View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8889_high_28 (Length: 310)
Name: NF8889_high_28
Description: NF8889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8889_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 286
Target Start/End: Complemental strand, 36952597 - 36952325
Alignment:
| Q |
14 |
atggacatcatgtactcggccgcatccaatttgaacatttctctcaaattcctggaaatatatgaaatcacataaagaatatgtgcttataatcataact |
113 |
Q |
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| T |
36952597 |
atggacatcatgtactcggccgcatccaatttgaacatttctctcaaattcctggaaatatatgaaatcacataaagaatatgtgcttataatcataact |
36952498 |
T |
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| Q |
114 |
ctgactaagaactctaatacaccacaataatcataaaatcatattatatcaagaacctatatacatgttattctgataatgaatacctgaagaccatagg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952497 |
ttgactaagaactctaatacaccacaataatcataaaatcatattatatcaagaacctatatacatgttattctgataatgaatacctgaagaccatagg |
36952398 |
T |
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| Q |
214 |
gcaataatctttccagtagaagtctacagaacagtgtggaggagtcaattgtgaaccctccttaggaaagtac |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952397 |
gcaataatctttccagtagaagtctacagaacagtgtggaggagtcaattgtgaaccctccttaggaaagtac |
36952325 |
T |
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