttatgaaaataagctagaaaaag--cttatgaaaaatgtcataagctg-ttttcataagttct-cccaaacaatatcac 10640060  T
Q  404 aaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||| ||||||  |||||||||||| ||||| ||||||||||||||||    
T  10640061 aaaacttatgtcagtagataaactcaaataagctaatccaaacaggc 10640107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 16937975 - 16937800
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagc 370  Q
    ||||||||||||||||||||||||||||||||||| |||  |||| |||||||| ||| |||| |||||||||      |||||||||  ||||||||||    
T  16937975 gttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaa-aaaagcttatgaaatttgtcataagc 16937877  T
Q  371 ttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacagg 449  Q
     | |||||||||||| || ||||||| | ||||||| ||||||||||||||||| || ||||| || ||||||||||||    
T  16937876 -tgttttcataagttctt-ccaaacactctcacaaaacttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 25460990 - 25461141
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| || ||||||||||||||||||| |||||| |||| |||| | |||||||||| | ||| |||||       |||||||  ||||||||||||||    
T  25460990 ttatagcataagcacttatcatgataagagcttatatataagcttgcgtaagctatttttctagcaaaagataaa--taaagttgtattgtttttgtata 25461087  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    || |||||||||||||||||| || | |||||||| | |||||| |||||||||    
T  25461088 tgttataagttgttttcataagctctattggagaactgatgaaaataagctgaa 25461141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 10272525 - 10272451
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||||| ||||| |||||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  10272525 aagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaa 10272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 343
Target Start/End: Complemental strand, 16458143 - 16457999
Alignment:
Q  197 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctata 296  Q
    |||||| |||||| |||||||||||||| |||| |||| |||||||||||| ||||| |||||         || |||||||||||||||||||||||||    
T  16458143 acaagctcttatcctgataagtgcttatatataagcttgcataagctatttttatagcaaaagataaaat--aacttaaattgtttttgtatatgctata 16458046  T
Q  297 agttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| || | |||  |||||||| || ||||| ||| |||||    
T  16458045 agttgtttttatgagctaaattggagaacttgtgaaaataaactgaa 16457999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 324
Target Start/End: Original strand, 31038195 - 31038325
Alignment:
Q  188 gtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta 287  Q
    ||||||| |||| || |||||||||||||||| |||| |||| |||||||||| || ||||||| | |||||       |||| | |||||||||| |||    
T  31038195 gtttatagcacatgcgcttatcatgataagtgattatctataagcttacataatctgtttctatggcaaaaga------taaaataaaattgttttcgta 31038288  T
Q  288 tatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  31038289 tatgctataagttgtttccataaactattttggagaa 31038325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 324
Target Start/End: Original strand, 31047419 - 31047549
Alignment:
Q  188 gtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta 287  Q
    ||||||| |||| || |||||||||||||||| |||| |||| |||||||||| || ||||||| | |||||       |||| | |||||||||| |||    
T  31047419 gtttatagcacatgcgcttatcatgataagtgattatctataagcttacataatctgtttctatggcaaaaga------taaaataaaattgttttcgta 31047512  T
Q  288 tatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  31047513 tatgctataagttgtttccataaactattttggagaa 31047549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 12425545 - 12425621
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||||| |||||||| |||| ||||    
T  12425545 taaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaa 12425621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 31051796 - 31051924
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||  ||||||||||||| || |||| |||| ||||||||||||| ||||||| | |||||       |||| |||||||||||| |||||    
T  31051796 ttatagcacaagtgcttatcatgataaatgattatctataagcttacataagctgtttctatggcaaaaga------taaaattaaattgttttggtata 31051889  T
Q  290 tgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||| | ||| |||| ||||||||    
T  31051890 tgctataagttgtttccgtaaactattttggagaa 31051924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 12554494 - 12554541
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctat 315  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  12554494 aaagttaaattgtttttgtatatgctataagttgtttttataacctat 12554541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 39105440 - 39105511
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||| ||||| |||||||  ||||||||||| ||||||||||||| |||||||| ||||||    
T  39105440 aagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagct 39105511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 32703370 - 32703296
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| ||| |||||  |||||||||||||||||||| |||||| ||||||||||| ||| |||||||||    
T  32703370 taaagttaaattatttctgtat--gctataagttgttttcataagctatctaggagaatttataaaaataagctgaa 32703296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 25461404 - 25461336
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| ||| |||||||  ||||||||||||||||||||| | |||||||||| |||||||||    
T  25461404 aattgtttttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaa 25461336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 29925819 - 29925891
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| ||||| ||||||||||||||| ||||| |||| |||||||| |||||||| |||| ||||    
T  29925819 gttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaa 29925891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 32372522 - 32372655
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||| |||||  ||||| |   |       ||||||| |||||||||||||||    
T  32372522 ttatagcacaagcacttatcatgataagcccttatgtatacacttacataaactattattatagcacctgataaaa-taaagttgaattgtttttgtata 32372620  T
Q  290 tgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||| |||||||| ||  ||||||||||||    
T  32372621 tgctataagctgttttcacaagttatcttggagaa 32372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 17652235 - 17652302
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaat 334  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||| ||| | || |||||||||    
T  17652235 taaagttaaattgcttttgtatatactataagttgttttcataagctatgttgaacaacttatgaaat 17652302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 36318761 - 36318824
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| | | |||||||||||||||| ||||||||||||||||||| || |||||||||    
T  36318761 tttttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaa 36318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 43300865 - 43300928
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||||| |||||||| |||||||||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaa 43300928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 3735648 - 3735594
Alignment:
Q  205 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 259  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||    
T  3735648 ttatcatgataagcgcttatggataagcttacataagctatttctatagcaaaag 3735594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 2568632 - 2568705
Alignment:
Q  268 aaagttaaattgttttt-gtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||  | |||||| ||||||    
T  2568632 aaagttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagct 2568705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 7319188 - 7319123
Alignment:
Q  185 acagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttcta 250  Q
    |||| ||||| ||||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||    
T  7319188 acagcttatagcacaagcgcttatcatgataagcacttatgcataagcttacataagctatttcta 7319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 340
Target Start/End: Complemental strand, 24030574 - 24030424
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaatt-gtttttgtat 288  Q
    ||||| |||||||||||||||||||||||||   |||||| ||| |||||||||||| |||||| ||  |       ||||||||||||  |||||| ||    
T  24030574 ttatagcacaagcacttatcatgataagtgcgcgtgtataagctcacataagctattgctatagcaaccg-ataaaataaagttaaattattttttggat 24030476  T
Q  289 atgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||| ||||||||||||| |||| |||| || || || |||||||| ||||||    
T  24030475 atgttataagttgtttttataagctatattagataacttatgaaaataagct 24030424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 26005410 - 26005349
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctat 251  Q
    ||||| ||||| ||||||| ||||||| |||||||||||| |||| ||||||||||||||||    
T  26005410 ttatagcacaaacacttattatgataattgcttatgtataagcttgcataagctatttctat 26005349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 32942605 - 32942658
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  32942605 tttttttatatgctataagctgttttcataagctatcttggagaacttatgaaa 32942658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 7319380 - 7319456
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||  |||| |||||||  ||||||| ||| ||||||||||||| |||| ||| |||||||||    
T  7319380 taaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaa 7319456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 7674622 - 7674698
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||  |||| || ||||  ||||||||||| |||||||||||||||| ||||| |||||||||    
T  7674622 taaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaa 7674698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 7984967 - 7985019
Alignment:
Q  291 gctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| | ||||||||| |||||||||||||||||||||| |||||||||    
T  7984967 gctataagcttttttcataagctatcttggagaatttatgaaaataagctgaa 7985019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 32009668 - 32009732
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||| ||||||| ||||||||||||||| ||||||| |||| |||| |||||||| ||||||||    
T  32009668 aagttgaattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaa 32009732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 7907868 - 7907931
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| | ||||||||||||| |||| || |||||||||  ||||||||||||||||||    
T  7907868 tttttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaa 7907931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 25461927 - 25461864
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    ||||| ||||||| |||||||||||||||| |||| |||| |||| |||||||||||| |||||    
T  25461927 ttataacacaagcgcttatcatgataagtggttatatataagcttgcataagctatttttatag 25461864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 36325998 - 36326061
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| | ||||||||| |||| ||| ||||||||||||||||||| || |||||||||    
T  36325998 tttttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaa 36326061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 42646891 - 42646954
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaa 332  Q
    |||||||||||||||||| || |||||||| ||||||||||| | ||||||||||  |||||||    
T  42646891 aagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 6587195 - 6587129
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctg 341  Q
    ||||||||| ||||| |||||||||||||||||||| ||||  ||||||| || ||||| |||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctg 6587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 9202844 - 9202770
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctg 341  Q
    |||||||||||||||||  |||| || ||||| |||||||||||  ||||||| |||| |||||||| |||||||    
T  9202844 taaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctg 9202770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 17368652 - 17368726
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||  ||||| || |||||||||    
T  17368652 aagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaa 17368726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 338
Target Start/End: Complemental strand, 25461818 - 25461672
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| |||| || ||| |||||||||||| |||| |||| |||| |||||||||||| ||||| |||||       ||  ||||||||| ||| |||||    
T  25461818 ttataacacaggctcttctcatgataagtggttatatataagcttgcataagctatttttatagcaaaag--ataaatatcgttaaattggtttagtata 25461721  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    || ||||||||||||| |||| || | |||||||| |||| ||| ||||    
T  25461720 tgttataagttgtttttataagctctattggagaacttattaaaataag 25461672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 34102406 - 34102344
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||| ||||||||||||||||||||||||||||| |||| | || |||||||| | ||||||    
T  34102406 gttaatttgtttttgtatatgctataagttgtttttataagccatgttggagaactcatgaaa 34102344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 4014493 - 4014444
Alignment:
Q  294 ataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaa 4014444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 40439121 - 40438983
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctat-aggaaaagnnnnnnntaaagttaaattgtttttgtatatgcta 294  Q
    ||||||| |||||| ||||| |  || ||||||| ||||||||||||||||||||| |  ||||        ||||||||||||| |||| | || | ||    
T  40439121 cacaagcgcttatcttgataggcactcatgtataagcttacataagctatttctattaaaaaaattatgaaataaagttaaattgattttctgtaggtta 40439022  T
Q  295 taagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||| ||||||||| |||||||||||||||  |||||||    
T  40439021 taagctgttttcatgacctatcttggagaacatatgaaa 40438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 1130854 - 1130930
Alignment:
Q  177 tttgataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    |||||||||||  ||||| ||||| || |||| |||||||| |||| |||||| ||||| |||||| ||||||||||    
T  1130854 tttgataaacaacttatagcacaaacatttattatgataagcgcttgtgtataagcttatataagccatttctatag 1130930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 28776978 - 28777038
Alignment:
Q  278 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||||||| | |||||| ||||    
T  28776978 tgttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataag 28777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 34205213 - 34205265
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||||| ||||| ||||| |||| |||||||||||||||||||| ||||||||    
T  34205213 taaagtcaaattatttttatataagctataagttgttttcataagctatcttg 34205265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 36797248 - 36797200
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacat 238  Q
    ||||| |||||||||||||||| |||| |||||||||||| ||||||||    
T  36797248 ttatagcacaagcacttatcattataactgcttatgtataagcttacat 36797200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 443921 - 443964
Alignment:
Q  279 gtttttgtatatgctataagttgttttcataacctatcttggag 322  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||    
T  443921 gtttttgtataagctataagatgttttcataagctatcttggag 443964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 3520360 - 3520399
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcat 308  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  3520360 aagttaaattgtttttggatatactataagttgttttcat 3520399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 34736652 - 34736561
Alignment:
Q  236 cataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttat 329  Q
    |||||||||||||||||| |||||       ||||| |||||| |||||||||| |||||||  |||| |||| | ||||||||||||||||||    
T  34736652 cataagctatttctatagcaaaagagaaa--taaagctaaattatttttgtataagctataaactgttatcattagctatcttggagaatttat 34736561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 318
Target Start/End: Original strand, 5559704 - 5559750
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatctt 318  Q
    |||||||||||| ||||| |||||||||||||||||| | |||||||    
T  5559704 ttaaattgttttagtataagctataagttgttttcattagctatctt 5559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 7319071 - 7319029
Alignment:
Q  300 tgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctga 7319029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 18543282 - 18543217
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| |||| | |||||||||||||||||| ||||| ||||||  |||||||| |||||||||    
T  18543282 ttgtttttatataagatataagttgttttcataagctatcctggagagcttatgaaa-taagctgaa 18543217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 23994802 - 23994736
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||||| | |||||| || |||||||| |||| |||| ||| |||| ||||    
T  23994802 ttgtttttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaa 23994736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 229
Target Start/End: Original strand, 28776892 - 28776922
Alignment:
Q  199 aagcacttatcatgataagtgcttatgtata 229  Q
    |||||||||||||||||||||||||||||||    
T  28776892 aagcacttatcatgataagtgcttatgtata 28776922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 304
Target Start/End: Complemental strand, 29815176 - 29815146
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttt 304  Q
    |||||||||||||||||||||||||||||||    
T  29815176 aaattgtttttgtatatgctataagttgttt 29815146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 35445933 - 35445863
Alignment:
Q  273 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| ||||| | |||||| |||| |  ||| |||||||||||||||||||||| |||| ||||    
T  35445933 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaa 35445863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 344
Target Start/End: Complemental strand, 42582789 - 42582707
Alignment:
Q  267 taaagttaaattgtttttgtatatgctata-----agttgttttcataacctatcttggagaatttatgaaattaagctgaat 344  Q
    |||| ||||||| |||||||||||||||||     || ||||||||||| ||||||||| ||| ||| |||| ||||||||||    
T  42582789 taaatttaaattatttttgtatatgctatagtataagctgttttcataatctatcttggtgaacttacgaaaataagctgaat 42582707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 40426739 - 40426812
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||| |||||||||||||||| |||| |||| ||||| | ||| || |||||||||| ||| |||| ||||||    
T  40426739 taaagctaaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagct 40426812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 41981961 - 41981888
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||| |||| ||||||||||||  ||||||| ||||||||||| |||| || ||||| ||| |||| ||||||    
T  41981961 taaagctaaaatgtttttgtataaactataagctgttttcataaactatttttgagaacttacgaaaataagct 41981888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 1465115 - 1465040
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| | |||||| || |||||||||| |||| |||| ||||||||||| | || ||||| |||||||||    
T  1465115 taaagttaaatcgcttttgtgtaagctataagttatttt-ataagctatcttggaggacttgtgaaaataagctgaa 1465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 2563186 - 2563250
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||| ||||||||||||||| |||||||  | |||||| || |||||||||||| | |||||||    
T  2563186 aagttcaattgtttttgtataagctataaactattttcacaagctatcttggagagtctatgaaa 2563250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 450
Target Start/End: Complemental strand, 7706008 - 7705914
Alignment:
Q  354 tgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    |||||| |||||||||||  |||||||||||| | |||||| |  |||||||| ||||||||||||||||  || ||||| |  |||||||||||||    
T  7706008 tgaaaactgtcataagctg-ttttcataagttct-cccaaagagcgtcacaaaacttatgctagtagatatgctcaaataagtcaatccaaacaggc 7705914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 433
Target Start/End: Original strand, 11064733 - 11064803
Alignment:
Q  361 tgtcataagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaata 433  Q
    ||||||||||| ||||||||||||| | | |||||||| ||||||| |||||| | ||||||||||| |||||    
T  11064733 tgtcataagct-attttcataagttct-ctcaaacaatctcacaaaacttatgttggtagataaactcaaata 11064803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 17652172 - 17652212
Alignment:
Q  211 tgataagtgcttatgtataggcttacataagctatttctat 251  Q
    ||||||||||||| ||||| |||| ||||||||||||||||    
T  17652172 tgataagtgcttaagtatacgctttcataagctatttctat 17652212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 18857496 - 18857440
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||| ||||||||||| ||||  ||||||| ||||||||||| || |||||||||    
T  18857496 taaagtcaaattgtttttctataatctataagctgttttcataagctgtcttggaga 18857440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 36145277 - 36145309
Alignment:
Q  292 ctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||||| |||||||||||||    
T  36145277 ctataagttgttttcataagctatcttggagaa 36145309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 42583123 - 42583199
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| || || |  ||||| |||||||||||  |||| ||||||| |||||||  |||||||||    
T  42583123 taaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaa 42583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 9e-28; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 209 - 450
Target Start/End: Complemental strand, 4970941 - 4970708
Alignment:
Q  209 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 308  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||| |||||       |||| | ||||||||||||||||||||||||||| |||| ||    
T  4970941 catgataagcggttatgtataagcttacataagctatttctatagcaaaaga------taaaataaaattgtttttgtatatgctataagttctttttat 4970848  T
Q  309 aacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcacaaatc 408  Q
    ||  ||| || ||||| |||||||| ||| ||||||||||| || |||||| || |||||| || |||||||||| || ||||||||| | ||||||  |    
T  4970847 aagatatattagagaacttatgaaaataaactgaatttttttttttgaaaattgccataag-ttgttttcataag-ttctcccaaacagtctcacaagac 4970750  T
Q  409 ttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    |||||  |  |||||| || ||||| |  |||||||||||||    
T  4970749 ttatgtcacgagataagctcaaataagtcaatccaaacaggc 4970708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 450
Target Start/End: Complemental strand, 17944439 - 17944259
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcat 366  Q
    ||||||||||||||||||||||||| | ||||||||||||||||  ||||||||| |||||||||||||||||||||      | |||||||||||||||    
T  17944439 taaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaa-aaaagcatatgaaaagtgtcat 17944341  T
Q  367 aagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    |||| | |||| ||||| || ||  ||||| | ||||||| ||||||| ||||||||| |||||||| |  | |||||||||||    
T  17944340 aagc-tgtttttataag-ttgtctgaaacagtctcacaaagcttatgccagtagataagcttaaataagtcactccaaacaggc 17944259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 337
Target Start/End: Complemental strand, 30571084 - 30570957
Alignment:
Q  209 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 308  Q
    |||||||||||| |||||||| |||||||||||||| || |||||  ||||       |||||||||||| ||||||||||||||||||| | |||| ||    
T  30571084 catgataagtgcatatgtataagcttacataagctacttatatagcgaaaggtaaaa-taaagttaaattatttttgtatatgctataagctatttttat 30570986  T
Q  309 aacctatcttggagaatttatgaaattaa 337  Q
    ||||||  |||||||| ||||||||||||    
T  30570985 aacctacattggagaacttatgaaattaa 30570957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 33601505 - 33601390
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcat 366  Q
    |||||||||||| ||||||||| |||||||||||||||| |||| ||||||| ||||| ||||||| ||||||||||      |||||||||||||||||    
T  33601505 taaagttaaattatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaa-aaaagcttatgaaaagtgtcat 33601408  T
Q  367 aagcttattttcataagtt 385  Q
    |||| | ||||||||||||    
T  33601407 aagc-tgttttcataagtt 33601390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 310
Target Start/End: Original strand, 46078051 - 46078166
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg--tatatgct 293  Q
    ||||| ||| |||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||        ||||||||||||||||||  ||||||||    
T  46078051 cacaaacacatatcatgataagcgcttatgtataagcttacataagttatttttatagaaaaagataaaac-aaagttaaattgtttttgtatatatgct 46078149  T
Q  294 ataagttgttttcataa 310  Q
    ||||||||||| |||||    
T  46078150 ataagttgtttacataa 46078166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 46280368 - 46280292
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||||||||||||||||| |||||| |||| |||| |||||||| |||||||| || ||||||    
T  46280368 taaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaa 46280292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 47177611 - 47177683
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||  |||| |||||||| |||||||| || |||||||||||||||||||||| ||||||    
T  47177611 aaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagct 47177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 15309661 - 15309590
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    ||||||||||||||||||||||||| | ||||||||||||||||  ||| | ||||||||||||||| ||||    
T  15309661 taaagttaaattgtttttgtatatgttttaagttgttttcataagttatttcggagaatttatgaaaataag 15309590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 33602117 - 33602005
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagct 371  Q
    ||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||| ||||||| ||||||||||      |||||||||||||||||||||     
T  33602117 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaa-aaaggcttatgaaaagtgtcataagc- 33602021  T
Q  372 tattttcataagtttt 387  Q
    | ||||||||||||||    
T  33602020 tgttttcataagtttt 33602005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 48507698 - 48507773
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctat-cttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||||||||||||  ||||||||||| | || ||| ||||| ||||||||||||||||||    
T  48507698 aagttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaattaagctgaa 48507773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 40252202 - 40252128
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    |||||||||| ||||||||||||| |||||| | |||||||||  |||||||||||| |||||||| ||||||||    
T  40252202 aaagttaaatcgtttttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataagctga 40252128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 40377948 - 40377882
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||| |||||||||||| |  |||||||||||||||||||| |||||||| ||||||||    
T  40377948 taaagttaaattctttttgtatatgttgcaagttgttttcataacctatattggagaacttatgaaa 40377882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 424
Target Start/End: Original strand, 34744010 - 34744156
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttat 374  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||||| |||| ||| ||||  |||      ||| |||||| ||||||||| || |    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaa-aaaagcttgtgaaaattgtcataag-ttct 34744107  T
Q  375 tttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataa 424  Q
    |||||| |||| || ||||||| | |||||||||||||| ||||||||||    
T  34744108 tttcattagttctt-ccaaacagtctcacaaatcttatgttagtagataa 34744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 420342 - 420410
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||| |||| ||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaa 420410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 39907781 - 39907853
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||| |||||||  ||||||||||| ||||||| ||||| | |||||| |||||||||    
T  39907781 gttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaa 39907853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 20269551 - 20269626
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||| ||| |||||||||||||  ||| || | ||||||||||||||||| |||| ||||    
T  20269551 aaagttaaattgtttttgtaaatgttataagttgttttactaagctgtattggagaatttatgaaaataagttgaa 20269626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 12110334 - 12110400
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||| |||||||||| ||||| |||||||| ||||||||||| |||||||| |||| ||||||||    
T  12110334 taaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaa 12110400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 20881730 - 20881656
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||  ||| | |||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  20881730 aagttaaattgtttccgtacaagctataagttgttttcataaactatcttaaagaacttatgaaaataagctgaa 20881656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 343
Target Start/End: Original strand, 39279887 - 39280012
Alignment:
Q  216 agtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctat 315  Q
    |||||||||||||| ||||||||| ||||||||||| | |||||       ||| |||||||||||| |||||||| |||| | || ||||||||  |||    
T  39279887 agtgcttatgtataagcttacata-gctatttctattgcaaaagataaaattaa-gttaaattgtttgtgtatatgttataggctgatttcataaattat 39279984  T
Q  316 cttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| || ||||| |||||||||    
T  39279985 cttggagaacttttgaaaataagctgaa 39280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 20526420 - 20526493
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    |||||||||||| | |||||| |||||||||| ||||||||||| |||| |||||||| | |||||| ||||||    
T  20526420 taaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagct 20526493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 310
Target Start/End: Original strand, 119850 - 119927
Alignment:
Q  232 cttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    ||||||||||||||||||| ||||||||       |||||||||||||||| |||| ||||||||||||||||| ||||    
T  119850 cttacataagctatttctacaggaaaagataaaa-taaagttaaattgtttgtgtaaatgctataagttgtttttataa 119927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 424
Target Start/End: Complemental strand, 19022676 - 19022527
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagct 371  Q
    ||||||||||||  || ||||||||||||||||| |||| |||| |||||||| |||||||| |||| ||||      |||||||||| ||||||||| |    
T  19022676 ttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaa-gacaacttatgaaaattgtcataag-t 19022579  T
Q  372 tattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataa 424  Q
    | |||||||||  || ||||||||||| ||||||| || |||  |||||||||    
T  19022578 tgttttcataa-attctcccaaacaatctcacaaaactcatgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 22283840 - 22283764
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||  |||||||  ||||||||||| | ||||| ||||| ||||| || |||||||||    
T  22283840 taaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaa 22283764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 27863821 - 27863745
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| |||||| | |||||||||||||||||||||||| |||| |||| || ||||| |||||||  |||||||||    
T  27863821 taaagataaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaa 27863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 33678754 - 33678830
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| ||||||||| | |||||||| ||||||||||| |||||||||| || || ||||| |||| ||||    
T  33678754 taaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaa 33678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 43694666 - 43694594
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    |||| ||||||||||||||||||||||||||| |||||| |||| |||| | | |||| |||||||| |||||    
T  43694666 taaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 44821933 - 44822009
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| |||||||||||||||| | |||||| ||||||||||| ||||  ||||||| |||||||| |||| ||||    
T  44821933 taaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaa 44822009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 45790521 - 45790445
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| |||||| | |||| ||||||||||||||| |||| |||| ||||| || |||||||| |||||||||    
T  45790521 taaagttaatttgtttatttataagctataagttgtttttataaactatattggataacttatgaaaataagctgaa 45790445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 45263997 - 45264100
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttct--ataggaaaagnnnnnnntaaagttaaattgtttttgtatatgct 293  Q
    ||||||| |||||||||| ||| ||||| | ||| ||||||||||||||||| |  |||| |||||       |||||||||||||||||||||||||||    
T  45263997 cacaagcgcttatcatgaaaagcgcttacgcataagcttacataagctatttttttatagaaaaagatgaaa-taaagttaaattgtttttgtatatgct 45264095  T
Q  294 ataag 298  Q
    |||||    
T  45264096 ataag 45264100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 48470020 - 48470083
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaa 332  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||| ||| | || |||||||    
T  48470020 aagttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaa 48470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 45806649 - 45806530
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| || ||||||||||||| |||||  |||||||||| |||| |||||||||| | ||||| |||||       ||| |||||||||||||| ||      
T  45806649 ttatagcaaaagcacttatcataataagcacttatgtataagcttgcataagctatgtttatagcaaaag-agaaaataacgttaaattgtttttctaat 45806551  T
Q  290 tgctataagttgttttcataa 310  Q
    |||||||||||||||| ||||    
T  45806550 tgctataagttgtttttataa 45806530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 37064557 - 37064484
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||  |||||||||||| ||||||| ||| |||| || ||| | |||||||| |||||||||    
T  37064557 agttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagctgaa 37064484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 38500094 - 38500033
Alignment:
Q  186 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| | ||||| ||| |||||    
T  38500094 cagtttatagcacaagcgcttatcatgataagcgcttatgtatatgattacagaagttattt 38500033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 38639989 - 38640054
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||||||||| ||||| ||||||||| |||| |||| |||| ||||| || ||||||||    
T  38639989 aaagttaaattgtttttttatatactataagttatttttataagctatattggataagttatgaaa 38640054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 43648225 - 43648290
Alignment:
Q  278 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||||||| |||||| ||||||||||| |||||||||||||  ||||||| |||| ||||    
T  43648225 tgttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaa 43648290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 3308424 - 3308372
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagc 242  Q
    ||||| |||||| |||| |||||||||||||||||||||| | ||||||||||    
T  3308424 ttatagcacaagtacttttcatgataagtgcttatgtataaggttacataagc 3308372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 19302651 - 19302607
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctat 315  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  19302651 gttaaattgtttttgtatatgttataagttgtttttataagctat 19302607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 17248530 - 17248598
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    |||||||||||||||||||||| |||||||| | |||||||||   ||||| ||||| |||||||| ||||    
T  17248530 aaagttaaattgtttttgtataagctataagctcttttcataa--gatcttagagaacttatgaaaataag 17248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 21568786 - 21568731
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 259  Q
    ||||||||||||||  |||||||||| |||| |||||||||||| ||||| |||||    
T  21568786 cttatcatgataagcacttatgtataagcttgcataagctatttttatagcaaaag 21568731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 33673056 - 33673127
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||| | |||||||| |||||||| ||||| ||||| |||| ||||||||||||| |||  ||||||||    
T  33673056 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaacaagctgaa 33673127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 34083621 - 34083578
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  34083621 taaagttaaattgtttgtgtataagctataagctgttttcataa 34083578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 38138651 - 38138499
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||| ||||| |||||||||| | ||||||||| | ||  ||||||||||| ||||| | |||       ||| |||| |||| |||||||||    
T  38138651 ttatagcacaatcacttgtcatgataagagtttatgtataaggttggataagctatttttatagtataagataaag-taacgttacattgattttgtata 38138553  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||| || | |||| |||  ||| |||||||| |||| ||||    
T  38138552 tgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaa 38138499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 45338428 - 45338498
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||||| |||||||||||  ||| |||| |||||||| | |||||| |||| ||||    
T  45338428 ttaaattgtttttgtatatgctgtaagttgtttt-ttaagctatattggagaactgatgaaaataagttgaa 45338498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 5569731 - 5569661
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    |||| ||||||||||| ||||| | ||||||||||||||||||  ||||||| |||| | |||||| ||||    
T  5569731 aaagctaaattgttttggtataagttataagttgttttcataagttatcttgaagaactaatgaaaataag 5569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 13960890 - 13960928
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgtttt 305  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  13960890 taaagttaaattgtttttgtataacctataagttgtttt 13960928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 19718989 - 19719034
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttgga 321  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  19718989 aattgtttttgtaaatgttataagttgttttcataa-ctatcttgga 19719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 20258490 - 20258552
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||||||||  ||||||||||||||||  ||| || | ||||||||| |||||||    
T  20258490 gttaaattgtttttgtaattgctataagttgttttactaagctgtattggagaatatatgaaa 20258552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 30456546 - 30456480
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||| ||||||||||  |||| | ||||||| |||||||||| ||||||||||||  ||||||||    
T  30456546 taaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaa 30456480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 47130855 - 47130805
Alignment:
Q  293 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| ||||||||||||| || ||||| |||| ||||    
T  47130855 tataagttgttttcataagctatcttggagaacttgtgaaaataagttgaa 47130805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 48917414 - 48917368
Alignment:
Q  295 taagttgttttcataacctatcttggagaatttatgaaattaagctg 341  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataagctg 48917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 8960723 - 8960666
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||||||||||| ||| ||| ||||| |||| |||| || |||||    
T  8960723 taaagttaaattgtttttgtatatgttatgagtagtttttataaactatattagagaa 8960666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 20881801 - 20881760
Alignment:
Q  187 agtttatatcacaagcacttatcatgataagtgcttatgtat 228  Q
    |||||||| ||||||||||||||||||||||  |||||||||    
T  20881801 agtttatagcacaagcacttatcatgataagctcttatgtat 20881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 33128661 - 33128718
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    ||||| |||||||||||||||||||||||| ||| |||||| || | ||||| |||||    
T  33128661 cacaaacacttatcatgataagtgcttatgcataagcttacttacgttatttttatag 33128718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 39279738 - 39279791
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgga 321  Q
    |||||||||||| |||||||||| ||||||| || ||||||||  |||||||||    
T  39279738 aaagttaaattgcttttgtatattctataagctggtttcataagttatcttgga 39279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 40689082 - 40689009
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    |||||||||||| ||||  |||| |||||||| ||| ||||||| ||||| |||| || |||||||| ||||||    
T  40689082 taaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagct 40689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 31512067 - 31512035
Alignment:
Q  62 ctctatttggtaaaaatagcagatagttgataa 94  Q
    |||| ||||||||||||||||||||||||||||    
T  31512067 ctctgtttggtaaaaatagcagatagttgataa 31512035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 31744287 - 31744359
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||| ||||||| ||||||  ||| |||| |||| ||| |||| |||||||| |||| ||||    
T  31744287 gttaaattgtttttggatatgctttaagttaattttataaactatattgaagaacttatgaaaataagttgaa 31744359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 31771703 - 31771743
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcata 309  Q
    |||||||| |||||||||||| |||||||| ||||||||||    
T  31771703 aagttaaactgtttttgtataagctataagctgttttcata 31771743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 39967894 - 39967970
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||||||| |||   |||||||||||||||||||| ||||||  ||||| | |||||| |||| ||||    
T  39967894 taaacttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaa 39967970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 50681261 - 50681119
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| |||||| ||||||||||||||| | ||||||||| ||||||| ||||||||| ||||||| |||       ||| |||||||||||||||||||    
T  50681261 ttatagcacaagaacttatcatgataagcgtttatgtataagcttacaaaagctatttttataggataagataaaa-taatgttaaattgtttttgtata 50681163  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||||||  |||| |||| |||||||| ||||||||    
T  50681162 tgctataagttgtttatataagctatattggagaaattatgaaa 50681119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 17822959 - 17822888
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  17822959 aagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagct 17822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 343
Target Start/End: Complemental strand, 55414584 - 55414440
Alignment:
Q  198 caagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataa 297  Q
    ||||| |||| |||||||||| ||||| |||| || | |||||||||||||||| |||||||       ||||||||| || |||||| |||||||||||    
T  55414584 caagcgcttaccatgataagttcttatttataagcgtgcataagctatttctattggaaaagataaaa-taaagttaatttttttttgcatatgctataa 55414486  T
Q  298 gttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
     ||||||||||||  |||||||||||| |||||||| |||| ||||    
T  55414485 attgttttcataagttatcttggagaacttatgaaaataagttgaa 55414440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 450
Target Start/End: Complemental strand, 21731742 - 21731572
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattt 376  Q
    |||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||| |||| ||||     | ||||||||| ||| |||||| | |||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagt-ttatgaaaattgtgataagc-tgttt 21731645  T
Q  377 tcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||||||| || ||||||||||| ||||||| ||||||  ||||||||  || |||||  | |||||||||||||    
T  21731644 tcataag-ttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacaggc 21731572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 22030116 - 22030213
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||||  ||||       |||||||| ||| ||||||||||||||||||||||||    
T  22030116 cttatcatgataagcgcttatgtataagctcacataagctatttctatag--aaaggataaaataaagttatattatttttgtatatgctataagttgtt 22030213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 447
Target Start/End: Original strand, 41336649 - 41336911
Alignment:
Q  180 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattg 279  Q
    ||||||||| ||||| ||||||  ||||| ||||||||  ||||||||||||||| |||||||||||| ||||| |||         |||||||||||||    
T  41336649 gataaacagcttatagcacaagttcttattatgataagcacttatgtataggcttgcataagctatttttatagcaaa--gataaaataaagttaaattg 41336746  T
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttca 379  Q
    |||||||||||| ||||| |||||||  ||| |||   || |||||||| |||| |||| ||||      |||||||||| |||||||||| | |||||     
T  41336747 tttttgtatatgttataaattgtttttctaagctagggtgaagaatttacgaaaataagttgaa-aaaagcttatgaaaactgtcataagc-tgttttct 41336844  T
Q  380 taagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaaca 447  Q
    |||||| || || ||| || ||||||| ||||||  |||||||||||| ||||| |  ||||||||||    
T  41336845 taagttctt-cctaactatctcacaaaacttatgtgagtagataaactcaaataagtcaatccaaaca 41336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 51630085 - 51630161
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||  |||| |||||||| | ||||||||| |||||||| ||||||||||||| |||||||||    
T  51630085 taaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaa 51630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 53294210 - 53294134
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||| || ||||| ||||||||  ||||||||    
T  53294210 taaatttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaa 53294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 16200066 - 16200004
Alignment:
Q  278 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| | |||||||| ||||||    
T  16200066 tgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagct 16200004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 3155577 - 3155653
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||| | |||| ||| ||||||||||| |||||||| |||| | |||||| |||||||||    
T  3155577 taaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataagctgaa 3155653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 17884042 - 17884118
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||| | ||| |||||||||||||| |||| |||||||  |||||||| | |||||||    
T  17884042 taaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaa 17884118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 54392915 - 54392839
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||||||||| || |||||| ||||  |||||||||||| || ||||| |||| ||||    
T  54392915 taaagttaaattgtttttgtatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 54392839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 9760414 - 9760480
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||| |||||  ||||||||||||||||||| |||| |||| |||||||| ||||||||    
T  9760414 taaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaa 9760480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 197 - 333
Target Start/End: Original strand, 17204043 - 17204178
Alignment:
Q  197 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctata 296  Q
    |||||||||||||| |||||  |||||||| |  ||||||||||||| ||| ||||| ||| |       |||||||| ||||||||||||||||||| |    
T  17204043 acaagcacttatcacgataaccgcttatgtgttagcttacataagctgtttttatagcaaatgttaaaa-taaagttatattgtttttgtatatgctaca 17204141  T
Q  297 agttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||  |||||| |  |||||||||||| ||||||||    
T  17204142 agttagtttcattagttatcttggagaacttatgaaa 17204178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 56480322 - 56480388
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||||||| |||||| | |||||| ||||||||||| ||||||||||||  ||||||||    
T  56480322 taaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaa 56480388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 18425711 - 18425843
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| |||||||||||| ||||||||||| ||||||||| | |||||| |||||||| ||| || |||        ||||||||||||||||||||| |    
T  18425711 ttatagcacaagcacttaccatgataagtgattatgtataagattacatgagctattt-tat-ggcaaatggtaaaataaagttaaattgtttttgtaca 18425808  T
Q  290 tgctataagttgttttcataacctatcttggagaa 324  Q
    || |||||  |||||||| || | |||||||||||    
T  18425809 tgttataaaatgttttcaaaagccatcttggagaa 18425843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 24169159 - 24169216
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    ||||||||| ||||||||||||||| || ||||||||||  |||||||||||||||||    
T  24169159 ttatatcaccagcacttatcatgattagcgcttatgtatgagcttacataagctattt 24169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 27043926 - 27043869
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||| ||||| |||||||| |||||| |||| |||||||||||||    
T  27043926 taaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaa 27043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 305
Target Start/End: Complemental strand, 25904386 - 25904268
Alignment:
Q  190 ttatatcacaagcacttatcatgataa----gtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 285  Q
    ||||| |||||||||||||||||||||    ||| |||| |||| ||||||||||||||||| || || |||||       ||||||||||||| |||||    
T  25904386 ttatagcacaagcacttatcatgataagcatgtgattatatataagcttacataagctatttttacagcaaaag-ataaaataaagttaaattgattttg 25904288  T
Q  286 tatatgctataagttgtttt 305  Q
    ||| ||||||||| ||||||    
T  25904287 tatttgctataagctgtttt 25904268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 29912847 - 29912998
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| || ||||| ||||||| |||||  ||| ||||||  ||||||| |||||||||||||| ||||        |||||| |||||||||| |||||    
T  29912847 ttatagcataagcagttatcataataagcacttttgtatacacttacatcagctatttctatagcaaaa-aataaaataaagtaaaattgtttt-gtata 29912944  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    || || |||| |||||||||| |||||||||| || |||| ||| |||||||||    
T  29912945 tgttaaaagtcgttttcataagctatcttggacaacttataaaaataagctgaa 29912998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 450
Target Start/End: Original strand, 54426036 - 54426197
Alignment:
Q  286 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtt 385  Q
    |||||| ||||||||||||| |||| |||| |||||||| |||||||| |||  ||||      |||||||||| |||||||||||  ||||| ||||||    
T  54426036 tatatgttataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaag-cttatgaaaattgtcataagctg-ttttcctaagtt 54426133  T
Q  386 tttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
     | ||||| || | ||||||| ||||||| ||||||||| || ||||| || |||||||||||||    
T  54426134 ct-cccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 437340 - 437265
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    |||||||||||| |||||| || || ||| || |||||| |||| |||| ||||||||||||||||| ||||||||    
T  437340 taaagttaaattatttttgcatgtgttatgagctgtttttataaactatattggagaatttatgaaaataagctga 437265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 448
Target Start/End: Complemental strand, 35571725 - 35571549
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataa 368  Q
    |||||| |||||||| ||||| |||||||| ||||||||||| ||||||| ||||| || ||||| |||| ||||      || ||||| ||||| ||||    
T  35571725 aagttatattgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaa-accagctcatgaacagtgtaataa 35571627  T
Q  369 gcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacag 448  Q
    || | |||| | ||| || |||||||| ||  |||||| ||||||||||||||||| || ||||| || |||||||||||    
T  35571626 gc-tgtttttaaaag-ttctcccaaactatcccacaaaacttatgctagtagataagctcaaataagccaatccaaacag 35571549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 42685400 - 42685455
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    |||||||||||||||| |||| ||| |||||||||||||||| |||| ||||||||    
T  42685400 aagttaaattgtttttttataagctctaagttgttttcataagctattttggagaa 42685455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 47119060 - 47118985
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||  |||| |||||||||||| ||||||  |||||||| |||| |||||||  |||||||||    
T  47119060 aaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaa 47118985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 7694104 - 7694030
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||| |||||||||||| |||||||| |||||||||||  |||| |||||| |||||| || |||||||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaa 7694030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 8422926 - 8422860
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    ||||||||  |||| ||||||||||||||||| || |||||||||||| |||||| || ||||||||    
T  8422926 attgttttcatataagctataagttgttttcacaatctatcttggagagtttatgcaaataagctga 8422860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 42121472 - 42121538
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| |||||| |||||||||||||||||| | ||||||||||||| || || || |||||||||    
T  42121472 ttgtttctgtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaa 42121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 1407933 - 1408006
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| || |||  ||| ||||||||||| |||||| ||| ||||||||||  |||||||||    
T  1407933 agttaaattgtttttgtgtaagctgcaagctgttttcataagctatctaggaaaatttatgaagataagctgaa 1408006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 2996554 - 2996603
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    ||||||||||| |||| | |||||||||||||||||| ||||||||||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggaga 2996603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 19395205 - 19395136
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||| |||||||  ||||||||| | ||||||||||||||| ||  || |||||||||    
T  19395205 aaattgtttttgtataagctataaaatgttttcattagctatcttggagaattgattgaaataagctgaa 19395136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 23277311 - 23277360
Alignment:
Q  180 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtata 229  Q
    ||||||||| ||||| ||||||||||||| |||||||| |||||||||||    
T  23277311 gataaacagcttatagcacaagcacttataatgataagagcttatgtata 23277360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 52707572 - 52707617
Alignment:
Q  62 ctctatttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||    
T  52707572 ctctatttggtaaaaatagcggatagctgataagttagcttatagc 52707617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 55064809 - 55064885
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataa--cctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| ||||||||| | |||||||||||    |||||||||||| |||||||| |||| ||||    
T  55064809 aagttaaattgtttttgtgtatgctatatgctgttttcataaatgttatcttggagaacttatgaaaataagatgaa 55064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 25885833 - 25885885
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    ||||||||||||||||| || || ||||||||||||||||||||  |||||||    
T  25885833 taaagttaaattgttttcgtgtaagctataagttgttttcataagttatcttg 25885885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 28300395 - 28300319
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||| |||||||  | ||||||||  |||||||| |||  |||||||| |||| ||||    
T  28300395 taaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaa 28300319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 29388592 - 29388664
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| |||  |||||| ||||| |||| ||||  |||||||||||||||| |||| ||||    
T  29388592 gttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataagttgaa 29388664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 30668433 - 30668360
Alignment:
Q  296 aagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagct 371  Q
    |||||||||| |||| |||||||||| | |||||||||||||||||||      ||||||||||||||||||||||    
T  30668433 aagttgtttttataagctatcttggatagtttatgaaattaagctgaa--aaagcttatgaaaagtgtcataagct 30668360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 35064829 - 35064905
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| |||| |||||||||||| |||||| | |||||||||||  |||| |||||| |||||| || |||||||||    
T  35064829 taaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaa 35064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 44138533 - 44138609
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||| ||| |||||  || ||| |||||||||||| | || |||||||| |||||||| |||||||||    
T  44138533 taaagttaaattgctttcgtatagcctgtaatttgttttcataaaccatgttggagaacttatgaaaataagctgaa 44138609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 52746936 - 52746884
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||||||||||||||||||| || || ||||| ||||||||||| ||||||||    
T  52746936 taaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttg 52746884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 16494888 - 16494845
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||    
T  16494888 tttttttataagctataagttgttttcataagctatcttggaga 16494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 41512633 - 41512696
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    |||||||||||  ||||||||||||||||||||||| || ||| | |||| |||||||| ||||    
T  41512633 aattgtttttgcgtatgctataagttgttttcataagctttctggaagaacttatgaaaataag 41512696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 49939965 - 49939884
Alignment:
Q  350 cttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaata 433  Q
    |||||||| | |||||||||||  |||||||||||| |||| ||| | | ||||||| ||||||||||||||||| ||||||||    
T  49939965 cttatgaacaatgtcataagctc-ttttcataagttcttcc-aaatagtctcacaaagcttatgctagtagataagcttaaata 49939884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 49940078 - 49940023
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataacctatcttggagaatttatga 331  Q
    |||||||| ||||| ||||| || ||||||||||| ||||||||||| ||||||||    
T  49940078 attgttttcgtataagctattagctgttttcataagctatcttggagcatttatga 49940023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 310
Target Start/End: Complemental strand, 54069509 - 54069470
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  54069509 gttaaattgtttttgtatatgctataatttgtttttataa 54069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 55437155 - 55437229
Alignment:
Q  374 ttttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacagg 449  Q
    |||||||||||| || | ||||||| ||||||| ||||||  |||||||||||| ||||| || ||||||||||||    
T  55437155 ttttcataagttctttc-aaacaatttcacaaaacttatggcagtagataaactcaaataagccaatccaaacagg 55437229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 7601733 - 7601799
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||||||||||||||||| ||| ||| ||||| |||| |||| || ||||| ||| ||||    
T  7601733 taaagttaaattgtttttgtatatgttatgagtagtttttataaactatattagagaacttaagaaa 7601799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 13126694 - 13126629
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| ||||||||||| | ||||||||| |||| |||| ||| |||||||| |||||||||    
T  13126694 ttgtttttgt-tatgctataaggtattttcataagctatgttggtgaacttatgaaaataagctgaa 13126629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 39691225 - 39691163
Alignment:
Q  281 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||||| |||| |||| ||| |||| ||| |||| |||| ||||    
T  39691225 ttttgtatatgctataagttgtttttataagctatattgaagaacttacgaaaataagttgaa 39691163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 2466005 - 2465972
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataa 310  Q
    ||||||||||||| ||||||||||||||||||||    
T  2466005 ttgtttttgtataagctataagttgttttcataa 2465972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 7839450 - 7839381
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||||||| ||||||| |||| |||  ||| |||| ||| |||| |||| ||||    
T  7839450 aaattgtttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaa 7839381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 21731823 - 21731782
Alignment:
Q  182 taaacagtttatatcacaagcacttatcatgataagtgctta 223  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  21731823 taaacagcttatagcacaagcgcttatcatgataagtgctta 21731782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 31076531 - 31076425
Alignment:
Q  217 gtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatc 316  Q
    ||||||||||||| |||| |||||||||||| || || |||||       |||  ||||| |||||||||||||||||||| ||||||| |||| ||||     
T  31076531 gtgcttatgtataagcttgcataagctatttttagagcaaaagataaaa-taagtttaaactgtttttgtatatgctataaattgtttttataagctata 31076433  T
Q  317 ttggagaa 324  Q
    ||| ||||    
T  31076432 ttgaagaa 31076425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 2111121 - 2111073
Alignment:
Q  292 ctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||||| |||||||| || | |||||||| ||||||    
T  2111121 ctataagttgttttcataagctatcttgaaggacttatgaaaataagct 2111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 23277405 - 23277441
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataa 310  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  23277405 aaattgtttttttatatgttataagttgttttcataa 23277441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 28615413 - 28615486
Alignment:
Q  374 ttttcataagtttttcccaaacaatgtcacaaatctt-atgctagtagataaacttaaataggctaatccaaacag 448  Q
    |||||||||||| |  ||||||||| |||||| | || ||||||||||||||||||||||| |  |||||||||||    
T  28615413 ttttcataagttct--ccaaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaacag 28615486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 43505871 - 43505923
Alignment:
Q  207 atcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 259  Q
    |||||||||||  |||||||||| |||| |||||||||||| ||||| |||||    
T  43505871 atcatgataagcacttatgtataagcttgcataagctatttttatagcaaaag 43505923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 44249295 - 44249335
Alignment:
Q  303 tttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| |||||||||||| ||||||||| |||||||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaa 44249335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 47946174 - 47946214
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcata 309  Q
    ||||||||||||||| ||||| ||||||| |||||||||||    
T  47946174 aagttaaattgttttcgtataagctataaattgttttcata 47946214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 49202627 - 49202695
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||  ||||| |||||||||||||||| ||| |||||||||| || | |||||| |||| ||||    
T  49202627 aattgtttcggtataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaa 49202695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 49219113 - 49219189
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||||| ||||  |||| |||||||||||||||||||| |||||||  |||  ||||| || |||||||||    
T  49219113 taaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaa 49219189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 50004240 - 50004164
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||  ||||  | || || ||||||| |||  |||||||||||| |||||||| |||||||||    
T  50004240 taaagttaaattgttttcatataaacaatgagctgttttcctaagttatcttggagaacttatgaaaataagctgaa 50004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 50662818 - 50662758
Alignment:
Q  283 ttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||  |||| |||| |||||||| || ||||| |||| ||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaa 50662758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 27976511 - 27976626
Alignment:
Q  208 tcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttca 307  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||| ||| |        ||||||||||||||||||||||||||||||||||||||||    
T  27976511 tcatgataagtccttatgtataagcttacataagctatttttatagcaaatgattgaac-aaagttaaattgtttttgtatatgctataagttgttttca 27976609  T
Q  308 taacctatcttggagaa 324  Q
    ||| ||||||| |||||    
T  27976610 taagctatcttcgagaa 27976626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 343
Target Start/End: Original strand, 51688617 - 51688754
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    |||||||||||||||| |||| |||| |||||||| |||||||| | |||||||||       ||||| ||||||||||||||| |||||||||||||||    
T  51688617 cttatcatgataagtgtttatatataagcttacatgagctatttatgtaggaaaagataaaa-taaagataaattgtttttgtacatgctataagttgtt 51688715  T
Q  304 ttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||| ||| ||||| ||||| | ||||||||||||||||||    
T  51688716 ttcgtaagctatcgtggag-acttatgaaattaagctgaa 51688754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 450
Target Start/End: Original strand, 2295016 - 2295250
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||        ||| ||||||||||||||||||||||   || | ||    
T  2295016 cttatcatgataagtgcttatgcataagcttacataagctatttctatagaaaaagcc------aaaattaaattgtttttgtatatgct---agctatt 2295106  T
Q  304 ttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcac 403  Q
    || |||| |||| |  ||||| || ||||| |||| |||| |    |||||||||| |||||||||| | |||||||||| || ||||||||| | ||||    
T  2295107 tttataagctatatcagagaacttgtgaaaataagttgaa-tagagcttatgaaaattgtcataagc-tgttttcataag-ttctcccaaacagtctcac 2295203  T
Q  404 aaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||| ||||||| ||||||||| || ||||| || ||| |||||||||    
T  2295204 aaaacttatgccagtagataagctcaaataagccaattcaaacaggc 2295250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 41195366 - 41195213
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||| |||||| ||||||  ||||||||||| | |||||||| |||||| ||||| ||| |        ||||||||| ||||||||||||    
T  41195366 ttatagcacaagcgcttatcctgataatcgcttatgtataagtttacataaactatttttatagtaaatgataacataaaagttaaactgtttttgtata 41195267  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    | |||| |  ||||||||||| ||||||||||||| |||||||| |||||||||    
T  41195266 tactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaa 41195213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 24915186 - 24915071
Alignment:
Q  227 ataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatt 326  Q
    |||||||||||||| |||||||||||| | |||       |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| |    
T  24915186 ataggcttacataaactatttctatagcagaagataaaa-taaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaact 24915088  T
Q  327 tatgaaattaagctgaa 343  Q
    | ||||| |||| ||||    
T  24915087 tgtgaaaataagttgaa 24915071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 270 - 390
Target Start/End: Original strand, 1432492 - 1432610
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataag 369  Q
    |||| |||||||||| |||| ||||||| |||||||||||| ||||||||||||| |||||||| |||||| || | | ||||||||| | ||||||| |    
T  1432492 agttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagct-aagtatgtcttatgaacaatgtcatacg 1432590  T
Q  370 cttattttcataagtttttcc 390  Q
    | |||||||||||||| ||||    
T  1432591 c-tattttcataagttcttcc 1432610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 41505585 - 41505717
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||| | ||||| |||||||||||||||| || |||||||||||||||||| ||||| ||| |       ||||||||||||||||| |||||    
T  41505585 ttatagcacaaacgcttatgatgataagtgcttatgcattggcttacataagctatttttatagaaaacg--taaattaaagttaaattgttttcgtata 41505682  T
Q  290 tgctataagttgttttcataacctatcttggagaa 324  Q
    || |||||| |||||| |||| |||| ||||||||    
T  41505683 tgttataagctgtttttataagctatattggagaa 41505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 3234107 - 3234040
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||| ||||    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataag 3234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 7218170 - 7218094
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||||||||||  |||| |||||||||||||||||||||||||| ||||||| |||||||| |||| ||||    
T  7218170 taaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaa 7218094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 27820433 - 27820357
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||| |||||||||| |||||| |||||| | |||||| |||| |||||||||||||||||||||| |||||||||    
T  27820433 taaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaa 27820357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 190 - 450
Target Start/End: Complemental strand, 14576825 - 14576570
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||| ||||||||||||||  ||||| |||| ||| |  ||||||||||| |||| ||| |       |||||||||||||||||||||||    
T  14576825 ttatagcacaagctcttatcatgataagcacttatttataagctcatgtaagctatttccatagtaaa-ggataaaataaagttaaattgtttttgtata 14576727  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttttc 389  Q
    |||||||| || |||| |||| |||| || ||||| || ||||| |||||||||      ||| |||||| |||||||||| | |||||| ||| || ||    
T  14576726 tgctataatttttttttataagctatattagagaactt-tgaaaataagctgaa-aaaagcttttgaaaattgtcataagc-tgttttcacaag-ttgtc 14576631  T
Q  390 ccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||||||| || ||||||  ||| || ||||||||| || ||||| || |||||||||||||    
T  14576630 ccaaacagtgccacaaaatttaagccagtagataagctcaaataagccaatccaaacaggc 14576570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 17603476 - 17603409
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 338  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||| || ||||| ||||    
T  17603476 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 45975677 - 45975740
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| |||| ||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  45975677 tttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaa 45975740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 7472287 - 7472361
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||||  ||||||| ||||| ||||| ||||||||||||  |||||||| |||||||||    
T  7472287 aagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaa 7472361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 15784224 - 15784282
Alignment:
Q  172 ccctgtttg-ataaacagtttatatcacaagcacttatcatgataagtgcttatgtata 229  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  15784224 ccctgtttggataaacagtttatatcacaagcacttattatgataagcgcttatgtata 15784282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 47432035 - 47432145
Alignment:
Q  231 gcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatg 330  Q
    ||||||||||||||||| ||||| |||||       ||||||||||||||||||| |||||||||||| |||||| ||||  ||| ||| ||||||||||    
T  47432035 gcttacataagctatttttatagaaaaagataaaa-taaagttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatg 47432132  T
Q  331 aaattaagctgaa 343  Q
    ||| |||||||||    
T  47432133 aaaataagctgaa 47432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 51695585 - 51695515
Alignment:
Q  273 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| ||||| | ||| || ||||||||||| |||||||||||||||||||||| |||||||||    
T  51695585 taaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaa 51695515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 2294885 - 2294961
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||| ||||||||||||| ||| |||| |||| ||||    
T  2294885 taaagttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaa 2294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 23445312 - 23445364
Alignment:
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  23445312 gttaaattgtttttgtataagccataagttgttttcataagctatcttggaga 23445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 34290210 - 34290286
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| ||  ||||||||| |||||||| ||||||||||| |||||||| |||| |||||||| |||||||||    
T  34290210 taaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaa 34290286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 37769756 - 37769680
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| ||||||| ||||||| |||||||||| |||| || ||||| |||||||||||||  ||||||||    
T  37769756 taaagttaaattatttttgtttatgctacaagttgtttttataagctgtcttgcagaatttatgaaaacaagctgaa 37769680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 38018460 - 38018384
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||   |||||||||||||| |||||| |||||||||    
T  38018460 taaagttaaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaa 38018384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 339
Target Start/End: Original strand, 49888741 - 49888813
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    ||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| ||||| |||||||| |||||    
T  49888741 taaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 49888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 7137081 - 7137018
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  7137081 tttttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaa 7137018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 17830052 - 17830115
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    ||||||||||||||||||||||||||||  ||||| |||| | ||||||||||||||| |||||    
T  17830052 ttatatcacaagcacttatcatgataagcacttatctatacgattacataagctatttttatag 17830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 37295814 - 37295763
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatctt 318  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  37295814 taaagttaaattgttttcgtttaagctataagttgttttcataacctatctt 37295763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 5741560 - 5741622
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctata 252  Q
    ||||| ||||||||| |||||||||||| ||||||||||| | ||||||||||||||| ||||    
T  5741560 ttatagcacaagcacctatcatgataagcgcttatgtataagtttacataagctatttttata 5741622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 46225763 - 46225829
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||| ||| |||||||||||||||| ||||||  |||||||||| |||||||| |||||||||||||    
T  46225763 taaaattagattgtttttgtatatgttataagccgttttcataaactatcttgaagaatttatgaaa 46225829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 1510061 - 1509985
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatctt-ggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||| ||| || ||||  ||||||||||||||||||| |||| |||||||||| |||||||||    
T  1510061 taaagttaaattgtttttg-atacgcgataaactgttttcataacctatcttaggagtatttatgaaaataagctgaa 1509985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 13809972 - 13810045
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| |||| || ||||| || ||||| ||||||    
T  13809972 taaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagct 13810045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 27970391 - 27970314
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataaccta-tcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||| | |||| ||| |||||||| ||| |||||    
T  27970391 taaaattaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaa 27970314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 473138 - 473214
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| || |||||||||||||||||| ||||  | | |||||||| |||||||| |||| ||||    
T  473138 taaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaa 473214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 3070029 - 3069973
Alignment:
Q  269 aagttaaattgttttt-gtatatgctataagttgttttcataacctatcttggagaa 324  Q
    |||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  3070029 aagttaaattgtttttcgtatatgctataagctgttttcgtaagctatcttggagaa 3069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 10809319 - 10809395
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| | ||||||| || ||||||||||||| |||| | |||| |||||||| |||||||| |||||||||    
T  10809319 taaagttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaa 10809395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 25006130 - 25006074
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||| ||||||||||  |||| |||||||||||||||||||| ||||||||||||    
T  25006130 taaagtcaaattgttttcatataagctataagttgttttcataagctatcttggaga 25006074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 34952189 - 34952265
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||| | ||| ||| |||||||||||||||| |||||   ||||| |||||||| |||||||||    
T  34952189 taaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaataagctgaa 34952265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 37842451 - 37842375
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| ||| || | ||| |||||||||||||||||||| |||||||| |||| |||| ||| |||||||||    
T  37842451 taaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaa 37842375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 338
Target Start/End: Original strand, 42174770 - 42174900
Alignment:
Q  205 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttt 304  Q
    |||| |||||||| ||||||||||| |||| |||| ||||||| ||||  |||||       ||| ||||||  ||||||||||||||||||||||||||    
T  42174770 ttattatgataagggcttatgtataagcttgcataggctatttttatatcaaaagataaag-taatgttaaa--gtttttgtatatgctataagttgttt 42174866  T
Q  305 tcataacctatcttggagaatttatgaaattaag 338  Q
    | ||||  ||| |||||||| |||||||| ||||    
T  42174867 ttataagttatattggagaacttatgaaaataag 42174900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 424
Target Start/End: Original strand, 6556947 - 6557100
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataa 368  Q
    ||||||||||||||||||||||| ||||||||||||| ||||  ||| ||  |||| |||||| | |||||| ||      ||| |||||| ||||||||    
T  6556947 aagttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagctaaaaaaaaccttttgaaaactgtcataa 6557046  T
Q  369 gcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataa 424  Q
    || |||||||||||| || || |||| | | ||||||| |||||| ||||||||||    
T  6557047 gc-tattttcataag-ttctctcaaatagtctcacaaaacttatgttagtagataa 6557100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 5720879 - 5720941
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctata 252  Q
    ||||| ||||||||| |||||||||||| ||||||||||| | |||| |||||||||| ||||    
T  5720879 ttataacacaagcacctatcatgataagcgcttatgtataagtttacgtaagctatttttata 5720941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 318
Target Start/End: Complemental strand, 12287279 - 12287237
Alignment:
Q  276 attgtttttgtatatgctataagttgttttcataacctatctt 318  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  12287279 attgtttttgtatatgctataagttgttttcttaagctatctt 12287237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 414
Target Start/End: Original strand, 49938734 - 49938865
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttca 379  Q
    |||||||||||| ||||||||||||| |||| |||| || ||||| |||||||| |||| ||||      ||| |||||| |||||||||| | ||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaa-aaaagcttttgaaaattgtcataagc-tgttttca 49938831  T
Q  380 taagtttttcccaaacaatgtcacaaatcttatgc 414  Q
    |||| || ||||||||||| ||||||| |||||||    
T  49938832 taag-ttctcccaaacaatctcacaaaacttatgc 49938865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 11893084 - 11893133
Alignment:
Q  180 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtata 229  Q
    ||||||||| |||| ||||||||||||||||||||||| |||| ||||||    
T  11893084 gataaacagcttatgtcacaagcacttatcatgataagcgcttttgtata 11893133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 15477552 - 15477585
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagtt 300  Q
    ||||||||||||||||||||||||||||||||||    
T  15477552 taaagttaaattgtttttgtatatgctataagtt 15477585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 10799436 - 10799512
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| || |||||| || ||||||||||||| |||| | |||  |||||||| |||||||| |||||||||    
T  10799436 taaagttaaagtgcttttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctgaa 10799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 14331687 - 14331747
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttcta 250  Q
    ||||| ||||||| ||| ||||||||||  |||||||||| ||| ||||||||||||||||    
T  14331687 ttatagcacaagcgcttctcatgataagcacttatgtataagctaacataagctatttcta 14331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 17778932 - 17778991
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaattt 327  Q
    |||||| ||||| |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  17778932 taaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaattt 17778991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 29793756 - 29793832
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| ||||||| ||||| |||||||||||  ||||||| ||||||| ||||  |||||||| |||| ||||    
T  29793756 taaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatgaaactaagttgaa 29793832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 31517836 - 31517760
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||| |||  |||| |||||||| ||| ||||||| || |||||||||  |||||||| |||||||||    
T  31517836 taaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaa 31517760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 38578501 - 38578549
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctat 315  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| ||||    
T  38578501 taaagttaaattatttttgtataagctataagttgtttacataaactat 38578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 6102153 - 6102204
Alignment:
Q  292 ctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||| ||||||||||| |||||| |||||||||||| || |||||||||    
T  6102153 ctataagctgttttcataagctatctgggagaatttatggaaataagctgaa 6102204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 14331970 - 14332032
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||||| || |  ||||||||||| | || |||||||||||||||    
T  14331970 tttttgtatatgctataagttgtttccaaatgctatcttggaggactt-tgaaattaagctgaa 14332032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 24552497 - 24552454
Alignment:
Q  205 ttatcatgataagtgcttatgtataggcttacataagctatttc 248  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  24552497 ttatcatgataagcgcttatgtacaagcttacataagctatttc 24552454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 26779996 - 26779945
Alignment:
Q  292 ctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||| |||||||| |||| |||||||| |||| ||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaa 26779945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 450
Target Start/End: Complemental strand, 32515420 - 32515357
Alignment:
Q  388 tcccaaacaatgtcacaaat-cttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||||||||| | |||||| | |||||| ||||||||||||| ||||| ||||||||||||||||    
T  32515420 tcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaacaggc 32515357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 7244746 - 7244688
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||| ||||| |||||| ||||||||||||| | |||||||||||  |||||||    
T  7244746 aattgttttcgtataagctatacgttgttttcataagcgatcttggagaacgtatgaaa 7244688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 12564569 - 12564519
Alignment:
Q  293 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| ||||||||||||| ||||||||||||| ||||| || |||||||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaa 12564519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 17834158 - 17834208
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataa 240  Q
    ||||| |||||||||||||||||||||||| ||||| ||| ||||| ||||    
T  17834158 ttatagcacaagcacttatcatgataagtgtttatgcataagcttatataa 17834208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 30581776 - 30581814
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgtttt 305  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  30581776 taaagttaaattgtttttttatatgctataagttttttt 30581814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 33186241 - 33186283
Alignment:
Q  268 aaagttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    ||||||||||| || ||||||||||||||||||||||| ||||    
T  33186241 aaagttaaatttttcttgtatatgctataagttgtttttataa 33186283  T

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Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 36872716 - 36872782
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| |||||||||||||||| | || |||| ||| |||| |||||||| |||| ||||    
T  36872716 ttgtttttgtatgtgctataagttgtttttacaagctatattgcagaacttatgaaaataagttgaa 36872782  T

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Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 37631649 - 37631579
Alignment:
Q  273 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||| |||| ||| || ||||||  ||| |||| |||||||| |||||||| |||||||||    
T  37631649 taaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaa 37631579  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 7107606 - 7107537
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||||||||||||  ||||| ||| | |||| ||| |||| |||||| | |||||||||    
T  7107606 aaattgtttttgtatatgctataaactgtttccattaactattttgtagaacttatgacaataagctgaa 7107537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 11218038 - 11218001
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttca 307  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  11218038 agttaaattgttttcgtataagctataagttgttttca 11218001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 14630043 - 14629986
Alignment:
Q  286 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||| | ||||||||| |||||||||||| |||||| || |||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaa 14629986  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 25479574 - 25479631
Alignment:
Q  286 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||||||||||||||| ||||| | ||||  |||||||| |||||||||    
T  25479574 tataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaa 25479631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 35590977 - 35590912
Alignment:
Q  278 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| ||||||||| | |||||||| ||||| ||||||  ||||| || |||||||||    
T  35590977 tgtttttgtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaa 35590912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 37473311 - 37473360
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctatag 253  Q
    |||||||||| |||  |||||||||| ||||||||||||||||| |||||    
T  37473311 cttatcatgacaagcacttatgtataagcttacataagctatttttatag 37473360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 37517290 - 37517233
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||||||||||  |||||||| |||| |||| |||| || |||||    
T  37517290 taaagttaaattgtttttgtatatattataagttattttaataagctatattagagaa 37517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 38247351 - 38247404
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagct 243  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||| |||||||||    
T  38247351 ttatagcacaagcacttatcatgatatgcacttatgtataagctcacataagct 38247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 39596578 - 39596627
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||||||||||||| |||||||| || ||| |||| ||||||||||||    
T  39596578 aaattgtttttgtataagctataagatggttttataagctatcttggaga 39596627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 305
Target Start/End: Original strand, 42391344 - 42391377
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgtttt 305  Q
    ||||||||||||||||||| ||||||||||||||    
T  42391344 ttaaattgtttttgtatattctataagttgtttt 42391377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 296
Target Start/End: Complemental strand, 44932092 - 44932002
Alignment:
Q  202 cacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctata 296  Q
    ||||||||||||||||  |||| ||||| |||| ||||| |||| | ||||| |||||        |||||||||||||||||||||||||||||    
T  44932092 cacttatcatgataagcacttaggtataagcttgcataaactatatttatagcaaaagataa----aaagttaaattgtttttgtatatgctata 44932002  T

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Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 1510398 - 1510330
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||||| | ||||||||||||| |||| || | |||||||| ||| |||| |||| ||||    
T  1510398 aattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaa 1510330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 4576779 - 4576855
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||| | |||||||| | | |||||| ||||||||||| |||| ||| | || |||||||| |||||||||    
T  4576779 taaagttaaaatatttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaa 4576855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 17269224 - 17269280
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||| ||||||||||  |||| || ||||||||||||||||| ||||| ||||||    
T  17269224 taaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggaga 17269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 28287798 - 28287834
Alignment:
Q  281 ttttgtatatgctataagttgttttcataacctatct 317  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  28287798 ttttgtataagctataagttgttttcataacatatct 28287834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 30582044 - 30581996
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctat 315  Q
    ||||||||| |||||||||||||||||| ||| |||||| |||| ||||    
T  30582044 taaagttaacttgtttttgtatatgctacaagctgtttttataagctat 30581996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 42391278 - 42391326
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctata 252  Q
    |||||||||||||||||||||||||| |||| | ||| |||||| ||||    
T  42391278 cttatcatgataagtgcttatgtataagcttgcttaaactatttttata 42391326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 42556713 - 42556665
Alignment:
Q  281 ttttgtatatgctataagttgttttcataacctatcttggagaatttat 329  Q
    |||| |||| |||||||||||||||||||| ||||| |||||| |||||    
T  42556713 ttttatataagctataagttgttttcataagctatcatggagagtttat 42556665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 51160585 - 51160509
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||| ||| ||||| |||||| |||||||| | |||||||||  |||||  |||| ||||||| |||||||||||    
T  51160585 taaagtcaaactgtttctgtataagctataagctattttcataagttatctcagagagtttatgatattaagctgaa 51160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 204 - 433
Target Start/End: Original strand, 27028751 - 27028968
Alignment:
Q  204 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 303  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||| ||||  ||          | |||||||||||||| ||||||||||||||| ||||    
T  27028751 cttatcatgataagtgcttttgtataagcttacataagttatttttataacaa---------ctgaagttaaattgtttgtgtatatgctataagctgtt 27028841  T
Q  304 ttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtttttcccaaacaatgtcac 403  Q
    ||||||| ||||||||||||  |||||||| |||||||||   |  |||||||||| |||| ||||| | |||||| || ||| ||||||||||| ||||    
T  27028842 ttcataagctatcttggagagcttatgaaaataagctgaa-aatagcttatgaaaaatgtcctaagc-tgttttcagaa-tttctcccaaacaatctcac 27028938  T
Q  404 aaatcttatgctagtagataaacttaaata 433  Q
     || ||||||| ||| |||||||| |||||    
T  27028939 taaacttatgccagtggataaactcaaata 27028968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 25930696 - 25930574
Alignment:
Q  220 cttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||||||||| ||||||||||||||||||||||||||| |       |||| ||||| |||||||||||||||| ||| |||||||||||| ||||||||    
T  25930696 cttatgtataagcttacataagctatttctataggaaa-ggatgaaataaaattaaaatgtttttgtatatgctttaaattgttttcataagctatcttg 25930598  T
Q  320 gagaatttatgaaattaagctgaa 343  Q
    ||||| || ||| | |||||||||    
T  25930597 gagaacttgtgatagtaagctgaa 25930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 342
Target Start/End: Complemental strand, 29168224 - 29168078
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| |||||||  ||||||| | ||||||||||||||| ||| ||||||||||||||||||| |||||       |||| | ||||| ||||||||||    
T  29168224 ttatagcacaagcgtttatcatcaaaagtgcttatgtataagctcacataagctatttctatagcaaaag------ataaaataaaattatttttgtata 29168131  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 342  Q
    ||||||||| ||||||| | | ||||||||||||| ||||| || ||||||||    
T  29168130 tgctataagctgttttcctgagctatcttggagaacttatggaaataagctga 29168078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 29205784 - 29205848
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  29205784 aagttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaa 29205848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 10758428 - 10758304
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||| |||||||||||||||||||| ||||||||| ||| || ||| |||||||||||| |||         |||||||||||||||||||||||    
T  10758428 ttatagcactagcacttatcatgataagtgattatgtataagctcacgtaaactatttctatagcaaat-cataaaataaagttaaattgtttttgtata 10758330  T
Q  290 tgctataagttgttttcataacctat 315  Q
    ||||||||||||| || |||| ||||    
T  10758329 tgctataagttgtctttataagctat 10758304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 324
Target Start/End: Complemental strand, 42043536 - 42043384
Alignment:
Q  172 ccctgtttg-ataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaa 270  Q
    ||||||||| |||||||| |||| ||||||   ||||| | ||||||  |||||||||| ||||||||| ||||||||||||| |||||       |  |    
T  42043536 ccctgtttggataaacagcttatgtcacaactgcttattacgataagcacttatgtataagcttacatatgctatttctatagcaaaagataaaa-tgca 42043438  T
Q  271 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||    
T  42043437 gttaaattgtttttggatatgatataagttgttttcataagctatcttagagaa 42043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 343
Target Start/End: Original strand, 12976117 - 12976262
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctat 295  Q
    |||| ||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||        ||||||||||||  |||| |||||||||     
T  12976117 cacaggcactcatcatgataagcgcttatgtataagctcacataagctatttctatagcaaaa-tataaaataaagttaaattaattttttatatgctac 12976215  T
Q  296 aagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    || ||||||| |||| |||| || ||||| |||||||| |||||||||    
T  12976216 aatttgtttttataagctatattagagaacttatgaaa-taagctgaa 12976262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 315
Target Start/End: Original strand, 38750267 - 38750380
Alignment:
Q  201 gcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagtt 300  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||| |||||| | ||       ||| |||||| |||||||||||||| ||||||||    
T  38750267 gcacttatcatgataagcgcttatgtataagcttgcataagctatttttataggcagag-aaaaaataatgttaaaatgtttttgtatatgatataagtt 38750365  T
Q  301 gttttcataacctat 315  Q
    ||||| |||| ||||    
T  38750366 gtttttataagctat 38750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 267 - 450
Target Start/End: Original strand, 38648325 - 38648505
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcat 366  Q
    |||| |||| ||||||||||||||| ||| |||||||||||||| |||||||| |||| ||||||||||| ||| ||      ||||||| || ||||||    
T  38648325 taaaattaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaa-aaaagcttatgagaactgtcat 38648423  T
Q  367 aagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
     ||| | ||||||||||  | ||||||||| | ||||||| ||||||  ||||||||| |||||||| || ||||| |||||||    
T  38648424 gagc-tgttttcataag-gtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataagccaatcctaacaggc 38648505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 1058246 - 1058100
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 289  Q
    ||||| ||||||| ||||  |||||||| ||||||||||| ||||||||||||||||| |||| | |||        |||||||||  ||||||||||||    
T  1058246 ttatagcacaagcgcttactatgataagcgcttatgtataagcttacataagctatttttata-gcaaatcataaaataaagttaatctgtttttgtata 1058148  T
Q  290 tgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    ||||||||| | |||||| |   |||||||||||| |||||||| |||||    
T  1058147 tgctataagctattttcaca--ttatcttggagaacttatgaaaataagc 1058100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 37353345 - 37353269
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||| ||||||| ||||  |||||||| ||| |||||    
T  37353345 taaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaa 37353269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 43045691 - 43045640
Alignment:
Q  400 tcacaaatcttatgctagtagataaacttaaataggctaatccaaacaggct 451  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  43045691 tcacaaatcttatgctagtagataagcttaaataagccaatccaaacaggct 43045640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 9956884 - 9956834
Alignment:
Q  293 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaa 9956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 18133632 - 18133706
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| |||||||||| ||||||| || ||| |||| |||| |||||||| |||||||| |||||||||    
T  18133632 aagttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaa 18133706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 24558829 - 24558883
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||    
T  24558829 aagttaaattattttcgtataagctataagttgttttcataagctatcttggaga 24558883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 16734003 - 16734046
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataa 310  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  16734003 taaacttaaattgtttttgtatatgctataagttgttttgataa 16734046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 32975964 - 32976027
Alignment:
Q  196 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 259  Q
    |||||||| |||| ||||||||||||||| |||| |||| |||||||||||| ||||| |||||    
T  32975964 cacaagcagttattatgataagtgcttatatataagcttgcataagctatttttatagcaaaag 32976027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 8146229 - 8146358
Alignment:
Q  197 acaagcacttatcatgataagtgcttatgtatag----gcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta---ta 289  Q
    |||| ||||||||||||||| ||||||| ||||     ||||||||||||| |||||||||||||||       || |||||| |||||||||||   ||    
T  8146229 acaaacacttatcatgataaatgcttatatatatataagcttacataagctttttctataggaaaag--taaattatagttaagttgtttttgtatatta 8146326  T
Q  290 tgctataagttgttttcataacctatcttgga 321  Q
    | |||||| |||||||||||| ||||||||||    
T  8146327 tactataatttgttttcataagctatcttgga 8146358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 32841391 - 32841341
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatg 330  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||| |||||    
T  32841391 tttttgtataagctataagctgttttcataagctatcttggagaagttatg 32841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 339
Target Start/End: Original strand, 38602309 - 38602379
Alignment:
Q  269 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    ||||||||||| ||||| |||||||||||| |||||| |||| ||||  |||||||||| ||||| |||||    
T  38602309 aagttaaattgcttttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataagc 38602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 10120733 - 10120806
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||||| |||||  ||||||| ||||| ||| | |||| |||||||| |||||||| |||||||||    
T  10120733 agttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaa 10120806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 424
Target Start/End: Original strand, 26771239 - 26771393
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcat 366  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||  ||| || ||||| |||||||| |||| ||||      ||| |||||| ||||||    
T  26771239 taaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaa-aaaggcttttgaaaattgtcat 26771337  T
Q  367 aagcttattttcataagtttttcccaaacaatgtcacaaatcttatgctagtagataa 424  Q
    |||| | |||||||||| || ||||||||| | ||||||| |||||||  ||||||||    
T  26771338 aagc-tgttttcataag-ttctcccaaacagtctcacaaaacttatgcccgtagataa 26771393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 35534707 - 35534637
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    |||||||||||||||||||||| |  |||| |||||||||||||  ||| |||||||| |||||||| |||||    
T  35534707 taaagttaaattgtttttgtatgt--tatatgttgttttcataagttatattggagaacttatgaaagtaagc 35534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 16210982 - 16210906
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||| ||||||||  |||| ||||||||||||||||| ||||||||| |  ||| ||| |||| |||||||||    
T  16210982 taaagttacattgttttcatataagctataagttgttttcaaaacctatctagtggaacttacgaaaataagctgaa 16210906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 30251540 - 30251476
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctg 341  Q
    ||||| ||||||||| |||||| ||||||||||| ||||||||||  | |||||||| |||||||    
T  30251540 ttgttattgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctg 30251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 43504733 - 43504801
Alignment:
Q  275 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| ||| | |||||||| |||||| |||| ||||||||||||| ||||| || |||||||||    
T  43504733 aattgttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaa 43504801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 12010870 - 12010917
Alignment:
Q  277 ttgtttttgtatatgctataagttgttttcataacctatcttggagaa 324  Q
    |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  12010870 ttgtttttgtgtatgctataagttgttttcataatctgtattggagaa 12010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 37945489 - 37945544
Alignment:
Q  192 atatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    |||||||||||||||||||| |||| ||||||| |||| |||| | ||||||||||    
T  37945489 atatcacaagcacttatcataataaatgcttatctataagcttgcttaagctattt 37945544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 8062317 - 8062379
Alignment:
Q  281 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||  ||||| || |||||||||    
T  8062317 ttttgtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaa 8062379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 11861735 - 11861844
Alignment:
Q  220 cttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||||||||| ||| ||||||||||||||||||| ||| |       ||||||||| ||   |||||||||||||||||||||||| |||| ||||  |     
T  11861735 cttatgtataagctcacataagctatttctatagcaaa-gaacaaaataaagttaattt---tttgtatatgctataagttgtttttataagctataata 11861830  T
Q  320 gagaatttatgaaa 333  Q
    ||||| ||||||||    
T  11861831 gagaacttatgaaa 11861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 14242886 - 14242952
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    ||||||||||||| ||||| ||| |||||||   |||||||||| ||||| ||||||| ||||||||    
T  14242886 taaagttaaattgattttgcataagctataacacgttttcataaactatcatggagaagttatgaaa 14242952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 34290857 - 34290919
Alignment:
Q  281 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||| |||||||||||||  ||| ||||| |||||| || |||||| |||||||||    
T  34290857 ttttgtatatgttataagttgtttttctaatctatcctggagagttaatgaaaataagctgaa 34290919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 38353235 - 38353305
Alignment:
Q  177 tttgataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    |||||||  ||| |||||| |||||  |||||||||||||  ||||||||||| |||| ||||||||||||    
T  38353235 tttgatatgcagcttatattacaagtgcttatcatgataatcgcttatgtataagcttgcataagctattt 38353305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 4526405 - 4526360
Alignment:
Q  213 ataagtgcttatgtataggcttacataagctatttctataggaaaa 258  Q
    ||||| |||| ||||||||||||||||| |||||||||||| ||||    
T  4526405 ataagcgcttgtgtataggcttacataaactatttctatagcaaaa 4526360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 6881908 - 6881972
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 339  Q
    ||||||||||| ||||||||||||| |||||| |||| |||  |||||||| |||||||| |||||    
T  6881908 aaattgtttttatatatgctataagctgtttt-ataagctaaattggagaacttatgaaaataagc 6881972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 9834878 - 9834833
Alignment:
Q  274 aaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    ||||||||||  |||| |||||||||||||||||||| ||||||||    
T  9834878 aaattgttttcatataagctataagttgttttcataagctatcttg 9834833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 14956467 - 14956410
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 247  Q
    ||||| ||||| | ||||||||||||||  |||||||||| |||| ||||||||||||    
T  14956467 ttatagcacaatcgcttatcatgataagcacttatgtataagcttgcataagctattt 14956410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 450
Target Start/End: Original strand, 16162873 - 16162914
Alignment:
Q  409 ttatgctagtagataaacttaaataggctaatccaaacaggc 450  Q
    ||||||||||||||||||| ||||| || |||||||||||||    
T  16162873 ttatgctagtagataaactcaaataagccaatccaaacaggc 16162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 16736063 - 16736124
Alignment:
Q  272 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 333  Q
    |||||| ||||||||| ||| |||||||||| || |||| |||| ||||| |||||||||||    
T  16736063 ttaaatagtttttgtacatgttataagttgtctttataaactatattggaaaatttatgaaa 16736124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 28769416 - 28769359
Alignment:
Q  286 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||| |||||||| ||||||||||| |||| ||||||| |||||| || |||||||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaa 28769359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 29891114 - 29891061
Alignment:
Q  270 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    ||||| |||||||| |||||  || |||||||||||||||| ||||||||||||    
T  29891114 agttatattgttttagtataaactgtaagttgttttcataagctatcttggaga 29891061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 31916523 - 31916568
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggctta 235  Q
    |||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  31916523 ttatgtcataagcacttatcatgataagcgcttatgtataagctta 31916568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 6509399 - 6509343
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 323  Q
    |||||| ||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||    
T  6509399 taaagtcaaattgtatttatataagctataagctgttttcataagctatcctggaga 6509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 7918869 - 7918817
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 319  Q
    |||||||||||| ||||  | || |||||||||||||||||||| ||||||||    
T  7918869 taaagttaaatttttttcttgtaagctataagttgttttcataagctatcttg 7918817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Original strand, 21653055 - 21653131
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    ||||||||||||| ||| || || |||| || ||| |||||| | ||||||||||||  |||||||| |||||||||    
T  21653055 taaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggagagcttatgaaaataagctgaa 21653131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 28710103 - 28710063
Alignment:
Q  67 tttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    ||||||||||||||| |||||||||||| |||||| |||||    
T  28710103 tttggtaaaaatagcggatagttgataagttagctgatagc 28710063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 28717450 - 28717410
Alignment:
Q  67 tttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    ||||||||||||||| |||||||||||| |||||| |||||    
T  28717450 tttggtaaaaatagcggatagttgataagttagctgatagc 28717410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 41314344 - 41314296
Alignment:
Q  59 tgactctatttggtaaaaatagcagatagttgataacttagcttatagc 107  Q
    ||||||| ||||||||||||||| ||||| |||||| |||||| |||||    
T  41314344 tgactctgtttggtaaaaatagcggatagctgataagttagctgatagc 41314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 41442585 - 41442553
Alignment:
Q  202 cacttatcatgataagtgcttatgtataggctt 234  Q
    ||||||||||||||||| |||||||||||||||    
T  41442585 cacttatcatgataagtacttatgtataggctt 41442553  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 43718020 - 43717960
Alignment:
Q  280 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 340  Q
    |||||| ||| | |||||| ||||| ||||| ||||||||||||| |||||||| ||||||    
T  43718020 tttttggataagttataagctgtttgcataagctatcttggagaacttatgaaagtaagct 43717960  T

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Target: scaffold0528 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 324
Target Start/End: Complemental strand, 1141 - 1011
Alignment:
Q  188 gtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta 287  Q
    ||||||| |||| || |||||||||||||||| |||| |||| |||||||||| || ||||||| | |||||       |||| | |||||||||| |||    
T  1141 gtttatagcacatgcgcttatcatgataagtgattatctataagcttacataatctgtttctatggcaaaaga------taaaataaaattgttttcgta 1048  T
Q  288 tatgctataagttgttttcataacctatcttggagaa 324  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  1047 tatgctataagttgtttccataaactattttggagaa 1011  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 158005 - 158073
Alignment:
Q  190 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaa 258  Q
    ||||| ||||| ||||||| ||||||| |||||||| ||  ||||||||||||||||| ||||| ||||    
T  158005 ttatagcacaaacacttatgatgataattgcttatgcattagcttacataagctatttttatagaaaaa 158073  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 178421 - 178345
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 343  Q
    |||||||||||| || | ||||| ||||| || |||||||| || | ||||| ||||| |||||||| |||||||||    
T  178421 taaagttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaa 178345  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 11851 - 11814
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttt 304  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  11851 taaagttaaattgttttcgtataagctataagttgttt 11814  T

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Target: scaffold0167 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 17275 - 17312
Alignment:
Q  292 ctataagttgttttcataacctatcttggagaatttat 329  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  17275 ctataagttgttttcataagctatcttggagaacttat 17312  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 27550 - 27603
Alignment:
Q  267 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgg 320  Q
    |||||| ||||||||||  ||||  ||||||||||||||||||| |||||||||    
T  27550 taaagtcaaattgttttcatataaactataagttgttttcataaactatcttgg 27603  T

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