View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8889_low_149 (Length: 243)
Name: NF8889_low_149
Description: NF8889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8889_low_149 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 24013954 - 24014186
Alignment:
| Q |
1 |
ccaactacaatgcaaagaaaaatcaagaataacaccattgaaaaggatccacatgagaaagatacaaatcaatgcacagaacgtccaagaagagggcgta |
100 |
Q |
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| T |
24013954 |
ccaactacaatgcaaagaaaaatcaagaataacaccattgaaaaggatccacatgagaaagatacaaatcaatgcacagaacgtccaagaagagagcgta |
24014053 |
T |
|
| Q |
101 |
taatataagcaatcaaattaaaattgaaaaggatccacatcaaaatttggagattaaatggtttggtcattagatgaatacccctaaagctttcaataca |
200 |
Q |
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| T |
24014054 |
ttatataagcaatcaaattaaaattgaaaaggatccacatcaaaatttggagattaaatggtttgttcattagatgaatacccctaaagctttcaataca |
24014153 |
T |
|
| Q |
201 |
tgctcaggtgcaatcgtccttctttcctctctg |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
24014154 |
tgctcaggtgcaatcgtccttctttcctctctg |
24014186 |
T |
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