View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8889_low_26 (Length: 640)
Name: NF8889_low_26
Description: NF8889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8889_low_26 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 560; Significance: 0; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 560; E-Value: 0
Query Start/End: Original strand, 1 - 623
Target Start/End: Original strand, 31390368 - 31390990
Alignment:
| Q |
1 |
gtcaagtcaggagcaacaagactatcaaaattgacttgggaagcatccacttgaatagcatgataatcagcagcattggttaattcttcagaatgttctg |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31390368 |
gtcaagtcaagagcaacaagactatcaaaattgacttgggaagcatccacttgaatagcatgataatcagcagcattggttaattcttcagactgttctg |
31390467 |
T |
|
| Q |
101 |
taggggcatgcaaataaaagtgaagaatgatgaggggataactgaaacacaccccagcaatgaccaaaatgaactttatcttcatgagttgtaaaattag |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31390468 |
taggggcatgcaaataaaagcgaagaatgatgaggggataactgaaacacaccccatcaatgaccaaaatgaactttatcttcatgagttgtaaaattag |
31390567 |
T |
|
| Q |
201 |
atatccgcagaaaaaatataaaagatcaacttcgaaaccaaagtgac-tctgctttgacaaaccaagtgacgtgatagcaaaagcggcaccggaaaccaa |
299 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
31390568 |
atatccgca-aaaaaatataaaagatcaacttcgaaaccaaagtgacctctgctttgacaaaccaagtgacatgatagcaaaagcggcaccggaaaccaa |
31390666 |
T |
|
| Q |
300 |
actgtacacatctggttttccgttagctttatcaaagaaaaaggagtaaacagttgttattgtgaaaatagagaataccaaatgagctctaagcctgaga |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31390667 |
actgtacacatctggttttccgttagctttatcaaagaaaaaggagtaaactgttgttattgtgaaaatagagaataccaaatgagctctaagcctgaga |
31390766 |
T |
|
| Q |
400 |
cttggtgagttttgccatttgtttgcaaaaaagatggctagacaaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaa |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
31390767 |
cttggtgagttttgccatttgtttgcaaaaaagatggcaaggcaaataatgaaactgaaaacagtgtacagaaaaatctttaacaagttccagtttccaa |
31390866 |
T |
|
| Q |
500 |
atagatggttgaaggaagaacttagagcataacagaggcagccaataaaagatgatgtaaaactcacaaatctccatacctttggctgctttagccatct |
599 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31390867 |
atagatggttgaaggaagaacttagagcataacagaggaagccaataaaagatgatgtaaaactcacaaatctccatacctttggctgctttagccatct |
31390966 |
T |
|
| Q |
600 |
cacaatttgtttaaccatgttgtt |
623 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
31390967 |
cacaatttgtttaaccatgttgtt |
31390990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 1 - 533
Target Start/End: Original strand, 31462542 - 31463090
Alignment:
| Q |
1 |
gtcaagtcaggagcaacaagactatcaaaattgacttgggaagcatccacttgaatagcatgataatcagcagcattggttaattcttcagaatgttctg |
100 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||| |||| ||||||| | ||||||||||||||| |||||||||||||||||||| || || |
|
|
| T |
31462542 |
gtcaagtcaggagcaacaagacaatcagaattgacttgggagccatcaacttgaacaacatgataatcagcagtattggttaattcttcagaatattttg |
31462641 |
T |
|
| Q |
101 |
taggggcatgcaaataaaagtgaagaatgatgaggggataactgaaacacaccccagcaatgaccaaaatgaactttatcttcatgagttgtaaaattag |
200 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||||||||||||||| | | |||||||||||||||| |||||||||||||| | ||||||| |||| |
|
|
| T |
31462642 |
taggggcatccaaataaaaacgaagaaagatgaggggataactgaaaatcgctccagcaatgaccaaaaacaactttatcttcattaattgtaaagttag |
31462741 |
T |
|
| Q |
201 |
atatccgcagaaaaa----------------atataaaa-gatcaacttcgaaaccaaagtgactctgctttgacaaaccaagtgacgtgatagcaaaag |
283 |
Q |
| |
|
||||| || ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
31462742 |
atatcgacaaaaaaataaaaaaaataaaaaaataaaaaaagatcaacttcgaaaccaaagtgactctgctttgacaaaccaagtgacattatagcaaaag |
31462841 |
T |
|
| Q |
284 |
cggcaccggaaaccaaactgtacacatctggttttccgttagctttatcaaagaaaaaggagtaaacagttgttattgtgaaaatagagaataccaaatg |
383 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
31462842 |
ccgcaccggaaaccaaactgtacacatctggttttccgttatctttatcaaagaaaaacgagtaaacaaatgttattgtgaaaataga-aatacgaaata |
31462940 |
T |
|
| Q |
384 |
agctctaagcctgagacttggtgagttttgccatttgtttgcaaaaaagatggctagacaaataatgaaactgaaaacagtgtagagaataatcttcaac |
483 |
Q |
| |
|
|||| | |||| || |||||| |||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31462941 |
agctgtgagccggaaacttggctagttctgccatttgtttgcaaaaatgattgcaagacaaataatgaaactgaaaacagtgtagagaataatcttcaac |
31463040 |
T |
|
| Q |
484 |
aagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
31463041 |
aagttccaatttccaaatagatggttgaaggaagagcttacagcataaca |
31463090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 126 - 608
Target Start/End: Original strand, 31387461 - 31387946
Alignment:
| Q |
126 |
aatgatgaggggataactgaaacacaccccagcaatgaccaaaatgaactttatcttcatgagttgtaaaattagatatccgcagaaaaaatataaaaga |
225 |
Q |
| |
|
||||||||||| ||||||||||| | | ||| |||| || |||| || ||||||||||| ||||||||| ||| ||||||||| |||||||||| ||| |
|
|
| T |
31387461 |
aatgatgagggaataactgaaactcgctccaacaattactaaaactaattttatcttcatcagttgtaaagttaaatatccgcaaaaaaaatataggaga |
31387560 |
T |
|
| Q |
226 |
tcaacttcgaaaccaaagtgactctgctttgacaaaccaagtgacgtgatagcaaaagcggcaccggaaaccaaactgtacacatctggttttccgttag |
325 |
Q |
| |
|
||||||||||| || |||||| | ||||||||||||| || ||| |||| |||||||| |||| ||||| || |||||||| ||||||||||||||||| |
|
|
| T |
31387561 |
tcaacttcgaatccgaagtgagtttgctttgacaaactgagagacatgatggcaaaagcagcacaggaaatcagactgtacaaatctggttttccgttag |
31387660 |
T |
|
| Q |
326 |
ctttatcaaagaaaaaggagtaaacagttgttattgtgaaaatagagaataccaaatgagctctaagcctgagacttg-gt--gagttttgccatttgtt |
422 |
Q |
| |
|
|||||||||| || |||||||||||||| || ||| |||||| || || |||||||||||| |||| ||||| | || ||||||||||||||||| |
|
|
| T |
31387661 |
ctttatcaaaaaagaaggagtaaacagtggtgattatgaaaaccgaaaacaccaaatgagctttaagtggaagactagtgttcgagttttgccatttgtt |
31387760 |
T |
|
| Q |
423 |
tgcaaaaaagatggctagacaaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaactt |
522 |
Q |
| |
|
|||||| ||||||| || || |||| ||||||||||| | || |||| | ||| || ||||||||||| ||||||||||| |||||||||| || |
|
|
| T |
31387761 |
tgcaaacaagatggtgaggcagataacgaaactgaaaatgctataaagaaataccttaaaaaagttccagttcccaaatagatgagtgaaggaagagcta |
31387860 |
T |
|
| Q |
523 |
agagcataacagaggcag-ccaataaaagatgatgtaaaactcacaaatctccatacctttggctgctttagccatctcacaatttg |
608 |
Q |
| |
|
||||||||||| | |||| |||| || |||||| |||| |||||||||||||| | ||||||| | | ||||||||||||||| |
|
|
| T |
31387861 |
agagcataaca-aagcagtccaacaacagatgaaacaaaagacacaaatctccatatcattggctgtgtcacccatctcacaatttg |
31387946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 126 - 533
Target Start/End: Original strand, 31460025 - 31460435
Alignment:
| Q |
126 |
aatgatgaggggataactgaaacacaccccagcaatgaccaaaatgaactttatcttcatgagttgtaaaattagatatccgcagaaaaaatataaaaga |
225 |
Q |
| |
|
||||||||||| ||||||||||| | | ||| |||| || |||| || ||||||||||| ||||||||| ||| ||||||||| ||||| |||| ||| |
|
|
| T |
31460025 |
aatgatgagggaataactgaaactcgctccaacaattactaaaaccaattttatcttcatcagttgtaaagttaaatatccgcaaaaaaagtataggaga |
31460124 |
T |
|
| Q |
226 |
tcaacttcgaaaccaaagtgactctgctttgacaaaccaagtgacgtgatagcaaaagcggcaccggaaaccaaactgtacacatctggttttccgttag |
325 |
Q |
| |
|
||||||||||| || |||||| | ||||||||||||| || ||| ||| |||||||| |||||||||| | |||||||| ||||||||||||||||| |
|
|
| T |
31460125 |
tcaacttcgaatccgaagtgagtttgctttgacaaactgagagacatgacggcaaaagcagcaccggaaattagactgtacaaatctggttttccgttag |
31460224 |
T |
|
| Q |
326 |
ctttatcaaagaaaaaggagtaaacagttgttattgtgaaaa-tagagaataccaaatgagctctaagcctgagacttg-gt--gagttttgccatttgt |
421 |
Q |
| |
|
|||||||||| || |||||||||||||| || ||| |||||| ||| || || ||||||||| |||| ||||| | || |||||||||||||||| |
|
|
| T |
31460225 |
ctttatcaaaaaagaaggagtaaacagtggtgattatgaaaaccaga-aaaactaaatgagctttaagtggaagactagtgttcgagttttgccatttgt |
31460323 |
T |
|
| Q |
422 |
ttgcaaaaaagatggctagacaaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaact |
521 |
Q |
| |
|
||||||| |||||||| || || | |||||| |||||||| | ||||||| | ||| || ||||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
31460324 |
ttgcaaacaagatggcgaggcagaaaatgaacctgaaaacgctatagagaagtaccttaaaaaagttccagttcccaaatagatgattgaaggaagagct |
31460423 |
T |
|
| Q |
522 |
tagagcataaca |
533 |
Q |
| |
|
||||||||||| |
|
|
| T |
31460424 |
aagagcataaca |
31460435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 533
Target Start/End: Original strand, 31475921 - 31476012
Alignment:
| Q |
442 |
caaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||||| |
|
|
| T |
31475921 |
caaatgatgaaactgaaaacagtgtaaagaattatcttcaacaaattccagtttccaaatagatagttaaaggaagagcttagagcataaca |
31476012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 533
Target Start/End: Original strand, 40843303 - 40843394
Alignment:
| Q |
442 |
caaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
40843303 |
caaatgatgaaactgaaaacagtgtaaagaattatcttcaacaaattccaatttccaaatagatagttgaaggaagagcttagagcataaca |
40843394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 327 - 577
Target Start/End: Complemental strand, 31483903 - 31483653
Alignment:
| Q |
327 |
tttatcaaagaaaaaggagtaaacagttgttattgtgaaaatagagaataccaaatgagctctaagcctgagacttggtgagttttgccatttgtttgca |
426 |
Q |
| |
|
||||||||||| | ||||||||| |||||| |||||||||| | ||| ||||||||||||| | ||| |||||||| || |||||||| |||||||| |
|
|
| T |
31483903 |
tttatcaaagatataggagtaaatagttgtgattgtgaaaactaaaaatgccaaatgagctctgaacctaagacttggcgacgtttgccatatgtttgca |
31483804 |
T |
|
| Q |
427 |
aaaaagatggctagacaaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagag |
526 |
Q |
| |
|
| || || | || ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||| ||| ||| ||||||||||| ||||||| |
|
|
| T |
31483803 |
atcaaatccgcgatgcagataatgaaactgaaaacagtgtaaagaattatcttcaacaaactccactttccacatatatgattgaaggaagagcttagag |
31483704 |
T |
|
| Q |
527 |
cataacagaggcagccaataaaagatgatgtaaaactcacaaatctccata |
577 |
Q |
| |
|
| ||| |||| ||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
31483703 |
cgtaaaagagtagtccaataatggatgaaacaaaacacacaaatctccata |
31483653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 448 - 536
Target Start/End: Original strand, 31407399 - 31407487
Alignment:
| Q |
448 |
atgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataacagag |
536 |
Q |
| |
|
||||||||||||| |||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
31407399 |
atgaaactgaaaagagtgtaaagaaatatcttcaacaaattccaatttccaaatagatggttgaaggaagtgctgagagcataacagag |
31407487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 308 - 426
Target Start/End: Original strand, 31464803 - 31464921
Alignment:
| Q |
308 |
catctggttttccgttagctttatcaaagaaaaaggagtaaacagttgttattgtgaaaatagagaataccaaatgagctctaagcctgagacttggtga |
407 |
Q |
| |
|
||||||||||| | |||||||||||||||||||| ||||||| ||| || |||||||||| || | | ||||||||||||| | |||||||||||| || |
|
|
| T |
31464803 |
catctggttttgcattagctttatcaaagaaaaatgagtaaatagtagtgattgtgaaaactgaaactgccaaatgagctctgaacctgagacttggcga |
31464902 |
T |
|
| Q |
408 |
gttttgccatttgtttgca |
426 |
Q |
| |
|
||||||||| || ||||| |
|
|
| T |
31464903 |
tttttgccatgtgattgca |
31464921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 448 - 588
Target Start/End: Original strand, 31643866 - 31644006
Alignment:
| Q |
448 |
atgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataacagaggcagccaataa |
547 |
Q |
| |
|
|||||||||||||| |||| || | ||||||||||| ||||| | ||||||||||| |||||||||||| || ||||||||||| || |||| || |
|
|
| T |
31643866 |
atgaaactgaaaacgctgtaaaggaaaatcttcaacagattccaatctccaaatagatagttgaaggaagagctaagagcataacaaagtagtccaacaa |
31643965 |
T |
|
| Q |
548 |
aagatgatgtaaaactcacaaatctccatacctttggctgc |
588 |
Q |
| |
|
|||||| | ||| | ||||||||||||||||||||||||| |
|
|
| T |
31643966 |
tagatgaagcaaagcccacaaatctccatacctttggctgc |
31644006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 31384066 - 31384237
Alignment:
| Q |
111 |
caaataaaagtgaagaatgatgaggggataactgaaacacaccccagcaatgaccaaaatgaactttatcttcatgagttgtaaaattagatatccgcag |
210 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| ||| ||| | || || || | || || ||||||||||| |||||| ||| | |||||||| |
|
|
| T |
31384066 |
caaataaaaacgaagaatgatgagggagtaactgaaactcactccaacgatcactaacaacaatttaatcttcatgagctgtaaagttaaacatccgcag |
31384165 |
T |
|
| Q |
211 |
aaaaaatataaaagatcaacttcgaaaccaaagtgactctgctttgacaaaccaagtgacgtgatagcaaaa |
282 |
Q |
| |
|
||||||||||| |||||||| || || | |||||| | || |||||||||||||| || ||||||||||| |
|
|
| T |
31384166 |
aaaaaatataagagatcaacctcaaattcgaagtgagtttgttttgacaaaccaagatacatgatagcaaaa |
31384237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 448 - 533
Target Start/End: Complemental strand, 31395864 - 31395779
Alignment:
| Q |
448 |
atgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
|||||||||||||| ||||| |||| |||||| |||| ||||||||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
31395864 |
atgaaactgaaaactgtgtaaagaactatcttccacaatctccagtttccaaatagatgattgaaggaagagctgagagcataaca |
31395779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 448 - 533
Target Start/End: Original strand, 31416532 - 31416617
Alignment:
| Q |
448 |
atgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
||||||||| ||| ||| || ||||| | ||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
31416532 |
atgaaactggaaagagtataaagaattaccttcaacaaattccaatttccaaatagatggttgaaagaagagcttagagcataaca |
31416617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 441 - 529
Target Start/End: Complemental strand, 31330036 - 31329948
Alignment:
| Q |
441 |
acaaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcat |
529 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||||| ||||| ||||| ||||| | |||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
31330036 |
acaaatgatgaagctgaaaacagtgtaaagaattatcttgaacaaattccaatctccaaagagatagttgaaggaagaactgagagcat |
31329948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 441 - 529
Target Start/End: Complemental strand, 31378818 - 31378730
Alignment:
| Q |
441 |
acaaataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcat |
529 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||| | |||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
31378818 |
acaaatgatgaagctgaaaacagtatagagaattatcttgaacaaattccaatctccaaagagatagttgaaggaagaactgagagcat |
31378730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 31494138 - 31494194
Alignment:
| Q |
477 |
cttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
31494138 |
cttcaacaaattccaatttccaaatagatggttgaacgaagagcttagagcataaca |
31494194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 588
Target Start/End: Complemental strand, 31284806 - 31284682
Alignment:
| Q |
464 |
tgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataacagaggcag-ccaataaaagatgatgtaaaac |
562 |
Q |
| |
|
||||||| || ||||||| || ||||||| |||||| |||| |||||||||||| |||||||||||||| | |||| |||||| |||||| | ||| | |
|
|
| T |
31284806 |
tgtagaggattatcttcagcagattccagtctccaaagagatagttgaaggaagagcttagagcataaca-aagcagtccaatagcagatgaagcaaagc |
31284708 |
T |
|
| Q |
563 |
tcacaaatctccatacctttggctgc |
588 |
Q |
| |
|
|||||||||||| || ||||||||| |
|
|
| T |
31284707 |
ccacaaatctccacacttttggctgc |
31284682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 31313351 - 31313270
Alignment:
| Q |
448 |
atgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcat |
529 |
Q |
| |
|
|||||||||||||||||||| ||| | ||| ||||| | |||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31313351 |
atgaaactgaaaacagtgtaaagagttatcaccaacatggtccatcctccaaatagatagttgaaggaagaacttagagcat |
31313270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 585
Target Start/End: Complemental strand, 31332304 - 31332167
Alignment:
| Q |
448 |
atgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataacagaggcag-ccaata |
546 |
Q |
| |
|
|||||||||||| || ||||||||| || |||||||| ||||| | |||||| || | |||||||||||| |||| ||||||||| | |||| |||| | |
|
|
| T |
31332304 |
atgaaactgaaagcactgtagagaaatattttcaacaaattccattctccaaagaggtagttgaaggaagagcttaaagcataaca-aagcagtccaaca |
31332206 |
T |
|
| Q |
547 |
aaagatgatgtaaaactcacaaatctccatacctttggc |
585 |
Q |
| |
|
| |||||| | ||| | ||||||||||| ||||||||| |
|
|
| T |
31332205 |
acagatgaagcaaagccaacaaatctccacacctttggc |
31332167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 533
Target Start/End: Original strand, 31505909 - 31505967
Alignment:
| Q |
475 |
atcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
31505909 |
atcttcaaccaattccaatttccaaatagatggataaaggaagaactgagagcataaca |
31505967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 531
Target Start/End: Original strand, 31384365 - 31384451
Alignment:
| Q |
445 |
ataatgaaactgaaaacagtgtagagaataatcttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataa |
531 |
Q |
| |
|
|||||||||||||||| || || |||| | ||| || |||||||| || ||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
31384365 |
ataatgaaactgaaaatggtataaagaaataacttgaaaaagttccatttcccaaatagatgattgaaggaagagctaagagcataa |
31384451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 31464978 - 31465034
Alignment:
| Q |
477 |
cttcaacaagttccagtttccaaatagatggttgaaggaagaacttagagcataaca |
533 |
Q |
| |
|
|||||| || ||||| |||||||||||||| |||||||||| |||||||| ||||| |
|
|
| T |
31464978 |
cttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaaca |
31465034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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