View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8889_high_46 (Length: 257)
Name: NF8889_high_46
Description: NF8889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8889_high_46 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 28 - 241
Target Start/End: Complemental strand, 29517797 - 29517584
Alignment:
| Q |
28 |
aagtctttaggaaagcttataacgctcctataaaccaacaaaatcaatggtgtgcccttcaatgttgtataatggagtaaggccactctcaagtagtact |
127 |
Q |
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| T |
29517797 |
aagtctttaggaaagcttataacgctcctataaaccaacaaaatcaatggtgtgcccttcaatgttgtataatggagtaaggccactctcaagtagtact |
29517698 |
T |
|
| Q |
128 |
tgcctaagtcatcactcatttgaaattgggaaatctcacaccttaagttgtcatttgcacgttacaagagaagaagaaaaatcatggccttctcctcgca |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29517697 |
tgcctaagtcatcactcatttgaaattgggaaatctcacaccttaagttgtcatttgcacgttacaagagaagaagaaaaatcatggccttctcctcgca |
29517598 |
T |
|
| Q |
228 |
tttaaggcattgtc |
241 |
Q |
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|||||||||||||| |
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| T |
29517597 |
tttaaggcattgtc |
29517584 |
T |
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