View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8888_low_94 (Length: 266)
Name: NF8888_low_94
Description: NF8888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8888_low_94 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 32033129 - 32033359
Alignment:
| Q |
22 |
aactaaggtccctttcacgattcatctcttaattaagcttattaacaacttgacaaacatttgcttgggatggattattgttgctttaaataaagcaagc |
121 |
Q |
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| T |
32033129 |
aactaaggtccctttcacaattcatcttttaactaagcttattaacaacttgacaaacaattgcttgggatggattattgttgctttaaataaagcaagc |
32033228 |
T |
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| Q |
122 |
attggaatgaaaaatacgaaaaccatctcctttcatttcctttttacgttttgggattctttcgtgtgattatgg-------taattattg-ttttgtta |
213 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
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| T |
32033229 |
attggaatgaaaaatacgaaaaccatctcatttcatttcctttttacgttttgggattctttcgtgtgattatggtcaatattaattattgtttttgtta |
32033328 |
T |
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| Q |
214 |
aacgttttgtcttttgccttccaagcactaa |
244 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
32033329 |
aacgttttgtcttttgccttccaagcactaa |
32033359 |
T |
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