View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8890_low_15 (Length: 559)

Name: NF8890_low_15
Description: NF8890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8890_low_15
NF8890_low_15
[»] chr7 (71 HSPs)
chr7 (11-551)||(13849272-13849812)
chr7 (11-551)||(16573391-16573931)
chr7 (11-551)||(16591731-16592271)
chr7 (29-551)||(7529275-7529797)
chr7 (29-523)||(39995221-39995714)
chr7 (330-551)||(7507205-7507427)
chr7 (127-541)||(15690106-15690508)
chr7 (127-541)||(15697699-15698101)
chr7 (17-291)||(12201456-12201721)
chr7 (17-291)||(12208061-12208326)
chr7 (34-197)||(7506913-7507078)
chr7 (465-551)||(15731648-15731734)
chr7 (351-536)||(15725636-15725824)
chr7 (56-179)||(14039170-14039293)
chr7 (56-179)||(14349200-14349323)
chr7 (403-548)||(42041567-42041711)
chr7 (121-179)||(15103949-15104007)
chr7 (127-179)||(81690-81742)
chr7 (127-179)||(12800902-12800954)
chr7 (127-179)||(16187342-16187394)
chr7 (127-179)||(16475749-16475801)
chr7 (127-179)||(18009801-18009853)
chr7 (127-179)||(23442698-23442750)
chr7 (137-196)||(15339320-15339379)
chr7 (137-196)||(15710618-15710677)
chr7 (64-179)||(16668012-16668127)
chr7 (64-179)||(17642382-17642497)
chr7 (128-179)||(46681807-46681858)
chr7 (127-189)||(14250147-14250209)
chr7 (129-296)||(21518787-21518945)
chr7 (129-178)||(12554950-12554999)
chr7 (127-179)||(13318195-13318247)
chr7 (127-179)||(14169144-14169196)
chr7 (127-179)||(14173391-14173443)
chr7 (127-179)||(14581171-14581223)
chr7 (127-179)||(15097578-15097630)
chr7 (127-179)||(15437183-15437235)
chr7 (127-179)||(16073583-16073635)
chr7 (127-179)||(46348366-46348418)
chr7 (132-179)||(3328301-3328348)
chr7 (132-179)||(12695099-12695146)
chr7 (21-179)||(14265509-14265667)
chr7 (376-454)||(35366213-35366289)
chr7 (127-177)||(45185948-45185998)
chr7 (127-196)||(6412322-6412391)
chr7 (127-179)||(11857316-11857368)
chr7 (132-176)||(13020182-13020226)
chr7 (127-179)||(15722825-15722877)
chr7 (127-179)||(17182324-17182376)
chr7 (127-179)||(19146071-19146123)
chr7 (127-179)||(19600360-19600412)
chr7 (127-179)||(20745470-20745522)
chr7 (127-179)||(35962346-35962398)
chr7 (57-179)||(19152354-19152476)
chr7 (57-179)||(20751753-20751875)
chr7 (134-179)||(11219736-11219781)
chr7 (127-179)||(14281266-14281318)
chr7 (146-181)||(15085552-15085587)
chr7 (239-285)||(18009704-18009751)
chr7 (129-179)||(10520316-10520366)
chr7 (26-76)||(21518684-21518734)
chr7 (391-453)||(41782876-41782938)
chr7 (234-275)||(7507092-7507133)
chr7 (146-179)||(14945501-14945534)
chr7 (146-179)||(15373094-15373127)
chr7 (391-440)||(15731595-15731644)
chr7 (146-179)||(37243929-37243962)
chr7 (127-179)||(15142711-15142763)
chr7 (100-148)||(15731320-15731368)
chr7 (127-179)||(15839076-15839128)
chr7 (221-280)||(46348450-46348510)
[»] chr8 (46 HSPs)
chr8 (12-551)||(43112175-43112714)
chr8 (35-343)||(20386863-20387169)
chr8 (11-551)||(15003465-15004006)
chr8 (17-543)||(22616791-22617316)
chr8 (339-551)||(20385355-20385567)
chr8 (330-551)||(22434314-22434529)
chr8 (19-308)||(22433987-22434275)
chr8 (38-500)||(15267399-15267848)
chr8 (26-295)||(22920355-22920624)
chr8 (342-541)||(22521607-22521805)
chr8 (26-179)||(20011630-20011783)
chr8 (64-179)||(25624215-25624330)
chr8 (127-179)||(14594366-14594418)
chr8 (127-179)||(21683305-21683357)
chr8 (127-179)||(21687654-21687706)
chr8 (127-179)||(21690047-21690099)
chr8 (127-179)||(23652600-23652652)
chr8 (127-179)||(20006744-20006796)
chr8 (127-179)||(21685697-21685749)
chr8 (127-179)||(36445377-36445429)
chr8 (492-551)||(21415417-21415476)
chr8 (127-181)||(20783482-20783536)
chr8 (127-181)||(22175678-22175732)
chr8 (134-179)||(20973646-20973691)
chr8 (127-179)||(20839551-20839603)
chr8 (127-179)||(22063195-22063247)
chr8 (127-179)||(22744213-22744265)
chr8 (127-179)||(33089387-33089439)
chr8 (127-179)||(41009086-41009138)
chr8 (127-178)||(22178103-22178154)
chr8 (211-285)||(23652674-23652749)
chr8 (127-179)||(11392210-11392262)
chr8 (400-480)||(19989376-19989456)
chr8 (127-179)||(22025192-22025244)
chr8 (127-179)||(22050715-22050767)
chr8 (127-179)||(31412114-31412166)
chr8 (127-179)||(31418296-31418348)
chr8 (239-285)||(14594468-14594515)
chr8 (127-190)||(19987808-19987871)
chr8 (127-177)||(1264543-1264593)
chr8 (378-452)||(7301132-7301206)
chr8 (237-294)||(25624377-25624435)
chr8 (127-196)||(19860012-19860081)
chr8 (403-480)||(21861322-21861399)
chr8 (403-480)||(38185778-38185855)
chr8 (237-280)||(20973739-20973783)
[»] chr2 (41 HSPs)
chr2 (11-551)||(23375067-23375605)
chr2 (29-537)||(24160429-24160937)
chr2 (17-498)||(25651426-25651906)
chr2 (334-543)||(40261438-40261649)
chr2 (56-291)||(40261707-40261942)
chr2 (330-551)||(23085549-23085772)
chr2 (127-499)||(22841166-22841525)
chr2 (351-543)||(21903322-21903515)
chr2 (330-551)||(20353137-20353337)
chr2 (21-179)||(24669335-24669493)
chr2 (17-197)||(23085902-23086083)
chr2 (386-537)||(22109588-22109740)
chr2 (221-295)||(23085824-23085899)
chr2 (21-179)||(21121132-21121290)
chr2 (127-179)||(19035991-19036043)
chr2 (127-179)||(23149118-23149170)
chr2 (127-179)||(23560908-23560960)
chr2 (127-179)||(25267712-25267764)
chr2 (127-176)||(23291437-23291486)
chr2 (127-179)||(17634402-17634454)
chr2 (127-179)||(23753299-23753351)
chr2 (127-179)||(25174379-25174431)
chr2 (127-179)||(25365537-25365589)
chr2 (405-548)||(10039933-10040075)
chr2 (132-179)||(32911100-32911147)
chr2 (17-86)||(22790631-22790701)
chr2 (127-177)||(24943888-24943938)
chr2 (127-176)||(20913949-20913998)
chr2 (127-176)||(24652828-24652877)
chr2 (127-179)||(2106082-2106134)
chr2 (127-179)||(8889583-8889635)
chr2 (127-179)||(20648584-20648636)
chr2 (127-179)||(20724521-20724573)
chr2 (127-179)||(24659269-24659321)
chr2 (127-179)||(25107083-25107135)
chr2 (127-179)||(19703097-19703149)
chr2 (127-179)||(22810385-22810437)
chr2 (128-179)||(14564302-14564353)
chr2 (127-179)||(19649159-19649211)
chr2 (127-179)||(27272625-27272677)
chr2 (156-196)||(28970910-28970950)
[»] chr1 (53 HSPs)
chr1 (11-541)||(28204091-28204620)
chr1 (11-551)||(20901280-20901821)
chr1 (29-148)||(14800939-14801058)
chr1 (29-148)||(14809813-14809932)
chr1 (26-291)||(21527161-21527416)
chr1 (403-551)||(21117996-21118143)
chr1 (127-291)||(8683472-8683627)
chr1 (26-199)||(8685740-8685914)
chr1 (21-179)||(21733929-21734087)
chr1 (27-280)||(25091798-25092042)
chr1 (24-179)||(24475850-24476005)
chr1 (127-179)||(15316120-15316172)
chr1 (127-179)||(21410292-21410344)
chr1 (137-196)||(3706393-3706452)
chr1 (21-179)||(21745110-21745268)
chr1 (127-189)||(23631456-23631518)
chr1 (127-176)||(41312659-41312708)
chr1 (127-179)||(5381139-5381191)
chr1 (127-179)||(19853530-19853582)
chr1 (127-179)||(19859665-19859717)
chr1 (127-179)||(21732984-21733036)
chr1 (127-179)||(21986517-21986569)
chr1 (127-179)||(22434570-22434622)
chr1 (127-179)||(23712704-23712756)
chr1 (127-179)||(24238023-24238075)
chr1 (127-190)||(20837818-20837881)
chr1 (130-179)||(31926933-31926982)
chr1 (127-179)||(954705-954757)
chr1 (127-179)||(19666345-19666397)
chr1 (127-179)||(20595728-20595780)
chr1 (127-179)||(20849535-20849587)
chr1 (127-175)||(21698609-21698657)
chr1 (132-179)||(16883173-16883220)
chr1 (127-196)||(20941474-20941543)
chr1 (210-294)||(21986591-21986675)
chr1 (391-548)||(24960158-24960313)
chr1 (127-179)||(20243051-20243103)
chr1 (127-179)||(21664674-21664726)
chr1 (127-179)||(30491054-30491106)
chr1 (127-179)||(36917589-36917641)
chr1 (137-196)||(20823989-20824048)
chr1 (132-179)||(29554069-29554116)
chr1 (127-178)||(29601881-29601932)
chr1 (136-179)||(43088851-43088894)
chr1 (127-165)||(19336297-19336335)
chr1 (129-179)||(36615395-36615445)
chr1 (221-285)||(19853444-19853509)
chr1 (221-285)||(19859579-19859644)
chr1 (242-285)||(11140722-11140766)
chr1 (210-285)||(20086171-20086246)
chr1 (127-179)||(21921270-21921322)
chr1 (127-179)||(24108626-24108678)
chr1 (127-179)||(49328504-49328556)
[»] chr4 (47 HSPs)
chr4 (11-551)||(33661935-33662475)
chr4 (29-553)||(16371104-16371628)
chr4 (11-302)||(8710945-8711236)
chr4 (18-551)||(13877927-13878461)
chr4 (29-523)||(15416262-15416754)
chr4 (11-551)||(13881555-13882073)
chr4 (18-197)||(21189334-21189513)
chr4 (26-199)||(15075857-15076031)
chr4 (127-547)||(32489926-32490335)
chr4 (476-551)||(21189933-21190008)
chr4 (127-179)||(18165901-18165953)
chr4 (127-179)||(30239581-30239633)
chr4 (127-180)||(14555698-14555751)
chr4 (127-179)||(15004728-15004780)
chr4 (127-179)||(15360438-15360490)
chr4 (127-179)||(16228735-16228787)
chr4 (127-179)||(16485153-16485205)
chr4 (127-179)||(17176875-17176927)
chr4 (127-179)||(18261810-18261862)
chr4 (127-179)||(18271775-18271827)
chr4 (127-179)||(41528700-41528752)
chr4 (127-179)||(53904961-53905013)
chr4 (127-181)||(10972550-10972604)
chr4 (90-188)||(15318458-15318556)
chr4 (132-190)||(23122104-23122162)
chr4 (127-196)||(20940759-20940828)
chr4 (127-179)||(11170856-11170908)
chr4 (127-179)||(14821866-14821918)
chr4 (26-162)||(15069295-15069431)
chr4 (127-179)||(15547068-15547120)
chr4 (127-179)||(19127951-19128003)
chr4 (127-181)||(10783899-10783953)
chr4 (342-539)||(15318162-15318356)
chr4 (387-453)||(27849267-27849333)
chr4 (127-196)||(1650673-1650742)
chr4 (211-259)||(14158177-14158225)
chr4 (127-179)||(49051469-49051521)
chr4 (211-258)||(14164862-14164909)
chr4 (144-179)||(43284530-43284565)
chr4 (127-179)||(2972341-2972393)
chr4 (127-179)||(13454239-13454291)
chr4 (234-285)||(14484837-14484889)
chr4 (127-179)||(14487104-14487155)
chr4 (127-179)||(15325383-15325434)
chr4 (127-179)||(16999776-16999828)
chr4 (127-179)||(46044478-46044530)
chr4 (127-179)||(47870647-47870699)
[»] scaffold0034 (3 HSPs)
scaffold0034 (20-551)||(34279-34808)
scaffold0034 (127-179)||(45-97)
scaffold0034 (127-177)||(6204-6254)
[»] chr5 (42 HSPs)
chr5 (17-551)||(21980394-21980946)
chr5 (26-543)||(7785337-7785853)
chr5 (330-551)||(21559137-21559353)
chr5 (29-200)||(21553773-21553944)
chr5 (127-291)||(26706788-26706943)
chr5 (127-291)||(26976522-26976677)
chr5 (125-189)||(15193613-15193677)
chr5 (127-179)||(18819417-18819469)
chr5 (127-179)||(21901476-21901528)
chr5 (127-196)||(22232334-22232403)
chr5 (127-196)||(22237487-22237556)
chr5 (127-179)||(427699-427751)
chr5 (132-196)||(757917-757981)
chr5 (127-179)||(21495375-21495427)
chr5 (127-179)||(21889064-21889116)
chr5 (127-179)||(23443797-23443849)
chr5 (209-291)||(21559001-21559083)
chr5 (128-179)||(23561209-23561260)
chr5 (129-179)||(20843544-20843594)
chr5 (107-181)||(22500166-22500240)
chr5 (127-179)||(17022394-17022446)
chr5 (127-179)||(21830015-21830067)
chr5 (127-179)||(22379954-22380006)
chr5 (130-178)||(25014066-25014114)
chr5 (401-476)||(26753854-26753929)
chr5 (127-179)||(6404113-6404165)
chr5 (127-181)||(27635489-27635543)
chr5 (492-541)||(27869566-27869616)
chr5 (127-179)||(10035625-10035678)
chr5 (127-176)||(20938112-20938161)
chr5 (239-285)||(10035528-10035575)
chr5 (136-179)||(19801540-19801583)
chr5 (127-188)||(20990763-20990824)
chr5 (465-543)||(21624770-21624850)
chr5 (241-285)||(21888967-21889012)
chr5 (127-179)||(5337989-5338041)
chr5 (210-285)||(21901550-21901625)
chr5 (147-179)||(22312462-22312494)
chr5 (127-179)||(23075927-23075979)
chr5 (127-179)||(24058066-24058118)
chr5 (127-179)||(25420292-25420344)
chr5 (127-179)||(39608508-39608560)
[»] scaffold0388 (1 HSPs)
scaffold0388 (29-537)||(15488-15996)
[»] scaffold0556 (2 HSPs)
scaffold0556 (100-551)||(9803-10253)
scaffold0556 (127-179)||(4622-4674)
[»] scaffold0090 (1 HSPs)
scaffold0090 (17-529)||(31801-32316)
[»] scaffold0004 (4 HSPs)
scaffold0004 (11-295)||(204714-204998)
scaffold0004 (26-285)||(384581-384830)
scaffold0004 (127-179)||(327260-327312)
scaffold0004 (127-179)||(321572-321624)
[»] scaffold0500 (1 HSPs)
scaffold0500 (12-551)||(11075-11614)
[»] chr6 (46 HSPs)
chr6 (29-551)||(17526456-17526977)
chr6 (12-551)||(23620590-23621129)
chr6 (129-462)||(9185447-9185766)
chr6 (465-551)||(1584427-1584513)
chr6 (351-536)||(1590337-1590525)
chr6 (26-179)||(18138068-18138221)
chr6 (465-551)||(1639268-1639354)
chr6 (127-179)||(19468333-19468385)
chr6 (137-196)||(1593249-1593308)
chr6 (127-176)||(19819409-19819458)
chr6 (127-179)||(14615899-14615951)
chr6 (127-179)||(19451784-19451836)
chr6 (127-179)||(22798135-22798187)
chr6 (127-179)||(23105702-23105754)
chr6 (127-182)||(18786579-18786634)
chr6 (137-196)||(21724377-21724436)
chr6 (128-179)||(24721108-24721159)
chr6 (128-181)||(17414503-17414556)
chr6 (90-179)||(21476796-21476885)
chr6 (391-480)||(22346892-22346981)
chr6 (400-480)||(17026988-17027068)
chr6 (127-179)||(18315593-18315645)
chr6 (127-179)||(19588198-19588250)
chr6 (127-179)||(22907469-22907521)
chr6 (127-179)||(26418278-26418330)
chr6 (132-179)||(14374942-14374989)
chr6 (132-179)||(23233035-23233082)
chr6 (211-280)||(18315667-18315737)
chr6 (127-179)||(933903-933955)
chr6 (127-179)||(13940905-13940956)
chr6 (127-179)||(19727121-19727173)
chr6 (127-179)||(21470295-21470347)
chr6 (127-179)||(23234542-23234594)
chr6 (127-179)||(27767832-27767884)
chr6 (133-176)||(2708882-2708925)
chr6 (391-440)||(1584517-1584566)
chr6 (391-440)||(1639358-1639407)
chr6 (210-259)||(21470225-21470274)
chr6 (90-179)||(25773183-25773271)
chr6 (127-196)||(28289814-28289882)
chr6 (127-164)||(28359463-28359500)
chr6 (100-148)||(1584793-1584841)
chr6 (127-179)||(12446827-12446879)
chr6 (127-179)||(13127907-13127959)
chr6 (393-457)||(14724683-14724747)
chr6 (127-179)||(17207369-17207421)
[»] scaffold0364 (1 HSPs)
scaffold0364 (311-537)||(7270-7498)
[»] scaffold0860 (1 HSPs)
scaffold0860 (29-402)||(565-938)
[»] scaffold0014 (1 HSPs)
scaffold0014 (29-551)||(188899-189421)
[»] scaffold0058 (3 HSPs)
scaffold0058 (11-189)||(67692-67870)
scaffold0058 (237-307)||(67596-67666)
scaffold0058 (127-196)||(17973-18042)
[»] scaffold0016 (1 HSPs)
scaffold0016 (90-523)||(182487-182919)
[»] scaffold0381 (1 HSPs)
scaffold0381 (111-551)||(13471-13912)
[»] scaffold0130 (1 HSPs)
scaffold0130 (26-551)||(2221-2746)
[»] scaffold0609 (1 HSPs)
scaffold0609 (29-400)||(4771-5142)
[»] chr3 (54 HSPs)
chr3 (11-248)||(30205975-30206212)
chr3 (29-235)||(11325409-11325615)
chr3 (30-547)||(15232352-15232860)
chr3 (30-547)||(15238220-15238728)
chr3 (442-551)||(13836629-13836738)
chr3 (127-179)||(24284046-24284098)
chr3 (127-189)||(15954578-15954640)
chr3 (127-179)||(12153363-12153415)
chr3 (127-179)||(12363881-12363933)
chr3 (127-175)||(13036600-13036648)
chr3 (127-179)||(15011535-15011587)
chr3 (127-179)||(16823426-16823478)
chr3 (127-179)||(17496634-17496686)
chr3 (127-179)||(42109693-42109745)
chr3 (26-188)||(12855374-12855536)
chr3 (127-196)||(10597296-10597365)
chr3 (127-179)||(2269877-2269929)
chr3 (127-179)||(11305386-11305438)
chr3 (127-179)||(11644433-11644485)
chr3 (127-179)||(11939528-11939580)
chr3 (127-179)||(12355598-12355650)
chr3 (127-179)||(12362147-12362199)
chr3 (127-179)||(13692436-13692488)
chr3 (127-179)||(18128186-18128238)
chr3 (128-179)||(15934574-15934625)
chr3 (127-177)||(14288656-14288706)
chr3 (127-181)||(17198665-17198719)
chr3 (127-196)||(16829586-16829655)
chr3 (127-196)||(16838109-16838178)
chr3 (272-404)||(30206215-30206347)
chr3 (127-179)||(11964554-11964606)
chr3 (127-179)||(12479322-12479374)
chr3 (127-179)||(14293218-14293270)
chr3 (127-179)||(14298845-14298897)
chr3 (135-179)||(15518971-15519015)
chr3 (127-179)||(18135956-18136008)
chr3 (127-179)||(18718763-18718815)
chr3 (128-179)||(12274764-12274815)
chr3 (133-179)||(12202791-12202837)
chr3 (134-179)||(12961024-12961069)
chr3 (127-179)||(12255633-12255685)
chr3 (127-179)||(12256078-12256130)
chr3 (127-179)||(14652357-14652409)
chr3 (127-179)||(18961416-18961468)
chr3 (127-179)||(35985195-35985247)
chr3 (127-179)||(49163622-49163674)
chr3 (209-294)||(15011608-15011693)
chr3 (127-189)||(16349079-16349140)
chr3 (127-177)||(20376883-20376933)
chr3 (470-523)||(10200-10253)
chr3 (127-196)||(16382523-16382591)
chr3 (127-175)||(12419919-12419967)
chr3 (127-179)||(15375100-15375152)
chr3 (127-179)||(46070752-46070804)
[»] scaffold0371 (3 HSPs)
scaffold0371 (17-295)||(7925-8205)
scaffold0371 (330-551)||(5523-5746)
scaffold0371 (56-189)||(6549-6682)
[»] scaffold0485 (1 HSPs)
scaffold0485 (127-541)||(2924-3328)
[»] scaffold0234 (1 HSPs)
scaffold0234 (29-303)||(26346-26599)
[»] scaffold0009 (1 HSPs)
scaffold0009 (141-307)||(159580-159746)
[»] scaffold0149 (1 HSPs)
scaffold0149 (330-551)||(27729-27952)
[»] scaffold0117 (1 HSPs)
scaffold0117 (351-551)||(33833-34035)
[»] scaffold0069 (3 HSPs)
scaffold0069 (26-462)||(34759-35182)
scaffold0069 (212-462)||(29518-29764)
scaffold0069 (26-197)||(29758-29930)
[»] scaffold0011 (8 HSPs)
scaffold0011 (127-462)||(21279-21601)
scaffold0011 (127-179)||(56392-56444)
scaffold0011 (127-179)||(147453-147505)
scaffold0011 (127-179)||(154640-154692)
scaffold0011 (127-179)||(252393-252445)
scaffold0011 (127-179)||(258999-259051)
scaffold0011 (127-178)||(187452-187503)
scaffold0011 (127-178)||(197079-197130)
[»] scaffold0028 (2 HSPs)
scaffold0028 (191-307)||(88168-88284)
scaffold0028 (127-179)||(92215-92267)
[»] scaffold0696 (1 HSPs)
scaffold0696 (26-199)||(3045-3219)
[»] scaffold0126 (2 HSPs)
scaffold0126 (483-551)||(5923-5991)
scaffold0126 (127-196)||(44683-44752)
[»] scaffold0001 (3 HSPs)
scaffold0001 (56-179)||(449214-449337)
scaffold0001 (127-177)||(96358-96408)
scaffold0001 (136-179)||(179463-179506)
[»] scaffold1765 (1 HSPs)
scaffold1765 (26-179)||(50-203)
[»] scaffold0585 (1 HSPs)
scaffold0585 (26-452)||(8000-8414)
[»] scaffold0480 (1 HSPs)
scaffold0480 (26-179)||(989-1142)
[»] scaffold0395 (2 HSPs)
scaffold0395 (26-199)||(6955-7128)
scaffold0395 (391-480)||(1999-2089)
[»] scaffold0180 (1 HSPs)
scaffold0180 (127-179)||(12935-12987)
[»] scaffold0005 (3 HSPs)
scaffold0005 (137-196)||(259171-259230)
scaffold0005 (137-196)||(265586-265645)
scaffold0005 (127-179)||(17791-17843)
[»] scaffold2016 (1 HSPs)
scaffold2016 (127-189)||(479-541)
[»] scaffold0298 (2 HSPs)
scaffold0298 (125-179)||(8750-8804)
scaffold0298 (125-179)||(18834-18888)
[»] scaffold0008 (2 HSPs)
scaffold0008 (127-189)||(124544-124606)
scaffold0008 (127-181)||(35285-35339)
[»] scaffold1853 (1 HSPs)
scaffold1853 (127-179)||(468-520)
[»] scaffold0751 (1 HSPs)
scaffold0751 (127-179)||(913-965)
[»] scaffold0661 (1 HSPs)
scaffold0661 (127-179)||(3680-3732)
[»] scaffold0331 (1 HSPs)
scaffold0331 (127-179)||(19005-19057)
[»] scaffold0301 (2 HSPs)
scaffold0301 (127-179)||(3718-3770)
scaffold0301 (132-179)||(13036-13083)
[»] scaffold0244 (4 HSPs)
scaffold0244 (127-179)||(14110-14162)
scaffold0244 (127-179)||(300-352)
scaffold0244 (221-285)||(202-267)
scaffold0244 (221-285)||(14012-14077)
[»] scaffold0139 (2 HSPs)
scaffold0139 (127-179)||(26387-26439)
scaffold0139 (127-179)||(2538-2590)
[»] scaffold0108 (1 HSPs)
scaffold0108 (127-179)||(46013-46065)
[»] scaffold0091 (4 HSPs)
scaffold0091 (127-179)||(22362-22414)
scaffold0091 (127-179)||(26559-26611)
scaffold0091 (237-280)||(22462-22506)
scaffold0091 (237-280)||(26659-26703)
[»] scaffold0054 (3 HSPs)
scaffold0054 (127-179)||(61633-61685)
scaffold0054 (128-179)||(60070-60121)
scaffold0054 (239-280)||(61735-61777)
[»] scaffold0039 (1 HSPs)
scaffold0039 (127-179)||(3400-3452)
[»] scaffold0035 (2 HSPs)
scaffold0035 (127-179)||(1041-1093)
scaffold0035 (127-179)||(10952-11003)
[»] scaffold0434 (1 HSPs)
scaffold0434 (128-179)||(968-1019)
[»] scaffold0156 (1 HSPs)
scaffold0156 (128-179)||(26096-26147)
[»] scaffold0021 (1 HSPs)
scaffold0021 (137-196)||(141823-141882)
[»] scaffold0664 (1 HSPs)
scaffold0664 (127-181)||(2637-2691)
[»] scaffold0326 (2 HSPs)
scaffold0326 (129-179)||(5008-5058)
scaffold0326 (239-285)||(5108-5155)
[»] scaffold0266 (2 HSPs)
scaffold0266 (21-179)||(2424-2581)
scaffold0266 (127-179)||(23503-23555)
[»] scaffold0081 (1 HSPs)
scaffold0081 (129-179)||(55562-55612)
[»] scaffold0053 (2 HSPs)
scaffold0053 (129-179)||(72518-72568)
scaffold0053 (239-294)||(46443-46499)
[»] scaffold0003 (3 HSPs)
scaffold0003 (57-179)||(80713-80835)
scaffold0003 (127-179)||(98090-98142)
scaffold0003 (127-179)||(161128-161180)
[»] scaffold0025 (2 HSPs)
scaffold0025 (127-196)||(71580-71649)
scaffold0025 (128-179)||(77228-77279)
[»] scaffold1336 (1 HSPs)
scaffold1336 (127-179)||(371-423)
[»] scaffold0790 (1 HSPs)
scaffold0790 (127-179)||(4978-5030)
[»] scaffold0706 (1 HSPs)
scaffold0706 (127-179)||(2965-3017)
[»] scaffold0462 (1 HSPs)
scaffold0462 (127-179)||(8846-8898)
[»] scaffold0405 (2 HSPs)
scaffold0405 (127-179)||(2930-2982)
scaffold0405 (127-179)||(11632-11684)
[»] scaffold0253 (1 HSPs)
scaffold0253 (127-179)||(5770-5822)
[»] scaffold0207 (1 HSPs)
scaffold0207 (27-179)||(9176-9328)
[»] scaffold0205 (1 HSPs)
scaffold0205 (127-179)||(27748-27800)
[»] scaffold0201 (1 HSPs)
scaffold0201 (127-179)||(26805-26857)
[»] scaffold0192 (3 HSPs)
scaffold0192 (27-179)||(21351-21503)
scaffold0192 (127-179)||(32018-32070)
scaffold0192 (133-179)||(7099-7145)
[»] scaffold0190 (1 HSPs)
scaffold0190 (127-179)||(19755-19807)
[»] scaffold0173 (1 HSPs)
scaffold0173 (127-179)||(1851-1903)
[»] scaffold0167 (1 HSPs)
scaffold0167 (127-179)||(7427-7479)
[»] scaffold0124 (2 HSPs)
scaffold0124 (127-179)||(9738-9790)
scaffold0124 (127-179)||(45409-45461)
[»] scaffold0121 (1 HSPs)
scaffold0121 (127-179)||(9751-9803)
[»] scaffold0114 (2 HSPs)
scaffold0114 (127-179)||(47477-47529)
scaffold0114 (127-179)||(42438-42490)
[»] scaffold0102 (3 HSPs)
scaffold0102 (127-179)||(30317-30369)
scaffold0102 (127-179)||(38911-38963)
scaffold0102 (127-179)||(44982-45034)
[»] scaffold0096 (1 HSPs)
scaffold0096 (127-179)||(3382-3434)
[»] scaffold0017 (1 HSPs)
scaffold0017 (127-179)||(2581-2633)
[»] scaffold0007 (1 HSPs)
scaffold0007 (127-179)||(207348-207400)
[»] scaffold0924 (1 HSPs)
scaffold0924 (56-179)||(2749-2872)
[»] scaffold0635 (1 HSPs)
scaffold0635 (405-548)||(6995-7137)
[»] scaffold0586 (1 HSPs)
scaffold0586 (492-551)||(1725-1784)
[»] scaffold0023 (2 HSPs)
scaffold0023 (132-179)||(152973-153020)
scaffold0023 (127-179)||(20125-20177)
[»] scaffold1290 (1 HSPs)
scaffold1290 (127-177)||(885-935)
[»] scaffold0923 (1 HSPs)
scaffold0923 (129-179)||(334-384)
[»] scaffold0420 (1 HSPs)
scaffold0420 (398-476)||(4558-4636)
[»] scaffold0377 (2 HSPs)
scaffold0377 (127-180)||(3699-3752)
scaffold0377 (127-180)||(7738-7791)
[»] scaffold0342 (1 HSPs)
scaffold0342 (127-196)||(16496-16565)
[»] scaffold0026 (2 HSPs)
scaffold0026 (127-176)||(143174-143223)
scaffold0026 (127-179)||(62831-62883)
[»] scaffold0015 (1 HSPs)
scaffold0015 (134-179)||(171435-171480)
[»] scaffold0555 (1 HSPs)
scaffold0555 (127-171)||(1894-1938)
[»] scaffold0516 (1 HSPs)
scaffold0516 (127-179)||(6658-6710)
[»] scaffold0334 (1 HSPs)
scaffold0334 (127-179)||(8956-9008)
[»] scaffold0322 (1 HSPs)
scaffold0322 (400-480)||(19575-19655)
[»] scaffold0261 (1 HSPs)
scaffold0261 (127-175)||(8893-8941)
[»] scaffold0243 (1 HSPs)
scaffold0243 (127-179)||(11950-12002)
[»] scaffold0239 (1 HSPs)
scaffold0239 (127-179)||(14106-14158)
[»] scaffold0178 (1 HSPs)
scaffold0178 (127-179)||(25942-25994)
[»] scaffold0120 (1 HSPs)
scaffold0120 (127-179)||(4678-4730)
[»] scaffold0106 (3 HSPs)
scaffold0106 (127-179)||(46376-46428)
scaffold0106 (127-179)||(50649-50701)
scaffold0106 (398-464)||(36481-36547)
[»] scaffold0097 (1 HSPs)
scaffold0097 (127-179)||(28350-28402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (127-179)||(17053-17105)
[»] scaffold0074 (1 HSPs)
scaffold0074 (127-179)||(20680-20732)
[»] scaffold0072 (1 HSPs)
scaffold0072 (127-179)||(56371-56423)
[»] scaffold0071 (1 HSPs)
scaffold0071 (127-179)||(50579-50631)
[»] scaffold0022 (2 HSPs)
scaffold0022 (127-179)||(38284-38336)
scaffold0022 (127-179)||(136344-136396)
[»] scaffold0010 (2 HSPs)
scaffold0010 (132-179)||(43738-43785)
scaffold0010 (132-179)||(48804-48851)
[»] scaffold0430 (1 HSPs)
scaffold0430 (138-196)||(14192-14250)
[»] scaffold0076 (1 HSPs)
scaffold0076 (127-196)||(51316-51386)
[»] scaffold0669 (1 HSPs)
scaffold0669 (65-178)||(1273-1386)
[»] scaffold0575 (1 HSPs)
scaffold0575 (403-548)||(8805-8949)
[»] scaffold0335 (1 HSPs)
scaffold0335 (391-480)||(8223-8312)
[»] scaffold0211 (1 HSPs)
scaffold0211 (130-179)||(9842-9891)
[»] scaffold0104 (1 HSPs)
scaffold0104 (127-179)||(41274-41327)
[»] scaffold0089 (1 HSPs)
scaffold0089 (403-480)||(2223-2300)
[»] scaffold0065 (1 HSPs)
scaffold0065 (127-196)||(27383-27452)
[»] scaffold1584 (1 HSPs)
scaffold1584 (127-179)||(830-882)
[»] scaffold0574 (1 HSPs)
scaffold0574 (127-179)||(5518-5570)
[»] scaffold0348 (1 HSPs)
scaffold0348 (127-179)||(15122-15174)
[»] scaffold0220 (1 HSPs)
scaffold0220 (127-179)||(10868-10920)
[»] scaffold0049 (2 HSPs)
scaffold0049 (127-179)||(42551-42603)
scaffold0049 (127-179)||(53246-53298)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-179)||(370885-370937)
[»] scaffold0063 (2 HSPs)
scaffold0063 (128-179)||(24726-24777)
scaffold0063 (129-179)||(14525-14575)
[»] scaffold0402 (1 HSPs)
scaffold0402 (127-165)||(15456-15494)
[»] scaffold0057 (1 HSPs)
scaffold0057 (398-480)||(1792-1873)
[»] scaffold0037 (1 HSPs)
scaffold0037 (127-177)||(101300-101350)
[»] scaffold0947 (1 HSPs)
scaffold0947 (127-168)||(3787-3828)
[»] scaffold0672 (1 HSPs)
scaffold0672 (403-480)||(8258-8335)
[»] scaffold0323 (1 HSPs)
scaffold0323 (127-196)||(7740-7809)
[»] scaffold0297 (1 HSPs)
scaffold0297 (127-179)||(1386-1438)
[»] scaffold0249 (1 HSPs)
scaffold0249 (127-179)||(6397-6449)
[»] scaffold0158 (1 HSPs)
scaffold0158 (127-179)||(14904-14956)
[»] scaffold0060 (1 HSPs)
scaffold0060 (127-179)||(41703-41755)


Alignment Details
Target: chr7 (Bit Score: 405; Significance: 0; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 11 - 551
Target Start/End: Original strand, 13849272 - 13849812
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | |||||||||  ||||| ||||    
T  13849272 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggttaagtttttag 13849371  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||| | ||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||    
T  13849372 atcaaaaagaggattagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactctcgagagcagcaattttctgctcgccacggcgaacgactt 13849471  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaa 310  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||     
T  13849472 actcgccatagcgagtagcccatttcattgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaagccgtatttgtgttttac 13849571  T
Q  311 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct 410  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  13849572 gtactgttgggttggattctttgggtagaacaaataattatgataaattatgttattttactagagctgttgatttgaatatgattgattgttgaatgct 13849671  T
Q  411 gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||    
T  13849672 gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcacgagttgaccatgttgaggtgtaaggcat 13849771  T
Q  511 atttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  13849772 atttaaatatgcattgttgagtagtagttgtcgttgtccat 13849812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 11 - 551
Target Start/End: Complemental strand, 16573931 - 16573391
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | ||||||||| |||||| ||||    
T  16573931 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggtcaagtttttag 16573832  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    || |||||| | ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || ||    
T  16573831 ataaaaaagaggattagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcaacaattttctactcgccacgacgaatgactt 16573732  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaa 310  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| || |||||||||     
T  16573731 actcgccatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacaggcgctgaagccgtatttgtgttttac 16573632  T
Q  311 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct 410  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||| |||||||| |||||||||||| || |    
T  16573631 gtactgttcggttggattctttgggtagaacaaataattatgataaattatgttattttactagagttgttgacttgaatataattgattgttgaatgtt 16573532  T
Q  411 gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat 510  Q
    ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||    
T  16573531 gatctatgcgtaattgcatataaatagaatatacaagttgttggattccattgtcaaaagttgttgcgtcacgagttgaccatgttgaggtgtaagacat 16573432  T
Q  511 atttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  16573431 atttaaatatgcactgttgagtagtagttgtcgttgtccat 16573391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 11 - 551
Target Start/End: Original strand, 16591731 - 16592271
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | ||||||||| |||||| ||||    
T  16591731 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggtcaagtttttag 16591830  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    || |||||| | ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || ||    
T  16591831 ataaaaaagaggattagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcaacaattttctactcgccacgacgaatgactt 16591930  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaa 310  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| || |||||||||     
T  16591931 actcgccatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacaggcgctgaagccgtatttgtgttttac 16592030  T
Q  311 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct 410  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||| |||||||| |||||||||||| || |    
T  16592031 gtactgttcggttggattctttgggtagaacaaataattatgataaattatgttattttactagagttgttgacttgaatataattgattgttgaatgtt 16592130  T
Q  411 gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat 510  Q
    ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||    
T  16592131 gatctatgcgtaattgcatataaatagaatatacaagttgttggattccattgtcaaaagttgttgcgtcacgagttgaccatgttgaggtgtaagacat 16592230  T
Q  511 atttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  16592231 atttaaatatgcactgttgagtagtagttgtcgttgtccat 16592271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 29 - 551
Target Start/End: Complemental strand, 7529797 - 7529275
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| ||||||||||| || | |||  ||||||| ||||||||||| || |  | | ||| |||||||||||||||| ||||||||||||| | ||| ||    
T  7529797 ttttcaaaatgttgttatatgacgtgagttggatggttttgagtgcttggatgtttttagagaggactgggcaagtttttagatcaaaaagaggattagg 7529698  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||| || |||||||||||||||| ||||| | |||||||| |||||||||||    
T  7529697 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagcaccatttttctgctcgccacgctgaacaacttactcgccatagcgagtag 7529598  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggttggat 327  Q
    ||| ||| ||  |||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| || || |||||  ||||||||||| ||||     
T  7529597 ccctttttctgaagctcgccatagcgagcagtgcactcgcctggcgagttgcacaatggctgagagccgtatttgcgttttgtgtactgttgggctggaa 7529498  T
Q  328 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 427  Q
    || ||||||| | ||||||||| ||||||||||| |||||||| | ||| || |||||||||||| | |||||||||||||  |||||||| ||||||||    
T  7529497 tc-ttgggtatattaaataattctgattaattatattattttatcagagttgctgatttgaatataaatgattgttgattgtggatttatgtataattgc 7529399  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    || |||||| | |||||||||||||| ||||||||||| || |||||||||| || ||||||||||||||| ||||||   ||||||| ||||||| |||    
T  7529398 atgtaaataaattatacaagttgttgaattccattgtcgaaggttgttgtgttgctagttgaccatgttgatgtgtaaatcatatttatatatgcactgt 7529299  T
Q  528 tgagtagtagttgttgatgtccat 551  Q
    || ||||||| ||| | |||||||    
T  7529298 tgtgtagtagatgtcgttgtccat 7529275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 29 - 523
Target Start/End: Original strand, 39995221 - 39995714
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||||||||||||||| ||||  ||  ||||||| ||||||| |||||| |  | | ||| |||||||| |||| || |||||| ||||||   ||| ||    
T  39995221 tttttaaaatgttgttataggatgtgagttggatggttttgactgcctggatgtttctagagaggactgagcaaatttttagataaaaaagatgattagg 39995320  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagca-attttctgctcgccacggtgaacgaattactcgctatagcgagta 227  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||  |  |||||||||||| |||| |||| | |||||||| | ||||||||    
T  39995321 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcactattttttctgctcgcgacggcgaacaacttactcgccagagcgagta 39995420  T
Q  228 gcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggttgga 326  Q
    ||||||||  |||||||||||||||||||||| |||||  |   ||||||||| ||||||||||  ||||||| ||   ||| ||||||||| || ||||    
T  39995421 gcccattttattgagctcgccatagcgagcagagcactaaccccgcgagttgctcagtggctgagggccgcatttg-catttgagtactgttaggctgga 39995519  T
Q  327 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattg 426  Q
     || ||||||| | ||||||||  ||||||||||  |||  ||| | ||| || |||||||||||||| ||||| |||||||  |||||||| ||| |||    
T  39995520 atc-ttgggtatattaaataatcctgattaattacatta-cttatcagagttgctgatttgaatatgaatgattattgattgtggatttatgtatatttg 39995617  T
Q  427 catttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 523  Q
     || |||||| | |||||||||||||| |||  |||||| || |||||||||||    || ||||||||||| |||||||  ||||||| |||||||    
T  39995618 tatgtaaataaattatacaagttgttgaattatattgtcgaaggttgttgtgtcattggtcgaccatgttgatgtgtaagtcatatttatatatgca 39995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 330 - 551
Target Start/End: Original strand, 7507205 - 7507427
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 428  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||| ||||| |||  ||||||||    
T  7507205 tttgggtagaataaataattatgattaattatgttatttttaccagagctgttgatttgaatatgatggattgttgattgttgattcatgtgtaattgca 7507304  T
Q  429 tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgtt 528  Q
    |||||||| ||| |||||  | ||| || ||||||||||||||| ||||||| | |||||| ||||||||||||||||  ||||||||||||||| ||||    
T  7507305 tttaaataaaatgtacaaagtattgaatgccattgtcaaaagtttttgtgtcacaagttgatcatgttgaggtgtaagtcatatttaaatatgcactgtt 7507404  T
Q  529 gagtagtagttgttgatgtccat 551  Q
    |  |||||| ||||| |||||||    
T  7507405 gtatagtagatgttgttgtccat 7507427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 127 - 541
Target Start/End: Complemental strand, 15690508 - 15690106
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  15690508 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagcaccatttttcctgctcgccacg----------tactcgccatagcgag 15690419  T
Q  226 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtt-ttaagtactgttgggtt 323  Q
    || | |||||| ||||| |||||||||||||||| |||||||||| |||||||||| ||||  |||||||||  ||| |||  || |||| |||||| ||    
T  15690418 taactcatttc-ttgagttcgccatagcgagcagatgcactcgcgaggcgagttgctcagtacctgaagccgtttctatgtaattgagtattgttgg-tt 15690321  T
Q  324 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 423  Q
    | ||| |||| |||| | || || |||||||||||| |||||||||||| |||||||||| || | ||||||  ||||||||||||||  ||||| |||     
T  15690320 gaatt-tttgtgtaggacaa-tagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatat 15690225  T
Q  424 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatg 521  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||| ||| ||   || ||||  ||||| ||||||||  |||||  || |||||    
T  15690224 ttatatttaaataaattatacaagttgttgaatttcatt-tcaaaggttgatgtatcattagatgactctgttgtggtgtaagtcatattcatatatatg 15690126  T
Q  522 cattgttgagtagtagttgt 541  Q
    || |||||||||| ||||||    
T  15690125 cactgttgagtagcagttgt 15690106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 127 - 541
Target Start/End: Complemental strand, 15698101 - 15697699
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  15698101 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagcaccatttttcctgctcgccacg----------tactcgccatagcgag 15698012  T
Q  226 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtt-ttaagtactgttgggtt 323  Q
    || | |||||| ||||| |||||||||||||||| |||||||||| |||||||||| ||||  |||||||||  ||| |||  || |||| |||||| ||    
T  15698011 taactcatttc-ttgagttcgccatagcgagcagatgcactcgcgaggcgagttgctcagtacctgaagccgtttctatgtaattgagtattgttgg-tt 15697914  T
Q  324 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 423  Q
    | ||| |||| |||| | || || |||||||||||| |||||||||||| |||||||||| || | ||||||  ||||||||||||||  ||||| |||     
T  15697913 gaatt-tttgtgtaggacaa-tagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatat 15697818  T
Q  424 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatg 521  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||| ||| ||   || ||||  ||||| ||||||||  |||||  || |||||    
T  15697817 ttatatttaaataaattatacaagttgttgaatttcatt-tcaaaggttgatgtatcattagatgactctgttgtggtgtaagtcatattcatatatatg 15697719  T
Q  522 cattgttgagtagtagttgt 541  Q
    || |||||||||| ||||||    
T  15697718 cactgttgagtagcagttgt 15697699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 12201456 - 12201721
Alignment:
Q  17 gagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaa 116  Q
    |||||| | ||| ||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| |||    
T  12201456 gagaaatcatgaattttaaattgttgttataagatgtaagttggatggttttgagtgcctggatgtttttagagaggactggggcaattttcagattaaa 12201555  T
Q  117 aagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcg 215  Q
    |||   |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||    
T  12201556 aagatgattggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcg 12201645  T
Q  216 ctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 291  Q
    | |||||||||||| ||||| |||||| ||||||||| |||| | ||||||||| | ||||||||| |||| |||||    
T  12201646 ccatagcgagtagctcattt-cttgagttcgccatagtgagcaaatgcactcgcctcgcgagttgctcagtagctga 12201721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 12208061 - 12208326
Alignment:
Q  17 gagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaa 116  Q
    |||||| | ||| ||||||| ||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| |||    
T  12208061 gagaaatcatgaattttaaattgttgttataagacgtaagttggatggttttgagtgcctggatgtttttagagaggactggggcaattttcagattaaa 12208160  T
Q  117 aagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcg 215  Q
    |||   ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||    
T  12208161 aagatgattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcg 12208250  T
Q  216 ctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 291  Q
    | |||||||||||| ||||| |||||| |||||||||||||| | ||||||||| | || |||||| |||| |||||    
T  12208251 ccatagcgagtagctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcaagttgctcagtagctga 12208326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 7506913 - 7507078
Alignment:
Q  34 aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa--ttggggag 131  Q
    ||||||| ||| |||| |||  ||||||| | |||| ||||||||| || ||| | |||||||||||||||| || ||| |||||   ||  || |||||    
T  7506913 aaaatgtcgttataggacgtgggttggatgggtttgggtgcctgaatatatatggagaggactgggcaagtttttggataaaaaacaaaagattagggag 7507012  T
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 197  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| | |||| ||||||||||    
T  7507013 cttaaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcaactatttcctgctcgcca 7507078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 15731648 - 15731734
Alignment:
Q  465 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||| |||||||    
T  15731648 caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgcactgttgagtagtagatgttgttgtccat 15731734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 536
Target Start/End: Complemental strand, 15725824 - 15725636
Alignment:
Q  351 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 449  Q
    |||||||||||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||| || | |||| || |||  ||||||||| | |||| |||||    
T  15725824 tgattaattatgttgtttctaccagagttgttgatttgattatggttgattattgattgttgttctatgtatgattatatttaaataaattataaaagtt 15725725  T
Q  450 gttggattccattgt--caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagta 536  Q
    |||| ||  ||||||  |||||||||||||||| | || |||| ||||||| |||||||  ||||||||||||||| ||||| ||||||    
T  15725724 gttgaatgtcattgtaacaaaagttgttgtgtcacaagatgacaatgttgaagtgtaagtcatatttaaatatgcagtgttgtgtagta 15725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 14039293 - 14039170
Alignment:
Q  56 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 155  Q
    ||||||| |||||||||||| |||  | | ||| ||||||||||  | || |||||| ||||||  |||| || ||||||||||||| ||||||| ||||    
T  14039293 gttggatagttttgagtgcccgaatgtttttagagaggactgggataatttttagattaaaaagataattaggaagcttaaaaatgaagatttagtgaga 14039194  T
Q  156 aaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||||||||||    
T  14039193 aaaatgtcaaaactcccgagagca 14039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 14349323 - 14349200
Alignment:
Q  56 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 155  Q
    ||||||| |||||||||||| |||  | | ||| ||||||||||  | || |||||| ||||||  |||| || ||||||||||||| ||||||| ||||    
T  14349323 gttggatagttttgagtgcccgaatgtttttagagaggactgggataatttttagattaaaaagataattaggaagcttaaaaatgaagatttagtgaga 14349224  T
Q  156 aaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||||||||||    
T  14349223 aaaatgtcaaaactcccgagagca 14349200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 403 - 548
Target Start/End: Complemental strand, 42041711 - 42041567
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg 502  Q
    |||||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||||| || |||||||||||   ||||||||||||||| | |    
T  42041711 tgattgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc-atagttgaccatgttgatgag 42041613  T
Q  503 taagatatatttaaatatgcattgttgagtagtagttgttgatgtc 548  Q
    ||||  ||||| | ||||||||||||| |||| |||||||| ||||    
T  42041612 taagtcatattcatatatgcattgttgtgtagcagttgttgttgtc 42041567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 15103949 - 15104007
Alignment:
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15103949 gaataggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15104007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 81690 - 81742
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  81690 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 81742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 12800902 - 12800954
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12800902 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12800954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16187342 - 16187394
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16187342 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 16187394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16475749 - 16475801
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  16475749 gggagcttaaaaatgaggatttagtgagaaaaatttcaaaactcccgagagca 16475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18009853 - 18009801
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18009853 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18009801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23442750 - 23442698
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  23442750 gggagcttaaaaatgaggatttagtgggaaaaatgtcaaaactcccgagagca 23442698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 15339379 - 15339320
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  15339379 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 15339320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 15710618 - 15710677
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  15710618 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 15710677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 16668012 - 16668127
Alignment:
Q  64 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 163  Q
    |||||||||| |||||  | | ||| ||||||||||  | || |||||| ||||||   ||| |||| ||||||||||| ||||||| ||||||||||||    
T  16668012 gttttgagtgtctgaatgtttttagagaggactgggacaatttttagattaaaaagatgattagggaacttaaaaatgaagatttagtgagaaaaatgtc 16668111  T
Q  164 aaaactcccgagagca 179  Q
    ||||||||||||||||    
T  16668112 aaaactcccgagagca 16668127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 17642382 - 17642497
Alignment:
Q  64 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 163  Q
    |||||||||| |||||  | | ||| ||||||||||  | || |||||| ||||||   ||| |||| ||||||||||| ||||||| ||||||||||||    
T  17642382 gttttgagtgtctgaatgtttttagagaggactgggacaatttttagattaaaaagatgattagggaacttaaaaatgaagatttagtgagaaaaatgtc 17642481  T
Q  164 aaaactcccgagagca 179  Q
    ||||||||||||||||    
T  17642482 aaaactcccgagagca 17642497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 46681807 - 46681858
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46681807 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46681858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 14250147 - 14250209
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||| || ||||||    
T  14250147 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagcaccatttttct 14250209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 296
Target Start/End: Original strand, 21518787 - 21518945
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagta 227  Q
    |||||||||| ||| ||||||| |||||||||||||||||||| ||||||| || ||||| |||||||||||          ||||||| ||||||||||    
T  21518787 gagcttaaaattgaagatttagtgagaaaaatgtcaaaactcctgagagcaccatttttcttgctcgccacg----------tactcgccatagcgagta 21518876  T
Q  228 gcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccg 296  Q
     ||||||| |||||| | ||||||||||| || || ||||||| || ||||||| ||||  |||||||||    
T  21518877 acccattt-cttgagtttgccatagcgagtagatgtactcgcgaggtgagttgctcagtacctgaagccg 21518945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 12554999 - 12554950
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 178  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12554999 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 12554950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 13318247 - 13318195
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  13318247 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 13318195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14169144 - 14169196
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  14169144 gggagcttcaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14169196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14173391 - 14173443
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  14173391 gggagcttcaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14173443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14581171 - 14581223
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  14581171 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactccctagagca 14581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15097578 - 15097630
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15097578 gggagcctaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15097630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15437183 - 15437235
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  15437183 gggagcttaaaaatgaagatttagtgagaaaaatgtcagaactcccgagagca 15437235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16073583 - 16073635
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  16073583 gggagcttaaaaatgaagatttagtaagaaaaatgtcaaaactcccgagagca 16073635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 46348366 - 46348418
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46348366 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 3328348 - 3328301
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3328348 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3328301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 12695146 - 12695099
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12695146 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12695099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 14265509 - 14265667
Alignment:
Q  21 aaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg 120  Q
    |||||||||||||||| ||||||| || |   || ||||| | |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||     
T  14265509 aaccttgatttttaaattgttgttataaggtataagttggttagttttgagtgcctggatgtttctagagaggactgggacaattttcagattaaaaaga 14265608  T
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
      | | |||||||||||||||| |  |||| ||||||||||||||||||||||||||||    
T  14265609 tgaatagggagcttaaaaatgaagtattagtgagaaaaatgtcaaaactcccgagagca 14265667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 35366289 - 35366213
Alignment:
Q  376 gctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttgg 454  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||| || ||||||||||||| ||||||    
T  35366289 gctgttgatt-gaatatgattg-ttgatgattgctggtttatgcttaattgcattcaattagaatatacaaggtgttgg 35366213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 45185998 - 45185948
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45185998 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 45185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 6412391 - 6412322
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||| |||||||||  ||||||| |||||    
T  6412391 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcctgagagcagcttttttctgttcgcc 6412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11857316 - 11857368
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | |||||||    
T  11857316 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttctgagagca 11857368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 13020226 - 13020182
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  13020226 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 13020182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15722825 - 15722877
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  15722825 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 15722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17182324 - 17182376
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  17182324 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 17182376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19146123 - 19146071
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  19146123 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactcccgagagca 19146071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19600412 - 19600360
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  19600412 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 19600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20745522 - 20745470
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  20745522 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactcccgagagca 20745470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 35962346 - 35962398
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  35962346 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 35962398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 19152476 - 19152354
Alignment:
Q  57 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 156  Q
    |||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | ||||| |||||||||| | | ||| |||||    
T  19152476 ttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagtttaaaaatgaagttctagtgagaa 19152377  T
Q  157 aaatgtcaaaactcccgagagca 179  Q
    ||||||||||| |||||||||||    
T  19152376 aaatgtcaaaaatcccgagagca 19152354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 20751875 - 20751753
Alignment:
Q  57 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 156  Q
    |||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | ||||| |||||||||| | | ||| |||||    
T  20751875 ttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagtttaaaaatgaagttctagtgagaa 20751776  T
Q  157 aaatgtcaaaactcccgagagca 179  Q
    ||||||||||| |||||||||||    
T  20751775 aaatgtcaaaaatcccgagagca 20751753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 11219736 - 11219781
Alignment:
Q  134 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||    
T  11219736 taaaaatgagattttagtgagaaaaatgtcaaaactcccgagagca 11219781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14281266 - 14281318
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||  ||||||||||||||||||||||||||||    
T  14281266 gggagcttagaattgatgatttaatgagaaaaatgtcaaaactcccgagagca 14281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 15085552 - 15085587
Alignment:
Q  146 tttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15085552 tttagtgagaaaaatgtcaaaactcccgagagcagc 15085587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 18009751 - 18009704
Alignment:
Q  239 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  18009751 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 18009704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 10520366 - 10520316
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||| ||||||| | |||||||||||||| | |||||||||    
T  10520366 gagcttaaaaatgaagatttagtgtgaaaaatgtcaaaaattccgagagca 10520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 21518684 - 21518734
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcct 76  Q
    ||||||||||||||||||| || | |||| ||||||| |||||||||||||    
T  21518684 tgatttttaaaatgttgttataaggcgtaagttggatggttttgagtgcct 21518734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 41782876 - 41782938
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg 453  Q
    |||| |||| |||||||| ||||||||| |||||| |||||||| | | ||||||||||||||    
T  41782876 atgaatgatggttgattgttgatttatgtataatttcatttaaacaaattatacaagttgttg 41782938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 7507092 - 7507133
Alignment:
Q  234 ttccttgagctcgccatagcgagcagtgcactcgcgtggcga 275  Q
    |||||| ||||||||||| |||||||||||||||| ||||||    
T  7507092 ttccttcagctcgccataccgagcagtgcactcgcctggcga 7507133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 14945501 - 14945534
Alignment:
Q  146 tttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||| ||||||||||||||||||||||||||||    
T  14945501 tttagtgagaaaaatgtcaaaactcccgagagca 14945534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 15373094 - 15373127
Alignment:
Q  146 tttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||| ||||||||||||||||||||||||||||    
T  15373094 tttagtgagaaaaatgtcaaaactcccgagagca 15373127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 15731595 - 15731644
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaat 440  Q
    |||||||||||||||||| ||| ||||| || |||| |||||||||||||    
T  15731595 atgattgattgttgattgttgaattatgtatgattgtatttaaatagaat 15731644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 37243929 - 37243962
Alignment:
Q  146 tttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||| ||||||||||||||||||||||||||||    
T  37243929 tttagtgagaaaaatgtcaaaactcccgagagca 37243962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 15142763 - 15142711
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| | ||||| |||||||||||||||||| || ||||||    
T  15142763 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaacttccaagagca 15142711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 15731320 - 15731368
Alignment:
Q  100 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggattt 148  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||    
T  15731320 caagtttttggatcaaaaagggaattaggaagcttaaaaatggggattt 15731368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 15839128 - 15839076
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  15839128 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 15839076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 46348450 - 46348510
Alignment:
Q  221 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    ||||| ||||||||| |||| ||||||||||||||| || || ||||||| ||||||||||    
T  46348450 gcgagcagcccattttcttgtgctcgccatagcgagtagatgtactcgcgaggcgagttgc 46348510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 376; Significance: 0; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 12 - 551
Target Start/End: Complemental strand, 43112714 - 43112175
Alignment:
Q  12 agagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttaga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |  | ||| | ||||||||| |||||| |||||    
T  43112714 agagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctagatgtttatggagaggactggtcaagtttttaga 43112615  T
Q  112 tcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatta 211  Q
    |||||||| | ||| ||||||||| ||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||    
T  43112614 tcaaaaagaggattagggagcttagaaatgaggatttagtaagaaaaatgtcaaaactttcgagagcagcaattttctgctcgccacggtgaacgactta 43112515  T
Q  212 ctcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaag 311  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||| |    
T  43112514 ctcgccatagcgagtagcccatttccatgagcttgccatagcgagcagtgcactcacctggcgagttgcacagtggctgaagccgtatttgtgttttacg 43112415  T
Q  312 tactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctg 411  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||    
T  43112414 tactgttgggttggattctttggatagaacaaataattatgataaattatgttattttactagagctgttgatttgaatatgattgattgttgaatgctg 43112315  T
Q  412 atttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatata 511  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||    
T  43112314 atttatgcataatttcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcacgagttaaccatgttgaggtgtaagacata 43112215  T
Q  512 tttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||| |||||| |||||||||| | |||||||    
T  43112214 tttaaatatgcactgttgaatagtagttgtcgttgtccat 43112175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 35 - 343
Target Start/End: Complemental strand, 20387169 - 20386863
Alignment:
Q  35 aaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagctt 134  Q
    |||||||||| |||| |||  ||||||| |||||||||||||  | |||||||| ||||| |||||||||| || |||||||| |||| || ||||||||    
T  20387169 aaatgttgttataggacgtgggttggatggttttgagtgcctagatatgtatagagaggattgggcaagtttttggatcaaaagggga-ttagggagctt 20387071  T
Q  135 aaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatt 234  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||| ||  || |||||||| || ||||||||||||||    
T  20387070 aaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcagctattttctgctctccacggcgagtgacttactcgccatcgcgagtagcccatt 20386971  T
Q  235 tccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaagtactgttgggttggattctttgg 334  Q
    | ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  20386970 ttcttcagctcgccatagcgagcagtgcacttgcctggcgagttgcacagtggctgaagccgcatctgtgttttgtgtactgttgggttggattc-ttgg 20386872  T
Q  335 gtagaataa 343  Q
    |||||||||    
T  20386871 gtagaataa 20386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 11 - 551
Target Start/End: Original strand, 15003465 - 15004006
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||| || ||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||    
T  15003465 cagagaaaggaactttgatttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttag 15003564  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||| | ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | ||    
T  15003565 atcaaaaagaggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaactt 15003664  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtttta 309  Q
    | |||| ||||||||||||| |||| |||||| ||||| |||||||||  ||||||||| |  |||||| | |||| ||||||| ||||||||||||||     
T  15003665 aatcgccatagcgagtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcacgagttactcagtagctgaagtcgcatctgtgttttt 15003763  T
Q  310 -agtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg 408  Q
     | || |||  |||||||||||  | |||| | |||| |||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||| |||    
T  15003764 gaatattgtgtggttggattctc-gtgtaggacaaatgattatgattaattatgctattttaccaaagctgttgagttgaatatgattgattgttgtttg 15003862  T
Q  409 ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaaga 507  Q
     || || ||| ||| ||  ||||||||| | |||||||| | ||| || || |||| |||| ||||||||||| | | ||||| |||||||||||||||     
T  15003863 ttgtttgatgtatatttatatttaaataaattatacaagattttgaataccgttgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaagt 15003962  T
Q  508 tatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
     ||   |||||||||  ||||| |||||||  |||| |||||||    
T  15003963 catgaataaatatgcgctgttgtgtagtaggagttgctgtccat 15004006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 17 - 543
Target Start/End: Complemental strand, 22617316 - 22616791
Alignment:
Q  17 gagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaa 116  Q
    |||||| | ||||||||||||||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||| | || |||||| |||    
T  22617316 gagaaatcatgatttttaaaatgttgttataagacgtaagttggatggttttgagtgcctggattttt-tagagaggactgggccaatttttagattaaa 22617218  T
Q  117 aagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcg 215  Q
    ||| || || |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| |||| | |||||||    
T  22617217 aagtga-ttagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcctgctcgccacggcgaacaacttactcg 22617119  T
Q  216 ctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttaagta 313  Q
    | ||||||||||||| |||| |||||| ||||||||||||||| ||||||||| |||||| ||||| ||||||||| |||||||| ||   ||||  |||    
T  22617118 ccatagcgagtagcctattttcttgagttcgccatagcgagcaatgcactcgcctggcgaattgcatagtggctgagagccgcatttgcatttttgtgta 22617019  T
Q  314 ctgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgat 413  Q
    |||||||| |||| || ||||||| |||  |||||  |||||||||||   |||||| | ||| |  ||||||| |||||| |||||  ||||||  |||    
T  22617018 ctgttgggctggaatc-ttgggtataat-gataatcctgattaattataacattttatcagagtttctgatttgcatatgaatgattactgattgtggat 22616921  T
Q  414 ttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt 513  Q
    ||  | ||||||| || |||||| | |||||||||||||| |||||| |||  || ||||  |||| || |||||||| |||||| |  ||||  |||||    
T  22616920 ttgagtataattgtatgtaaataaattatacaagttgttgaattccaatgttgaatgttgcggtgttgctagttgaccttgttgatgcataagtcatatt 22616821  T
Q  514 taaatatgcattgttgagtagtagttgttg 543  Q
    || |||||||||| || ||||||| |||||    
T  22616820 tatatatgcattgatgtgtagtagatgttg 22616791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 339 - 551
Target Start/End: Complemental strand, 20385567 - 20385355
Alignment:
Q  339 aataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaataga 438  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |||| |    
T  20385567 aataaataattatgattaattatgttattttaccagagctgttgatttgaatatgattgattgttgattgttgatttatgtataattgcatt--aataaa 20385470  T
Q  439 atatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatata-tttaaatatgcattgttgagtagta 536  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||  ||||||||||||  ||| |||||||||||| ||||| ||||||    
T  20385469 atatacaaagttgttgaattccattgtcgaaagttgttgtgtcacgagttgaccacattgaggtgtaagtcatattttaaatatgcactgttgtgtagta 20385370  T
Q  537 gttgttgatgtccat 551  Q
    | ||| |||||||||    
T  20385369 gatgtcgatgtccat 20385355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 330 - 551
Target Start/End: Original strand, 22434314 - 22434529
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 428  Q
    ||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||       |||| |||||| ||    
T  22434314 tttgggtagaataaataattatgattaattatgctatttttactagagctgttgatttgaatatgattgattgttgatt-------tatgtataattaca 22434406  T
Q  429 tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgtt 528  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||| | ||||    
T  22434407 tttaaataaaatatacaagttgttgaatgccattgtcaaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgtactgtt 22434506  T
Q  529 gagtagtagttgttgatgtccat 551  Q
    |  |||||| ||||| |||||||    
T  22434507 gtatagtagatgttgttgtccat 22434529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 308
Target Start/End: Original strand, 22433987 - 22434275
Alignment:
Q  19 gaaaccttgattttt-aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaa 117  Q
    |||| |||||||||| ||||||| |||  ||| |||  ||||||| |||||| ||||||| | || ||||| |||||| ||||||||| || | ||||||    
T  22433987 gaaaacttgatttttcaaaatgtcgttacaggacgtgggttggatggttttgggtgcctggatatatatagagaggaccgggcaagtttttgg-tcaaaa 22434085  T
Q  118 agggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgct 217  Q
    |    ||| |||||||||||||||||||||||| | ||||||| |||||||||||||||||| | |||||||||||||||||  ||  || ||||||||     
T  22434086 aaaagattagggagcttaaaaatgaggatttagtgtgaaaaatatcaaaactcccgagagcaactattttctgctcgccacgacgagtgacttactcgcc 22434185  T
Q  218 atagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgag-ttgcacagtggctgaagccgcatctgtgtttt 308  Q
     |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||    
T  22434186 ctagcgagtag-ccatttccttgagctcgccatagcgagtagtgcactcgcctggcgagattgcacagtggctgatgccacat-tgtgtttt 22434275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 38 - 500
Target Start/End: Complemental strand, 15267848 - 15267399
Alignment:
Q  38 tgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaa 137  Q
    |||||||||| |  ||| ||||||| |||||||||||||| |  | | ||| |||||||| |  | || | |||| ||||||   ||| |||||||||||    
T  15267848 tgttgttttaagatgtaagttggatagttttgagtgcctggatgtttttagagaggactgagacaattttcagattaaaaagatgattagggagcttaaa 15267749  T
Q  138 aatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgagtagcccatttc 236  Q
    ||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||          |||||||||||||||||| | ||||||    
T  15267748 aatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgctatagcgagtaactcatttc 15267659  T
Q  237 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttgggttggattctttgg 334  Q
     ||||| |||||| | ||||||| |||||||||| |||||||||| ||||  |||||||||  ||| ||| ||| | || |||||| |||||||  |||     
T  15267658 -ttgagttcgccacaacgagcagatgcactcgcgaggcgagttgctcagtacctgaagccgtttctatgtatttgaatattgttgg-ttggatt--ttgt 15267563  T
Q  335 gtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaa 434  Q
    |||| | ||||| |||||||||||| |||||||||||| |||||||||| || | ||||||  ||||||||||||||  ||||| ||| ||  |||||||    
T  15267562 gtaggacaaatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaa 15267465  T
Q  435 tagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgagg 500  Q
    || | |||||||||||||| ||| |||| ||||| |||||||| ||   ||||||| |||||||||    
T  15267464 taaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagttgactatgttgagg 15267399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 26 - 295
Target Start/End: Original strand, 22920355 - 22920624
Alignment:
Q  26 tgatttttaaaatgttgtttt-aggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 124  Q
    ||||||||||||||||||||| ||||||| | |||||| ||||||| |||||  ||||||||||  |||||| |||||||| || |||||||||||| ||    
T  22920355 tgatttttaaaatgttgtttttaggtcgtgttttggatggttttgactgccttgacatgtatagaaaggactaggcaagtttttggatcaaaaaggggat 22920454  T
Q  125 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 224  Q
    | | ||||||||||||| |||||| | | |||||   || |||   |||||||||   | |||||||||||||||  |||| | ||||| || || ||||    
T  22920455 tagagagcttaaaaatggggatttggtgtgaaaataatc-aaatggccgagagcaagcagtttctgctcgccacgacgaacaacttacttgccatggcga 22920553  T
Q  225 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagcc 295  Q
     |  ||||||| |||||||| ||||||||||||||||| ||||| |||||| || | || |||||||||||    
T  22920554 atcacccattttcttgagctggccatagcgagcagtgctctcgcctggcgaatttctcaatggctgaagcc 22920624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 342 - 541
Target Start/End: Original strand, 22521607 - 22521805
Alignment:
Q  342 aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata 441  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||| || | ||||||  ||||||||||||||  ||||| ||||||  ||||||||| | ||    
T  22521607 aaatagttatgattaattatgttattt-accggagctattgaattaagtatgatgaattgttgattgctg--ttatgtataattatatttaaataaatta 22521703  T
Q  442 tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatgcattgttgagtagtagtt 539  Q
    |||||||||||| ||| |||| | ||| |||||||| ||   ||||||| |||||||||||||||  |||||  || |||||||||||||||||| ||||    
T  22521704 tacaagttgttgaatttcatttttaaaggttgttgtatcattagttgactatgttgaggtgtaagtcatattcatatatatgcattgttgagtagcagtt 22521803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 20011630 - 20011783
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  20011630 tgatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttagagaggactgggtcaatttttagattaaaaagatgaat 20011729  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
     |||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  20011730 agggagcttaaaaatgaagatttagtgagaaaaacgtcaaaactcccgagagca 20011783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 25624215 - 25624330
Alignment:
Q  64 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 163  Q
    ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||||| | ||||||||||||||||||    
T  25624215 gttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatgaagttttagggagaaaaatgtc 25624314  T
Q  164 aaaactcccgagagca 179  Q
    ||||||||||||||||    
T  25624315 aaaactcccgagagca 25624330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14594366 - 14594418
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14594366 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14594418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21683305 - 21683357
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21683305 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21683357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21687654 - 21687706
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21687654 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21690047 - 21690099
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21690047 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21690099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 23652600 - 23652652
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23652600 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23652652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20006796 - 20006744
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  20006796 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 20006744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21685697 - 21685749
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  21685697 gggagcttaaaaatgaatatttagtgagaaaaatgtcaaaactcccgagagca 21685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 36445377 - 36445429
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  36445377 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 36445429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 551
Target Start/End: Original strand, 21415417 - 21415476
Alignment:
Q  492 atgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||    
T  21415417 atgttgaggtgtaagacatatttaaatatgcactgttgggtaatagttgttgttgtccat 21415476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 20783482 - 20783536
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  20783482 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 20783536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 22175678 - 22175732
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||    
T  22175678 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagc 22175732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 20973646 - 20973691
Alignment:
Q  134 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20973646 taaaaatgaggttttagtgagaaaaatgtcaaaactcccgagagca 20973691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 20839551 - 20839603
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20839551 gggaacttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 20839603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 22063195 - 22063247
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22063195 gggagcttataattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22063247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 22744265 - 22744213
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  22744265 gggagcttaaaaatgaagttttattgagaaaaatgtcaaaactcccgagagca 22744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 33089439 - 33089387
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  33089439 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 33089387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 41009086 - 41009138
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  41009086 gggaacttaaaaatgaggttttagtgagaaaaatgtcaaaactccagagagca 41009138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 22178154 - 22178103
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 178  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||    
T  22178154 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagc 22178103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 23652674 - 23652749
Alignment:
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||| || || ||||||| |||||||||| ||||    
T  23652674 actcgccatagcgagtaacccattttcttgagttcgccatagcgagtagatgtactcgcgaggcgagttgcccagt 23652749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11392210 - 11392262
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  11392210 gggagcttataattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 11392262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 19989456 - 19989376
Alignment:
Q  400 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    ||||||||| ||| || || |||||| || ||||||| | ||||||| |||||||||| ||||||| || |||||||||||    
T  19989456 tgttgattgttgaattgtgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttgtgtc 19989376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 22025192 - 22025244
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||| ||||||||||||||||||||    
T  22025192 gggagcttagaattgatgatttagtgagaaaattgtcaaaactcccgagagca 22025244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 22050767 - 22050715
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| |||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22050767 gggaacttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22050715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 31412114 - 31412166
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  31412114 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 31412166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 31418296 - 31418348
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  31418296 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 31418348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 14594468 - 14594515
Alignment:
Q  239 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  14594468 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 14594515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 19987808 - 19987871
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 190  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||| ||| ||||  |||||||    
T  19987808 gggaacttaaaaatgaagatttagtgagaaaagtgtcaaaactcccaagaccagcctttttctg 19987871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 1264593 - 1264543
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||    
T  1264593 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagag 1264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 7301132 - 7301206
Alignment:
Q  378 tgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgtt 452  Q
    |||||| ||||||||||||   ||||||||| || ||||||||||| |||||| || |||| |||||||| ||||    
T  7301132 tgttgaattgaatatgatttgctgttgattgttggtttatgcataaatgcattcaattagattatacaagatgtt 7301206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 25624377 - 25624435
Alignment:
Q  237 cttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagc 294  Q
    ||||||||||||||||||||| | |||||||||| |||||||||| ||||  |||||||    
T  25624377 cttgagctcgccatagcgagcaaatgcactcgcgaggcgagttgcccagtatctgaagc 25624435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 19860081 - 19860012
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||||| ||||| | ||||||||||| || ||||| ||||||| |  ||||||| |||||    
T  19860081 gggagcttaaaaatgaagattttgtgagaaaaatgttaacactccagagagcaccctttttctgttcgcc 19860012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 480
Target Start/End: Original strand, 21861322 - 21861399
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    |||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | ||||||| || |||||||||||    
T  21861322 tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcgaaggttgttgtgtc 21861399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 480
Target Start/End: Original strand, 38185778 - 38185855
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    |||||| ||||||||| |||||| || | ||| | | ||||||||| |||||| | |||||||||| |||||||||||    
T  38185778 tgattgttgatttatgtataatttcactcaaacaaattatacaagtggttggaattcattgtcaaaggttgttgtgtc 38185855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 20973739 - 20973783
Alignment:
Q  237 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||    
T  20973739 cttgagctcgccatggcgagcagatgcactcgcgaggcgagttgc 20973783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 349; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 11 - 551
Target Start/End: Complemental strand, 23375605 - 23375067
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||    
T  23375605 cagagaaagaaactttgatttttaaaatgttgttttaggtcgtatgttggat-gttttgagtgcctagatgtttatggagaggactgatcaagtttttag 23375507  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||| | ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  23375506 atcaaaaagaggattagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggggaacgactt 23375407  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaa 310  Q
    |||| | || ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||     
T  23375406 actctccatggcgagtagcccattttcttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaagccgtatttgtgttttac 23375307  T
Q  311 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct 410  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||| ||    
T  23375306 gtactgttgggttggattctttggggggaacaaatagttatgatgaattatgttattttacctaagctgttgatttgaatat-attgattgttgatttct 23375208  T
Q  411 gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat 510  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||| ||    
T  23375207 gatttatgcatagttgcatttaaatagaatatacaagttgttggattccattgtcaaaagtcgttgtgtcatgagttgaccatgttaaggtgtaagacat 23375108  T
Q  511 atttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  23375107 atttaaatatgcactgttgagtagtagttgtcgttgtccat 23375067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 29 - 537
Target Start/End: Complemental strand, 24160937 - 24160429
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| ||||||||||| |||| |||  ||||||| |||||||||| |||||  | | ||| |||| |||| |||||| ||||||||||||||| ||| ||    
T  24160937 ttttcaaaatgttgttataggacgtgagttggatggttttgagtgtctgaatgtttttagagagggctggacaagtttttagatcaaaaaggggattagg 24160838  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||| |||| | |||||||| |||||||||||    
T  24160837 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagcaccatttttctgctcgccacggcgaacaacttactcgccatagcgagtag 24160738  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggttggat 327  Q
    ||| ||| ||  |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||  ||||  ||||||||||| ||||     
T  24160737 ccctttttctgaagctcgccatagcgagcagtgcactcgcctggcgagttgcatagtggctgagagccgcatttgcattttgtgtactgttgggctggaa 24160638  T
Q  328 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 427  Q
    || ||||||| | ||||||||  ||||||||||| |||||||| | ||| || |||||||||||||| |||||||||||||  |||||||| ||||||||    
T  24160637 tc-ttgggtatattaaataatcctgattaattatattattttatcagagttgctgatttgaatatgaatgattgttgattgtggatttatgtataattgc 24160539  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    || |||||| | |||||||||||||| ||||||||||| || |||||| ||||   ||||||||||||||| |||||||  ||||||| ||||||| ||     
T  24160538 atgtaaataaattatacaagttgttgaattccattgtcgaaggttgttatgtcattagttgaccatgttgatgtgtaagtcatatttatatatgcactgc 24160439  T
Q  528 tgagtagtag 537  Q
    || |||||||    
T  24160438 tgtgtagtag 24160429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 17 - 498
Target Start/End: Complemental strand, 25651906 - 25651426
Alignment:
Q  17 gagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaa 116  Q
    |||||| | ||||||||||| ||||||| |  | |||| ||||||| |||||||||||||| |  | | ||| ||||||||| | | || |||||| |||    
T  25651906 gagaaatcatgatttttaaattgttgttattagacgtaagttggatggttttgagtgcctggatgtttttagagaggactggactaatttttagattaaa 25651807  T
Q  117 aagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgc 216  Q
    |||   ||| |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||| ||||||||||||| |||| |   ||||||    
T  25651806 aagatgattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgatagcaccattttcctgctcgccacggcgaacaacgaactcgc 25651707  T
Q  217 tatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtac 314  Q
     |||||||||||||| ||| ||||||||||||||||||||| | ||||||||| | ||||||||| |||||||||| |||||| ||||  ||| | ||||    
T  25651706 catagcgagtagccc-ttttcttgagctcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtggctgagagccgcttctgcttttgatgtac 25651608  T
Q  315 tgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatt 414  Q
    |||||||||||| |  |||||||   | |||||||||||||||||||  ||||||| | ||| |||||| ||| |||||| ||||||||||||| |||||    
T  25651607 tgttgggttggaat-gttgggtatttttaataattatgattaattataatattttatcagagttgttga-ttgtatatgaatgattgttgattgttgatt 25651510  T
Q  415 tatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttga 498  Q
    |  | || |||| || |||| | | |||| ||||||||| |||||| |||  || ||||| |||| || |||||||||||||||    
T  25651509 tgagtatgattgtatgtaaacaaattatataagttgttgaattccaatgttgaatgttgtggtgttgctagttgaccatgttga 25651426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 334 - 543
Target Start/End: Complemental strand, 40261649 - 40261438
Alignment:
Q  334 ggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcattta 432  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  40261649 ggtagagtaaataattatgattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgattgttgatttatgtgtaattgcattta 40261550  T
Q  433 aatagaatatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgag 531  Q
    | || ||||||| ||||||||| || |||||| |||||||||||||||| | |||||||||||||||| |||| |  ||||||||||||||| ||||| |    
T  40261549 attaaaatatacaaagttgttgaatgccattgccaaaagttgttgtgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgttgtg 40261450  T
Q  532 tagtagttgttg 543  Q
    ||||||||||||    
T  40261449 tagtagttgttg 40261438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 56 - 291
Target Start/End: Complemental strand, 40261942 - 40261707
Alignment:
Q  56 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 155  Q
    |||||||  ||||| ||||||| | || ||||| |||||||||||||||| || ||||||||| |  ||| |||||||||||||||||||||||| | ||    
T  40261942 gttggatgattttgggtgcctggatatatatagagaggactgggcaagtttttggatcaaaaaagagattagggagcttaaaaatgaggatttagtgtga 40261843  T
Q  156 aaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcga 255  Q
    |||||||||||||||||||||| | | |||||||||||||||||| ||| || |||||||  ||||||||||| ||||||||||||||| ||||||||||    
T  40261842 aaaatgtcaaaactcccgagagaaactattttctgctcgccacggcgaatgacttactcgtcatagcgagtag-ccatttccttgagcttgccatagcga 40261744  T
Q  256 gcagtgcactcgcgtggcgag-ttgcacagtggctga 291  Q
    ||||||||||||| |||| || ||||||||| |||||    
T  40261743 gcagtgcactcgcctggcaagattgcacagtagctga 40261707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 330 - 551
Target Start/End: Complemental strand, 23085772 - 23085549
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc 427  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||||| ||||||| |  || ||||  ||||||     
T  23085772 tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtgtaattgt 23085673  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| |  ||||||||||||||| |||    
T  23085672 atttaaataaattatacaagttgttgaatgccattgccaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgt 23085573  T
Q  528 tgagtagtagttgttgatgtccat 551  Q
    || ||||||||||||| |||||||    
T  23085572 tgtgtagtagttgttgttgtccat 23085549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 127 - 499
Target Start/End: Complemental strand, 22841525 - 22841166
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||          ||||||| ||||||||    
T  22841525 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 22841436  T
Q  226 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttgggtt 323  Q
    |||| |||||| ||||| ||||||||||||| || |||||||||| |||||||||| |  |  |||||||||  | | ||| ||| | ||||||||| ||    
T  22841435 tagctcatttc-ttgagttcgccatagcgagtagatgcactcgcgaggcgagttgctcgatacctgaagccgtttttatgtatttgaatactgttgg-tt 22841338  T
Q  324 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 423  Q
    |||||  ||| |||| | ||||| |||||||||||| |||||||||||| |||||||||| || | ||||||  |||| |||||||||  ||||| |||     
T  22841337 ggatt--ttgtgtaggacaaatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgctgattgctg--ttatgtatat 22841242  T
Q  424 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgag 499  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||||||| ||   ||||||| ||||||||    
T  22841241 ttatatttaaataaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagttgactatgttgag 22841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 543
Target Start/End: Complemental strand, 21903515 - 21903322
Alignment:
Q  351 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 449  Q
    |||||||||||||| ||| |||  ||||||||||||||||||||||||||| ||||||| ||   |||| ||||||  ||||||||| | ||||||||||    
T  21903515 tgattaattatgttgtttctactagagctgttgatttgaatatgattgattattgattgttgtcctatgtataattatatttaaataaattatacaagtt 21903416  T
Q  450 gttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttg 543  Q
    |||| || |||||| ||||||||||| |||| | |||||||||||||||| |||| |  ||||||||||||||| ||||| |||||||| ||||    
T  21903415 gttgaatgccattgacaaaagttgttatgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgttgtgtagtagtagttg 21903322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 330 - 551
Target Start/End: Original strand, 20353137 - 20353337
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 428  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||| |    
T  20353137 tttgggtagaataaataattatgatta-ttatgttatttttaccagagctgttgatttgaatatgattgattgttgattgttgttttatgtataattgaa 20353235  T
Q  429 tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgtt 528  Q
    |||||||| ||||||                     |||||||||||||||| | |||||||||||||||||||||||  |||||||| |||||| ||||    
T  20353236 tttaaataaaatata---------------------caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaagtatgcactgtt 20353314  T
Q  529 gagtagtagttgttgatgtccat 551  Q
    | ||||||| ||||| |||||||    
T  20353315 gtgtagtagatgttgttgtccat 20353337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 24669335 - 24669493
Alignment:
Q  21 aaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg 120  Q
    |||||||||||||||| ||||||| || |  ||| ||||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||     
T  24669335 aaccttgatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaaga 24669434  T
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
      | | |||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  24669435 tgaatagggagcttaaaaatgacgagttagtgagaaaaatgtcaaaactcccgagagca 24669493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 23086083 - 23085902
Alignment:
Q  17 gagaaaccttgattttt-aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaa 115  Q
    |||||| | |||||||| ||||||||| | |||| |||  |||||||  ||||||||||||| |  | ||||| ||||| |||||||||| || ||||||    
T  23086083 gagaaatcatgatttttcaaaatgttgctataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggattgggcaagtttttggatcaa 23085984  T
Q  116 aaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 197  Q
     ||    ||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||||||||    
T  23085983 gaaaaagattagggagcttaaaaatgagaatttagtgtgaaaaatgtcaaaactcccgagagcaattattttctgctcgcca 23085902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 386 - 537
Target Start/End: Complemental strand, 22109740 - 22109588
Alignment:
Q  386 tgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcga 484  Q
    ||||||||||||||||||| ||| || || ||| ||| ||  ||||||||| | |||||||| | ||| || ||||||| |||| ||||||||||| |||    
T  22109740 tgaatatgattgattgttgtttgttgtttgatgtatatttatatttaaataaattatacaagattttgaataccattgtgcaaaggttgttgtgtcacga 22109641  T
Q  485 gttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtag 537  Q
     ||||| |||||||||||||||  ||   |||||||||||||||| |||||||    
T  22109640 attgacaatgttgaggtgtaagtcatgaataaatatgcattgttgtgtagtag 22109588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 23085899 - 23085824
Alignment:
Q  221 gcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgag-ttgcacagtggctgaagcc 295  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||  ||| ||||||||||||||    
T  23085899 gcgagtagcccttttccttgagctcgccatagcgagcagtgcactcgcctggagagaatgcccagtggctgaagcc 23085824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 21121132 - 21121290
Alignment:
Q  21 aaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg 120  Q
    |||||||||||||| | ||||||| || ||  || || || | ||||||||||||||||  | | ||| ||||||||||  | || | |||| ||||||     
T  21121132 aaccttgatttttagattgttgttataagttataagtaggttagttttgagtgcctgaatgtttttagagaggactgggacaattttcagattaaaaaga 21121231  T
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
      | | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21121232 tgaatagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21121290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19036043 - 19035991
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19036043 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19035991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23149170 - 23149118
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23149170 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23149118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23560960 - 23560908
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23560960 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23560908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 25267764 - 25267712
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25267764 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 25267712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23291486 - 23291437
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23291486 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 23291437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 17634454 - 17634402
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  17634454 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 17634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23753351 - 23753299
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23753351 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23753299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 25174431 - 25174379
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  25174431 gggagcttaaaaatgaagatttggtgagaaaaatgtcaaaactcccgagagca 25174379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 25365537 - 25365589
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25365537 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 25365589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 548
Target Start/End: Original strand, 10039933 - 10040075
Alignment:
Q  405 attgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgta 504  Q
    |||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||| | || |||||||||||   ||||||||||||||| | |||    
T  10039933 attgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgccgaaggttgttgtgtc-atagttgaccatgttgatgagta 10040031  T
Q  505 agatatatttaaatatgcattgttgagtagtagttgttgatgtc 548  Q
    ||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  10040032 agtcatattcatatatgcattattgtgtagcagttgttgttgtc 10040075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 32911100 - 32911147
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32911100 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 32911147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 22790631 - 22790701
Alignment:
Q  17 gagaaaccttgattttt-aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtat 86  Q
    |||||| | |||||||| |||||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  22790631 gagaaatcatgatttttcaaaatgttgttttaggacgtgtgttggatggttttgagtgcctggacatgtat 22790701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 24943938 - 24943888
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  24943938 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 24943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 20913949 - 20913998
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  20913949 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgaga 20913998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 24652877 - 24652828
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  24652877 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 24652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 2106134 - 2106082
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  2106134 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 2106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 8889583 - 8889635
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||| ||||| ||||||| |||||||||||||||| |||||||||||    
T  8889583 gggagcttaagaatgaagatttagtgagaaaaatgtcaaaattcccgagagca 8889635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20648636 - 20648584
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  20648636 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 20648584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20724573 - 20724521
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  20724573 gggaacttaaaaatgaggttttactgagaaaaatgtcaaaactcccgagagca 20724521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 24659321 - 24659269
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  24659321 gggaacttaaaaattaagatttagtgagaaaaatgtcaaaactcccgagagca 24659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 25107083 - 25107135
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  25107083 gggaacttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 25107135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19703097 - 19703149
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| | | | ||||| ||||||||||||||||||||||||||||    
T  19703097 gggagcttaaaattaaagttttagtgagaaaaatgtcaaaactcccgagagca 19703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 22810437 - 22810385
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| |||||||| || ||||||| ||||||||| ||||||||||||||||||    
T  22810437 gggaacttaaaaaagaagatttagtgagaaaaatatcaaaactcccgagagca 22810385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 14564353 - 14564302
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  14564353 ggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 14564302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19649159 - 19649211
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||| ||||    
T  19649159 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgaaagca 19649211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 27272677 - 27272625
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| |||||  | || |||||||||||||||| |||||||||||    
T  27272677 gggagcttaaaattgaggtctgagtgagaaaaatgtcaaaattcccgagagca 27272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 28970910 - 28970950
Alignment:
Q  156 aaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  28970910 aaaatgtcaaaactcccgagagcagcctttttctgttcgcc 28970950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 335; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 11 - 541
Target Start/End: Original strand, 28204091 - 28204620
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||| |||||| ||||||||||||||||| |||||||| ||||||| ||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||    
T  28204091 cagagaaagaaactttgatttttaaaatgttattttaggtagtatgttcgatagttttgagtgcctggatgtttatggagaggactgatcaagtttttag 28204190  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||| | ||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||    
T  28204191 atcaaaaagaggattagggcgcttaaaaatgaggatttagtcagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccatggcgaacgactt 28204290  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaa 310  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| |    
T  28204291 actcgccatcgcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcctgacgagttgcacagtggctgaagccgcatttgtgttttga 28204390  T
Q  311 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct 410  Q
    |||||| | |||||||||||| ||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||    
T  28204391 gtactgataggttggattcttcgggtagaataaataattgtgataaattatgttattttatcagagctgttgatttgaatat-attgattgttgattgct 28204489  T
Q  411 gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat 510  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||| ||    
T  28204490 gatttatgcatagttgcgtttaattagaatatacaagttgttggattccattgtcaaaagtcgtcgtgtcacgagttaaccatgttgaggtgtaagacat 28204589  T
Q  511 atttaaatatgcattgttgagtagtagttgt 541  Q
    ||||||||||||| |||| ||||||||||||    
T  28204590 atttaaatatgcactgtttagtagtagttgt 28204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 11 - 551
Target Start/End: Complemental strand, 20901821 - 20901280
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |  |  || | ||||||||||| | || |||     
T  20901821 cagagaaagaaactttgatttttaaaatgttgttttaggtcgtatgtcggatggttttgagtgcctggatgttaatggagaggactgggccaatttttat 20901722  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    || ||||||    || | |||||||||||||| ||||||| ||||||||||||||||||  |||||||| || ||||||||||||||||| |||| | ||    
T  20901721 attaaaaagatgtttagagagcttaaaaatgaagatttagtgagaaaaatgtcaaaactttcgagagcaccatttttctgctcgccacggcgaacaactt 20901622  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-tttt 308  Q
    |||||| ||||||||||||| |||| |||||| ||||| |||||||| | ||||||||| |  |||||||| |||| |||||||||||||||||| ||||    
T  20901621 actcgccatagcgagtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcacgagttgctcagtagctgaagccgcatctgtgttttt 20901523  T
Q  309 aagtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg 408  Q
     | ||||||| |||||||||| | | |||| | |||||||||| |||||||||| ||||||||| |||||| ||| |  ||||||| |||||||||||||    
T  20901522 gaatactgtttggttggattc-tcgtgtaggacaaataattataattaattatgctattttaccagagctgctgagtcaaatatgactgattgttgattg 20901424  T
Q  409 ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaaga 507  Q
     || || ||| ||| ||  ||||||||| | |||||||||| ||| || ||||| | |||| ||||||||||| | | ||||  |||||||||||||||     
T  20901423 ttgtttgatgtatatttatatttaaataaattatacaagtttttgaataccattatacaaaggttgttgtgtcacaaattgataatgttgaggtgtaagt 20901324  T
Q  508 tatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
     ||   |||||||||| ||||| | ||||| |||||||||||||    
T  20901323 catgaataaatatgcactgttgtgaagtagatgttgatgtccat 20901280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 14801058 - 14800939
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| |||||| |||||||||||||  ||||||| ||| |||||||||  |||| ||||| ||||||| |||||||| || |||||||||||||||| ||    
T  14801058 ttttgaaaatgctgttttaggtcgtgggttggatggttatgagtgccttgacatatatagagaggactaggcaagtttttggatcaaaaagggaattagg 14800959  T
Q  129 gagcttaaaaatgaggattt 148  Q
    ||||||||||||| ||||||    
T  14800958 gagcttaaaaatggggattt 14800939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 14809932 - 14809813
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| |||||| |||||||||||||  ||||||| ||| |||||||||  |||| ||||| ||||||| |||||||| || |||||||||||||||| ||    
T  14809932 ttttgaaaatgctgttttaggtcgtgggttggatggttatgagtgccttgacatatatagagaggactaggcaagtttttggatcaaaaagggaattagg 14809833  T
Q  129 gagcttaaaaatgaggattt 148  Q
    ||||||||||||| ||||||    
T  14809832 gagcttaaaaatggggattt 14809813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 291
Target Start/End: Original strand, 21527161 - 21527416
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||||||||||| || | |||| ||||||  |||||||||||||| |  | | |||  ||||||| || | || |||||| ||||||  ||||    
T  21527161 tgatttttaaaatgttgttataagacgtaagttggacggttttgagtgcctggatgtttttagataggactgtgccaatttttagattaaaaagataatt 21527260  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 225  Q
     | |||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||  ||||||||| |           |||||| ||||||||    
T  21527261 agcgagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccattttcttgctcgccatgc----------actcgccatagcgag 21527350  T
Q  226 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 291  Q
    | |||  |||| |||||||||||||||||||| | ||||||||| | ||||||||| |||| |||||    
T  21527351 tggcctttttc-ttgagctcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctga 21527416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 403 - 551
Target Start/End: Original strand, 21117996 - 21118143
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg 502  Q
    |||||| ||||||||| ||||||||||||||| | | |||||||||||||| ||| ||||||| || |||||||||||   ||||||||||||||| | |    
T  21117996 tgattgttgatttatgtataattgcatttaaacaaattatacaagttgttgaatttcattgtccaaggttgttgtgtc-atagttgaccatgttgatgag 21118094  T
Q  503 taagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||   ||||| | ||||||||||||| |||| |||||||| |||||||    
T  21118095 taactcatattcatatatgcattgttgtgtagcagttgttgttgtccat 21118143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 8683627 - 8683472
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  8683627 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 8683538  T
Q  226 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 291  Q
    |||| ||||| |||||| ||||||||| |||| | ||||||||| | ||||||||| |||| |||||    
T  8683537 tagctcattt-cttgagttcgccatagtgagcaaatgcactcgcctcgcgagttgctcagtagctga 8683472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 8685914 - 8685740
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||||||||||| || |  ||| |||| || ||||||||||||||    | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  8685914 tgatttttaaaatgttgttataagatgtaagttgaatggttttgagtgcctgggtgtttttagagaggacttggacaatttttagattaaaaagatgatt 8685815  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 199  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  8685814 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 8685740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 21733929 - 21734087
Alignment:
Q  21 aaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg 120  Q
    |||||||||||||||| ||||||| || |   || ||||| | |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||     
T  21733929 aaccttgatttttaaattgttgttataaggtataagttggttagttttgagtgcctggatttttttagagaggactgggacaattttcagattaaaaaga 21734028  T
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
      | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21734029 tgaatagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 280
Target Start/End: Original strand, 25091798 - 25092042
Alignment:
Q  27 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 126  Q
    |||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| |||||||||   | || |||||| ||||||   |||     
T  25091798 gattttcaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttagagaggactggaacaatttttagattaaaaagatgatta 25091897  T
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 225  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |  |||||| | ||||| ||          ||||||| ||||||||    
T  25091898 gggagctcaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccctttttctcgttcgcctcg----------tactcgccatagcgag 25091987  T
Q  226 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    ||||||| ||||||||| |||||||||||||||| ||  |||||| ||||||||||    
T  25091988 tagccca-ttccttgagttcgccatagcgagcagatgtgctcgcgaggcgagttgc 25092042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 24476005 - 24475850
Alignment:
Q  24 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 123  Q
    ||||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||  |  | | ||| ||||||||||  | || |||||| ||||||   |    
T  24476005 cttgattttcaaattgttgttataaggtgtaagttggatagttttgagtgccttgatgtttttagagaggactgggacaatttttagattaaaaagatga 24475906  T
Q  124 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    || |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  24475905 ttagggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 24475850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15316120 - 15316172
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15316120 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15316172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21410292 - 21410344
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21410292 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21410344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 3706393 - 3706452
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  3706393 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 3706452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 21745110 - 21745268
Alignment:
Q  21 aaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg 120  Q
    |||||||||||||||| ||||||| || |  |||  |||||| |||||||||||||| |  | | ||| ||||||| ||  | || |||||| ||||||     
T  21745110 aaccttgatttttaaattgttgttataaggtgtaatttggatagttttgagtgcctggatgtttttagagaggacttggacaatttttagattaaaaaga 21745209  T
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
      | |  ||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  21745210 tgaatatggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 21745268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 23631518 - 23631456
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||| | |||||||    
T  23631518 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacccattttct 23631456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 41312708 - 41312659
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  41312708 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 41312659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 5381191 - 5381139
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  5381191 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 5381139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19853582 - 19853530
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19853582 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19859717 - 19859665
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19859717 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19859665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21733036 - 21732984
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21733036 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21732984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21986517 - 21986569
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  21986517 gggagcttaaaagtgaagatttagtgagaaaaatgtcaaaactcccgagagca 21986569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 22434570 - 22434622
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  22434570 gggagcttaaaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23712756 - 23712704
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  23712756 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23712704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 24238023 - 24238075
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  24238023 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 24238075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 20837818 - 20837881
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 190  Q
    |||| |||||||| || ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  20837818 gggaacttaaaaaggaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctg 20837881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 31926933 - 31926982
Alignment:
Q  130 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  31926933 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 31926982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 954705 - 954757
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  954705 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 954757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19666345 - 19666397
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  19666345 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 19666397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 20595728 - 20595780
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||    
T  20595728 gggagctaaaaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 20595780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20849587 - 20849535
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  20849587 gggagcttaaaagtgaagatttagtgagaaaaatgtcaaaactccggagagca 20849535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 21698657 - 21698609
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 175  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  21698657 gggagcttaaaaatgaagatttagtgagaaaaatgtgaaaactcccgag 21698609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 16883173 - 16883220
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  16883173 cttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 16883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 20941474 - 20941543
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| ||||||||||| ||||||| |||||||||| |||||||| |||||||| |  ||||||| |||||    
T  20941474 gggaacttaaaaatgaagatttagtgagaaaaatgacaaaactctcgagagcatcctttttctgttcgcc 20941543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 21986591 - 21986675
Alignment:
Q  210 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagc 294  Q
    ||||||| || || |||| |||||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||||  |||||||    
T  21986591 tactcgccatggcaagtaacccatttcct-gagctcgctatagcgagcagatgcactcgcgaggcgagttgcccagtatctgaagc 21986675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 548
Target Start/End: Complemental strand, 24960313 - 24960158
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgac 490  Q
    |||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||| | | ||||| | || ||||||| |||   || ||||    
T  24960313 atgaatgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttgaaattcattg-cgaaggttgttgcgtc-atagctgac 24960216  T
Q  491 catgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtc 548  Q
    |||||||| | |||||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  24960215 catgttgatgagtaagtcatattcatatatgcattattgtgtagcagttgttgttgtc 24960158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20243103 - 20243051
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| | ||||||||||||||||||||||||||    
T  20243103 gggagcttagaattgatgatttagtgcgaaaaatgtcaaaactcccgagagca 20243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21664726 - 21664674
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  21664726 gggaacttaaaaatgaagatttactgagaaaaatgttaaaactcccgagagca 21664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 30491054 - 30491106
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||| |||||||| ||| |||||    
T  30491054 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaacttccgtgagca 30491106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 36917641 - 36917589
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  36917641 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 36917589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 20823989 - 20824048
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||| ||||||| ||||||||| |||||||||||| |||||||  ||||||| |||||    
T  20823989 aaatgaagatttagtgagaaaaatatcaaaactcccgtgagcagcctttttctgttcgcc 20824048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 29554069 - 29554116
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  29554069 cttaaaaatgaagatttagtgaaaaaaatgtcaaaactctcgagagca 29554116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 29601881 - 29601932
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 178  Q
    ||||||||| || ||||| || || |||||||||||||||||||||||||||    
T  29601881 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagc 29601932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 43088894 - 43088851
Alignment:
Q  136 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  43088894 aaaatgaagatttagtgagaaaaatgacaaaactcccgagagca 43088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 19336335 - 19336297
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaa 165  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  19336335 gggagcttaaaaatgaagatttagtgagaaaaatgtcaa 19336297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 36615445 - 36615395
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  36615445 gagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 36615395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 19853509 - 19853444
Alignment:
Q  221 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||| ||||| ||| |||| ||||||||||||||| || |||||||||| |||||||||| ||||    
T  19853509 gcgagcagcccgttttcttgtgctcgccatagcgagtagatgcactcgcgaggcgagttgcccagt 19853444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 19859644 - 19859579
Alignment:
Q  221 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||| ||||| ||| |||| ||||||||||||||| || |||||||||| |||||||||| ||||    
T  19859644 gcgagcagcccgttttcttgtgctcgccatagcgagtagatgcactcgcgaggcgagttgcccagt 19859579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 11140722 - 11140766
Alignment:
Q  242 gctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||    
T  11140722 gctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 11140766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 20086171 - 20086246
Alignment:
Q  210 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||| |||||||||| |||||| ||||||| ||||||||||||| || || ||| ||| |||||||||| ||||    
T  20086171 tactcgccatagcgagtaacccatt-ccttgagttcgccatagcgagtagatgtacttgcgaggcgagttgcccagt 20086246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21921322 - 21921270
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  21921322 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaattcccgagagca 21921270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 24108626 - 24108678
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  24108626 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 24108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 49328556 - 49328504
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  49328556 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 49328504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 334; Significance: 0; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 11 - 551
Target Start/End: Original strand, 33661935 - 33662475
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgt-atagggaggactgggcaagttgtta 109  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||| |  | | || | ||||||||  |||||| |||    
T  33661935 cagagaaagaaactttgatttttaaaatgttgttttaggtagtatgttggatgattttgagtgcctggatgttttatggagaggactgatcaagttttta 33662034  T
Q  110 gatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaat 209  Q
    |||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  |||||||| | |||||| |    
T  33662035 gatcaaaaagaggattagggagcttaaaaatgaggatttagtcagaaaaatgtcaaaactcccgagagcagcaattttcaactcgccacagcgaacgact 33662134  T
Q  210 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtttta 309  Q
    |||| || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||     
T  33662135 tacttgccatggcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaaaccgtatatgtgttttg 33662234  T
Q  310 agtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgc 409  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||| |||||| ||||||||||||||||    
T  33662235 agtactgatgggttggattctttgggtagaataaataattgtgataaattatgttattttatcagagctgttgattcgaatat-attgattgttgattgc 33662333  T
Q  410 tgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagata 509  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||| |    
T  33662334 tgatttatgcatagttgcatttaattagaatatacaagttgttggattccattgtcaaaagtcgtcgtgtcacgagttaaccatgttgaggtgtaagaca 33662433  T
Q  510 tatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||||| ||||||||||||||||| | |||||||    
T  33662434 tatttaaatatgcactgttgagtagtagttgtggttgtccat 33662475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 29 - 553
Target Start/End: Original strand, 16371104 - 16371628
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| |||||||| || |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||||||||||| ||||||||||||| | ||| ||    
T  16371104 ttttcaaaatgttcttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgggcaagtttttagatcaaaaagaggattagg 16371203  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| | || | |||||||| |||||||||||    
T  16371204 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcggacaacttactcgccatagcgagtag 16371303  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggttggat 327  Q
    ||| ||| ||  || ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||  ||||||||||| ||||     
T  16371304 ccctttttctgaagttcgccatagcgagcagtgcactcgcctgacgagttgcacagtggctgagagccgcatttgtgttttgtgtactgttgggctggaa 16371403  T
Q  328 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 427  Q
    || ||||||| | ||||| ||  ||||||||||| |||||||| | ||| || |||||||||||| | ||||| |||||||   ||||||| ||||| ||    
T  16371404 tc-ttgggtatattaaatgatcttgattaattatattattttatcagagttgctgatttgaatataaatgattattgattgtgaatttatgtataatcgc 16371502  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    || |||||| | |||||||||||||| ||||||||||| || ||||||||||  | ||||||||||||||| |||||||  ||||||| ||||||| ||     
T  16371503 atgtaaataaattatacaagttgttgaattccattgtcgaaggttgttgtgttactagttgaccatgttgatgtgtaagtcatatttatatatgcactgc 16371602  T
Q  528 tgagtagtagttgttgatgtccatct 553  Q
    || ||||||| ||| | |||||||||    
T  16371603 tgtgtagtagatgtcgttgtccatct 16371628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 8711236 - 8710945
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |  |||||||||||||||| || |    
T  8711236 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtttgttggatggttttgagtgcctggacatgtacaaagaggactgggcaagtttttgg 8711137  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||| ||  || ||    
T  8711136 atcaaaaagggaattagggagcttaaaaatggggatttagtgtgaaaaatgtcaaaactcccgagagtagctattttctgctcgccacggcgagtgactt 8711037  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctg 302  Q
    |||||| || |||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  8711036 actcgccatcgcgagttgcccattttattgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaagccacatctg 8710945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 18 - 551
Target Start/End: Complemental strand, 13878461 - 13877927
Alignment:
Q  18 agaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaa 117  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | || ||||   |||||| |||||||||||    
T  13878461 agaaactttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaagactaatcaagtttttagatcaaaa 13878362  T
Q  118 agggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgct 217  Q
    || | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| || || | | ||||||||     
T  13878361 agaggattagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccatggcgagcaacttactcgcc 13878262  T
Q  218 atagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttaagtact 315  Q
     |||||||||||| |||| |||||| ||||| || ||||| | ||||||||| | ||||||||| |||| |||||||||||||||||| |||| | ||||    
T  13878261 ctagcgagtagcctattttcttgagttcgcc-taccgagcaaatgcactcgcctcgcgagttgctcagtagctgaagccgcatctgtgttttttaatact 13878163  T
Q  316 gttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgattt 415  Q
    ||| ||||||| || | | |||| | |||||| ||||| |||||||| |||||||||  |||||  || |||||||||||| |||| |||||| || ||     
T  13878162 gtttggttgga-tcctcgtgtaggacaaataactatgaataattatgctattttaccatagctgcagagttgaatatgattaattgctgattgttgtttg 13878064  T
Q  416 atgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatattt 514  Q
    ||| ||| ||  ||||||||| | |||||||||| ||| |  ||||||| |||| ||||||||||| | |  |||| |||||||||||||||  ||   |    
T  13878063 atgtatatttatatttaaataaattatacaagtttttgaaaaccattgtacaaaggttgttgtgtcacaaactgacaatgttgaggtgtaagtcatgaat 13877964  T
Q  515 aaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||| ||||| ||||||| ||||| |||||||    
T  13877963 aaatatgcactgttgtgtagtagctgttgttgtccat 13877927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 29 - 523
Target Start/End: Original strand, 15416262 - 15416754
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| |||| |||||| |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||||||||||| ||||||||||| |   ||| ||    
T  15416262 ttttcaaaacgttgttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgggcaagtttttagatcaaaaggatgattagg 15416361  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
     ||||||||||||| ||||||| |||||||||||||||||||||||||||| |  ||| ||||||||||||  |||| |  ||||||| |||||||||||    
T  15416362 aagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacctttttgctgctcgccacgtcgaacaacctactcgccatagcgagtag 15416461  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggttggat 327  Q
    ||| ||| ||  || |||||||||||| ||| |||||||| | ||||||||| |||||||||| |||||||| ||   ||| |||| ||||||| ||||     
T  15416462 ccccttttctgaagttcgccatagcgaacagagcactcgcctcgcgagttgctcagtggctgagagccgcatttg-catttgagtattgttgggctggaa 15416560  T
Q  328 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 427  Q
    || || ||||   | ||||||  ||||||||||| ||||||||   ||| || |||||||||||||| |||||||||||||  ||||  || ||||||||    
T  15416561 tc-ttaggta-ttttaataatcctgattaattatattattttattagagttgctgatttgaatatgaatgattgttgattgtggattattgtataattgc 15416658  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 523  Q
    || |||||| | |||||||||||||  |||||| |||| || |||||||||||   ||||||||||||||| |||||||  ||||||| |||||||    
T  15416659 atgtaaataaattatacaagttgttaaattccaatgtcgaaggttgttgtgtcattagttgaccatgttgatgtgtaagtcatatttatatatgca 15416754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 11 - 551
Target Start/End: Complemental strand, 13882073 - 13881555
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||    
T  13882073 cagagaaagaaactttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctagatgtttatggagaggactgatcaagtttttag 13881974  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||| | | ||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||                  
T  13881973 atcaaaaggaggattagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactctcgagagcaccatttttctgctcgcc-------------- 13881888  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-tttt 308  Q
            |||| ||||||| |||| |||||| ||||| |||||||| | ||||||||| | ||||||||| || | |||||| ||||||||||| ||||    
T  13881887 -------ctagcaagtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcaatagctgaatccgcatctgtgttttt 13881796  T
Q  309 aagtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg 408  Q
     | ||||||| ||||||| || | | |||| | |||||| ||||| |||||||| ||||||||| ||||||  || ||||||||||||||||| ||||||    
T  13881795 gaatactgtttggttgga-tcctcgtgtaggacaaataactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgctgattg 13881697  T
Q  409 ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaaga 507  Q
     || || ||| |||  |  ||||||||| | |||||||||| ||| || ||||||| |||| ||||||||||| | | ||||| |||||||||||||||     
T  13881696 ttgtttgatgtata--tatatttaaataaattatacaagtttttgaataccattgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaagt 13881599  T
Q  508 tatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
     ||   |||||||||| |||||  | |||||||||| |||||||    
T  13881598 catgaataaatatgcactgttgtattgtagttgttgttgtccat 13881555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 21189334 - 21189513
Alignment:
Q  18 agaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaa 117  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||||     
T  21189334 agaaactttgatttttaaaatgttattttaggtcgtatattggatggttttgagtgcctggacatgtatagagaggactgggcaagtttttagatcaaag 21189433  T
Q  118 agggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 197  Q
    || | ||  ||||||||||| |||||||||||  |||||||||||||||||||||||||||| | |||||||| ||||||    
T  21189434 agaggatcagggagcttaaatatgaggatttaatgagaaaaatgtcaaaactcccgagagcacctattttctgttcgcca 21189513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 15076031 - 15075857
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| ||||||| || |  ||| |||||||||||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  15076031 tgattttcaaattgttgttataagatgtaagttggatcgttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 15075932  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 199  Q
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||    
T  15075931 acggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcataatttttcttgctcgccacg 15075857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 127 - 547
Target Start/End: Complemental strand, 32490335 - 32489926
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||          ||||||| |||| |||    
T  32490335 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcacgagagcaccatttttcttgctcgccacg----------tactcgccatagggag 32490246  T
Q  226 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctg-aagccgcatctg-tgttttaagtactgttgggt 322  Q
    |||| ||||| |||||| |||||||||| ||| | ||||||||| | ||||||||| |||| |||| |||| || | ||   ||||   ||| ||| |||    
T  32490245 tagctcattt-cttgagttcgccatagcaagcaaatgcactcgcctcgcgagttgctcagtagctgaaagctgcttttgcaattttgtatacggtttggt 32490147  T
Q  323 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 422  Q
    |||| || || ||||  || | ||||  |||||||||||  | ||||| | ||| || ||||||| ||||||  ||||||||||||   ||||| | |||    
T  32490146 tggaatc-ttaggta-tattattaatcctgattaattataatgttttatctgagttgctgatttgtatatgaaggattgttgattgtgtatttaagtata 32490049  T
Q  423 attgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 522  Q
    |||| ||  ||||| | |||||||||||||| ||| || |||  |  ||||| |||| || |||||| ||||||||  ||||||  ||||||| ||||||    
T  32490048 attgtatgaaaataaattatacaagttgttgaatttcaatgttgagtgttgtagtgttgctagttgatcatgttga--tgtaagtcatatttatatatgc 32489951  T
Q  523 attgttgagtagtagttgttgatgt 547  Q
    ||||||| ||||||| |||||||||    
T  32489950 attgttgtgtagtagatgttgatgt 32489926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 476 - 551
Target Start/End: Original strand, 21189933 - 21190008
Alignment:
Q  476 gtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||| ||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||    
T  21189933 gtgtcgcaagttgactatgtggaggtgtaagacatatttaaatatgcattgtagagtagtagttgtcgttgtccat 21190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 18165901 - 18165953
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18165901 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18165953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 30239633 - 30239581
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30239633 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 30239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 14555698 - 14555751
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 180  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14555698 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcag 14555751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15004728 - 15004780
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  15004728 gggagcttaaaaaagaagatttagtgagaaaaatgtcaaaactcccgagagca 15004780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15360438 - 15360490
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15360438 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15360490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16228735 - 16228787
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  16228735 gggagcttaaaaatgaagattcagtgagaaaaatgtcaaaactcccgagagca 16228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 16485205 - 16485153
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  16485205 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 16485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 17176927 - 17176875
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  17176927 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagca 17176875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18261862 - 18261810
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18261862 gggagcttaaaaatgaagatttagtgacaaaaatgtcaaaactcccgagagca 18261810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18271827 - 18271775
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18271827 gggagcttaaaaatgaagatttagtgacaaaaatgtcaaaactcccgagagca 18271775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 41528700 - 41528752
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  41528700 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 41528752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 53904961 - 53905013
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  53904961 gggagcttaaaaatgaagatttagtgagaaatatgtcaaaactcccgagagca 53905013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 10972550 - 10972604
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  10972550 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 10972604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 15318556 - 15318458
Alignment:
Q  90 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 188  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||||||| ||||||| |||||||||||||||||||  ||||||| || |||||    
T  15318556 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcttgagagcaccatttttc 15318458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 23122162 - 23122104
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 190  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||  |||||||    
T  23122162 cttagaaatgaggatttagtgagaaaaatgtcaaaactcctgagagcagcctttttctg 23122104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 20940828 - 20940759
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| |||||||||||||||||| ||||||||| || ||||||| |||||    
T  20940828 gggagcttagaattgatgatttagtgagaaaaatgtcaaaacttccgagagcaccacttttctgttcgcc 20940759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11170856 - 11170908
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  11170856 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 11170908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 14821918 - 14821866
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  14821918 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccaagagca 14821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 15069431 - 15069295
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| |||||||||| |  ||| ||||||| |||||||||||||| |  | | ||| ||| ||||||  | || |||||| ||||||  || |    
T  15069431 tgattttcaaattgttgttttaagatgtaagttggatggttttgagtgcctggatgtttttagagagtactgggacaatttttagattaaaaagataaat 15069332  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgt 162  Q
     |||||||||||||||| ||||||| |||||||||||    
T  15069331 agggagcttaaaaatgaagatttagtgagaaaaatgt 15069295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 15547120 - 15547068
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  15547120 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 15547068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19127951 - 19128003
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||||| || || ||||||||||||||||||||||||||||    
T  19127951 gggagcttaaaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 19128003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 10783899 - 10783953
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||| |||||||||    
T  10783899 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcctgagagcagc 10783953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 539
Target Start/End: Complemental strand, 15318356 - 15318162
Alignment:
Q  342 aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata 441  Q
    |||||| ||||||||||  || ||||||||| |||||||| | || | ||||||  ||||||||||||||  || || ||| ||  ||||||||| | ||    
T  15318356 aaataactatgattaatcgtgctattttaccagagctgttaaattaagtatgatgaattgttgattgctg--ttgtgtatatttatatttaaataaacta 15318259  T
Q  442 tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagtt 539  Q
    |||||||||||| ||| |||| ||||| |||| ||| ||    |||||| |||||| || |||||  ||||  | |||||||||||||||||| ||||    
T  15318258 tacaagttgttgaatttcatt-tcaaaggttgatgtatccttggttgactatgttgtggagtaagtcatatacatatatgcattgttgagtagcagtt 15318162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 453
Target Start/End: Original strand, 27849267 - 27849333
Alignment:
Q  387 gaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg 453  Q
    |||||||| |||| |||||||| ||||||||| |||||| |||||||| | | ||||||||||||||    
T  27849267 gaatatgaatgatggttgattgttgatttatgtataatttcatttaaacaaattatacaagttgttg 27849333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 1650673 - 1650742
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| ||||||||||| | ||| | |||||||||||||||||||||||||||| |  ||||||| |||||    
T  1650673 gggaacttaaaaatgaagttttcgtgagaaaaatgtcaaaactcccgagagcaccccttttctgttcgcc 1650742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 14158225 - 14158177
Alignment:
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag 259  Q
    |||||| || |||||||| || |||||||||||||||||||||||||||    
T  14158225 actcgccatggcgagtaggccttttccttgagctcgccatagcgagcag 14158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 49051521 - 49051469
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  49051521 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 49051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 14164909 - 14164862
Alignment:
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagca 258  Q
    |||||| || |||||||| || ||||||||||||||||||||||||||    
T  14164909 actcgccatggcgagtaggccttttccttgagctcgccatagcgagca 14164862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 43284530 - 43284565
Alignment:
Q  144 gatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| ||||||||||||||||||||||||||||    
T  43284530 gatttagtgagaaaaatgtcaaaactcccgagagca 43284565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2972341 - 2972393
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| |  ||||| || || ||||||||||||||||||||||||||||    
T  2972341 gggagcttagatttgaggtttgagtgagaaaaatgtcaaaactcccgagagca 2972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 13454291 - 13454239
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| |||||||||||||||||||| |||||||    
T  13454291 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactccagagagca 13454239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 14484889 - 14484837
Alignment:
Q  234 ttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||| ||||||||||||||||||||  ||||||||| |||||||||| ||||    
T  14484889 ttcctggagctcgccatagcgagcagaggcactcgcgaggcgagttgcccagt 14484837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 14487155 - 14487104
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||| ||||||||    
T  14487155 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactctcgagagca 14487104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 15325434 - 15325383
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||| ||| ||||||||||||||||    
T  15325434 gggaacttaaaaatgaagatttagtgagaaaa-tgttaaaactcccgagagca 15325383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16999776 - 16999828
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  16999776 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 16999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 46044478 - 46044530
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  46044478 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 46044530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 47870647 - 47870699
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  47870647 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 47870699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 324; Significance: 0; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 20 - 551
Target Start/End: Original strand, 34279 - 34808
Alignment:
Q  20 aaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaag 119  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| |||||||||||||    
T  34279 aaactttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaag 34378  T
Q  120 ggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctat 219  Q
     |||||  |||||||||||||||||||||||  | ||||||||||||||| |||| ||||||||||||||||||||||||| |||||  |||||||| ||    
T  34379 agaattaaggagcttaaaaatgaggatttagtca-aaaaatgtcaaaactaccgatagcagcaattttctgctcgccacggcgaacggcttactcgccat 34477  T
Q  220 agcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaagtactgttg 319  Q
     || ||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  34478 cgcaagtagcctatttctttgagcttgccatagcgagcagtgcactcgcctggcgagttgcacagtgactgaagccgcatctgtgttttgagtactattg 34577  T
Q  320 ggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgc 419  Q
    | |||||||||||||||||||||||||||| |||| |||||||||| |||| | ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  34578 gattggattctttgggtagaataaataattgtgataaattatgttaatttatcagagctgttgatttgaatat-attgattgttggttgctgatttatgc 34676  T
Q  420 ataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaata 519  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||||||    
T  34677 atagttgcatttaaatagaatatacatgttgttggattccattgtcaaaagtcgtcgtgtcacgagttgaccatgttgaggtgtaagacatatttaaata 34776  T
Q  520 tgcattgttgagtagtagttgttgatgtccat 551  Q
    |||| ||||||||||||||||| | |||||||    
T  34777 tgcactgttgagtagtagttgtcgttgtccat 34808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 45 - 97
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  45 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 6204 - 6254
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  6204 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 6254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 17 - 551
Target Start/End: Original strand, 21980394 - 21980946
Alignment:
Q  17 gagaaaccttgatttttaaaat-gttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaa 115  Q
    |||||| | |||||||| |||| |||||| |||| |||  ||||||| |||||||||||||| | ||||||||  |||||| | |||||| || ||||||    
T  21980394 gagaaaacatgatttttcaaattgttgttataggacgtgggttggatggttttgagtgcctggatatgtatagataggactagtcaagtttttggatcaa 21980493  T
Q  116 aaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcg 215  Q
    |||||| ||  |||||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||  |   || |||||||    
T  21980494 aaaggggatcagggagcttaaaaatgaggatttagtgtgaaaaatatcaaaactcccgagagcagctattttctgctcgccacgacgtgtgacttactcg 21980593  T
Q  216 ctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtttt------- 308  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||           
T  21980594 ccatagcgagtagcccatttccttgagctcgccatcgcgagcagtgcactcgcctggcgagttgcacagtggctgaagccgcatctgtgttttgtgtacc 21980693  T
Q  309 -------aagtactgttgggttggattctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgatt 400  Q
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  21980694 ttgtagcgtgtactcttgggttggattctttgggtagaataaataattatgattaattatgttatttttaccagagctgctgatttgaatatgattgatt 21980793  T
Q  401 gttgattgctgatttatgcataattgcatttaaat-agaatatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttga 498  Q
    |||||||| ||||||||| |||||||||||||| | | || |||| ||||||||| |||||||| |||||||||||||| || |||||||||||||| ||    
T  21980794 gttgattgttgatttatgtataattgcatttaattaaaaaaatacaaagttgttgaattccattttcaaaagttgttgtatcacgagttgaccatgtgga 21980893  T
Q  499 ggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    | ||||||  ||||||||||||||| ||||| ||||||| ||| | |||||||    
T  21980894 gatgtaagtcatatttaaatatgcactgttgtgtagtagatgtcgttgtccat 21980946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 26 - 543
Target Start/End: Complemental strand, 7785853 - 7785337
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||| ||||||| || | |||| ||||||| ||||||| || | | |  | | ||| ||||||||| | | || |||||||||||||   |||    
T  7785853 tgatttttaaattgttgttataagacgtaagttggatggttttgaatgaccggatgtttttagagaggactggaccaatttttagatcaaaaagatgatt 7785754  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcga 224  Q
     |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||| |||| |   |||||| || ||||    
T  7785753 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca-caattttcctgctcgccacggcgaacaacgaactcgccatcgcga 7785655  T
Q  225 gtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggt 322  Q
    ||||||| ||| ||| |||||||||| |||||| | ||||||||| | ||||||||| |||||||||| ||||||||||   ||| | || ||||| |||    
T  7785654 gtagccc-ttttcttcagctcgccattgcgagcaaatgcactcgcctcgcgagttgctcagtggctgagagccgcatctacttttgatgtgctgtttggt 7785556  T
Q  323 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 422  Q
    |||| |  |||||||   | ||||||| |||||||||||  ||||||| | |||  | ||||||| |||||| |||||||||||||  |||||| | |||    
T  7785555 tggaat-gttgggta-ttttaataattctgattaattataatattttatcagagtcgctgatttgcatatgaatgattgttgattgtggatttaagtata 7785458  T
Q  423 attgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 522  Q
    ||||||| |||||| | |||||||||||||| ||| || |||   | ||||| |||| || ||||||||||||||| |  ||||  ||||||| ||||||    
T  7785457 attgcatgtaaataaattatacaagttgttgaatttcaatgttggatgttgtggtgttgctagttgaccatgttgatgcataagtcatatttatatatgc 7785358  T
Q  523 attgttgagtagtagttgttg 543  Q
    ||||||| ||||||| |||||    
T  7785357 attgttgtgtagtagatgttg 7785337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 330 - 551
Target Start/End: Original strand, 21559137 - 21559353
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 428  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |       ||||  ||||||||    
T  21559137 tttgcgtagaataaataattatgattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgagt-------tatgtgtaattgca 21559229  T
Q  429 tttaaatagaatatacaa-gttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    |||||||| ||||||||| ||||||| || ||||||||||||||||||||||| | ||||| |||||||||||| ||||  ||||||||||||||| | |    
T  21559230 tttaaataaaatatacaaagttgttgaatgccattgtcaaaagttgttgtgtcacaagttgcccatgttgaggtataagtcatatttaaatatgcactat 21559329  T
Q  528 tgagtagtagttgttgatgtccat 551  Q
    || ||||||| ||| | |||||||    
T  21559330 tgtgtagtagatgtcgttgtccat 21559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 21553773 - 21553944
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| ||||||| ||| |||| |||  ||||||| |||||||||||||| | |||||||| ||||| |||||||||| || ||| |||||||| | | ||    
T  21553773 ttttcaaaatgtcgttataggacgtgggttggatggttttgagtgcctggatatgtatagagaggattgggcaagtttttggatgaaaaaggggactagg 21553872  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacgg 200  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  21553873 gagcttaaaaatgaggatttagtgtgaaaaatgtcaaaactcctgagagtagctattttctgctcgccacgg 21553944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 26706943 - 26706788
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| ||||||||    
T  26706943 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgttcgccacg----------tactcgccatagcgag 26706854  T
Q  226 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 291  Q
    |||| ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| |||||    
T  26706853 tagctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctga 26706788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 26976677 - 26976522
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| ||||||||    
T  26976677 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgttcgccacg----------tactcgccatagcgag 26976588  T
Q  226 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 291  Q
    |||| ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| |||||    
T  26976587 tagctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctga 26976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 15193613 - 15193677
Alignment:
Q  125 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  15193613 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcatttttct 15193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18819469 - 18819417
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18819469 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 18819417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 21901476 - 21901528
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21901476 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21901528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 22232334 - 22232403
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  22232334 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 22232403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 22237487 - 22237556
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  22237487 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgatcgcc 22237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 427751 - 427699
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  427751 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 427699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 757917 - 757981
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  757917 cttagaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 757981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21495427 - 21495375
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  21495427 gggagcttataaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21889116 - 21889064
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  21889116 gggagcttaaaaatgcggatttagtgagaaaaatgtcaaaactcccgagagca 21889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 23443797 - 23443849
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23443797 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23443849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 21559001 - 21559083
Alignment:
Q  209 ttactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcg-agttgcacagtggctga 291  Q
    |||||||| ||||| ||||||| ||||| ||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||    
T  21559001 ttactcgccatagcaagtagcc-atttctttgagctcgccctagagagcagtgcactcgcctggcgaagttgcacagtggctga 21559083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 23561209 - 23561260
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23561209 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23561260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 20843594 - 20843544
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  20843594 gagcttaaaaatgatgatttagtgagaaaaatgtcaaaactcccgagagca 20843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 22500166 - 22500240
Alignment:
Q  107 ttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||||||||||||   | |||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  22500166 ttagatcaaaaagttgaatggggaacttggaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagc 22500240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17022394 - 17022446
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  17022394 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactaccgagagca 17022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21830067 - 21830015
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21830067 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21830015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 22380006 - 22379954
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22380006 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 22379954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 25014114 - 25014066
Alignment:
Q  130 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 178  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  25014114 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 25014066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 26753929 - 26753854
Alignment:
Q  401 gttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttg 476  Q
    |||||||||||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||| || |||||||    
T  26753929 gttgattgctgatttatgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttg 26753854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 6404113 - 6404165
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  6404113 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 6404165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 27635489 - 27635543
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||||    
T  27635489 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 27635543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 27869566 - 27869616
Alignment:
Q  492 atgttgaggtgtaagatatatttaaatatgcattg-ttgagtagtagttgt 541  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  27869566 atgttgaggtgtaagacatatttaaatatgcactgtttgagtagtagttgt 27869616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 10035678 - 10035625
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaa-tgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| || ||||| ||||||||||||||||||||    
T  10035678 gggagcttaaaaatgaagatttagtgaaaaaaaatgtcaaaactcccgagagca 10035625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 20938161 - 20938112
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||    
T  20938161 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgaga 20938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 10035575 - 10035528
Alignment:
Q  239 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  10035575 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 10035528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 19801540 - 19801583
Alignment:
Q  136 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  19801540 aaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagca 19801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 20990824 - 20990763
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 188  Q
    ||||||||| || ||| | || || |||||||||||||||||||||||||||| | ||||||    
T  20990824 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagcacctattttc 20990763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 543
Target Start/End: Complemental strand, 21624850 - 21624770
Alignment:
Q  465 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatgcattgttgagtagtagttgttg 543  Q
    ||||||||| |||||| | ||||||| ||||||| |||||||  |||||  || ||||||||||||||| || ||||||||    
T  21624850 caaaagttgctgtgtcacaagttgacaatgttgaagtgtaagtcatattcatatatatgcattgttgagcagcagttgttg 21624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 21889012 - 21888967
Alignment:
Q  241 agctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  21889012 agctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 21888967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 5337989 - 5338041
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  5337989 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 5338041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 21901550 - 21901625
Alignment:
Q  210 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagt 285  Q
    ||||||| || ||||||| ||  |||||| |||||||||||||||||| | |||||||||| |||||||||| ||||    
T  21901550 tactcgccatggcgagtaaccgttttcct-gagctcgccatagcgagcaaatgcactcgcgaggcgagttgcccagt 21901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 22312462 - 22312494
Alignment:
Q  147 ttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||||||||||||||||||||    
T  22312462 ttagtgagaaaaatgtcaaaactcccgagagca 22312494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 23075927 - 23075979
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  23075927 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 23075979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 24058118 - 24058066
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  24058118 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 24058066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 25420344 - 25420292
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  25420344 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 25420292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 39608508 - 39608560
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  39608508 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 39608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 29 - 537
Target Start/End: Original strand, 15488 - 15996
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| |||| |||||| |||| |||  |||||||  ||||||||||||| |  | ||||| ||||||||| |||||| ||||||||||||| | ||| ||    
T  15488 ttttcaaaacgttgttataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggactggtcaagtttttagatcaaaaagaggattagg 15587  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| || |||||||||||    
T  15588 gagcttgaaaatgaggatttagtgagaaaaatgtcaaaactcccaagagcagcaattttctgctcgccacggcgaacaacttacttgccatagcgagtag 15687  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttaagtactgttgggttggatt 328  Q
    || |||| |||||||||||| ||||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  15688 cctattttcttgagctcgccttagcgagcagtgcactcacctggccagttgtacagtggctgaagccgcatctgtgttttaagtattgttaggttgga-t 15786  T
Q  329 ctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 427  Q
    | || |||||||||||| |||||||||||||||| || ||||||  ||| || ||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  15787 ccttaggtagaataaatgattatgattaattatgctatttttactagagttgctgatttgaatatgattgattgatgattgttgatctatgtataattgc 15886  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    || |||||| | |||||||||||||| ||| ||||||| || |||||||| || |   ||||||||||||| || ||||  ||||||| ||||||| |||    
T  15887 atgtaaataaattatacaagttgttgaatttcattgtcgaaggttgttgtatcactgtttgaccatgttgaagtataagtcatatttatatatgcactgt 15986  T
Q  528 tgagtagtag 537  Q
    || |||||||    
T  15987 tgtgtagtag 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 213; Significance: 1e-116; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 100 - 551
Target Start/End: Complemental strand, 10253 - 9803
Alignment:
Q  100 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacg 199  Q
    |||||| ||||||||||||| | ||| |||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||||||||||    
T  10253 caagtttttagatcaaaaagaggattagggagcttaaaaatgaagatttagtcacaaaa-tgtcaaaactcccgagagcagcaattttctgctcgccacg 10155  T
Q  200 gtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcat 299  Q
    | |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  10154 gcgaacgacttactcgccatagcgagtagcccatttccttgagctcgccatcgcgagcagtgcactcgcctggcgagttgcacagtagctgaagccgcat 10055  T
Q  300 ctgtgttttaagtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgat 399  Q
    ||||||||| ||||||||| |||||||||| | | |||| | ||||||||||||||||||||| ||||||||| || |||  || |||||||||||||||    
T  10054 ctgtgttttgagtactgtttggttggattc-tcgtgtaggacaaataattatgattaattatgctattttaccagaactgcagagttgaatatgattgat 9956  T
Q  400 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttga 498  Q
    ||||||||| || || ||| ||| ||  ||||||||| | |||||||||| ||  || ||||||| |||| ||||||||||| | | ||||| |||||||    
T  9955 tgttgattgttgtttgatgtatatttatatttaaataaattatacaagtttttaaataccattgtacaaaggttgttgtgtcacaaattgacaatgttga 9856  T
Q  499 ggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||  ||   ||||||| || ||||| ||||||| ||||| |||||||    
T  9855 ggtgtaagtcatgaataaatatacactgttgtgtagtagatgttgttgtccat 9803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 4622 - 4674
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  4622 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 17 - 529
Target Start/End: Original strand, 31801 - 32316
Alignment:
Q  17 gagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttt--tgagtgcctgaacatgtatagggaggactgggcaagttgttagatca 114  Q
    |||||| | ||||||||||||||||||| || | |||| ||||||| ||||  |||||||||| |  | | | | ||||||||||| | || |||||| |    
T  31801 gagaaatcatgatttttaaaatgttgttataagacgtaagttggatggtttgttgagtgcctggatgtttttggagaggactgggccaatttttagatta 31900  T
Q  115 aaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactc 214  Q
    ||||    ||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | ||||||    
T  31901 aaaatatgattagggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactc 32000  T
Q  215 gctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagta 313  Q
    |  ||||||||||||| |||| |||||| ||||||||||||||| ||||||||| ||||||||||| || ||||||| |||||||| ||   |||| |||    
T  32001 gtcatagcgagtagcctattttcttgagttcgccatagcgagcaatgcactcgcctggcgagttgctcaatggctgagagccgcatttg-cctttatgta 32099  T
Q  314 ctgttgggttggattctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgattgttgattgctga 412  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| || |||||||||| |||||||||| |||||| |||    
T  32100 ctgttgggttggattcttt-ggtagaataaataattatgattaattgtgttatttttaccagagttgctgatttgaatttgattgattgatgattgttga 32198  T
Q  413 tttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaag-ttgttgtgtcgcgagttgaccatgttgaggtgtaagatata 511  Q
    | |||| |||||||||| | |||| | |||||||||||||| |||||||||| ||| | |||||||||| | ||||||| |||| |||||||||   |||    
T  32199 tctatgtataattgcatgttaataaattatacaagttgttgaattccattgttaaaggtttgttgtgtcactagttgactatgtggaggtgtaaatcata 32298  T
Q  512 tttaaatatgcattgttg 529  Q
    || | |||||||||||||    
T  32299 ttcatatatgcattgttg 32316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 295
Target Start/End: Original strand, 204714 - 204998
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| || |||||||||||||||| || |    
T  204714 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtgtgttggatggttttgagtgcctggacatgtacagagaggactgggcaagtttttgg 204813  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||||| |||  ||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| |||||||||||| ||  || ||    
T  204814 atcaaaaaggggattaaggagcttaaaaatgaggatttagtgtgaaaaatgtcaaaacttccgagagcagctattttttgctcgccacggcgagtgactt 204913  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagcc 295  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  204914 actcgccatagcgagttgcccattttcttgagctcgccatagcgagcagtgcactcacctggcgagttgcacaatggctgaagcc 204998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 26 - 285
Target Start/End: Complemental strand, 384830 - 384581
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg-gaat 124  Q
    ||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||||||||||||||  | || |||||| ||||||  |||     
T  384830 tgattttcaaattgttgttataagatgtaagttggatagttttgagtgcctggatgtttttagggaggactgggacaatttttagattaaaaagatgaaa 384731  T
Q  125 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcg 223  Q
      |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| | |||||||||          ||||||| ||| ||    
T  384730 --gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcgtactcgccacg----------tactcgccataacg 384643  T
Q  224 agtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    |||| ||||||| |||||| ||||||||||||| || || ||||||| |||||||||| ||||    
T  384642 agtaacccattt-cttgagttcgccatagcgagtagatgtactcgcgaggcgagttgcccagt 384581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 327312 - 327260
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  327312 gggaacttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 327260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 321624 - 321572
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| | ||| | |||||||||||||||||| |||||||||    
T  321624 gggaacttaaaaatgaagtttttgtgagaaaaatgtcaaaacttccgagagca 321572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 12 - 551
Target Start/End: Original strand, 11075 - 11614
Alignment:
Q  12 agagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttaga 111  Q
    ||||| |||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| |||||    
T  11075 agagaaagaaactttgatttttaaaatgttgttt-aggtagtatgttggatggttttgagtgcctagatgtttatggagaggactgatcaagtttttaga 11173  T
Q  112 tcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatta 211  Q
    |||||||| | ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||| || |||| | |||    
T  11174 tcaaaaagaggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccaaggagaacaactta 11273  T
Q  212 ctcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-tttta 309  Q
    ||||| ||||||||||||| |||| |||||| ||||| |||||||| | ||||||||| | ||||||||| |||| |||||||||||||||||| ||||     
T  11274 ctcgccatagcgagtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcagtagctgaagccgcatctgtgtttttg 11372  T
Q  310 agtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgc 409  Q
    | ||||||| ||||||| || | | |||| | |||||| ||||| |||||||| ||||||||| ||||||  || ||||||||||||||||||||||||     
T  11373 aatactgtttggttgga-tcctcgtgtaggacaaataactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgttgattgt 11471  T
Q  410 tgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat 508  Q
    |  || ||| ||| ||  ||||||||| | |||||||||| ||| || ||||||| |||| || |||||||| | | | ||| |||||||||||||||      
T  11472 tatttgatgtatatttatatttaaataaagtatacaagtttttgaataccattgtacaaaggtcgttgtgtcacaaatagacaatgttgaggtgtaagtc 11571  T
Q  509 atatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||   ||||||||||  |||| ||||||| ||||| |||||||    
T  11572 atgaataaatatgcacggttgtgtagtagatgttgctgtccat 11614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 9e-96; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 29 - 551
Target Start/End: Complemental strand, 17526977 - 17526456
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||||||||||||||| |||| || | ||||||| |||||||||||||| |  | | ||| ||||||||||| | || ||||||||||||||| |||  |    
T  17526977 tttttaaaatgttgttataggacgaaagttggatggttttgagtgcctggatgtttttagagaggactgggccaatttttagatcaaaaaggggattacg 17526878  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||| || ||| |||||||||||||  ||| |  ||||||| |||||||||||    
T  17526877 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagcaccattttcctgctcgccacggcaaacaacgtactcgccatagcgagtag 17526778  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttaagtactgttgggttgga 326  Q
    ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||  |   ||||  ||||||||||||||||    
T  17526777 cccttttccttgagctcgccatagcgagctgtgcactcgcctggcgagttgcacagtggctgagagccgcattggcatttttgtgtactgttgggttgga 17526678  T
Q  327 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattg 426  Q
       ||| ||||  || ||||||  ||||||||||| |||||||| | ||| || |||||||| ||||| |||||| || |||  || ||||| |||| ||    
T  17526677 --attttggta-tattaataatcctgattaattatattattttatcagagttgctgatttgagtatgaatgattgctggttgtggaattatgtataactg 17526581  T
Q  427 catttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattg 526  Q
    ||| |||||| | |||||||||| ||| ||||||||||| || |||||||| | || ||||||||||||||| |||||||  ||||||| ||||||| ||    
T  17526580 catgtaaataaattatacaagttcttgaattccattgtcgaaggttgttgtattgctagttgaccatgttgatgtgtaagtcatatttatatatgcactg 17526481  T
Q  527 ttgagtagtagttgttgatgtccat 551  Q
     || ||||||| ||| | |||||||    
T  17526480 ctgtgtagtagatgtagctgtccat 17526456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 12 - 551
Target Start/End: Original strand, 23620590 - 23621129
Alignment:
Q  12 agagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttaga 111  Q
    ||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| |||||    
T  23620590 agagaaagaaactttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttaga 23620689  T
Q  112 tcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatta 211  Q
    |||||||| | ||| |||||||||||||||  ||||||| | |||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||    
T  23620690 tcaaaaagaggattagggagcttaaaaatggagatttagtgtgaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaactta 23620789  T
Q  212 ctcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-tttta 309  Q
    ||||| ||||||||||||| |||| |||||| ||||| |||||||| | |||| |    | ||||||||| |||| |||||||||||||||||| ||||     
T  23620790 ctcgccatagcgagtagcctattttcttgagttcgcc-tagcgagcaaatgcatttttctcgcgagttgctcagtagctgaagccgcatctgtgtttttt 23620888  T
Q  310 agtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgc 409  Q
    | ||||||| ||||||| || | | |||| | |||||| ||||| |||||||| |||| | || ||||||  || ||||||||||||||||||||||||     
T  23620889 aatactgtttggttgga-tcctcgtgtaggacaaataactatgaataattatgctattgtcccagagctgcagagttgaatatgattgattgttgattgt 23620987  T
Q  410 tgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat 508  Q
    || || ||| ||| ||  ||||||||| | |||||||||| ||| || ||||||| ||||  |||||||||| | | ||||| |||||||||| ||||      
T  23620988 tgtttgatgtatatttatatttaaataaattatacaagtttttgaataccattgtacaaagtttgttgtgtcacaaattgacgatgttgaggt-taagtc 23621086  T
Q  509 atatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |    |||||||||| ||||| ||||||| ||||| |||||||    
T  23621087 aggaataaatatgcactgttgtgtagtagatgttgttgtccat 23621129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 129 - 462
Target Start/End: Original strand, 9185447 - 9185766
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||||| || |||  |||||||||||          ||||||| ||||||||||     
T  9185447 gagcttaagaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcattttcttgctcgccacg----------tactcgccatagcgagtaa 9185536  T
Q  229 cccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttgggttgga 326  Q
    ||||||| |||||| |||||||||||||||| || ||||||| |||||||||| | ||  |||||||||  | | ||| ||| | || |||| |||||||    
T  9185537 cccattt-cttgagttcgccatagcgagcagatgtactcgcgaggcgagttgccctgtacctgaagccgtttttatgtatttgaatattgtt-ggttgga 9185634  T
Q  327 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattg 426  Q
    |  |||| |||| | ||||| |||||||||||| || ||||||||| |||||||||| || | ||||||  ||||||||||| ||  ||||| ||| ||     
T  9185635 t--tttgtgtaggacaaatagttatgattaattgtgctattttaccggagctgttgaattaagtatgatgaattgttgattgttg--ttatgtatattta 9185730  T
Q  427 catttaaatagaatatacaagttgttggattccatt 462  Q
     ||||||||| | |||||||||||||| ||| ||||    
T  9185731 tatttaaataaattatacaagttgttgaatttcatt 9185766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 1584513 - 1584427
Alignment:
Q  465 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||| |||||||    
T  1584513 caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgcactgttgagtagtagatgttgttgtccat 1584427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 536
Target Start/End: Original strand, 1590337 - 1590525
Alignment:
Q  351 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 449  Q
    |||||||||||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||| || | |||| || |||  ||||||||| | |||| |||||    
T  1590337 tgattaattatgttgtttctaccagagttgttgatttgattatggttgattattgattgttgttctatgtatgattatatttaaataaattataaaagtt 1590436  T
Q  450 gttggattccattgt--caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagta 536  Q
    |||| ||  ||||||  |||||||||||||||| | || |||| ||||||| |||||||  ||||||||||||||| ||||| ||||||    
T  1590437 gttgaatgtcattgtaacaaaagttgttgtgtcacaagatgacaatgttgaagtgtaagtcatatttaaatatgcagtgttgtgtagta 1590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 18138221 - 18138068
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||||||||||| || |  ||| ||||||| |||||||||||||  || | | ||| |||| |||||| | || |||||| |||||    |||    
T  18138221 tgatttttaaaatgttgttataagatgtaagttggatggttttgagtgcctagacgtttttagagagggctgggccaatttttagattaaaaaaatgatt 18138122  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18138121 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 1639354 - 1639268
Alignment:
Q  465 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||  ||||||| ||||| |||||||    
T  1639354 caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgcactgttatgtagtagatgttgttgtccat 1639268  T

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Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19468385 - 19468333
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19468385 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19468333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 1593308 - 1593249
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  1593308 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 1593249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 19819458 - 19819409
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19819458 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 19819409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14615899 - 14615951
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14615899 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14615951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19451836 - 19451784
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  19451836 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 22798135 - 22798187
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  22798135 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 22798187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23105754 - 23105702
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23105754 gggagtttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 18786634 - 18786579
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagca 182  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||    
T  18786634 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagca 18786579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 21724377 - 21724436
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||  ||||||| |||||    
T  21724377 aaatgaggatttagtgagaaaaatgtcaaaacacccgagagcagcctttttctgttcgcc 21724436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 24721159 - 24721108
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  24721159 ggagcttaaaaatgaagatttagtgagaaaaatgttaaaactcccgagagca 24721108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 17414556 - 17414503
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    ||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  17414556 ggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 17414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 21476885 - 21476796
Alignment:
Q  90 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  21476885 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 21476796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 480
Target Start/End: Complemental strand, 22346981 - 22346892
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    |||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||||| | |||| || || |||||||||||    
T  22346981 atgactgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttggaattcattatcgaaggttgttgtgtc 22346892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Original strand, 17026988 - 17027068
Alignment:
Q  400 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    ||||||||| ||||||||| |||||| || ||||||| | |||||||||||||| | | ||||||| || |||||||||||    
T  17026988 tgttgattgttgatttatgtataattacacttaaataaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc 17027068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 18315593 - 18315645
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  18315593 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 18315645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19588198 - 19588250
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||||||||||    
T  19588198 gggaacttaaaaatgtggttttagtgagaaaaatgtcaaaactcccgagagca 19588250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 22907521 - 22907469
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22907521 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22907469  T

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Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 26418278 - 26418330
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  26418278 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 26418330  T

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Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 14374942 - 14374989
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  14374942 cttaaaaatgaggttttagtgagaaaaatgtcaaaactcccgatagca 14374989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 23233035 - 23233082
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  23233035 cttaaaaatgaagatttagtgagaaaaatgtcaaaactccagagagca 23233082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 18315667 - 18315737
Alignment:
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    |||||| |||||||||  ||| ||| | ||||||||||||||||||||| |||||||||| ||||||||||    
T  18315667 actcgccatagcgagtgaccctttttcctgagctcgccatagcgagcagatgcactcgcgaggcgagttgc 18315737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 933903 - 933955
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||| |||||||    
T  933903 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcctgagagca 933955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 13940956 - 13940905
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  13940956 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactcccgagagca 13940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19727173 - 19727121
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||  | ||| ||||||| ||||||||||||||||||||||||||||    
T  19727173 gggagcttaggattgatgatttagtgagaaaaatgtcaaaactcccgagagca 19727121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 21470347 - 21470295
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| | ||||| ||| ||||||||||||||||||||||||    
T  21470347 gggagcttaaaattgaagttttagtgaggaaaatgtcaaaactcccgagagca 21470295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 23234542 - 23234594
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  23234542 gggagcttagaattgatgttttagtgagaaaaatgtcaaaactcccgagagca 23234594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 27767884 - 27767832
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  27767884 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 27767832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 2708925 - 2708882
Alignment:
Q  133 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||    
T  2708925 ttaaaaatgaagatttagtgagaaaaatgtcgaaactcccgaga 2708882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 1584566 - 1584517
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaat 440  Q
    |||||||||||||||||| ||| ||||| || |||| |||||||||||||    
T  1584566 atgattgattgttgattgttgaattatgtatgattgtatttaaatagaat 1584517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 1639407 - 1639358
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaat 440  Q
    |||||||||||||||||| ||||||||| || |||| ||||||||| |||    
T  1639407 atgattgattgttgattgttgatttatgtatgattgtatttaaataaaat 1639358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 21470274 - 21470225
Alignment:
Q  210 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag 259  Q
    ||||||| |||||||||| ||||||| || ||| ||||||||||||||||    
T  21470274 tactcgccatagcgagtaacccattttctggagttcgccatagcgagcag 21470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 25773271 - 25773183
Alignment:
Q  90 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||| ||| | ||||| ||||||| ||||||||||||||||||||    
T  25773271 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaattgaagttttagtgagaaaa-tgtcaaaactcccgagagca 25773183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 28289814 - 28289882
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| ||||||| |||| ||||||||||||||| || ||||||| |||||    
T  28289814 gggagcttagaattgatgatttagtgagaaaa-tgtcgaaactcccgagagcaccacttttctgttcgcc 28289882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 28359463 - 28359500
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtca 164  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  28359463 gggagcttagaaatgaggatttagtgagaaaaatgtca 28359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 1584841 - 1584793
Alignment:
Q  100 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggattt 148  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||    
T  1584841 caagtttttggatcaaaaagggaattaggaagcttaaaaatggggattt 1584793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 12446827 - 12446879
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  12446827 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 12446879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 13127907 - 13127959
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| ||||||    
T  13127907 gggagcttagaattgaggtttgagcgagaaaaatgtcaaaactcccaagagca 13127959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 14724747 - 14724683
Alignment:
Q  393 gattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggatt 457  Q
    |||||||||||| ||| ||||||||| |||||| || ||||||| | ||| ||| ||||||||||    
T  14724747 gattgattgttggttgttgatttatgtataattacacttaaataaattatgcaaattgttggatt 14724683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17207369 - 17207421
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  17207369 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 17207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 153; Significance: 8e-81; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 311 - 537
Target Start/End: Complemental strand, 7498 - 7270
Alignment:
Q  311 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgc 409  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  7498 gtactgttgggttggattctttaggtagaataaataattaggattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgattgt 7399  T
Q  410 tgatttatgcataattgcatttaaatagaatatacaa-gttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat 508  Q
    ||| ||||| |||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||      
T  7398 tgacttatgtataattgcatttaactaaaatatacaaagttgttgaattccattgtcaaaagttgttgtgtcacgagttgaccatgttgaggtgtaagtc 7299  T
Q  509 atatttaaatatgcattgttgagtagtag 537  Q
    |||||| |||||||||||| | |||||||    
T  7298 atatttcaatatgcattgtagtgtagtag 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 29 - 402
Target Start/End: Complemental strand, 938 - 565
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||||| ||||||||  |||||| ||| ||||||||| | ||| ||    
T  938 tttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatagagaggactgatcaagtttttatatcaaaaagaggattagg 839  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||| ||||||||||     
T  838 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcgagtat 739  T
Q  229 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttaagtactgttgggttgga 326  Q
    || |||| |||||| ||||| |||||||| | ||||||||| | |||||||||  ||| ||||||| |||||||||| |||| | ||||||  |||||||    
T  738 cctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgcttagtagctgaagtcgcatctgtgtttttgaatactgtgtggttgga 640  T
Q  327 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgt 402  Q
    ||| | | |||| | |||| | |||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  639 ttc-tcgtgtaggacaaatgaatatgattaattatgctattttaccagagctgctgagttgaatatgattgattgt 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 29 - 551
Target Start/End: Complemental strand, 189421 - 188899
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| ||||||||||| |||| | |  ||||||| |||||||||||||| |  | | ||| |||||||| ||||||| ||||||||||||||  ||| ||    
T  189421 ttttcaaaatgttgttataggacatgagttggatggttttgagtgcctggatgtatttagagaggactgtgcaagtttttagatcaaaaaggagattagg 189322  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    ||| |||||||||| ||||||  |||||||| ||||||||||| ||||||| || ||||||||||||| ||| |||| | |||||||| |||| ||||||    
T  189321 gagattaaaaatgaagatttactgagaaaaaagtcaaaactcctgagagcaccatttttctgctcgccgcggcgaacaacttactcgccatagtgagtag 189222  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttaagtactgttgggttggat 327  Q
    ||| ||| ||  |||||||||||||||||   |||||||| |||||||||||||||||||||| || ||||| ||  ||||  ||||||||||| ||||     
T  189221 ccctttttctgaagctcgccatagcgagctaggcactcgcctggcgagttgcacagtggctgagagtcgcatttgcattttgtgtactgttgggctggaa 189122  T
Q  328 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 427  Q
    || ||||||| | ||||||||  ||||||||||| |||||||| | ||| || ||||||||  |||| |||||  || |||  |||||||| ||||||||    
T  189121 tc-ttgggtatattaaataatcctgattaattatattattttatcagagttgctgatttgagcatgaatgattactggttgtggatttatgtataattgc 189023  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    || ||| || | |||||||||||||  ||| ||| ||| || |||||||| | || |||||| |||||||| |||||||  ||||||| ||||||| |||    
T  189022 atgtaattaaattatacaagttgttaaatttcatagtcgaaggttgttgtattgctagttgatcatgttgatgtgtaagtcatatttatatatgcactgt 188923  T
Q  528 tgagtagtagttgttgatgtccat 551  Q
    || ||||||| ||| | |||||||    
T  188922 tgtgtagtagatgtcgttgtccat 188899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 1e-79; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 67870 - 67692
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  67870 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtacctggacatgtatagggaggactgggcaagttgttag 67771  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  67770 atcaaaaggggaattagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagctattttct 67692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 67666 - 67596
Alignment:
Q  237 cttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttt 307  Q
    |||||| || ||||||||||||||||||||| | || |||||||||||||||| ||||||||||| |||||    
T  67666 cttgagttcaccatagcgagcagtgcactcgtgaggagagttgcacagtggctaaagccgcatctatgttt 67596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 18042 - 17973
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  18042 gggagcttagaattgaagatttagagagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 90 - 523
Target Start/End: Original strand, 182487 - 182919
Alignment:
Q  90 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    ||||||||||| | || ||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||  || ||    
T  182487 gaggactgggctaatttttagatcaaaaaggggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatcttcct 182586  T
Q  190 gctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggct 289  Q
    ||| |||||   |||| | |||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  182587 gcttgccacaacgaacaacttactcgccatagcgagtagcccttctccttgagctcgccatcgcgagcagtgcactcgcctggcgagttgcacagtggct 182686  T
Q  290 ga-agccgcatct-gtgttttaagtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttg 387  Q
    || |||||||| |    ||||  ||| ||||  |||||| ||  ||||||  || |||| |  ||||||| ||| |||||||| | ||| || |||||||    
T  182687 gagagccgcatttacatttttgtgtattgttaagttggaatc--tgggta-tattaatattcctgattaagtatattattttatcagagttgctgatttg 182783  T
Q  388 aatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagtt 487  Q
     |||||| |||||||||||||  |||||||| ||||||||||  ||||| |||||||||||||||| ||| ||||||| || |||||||| | || ||||    
T  182784 catatgaatgattgttgattgtggatttatgtataattgcatgcaaataaaatatacaagttgttgaatttcattgtcgaaggttgttgtcttgctagtt 182883  T
Q  488 gaccatgttgaggtgtaagatatatttaaatatgca 523  Q
    || |||||||| |||||||  ||||||| |||||||    
T  182884 gatcatgttgatgtgtaagtcatatttatatatgca 182919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 140; Significance: 5e-73; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 111 - 551
Target Start/End: Original strand, 13471 - 13912
Alignment:
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||| | ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||| | ||    
T  13471 atcaaaaagaggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgcctaggtgaacaactt 13570  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-tttt 308  Q
    |||||| ||||||||||||| |||| |||||| ||||| |||||||| | ||||||||| | ||||||||| |||| |||||||||||||||||| ||||    
T  13571 actcgccatagcgagtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcagtagctgaagccgcatctgtgttttt 13669  T
Q  309 aagtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg 408  Q
     | ||||||| ||||||| || | | |||| | |||| | ||||| |||||||| ||||||||| ||||||  || ||||||||||||||||||||||||    
T  13670 gaatactgtttggttgga-tcctcgtgtaggacaaatgactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgttgattg 13768  T
Q  409 ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaaga 507  Q
     |  || ||| ||| ||  ||||||||| | |||||||||| ||| || ||||||| |||| || |||||||| | | | ||| |||||||||||||||     
T  13769 ttatttgatgtatatttatatttaaataaagtatacaagtttttgaataccattgtacaaaggtcgttgtgtcacaaatagacaatgttgaggtgtaagt 13868  T
Q  508 tatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
     ||   ||||||||||  |||| ||||||| ||||| |||||||    
T  13869 catgaataaatatgcacggttgtgtagtagatgttgctgtccat 13912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 133; Significance: 7e-69; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 26 - 551
Target Start/End: Original strand, 2221 - 2746
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||||||||||| || | |||| ||||||| |||| ||||||||| |  | | ||| ||||||||||| | || |||||| |||| |    ||    
T  2221 tgatttttaaaatgttgttataagacgtaagttggatggtttagagtgcctggatgtttttagagaggactgggccaatttttagattaaaatgatgttt 2320  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 225  Q
     |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||| ||||||||||| | |||| |    ||||| ||||||||    
T  2321 agggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccattttcctgctcgccacagcgaacaacgatctcgccatagcgag 2420  T
Q  226 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttaagtactgttgggtt 323  Q
    |||||| ||| ||||||||||||||||| ||| | ||||||||| | | ||||||| |||| |||||||||||||||||| |||| | ||||||| ||||    
T  2421 tagccc-ttttcttgagctcgccatagcaagcaaatgcactcgcctcgtgagttgcccagtagctgaagccgcatctgtgtttttgaatactgtttggtt 2519  T
Q  324 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 423  Q
    |||||| | | |||| | | |||||||||||||||||||  |||||||| |||||| ||  |||||||||||||||||||||||| || |||||| |||     
T  2520 ggattc-tcgtgtaggacagataattatgattaattatgcaattttaccagagctgctgcgttgaatatgattgattgttgattgttgttttatgtatat 2618  T
Q  424 ttgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 522  Q
    ||  | ||||||| | |||||||||| | | || ||||||| |||| ||||||||| |   | ||||| |||||||||||||||  ||   |||||||||    
T  2619 ttataattaaataaattatacaagttttcgaataccattgtacaaaggttgttgtg-caaaaattgacaatgttgaggtgtaagtcatgaataaatatgc 2717  T
Q  523 attgttgagtagtagttgttgatgtccat 551  Q
    | ||||| ||||||  ||||| |||||||    
T  2718 actgttgcgtagtatatgttgttgtccat 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 29 - 400
Target Start/End: Complemental strand, 5142 - 4771
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||||| |||||| |  |||||| ||||||||||||| | |||  |    
T  5142 tttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatagagaggacggatcaagtttttagatcaaaaagaggattaag 5043  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||| |||||||||||| |||  | |||||||| |||| ||||||    
T  5042 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttttgctcgccacggcgaataacttactcgccatagagagtag 4943  T
Q  229 cccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtttta-agtactgttgggttgga 326  Q
    || |||| |||||| ||||| |||||||||  ||||||||| | ||||||||| |||| ||||||| | ||||||||||||  | ||||||  ||| |||    
T  4942 cctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcagtagctgaagtcccatctgtgtttttgaatactgtgtggtcgga 4844  T
Q  327 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgatt 400  Q
    ||||  | |||| | |||| | |||||||||||||| ||||||||| |||||| |||  |||||||||||||||    
T  4843 ttctc-gtgtaggaaaaatgaatatgattaattatgctattttaccagagctgctgagatgaatatgattgatt 4771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 1e-64; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 30205975 - 30206212
Alignment:
Q  11 cagagagagaaaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttag 110  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |  | ||| | ||||||||  |||||| ||||    
T  30205975 cagagaaagaaaccttgatttttaaaatgttgttttaggtagtatgttggatgattttgagtgcctggatgtttatggagaggactgatcaagtttttag 30206074  T
Q  111 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 210  Q
    ||||||||| | ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| |  |    
T  30206075 atcaaaaagaggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacat 30206174  T
Q  211 actcgctatagcgagtagcccatttccttgagctcgcc 248  Q
    |||||| ||||||||||||| |||| |||||| |||||    
T  30206175 actcgccatagcgagtagcctattttcttgagttcgcc 30206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 11325409 - 11325615
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| ||||||||||| |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||| ||||||| ||||||||||||||| ||| ||    
T  11325409 ttttcaaaatgttgttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgagcaagtttttagatcaaaaaggggattagg 11325508  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||| || |||||||||| |||||| |||| | |||||||| |||||||||||    
T  11325509 gagcttaaaaatgaagatttagtgaaaaaaatgtcaaaactcccgagagcatcatttttctgctctccacggcgaacaacttactcgccatagcgagtag 11325608  T
Q  229 cccattt 235  Q
    |||||||    
T  11325609 cccattt 11325615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 547
Target Start/End: Complemental strand, 15232860 - 15232352
Alignment:
Q  30 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 129  Q
    ||||||| ||||| | || | |||| ||| ||| |||||||||||||| | || | ||| ||||||| ||  | || | |||| ||||||   ||| |||    
T  15232860 ttttaaattgttgctataagacgtaagttagatggttttgagtgcctggatatttttagagaggactaggacaattttcagattaaaaagatgattaggg 15232761  T
Q  130 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| |||||||||||    
T  15232760 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgatcgccacg----------tactcgccatagcgagtag 15232671  T
Q  229 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttaagtactgttgggttgg 325  Q
    | ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| ||||| |||||| | ||   ||||   ||| |||||| |||    
T  15232670 ctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctgagagccgcttttgcaattttgtatacggttgggctgg 15232572  T
Q  326 attctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataatt 425  Q
    | || |||||||  || |||||| ||||||||||||  ||||||| | ||| || ||||||| ||||||  ||||||||||||    ||||   ||||||    
T  15232571 aatc-ttgggta-tattaataatcatgattaattataatattttatctgagttgctgatttgtatatgaaggattgttgattgtgtttttaaatataatt 15232474  T
Q  426 gcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcatt 525  Q
    | ||  ||||| | |||||||||||||| ||| || |||  |  ||||| |||| || | |||| |||||||| |  ||||  ||||||| |||||||||    
T  15232473 gtatgaaaataaattatacaagttgttgaatttcaatgttgagtgttgtagtgttgctacttgatcatgttgatgcataagtcatatttatatatgcatt 15232374  T
Q  526 gttgagtagtagttgttgatgt 547  Q
    | || ||||||| |||||||||    
T  15232373 gctgtgtagtagatgttgatgt 15232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 547
Target Start/End: Complemental strand, 15238728 - 15238220
Alignment:
Q  30 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 129  Q
    ||||||| ||||| | || | |||| ||| ||| |||||||||||||| | || | ||| ||||||| ||  | || | |||| ||||||   ||| |||    
T  15238728 ttttaaattgttgctataagacgtaagttagatggttttgagtgcctggatatttttagagaggactaggacaattttcagattaaaaagatgattaggg 15238629  T
Q  130 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| |||||||||||    
T  15238628 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgatcgccacg----------tactcgccatagcgagtag 15238539  T
Q  229 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttaagtactgttgggttgg 325  Q
    | ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| ||||| |||||| | ||   ||||   ||| |||||| |||    
T  15238538 ctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctgagagccgcttttgcaattttgtatacggttgggctgg 15238440  T
Q  326 attctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataatt 425  Q
    | || |||||||  || |||||| ||||||||||||  ||||||| | ||| || ||||||| ||||||  ||||||||||||    ||||   ||||||    
T  15238439 aatc-ttgggta-tattaataatcatgattaattataatattttatctgagttgctgatttgtatatgaaggattgttgattgtgtttttaaatataatt 15238342  T
Q  426 gcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcatt 525  Q
    | ||  ||||| | |||||||||||||| ||| || |||  |  ||||| |||| || | |||| |||||||| |  ||||  ||||||| |||||||||    
T  15238341 gtatgaaaataaattatacaagttgttgaatttcaatgttgagtgttgtagtgttgctacttgatcatgttgatgcataagtcatatttatatatgcatt 15238242  T
Q  526 gttgagtagtagttgttgatgt 547  Q
    | || ||||||| |||||||||    
T  15238241 gctgtgtagtagatgttgatgt 15238220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 551
Target Start/End: Complemental strand, 13836738 - 13836629
Alignment:
Q  442 tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgt 541  Q
    |||||||||||| ||  |||||||||||||||||||||| | |||||||||||||||| |||| |  ||||||||||||||| ||||| |||||||||||    
T  13836738 tacaagttgttgaatgtcattgtcaaaagttgttgtgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgttgggtagtagttgt 13836639  T
Q  542 tgatgtccat 551  Q
    || |||||||    
T  13836638 tgttgtccat 13836629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 24284046 - 24284098
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24284046 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 24284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 15954578 - 15954640
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  15954578 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttct 15954640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 12153415 - 12153363
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12153415 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12153363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 12363933 - 12363881
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12363933 gggaacttaaaaatgaagatttagggagaaaaatgtcaaaactcccgagagca 12363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 13036600 - 13036648
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 175  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13036600 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgag 13036648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15011535 - 15011587
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15011535 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 16823426 - 16823478
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16823426 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 16823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 17496686 - 17496634
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17496686 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 17496634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 42109745 - 42109693
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42109745 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 42109693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 12855374 - 12855536
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| ||||||| || |  ||| ||||| | ||||||||||||||||  | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  12855374 tgattttcaaattgttgttataagatgtaagttggttagttttgagtgcctgaatgtttttagagaggactaggacaatttttagattaaaaagatgatt 12855473  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 188  Q
     |||||||||||||||| ||||||| |||||||||| |||||||||| |||||| || |||||    
T  12855474 agggagcttaaaaatgaagatttagtgagaaaaatggcaaaactcccaagagcaccatttttc 12855536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 10597296 - 10597365
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  10597296 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 10597365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2269877 - 2269929
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2269877 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2269929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11305386 - 11305438
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11305386 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11305438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11644433 - 11644485
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11644433 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11644485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11939528 - 11939580
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11939528 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11939580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 12355598 - 12355650
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12355598 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12355650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 12362147 - 12362199
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12362147 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12362199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 13692488 - 13692436
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13692488 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 13692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 18128186 - 18128238
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18128186 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18128238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 15934574 - 15934625
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  15934574 ggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 15934625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 14288656 - 14288706
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14288656 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 14288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 17198665 - 17198719
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17198665 gggaacttgaaaatgaggatttagtgagaaaaatgtcaaaactcccgaaagcagc 17198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 16829586 - 16829655
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||| ||  |||||| |||||    
T  16829586 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagcaccatatttctgttcgcc 16829655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 16838109 - 16838178
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||| ||  |||||| |||||    
T  16838109 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagcaccatatttctgttcgcc 16838178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 404
Target Start/End: Original strand, 30206215 - 30206347
Alignment:
Q  272 gcgagttgcacagtggctgaagccgcatctgtgtttta-agtactgttgggttggattctttgggtagaataaataattatgattaattatgttatttta 370  Q
    ||||||||| |||| ||||| | ||||||||||||||  | |||| |  |||||||||||  | |||| | |||| |||||||||||| ||| ||||||     
T  30206215 gcgagttgctcagtagctgaggtcgcatctgtgtttttgaatactttgtggttggattctc-gtgtaggacaaatgattatgattaataatgctattttg 30206313  T
Q  371 cccgagctgttgatttgaatatgattgattgttg 404  Q
    || |||||||||| |||||||||| |||||||||    
T  30206314 ccagagctgttgagttgaatatgagtgattgttg 30206347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11964554 - 11964606
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  11964554 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacacccgagagca 11964606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 12479322 - 12479374
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  12479322 gggaacttaaaaatgaagatttagtgggaaaaatgtcaaaactcccgagagca 12479374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 14293270 - 14293218
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14293270 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 14293218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 14298897 - 14298845
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14298897 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 14298845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 15519015 - 15518971
Alignment:
Q  135 aaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  15519015 aaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15518971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 18135956 - 18136008
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  18135956 gggaacttaaaaatgaagatttaatgagaaaaatgtcaaaactcccgagagca 18136008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 18718763 - 18718815
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  18718763 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 18718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 12274815 - 12274764
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||| ||||||    
T  12274815 ggagcttaaaaatgaagatttagtgagaaaaatgtcgaaactccctagagca 12274764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 12202837 - 12202791
Alignment:
Q  133 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||    
T  12202837 ttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 12202791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 12961024 - 12961069
Alignment:
Q  134 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12961024 taaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 12961069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 12255685 - 12255633
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || | | ||||||| ||||||||||||||||||||||||||||    
T  12255685 gggagcttagaatttaagatttagtgagaaaaatgtcaaaactcccgagagca 12255633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 12256130 - 12256078
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || | | ||||||| ||||||||||||||||||||||||||||    
T  12256130 gggagcttagaatttaagatttagtgagaaaaatgtcaaaactcccgagagca 12256078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14652357 - 14652409
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||| ||||||    
T  14652357 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactccctagagca 14652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18961468 - 18961416
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  18961468 gggagcttagaattgatgttttagtgagaaaaatgtcaaaactcccgagagca 18961416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 35985247 - 35985195
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | | ||| ||||||||||||||||||| ||||||||    
T  35985247 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactctcgagagca 35985195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 49163674 - 49163622
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| | || || ||||||||||||||||||||||||||||    
T  49163674 gggagcttaaaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 49163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 15011608 - 15011693
Alignment:
Q  209 ttactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagc 294  Q
    |||||||| |||||||||| |||||||| | ||| |||||||||||||||| ||  |||||| |||||||||| ||||  |||||||    
T  15011608 ttactcgccatagcgagtaacccatttc-tggagttcgccatagcgagcagatgtgctcgcgaggcgagttgcccagtacctgaagc 15011693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 16349140 - 16349079
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    ||||||||| || ||| ||||||| |||||||||||| ||||||||||||||| || ||||||    
T  16349140 gggagcttagaattgatgatttagtgagaaaaatgtc-aaactcccgagagcaccatttttct 16349079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 20376883 - 20376933
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||    
T  20376883 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagag 20376933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 523
Target Start/End: Complemental strand, 10253 - 10200
Alignment:
Q  470 gttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 523  Q
    ||||||||||| | |||||||||||||||||||||||  | || ||||||||||    
T  10253 gttgttgtgtcacaagttgaccatgttgaggtgtaagtcacatctaaatatgca 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 16382523 - 16382591
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||| | |||||||||||| ||||||||||||||| || ||||||| |||||    
T  16382523 gggagcttagaattgatgatttcgtgagaaaaatgtc-aaactcccgagagcaccatttttctgttcgcc 16382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 12419967 - 12419919
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 175  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||    
T  12419967 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgag 12419919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 15375152 - 15375100
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  15375152 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaattcccgagagca 15375100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 46070752 - 46070804
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || || || || || ||||||||||||||||||||||||||||    
T  46070752 gggagcttagaattggggtttgagtgagaaaaatgtcaaaactcccgagagca 46070804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 8205 - 7925
Alignment:
Q  17 gagaaaccttgattttt-aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaa 115  Q
    |||||| | |||||||| ||||||||||| |||| |||  |||||||  ||||||||||||| |  | ||||| ||||||||||||| || || ||||||    
T  8205 gagaaatcatgatttttcaaaatgttgttataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggactgggcaattttttggatcaa 8106  T
Q  116 aaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcg 215  Q
     ||    ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||||||||||| ||| || |||||||    
T  8105 gaaaaagattagggagcttaaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcaattattttctgctcgccacggcgaatgacttactcg 8006  T
Q  216 ctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgag-ttgcacagtggctgaagcc 295  Q
    | |||||||||||||| |||||||||||||||||| ||||||||||||||||| ||| |||  ||| ||||||||||||||    
T  8005 ccatagcgagtagcccttttccttgagctcgccatcgcgagcagtgcactcgcctggagagaatgcccagtggctgaagcc 7925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 330 - 551
Target Start/End: Complemental strand, 5746 - 5523
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc 427  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||||| ||||||| |  || |||| |||||||     
T  5746 tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtataattgt 5647  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| |  ||||||||||||||| |||    
T  5646 atttaaataaattatacaagttgttgaatgccattgacaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgt 5547  T
Q  528 tgagtagtagttgttgatgtccat 551  Q
    || ||||||||||||| |||||||    
T  5546 tgtgtagtagttgttgttgtccat 5523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 6549 - 6682
Alignment:
Q  56 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 155  Q
    ||||||| ||||||||||||||||  | | ||| |||||||| |  | || |||||| ||||||   | | |||||||||||||||| ||||||| ||||    
T  6549 gttggatagttttgagtgcctgaatgtttttagagaggactgagacaatttttagattaaaaagatgaatagggagcttaaaaatgaagatttagtgaga 6648  T
Q  156 aaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||||||||||| ||||||| || ||||||    
T  6649 aaaatgtcaaaactcctgagagcaccatttttct 6682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 541
Target Start/End: Complemental strand, 3328 - 2924
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||| ||          ||||||| ||||||||    
T  3328 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcatttttcttgctcgccgcg----------tactcgccatagcgag 3239  T
Q  226 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttgggtt 323  Q
    |||| |||||| ||||| |||||||||||||||  |||||||||| |||||||| | ||||  |||||||||  | | ||| ||| | || |||||| ||    
T  3238 tagctcatttc-ttgagttcgccatagcgagcaaatgcactcgcgaggcgagtttctcagtaactgaagccgtttatatgtatttgaatattgttgg-tt 3141  T
Q  324 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 423  Q
    ||||| |||| |||  | ||||| |||||||||||| |||||||||||| |||||||||| |||| ||||||  ||||||||||||||  ||||| |||     
T  3140 ggatt-tttgtgtatgacaaatagttatgattaattgtgttattttaccggagctgttgagttgagtatgatgaattgttgattgctg--ttatgtatat 3044  T
Q  424 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag--atatatttaaatatg 521  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||||||| ||   |||||| ||||||||||||||||  |||| | || |||||    
T  3043 ttatatttaaataaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagttgatcatgttgaggtgtaagtcatatttatatatatg 2944  T
Q  522 cattgttgagtagtagttgt 541  Q
    || |||||||||| ||||||    
T  2943 cactgttgagtagcagttgt 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 303
Target Start/End: Original strand, 26346 - 26599
Alignment:
Q  29 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 128  Q
    |||| |||||||||||||||| ||| |||||||| |||||||||||||  |||||||| | |||| ||||||||||| ||  ||||||||||||||| ||    
T  26346 ttttcaaaatgttgttttaggacgtgtgttggatggttttgagtgcctagacatgtatggagagggctgggcaagtttttgtatcaaaaagggaattagg 26445  T
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 228  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||| ||                     || |||||| |    
T  26446 gagcttaaaaatggggatttagtgtgaaaaatgtcaaaactcccgagagcagctattttctgctcacc---------------------atcgcgagttg 26524  T
Q  229 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgt 303  Q
    ||||||||||||||||||||||||||||||||||||||||  | | ||||||| |||||||||||||||||||||    
T  26525 cccatttccttgagctcgccatagcgagcagtgcactcgcccgacaagttgcatagtggctgaagccgcatctgt 26599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 141 - 307
Target Start/End: Complemental strand, 159746 - 159580
Alignment:
Q  141 gaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttg 240  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||| |||| | |||||||| |||||||||  ||| ||| ||||    
T  159746 gaggatttagtgagaaaaatgtcaaaactctcgagagcagctattttctactcgccacggcgaacaacttactcgccatagcgagttaccccttttcttg 159647  T
Q  241 agctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttt 307  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  159646 agttcgccatagcgagcagtgcactcgcgaggcgagttgcacagtggctgaagccgcatctatgttt 159580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 330 - 551
Target Start/End: Original strand, 27729 - 27952
Alignment:
Q  330 tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc 427  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||||| ||||||| |  || |||| |||||||     
T  27729 tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtataattgt 27828  T
Q  428 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 527  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| |  ||||||||||||||| |||    
T  27829 atttaaataaattatacaagttgttgaatgccattgacaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgt 27928  T
Q  528 tgagtagtagttgttgatgtccat 551  Q
    || ||||||||||||| |||||||    
T  27929 tgtgtagtagttgttgttgtccat 27952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 351 - 551
Target Start/End: Complemental strand, 34035 - 33833
Alignment:
Q  351 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 449  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||||||||| ||||||| ||   |||| ||||||  ||||||||| | ||||||||||    
T  34035 tgattaattatgttatttctactagagttgttgatttgaatatgattgattattgattgttgtcctatgtataattatatttaaataaattatacaagtt 33936  T
Q  450 gttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtc 548  Q
    |||| || ||||||| ||||| |||||||||| | ||||||| ||||||| |||||||  ||||||||||||| ||||||| ||||||| ||||||||||    
T  33935 gttgaataccattgtacaaaatttgttgtgtcacaagttgacaatgttgaagtgtaagtcatatttaaatatgaattgttgtgtagtagatgttgatgtc 33836  T
Q  549 cat 551  Q
    |||    
T  33835 cat 33833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 83; Significance: 5e-39; HSPs: 3)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 26 - 462
Target Start/End: Complemental strand, 35182 - 34759
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   |||    
T  35182 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgcctggatgtttttagagaggactgggacaattttcagattaaaaagatgatt 35083  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcga 224  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||||| |||||||||||          ||||||| |||||||    
T  35082 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgacagcaccatttttcttgctcgccacg----------tactcgccatagcga 34993  T
Q  225 gtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttgggt 322  Q
    ||| | | ||| |||||| |||||||||||||| | || ||||||| |||||||||| ||||  |||||||||  ||| ||| ||| | || |||| |||    
T  34992 gtaactccttt-cttgagttcgccatagcgagccgatgtactcgcgaggcgagttgctcagtacctgaagccgtttctatgtatttgaatattgtt-ggt 34895  T
Q  323 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 422  Q
    |||||  |||| |||| | |||||||||||| ||||| |||||||||||| |||||||||| || | ||||||  |||||||||| |||  ||||| |||    
T  34894 tggat--tttgtgtaggacaaataattatgaataattgtgttattttaccggagctgttgaattaagtatgatgaattgttgatttctg--ttatgtata 34799  T
Q  423 attgcatttaaatagaatatacaagttgttggattccatt 462  Q
     ||  ||||||||| | |||||||||||||| ||| ||||    
T  34798 tttatatttaaataaattatacaagttgttgaatttcatt 34759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 462
Target Start/End: Complemental strand, 29764 - 29518
Alignment:
Q  212 ctcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-ttta 309  Q
    ||||| |||||||||| | | |||| ||||| |||||||||||||||| ||  |||||| |||||||| | || |  |||||||||  ||| ||| |||     
T  29764 ctcgccatagcgagtaactcctttc-ttgagttcgccatagcgagcagatgttctcgcgaggcgagtttctcaatacctgaagccgtttctatgtatttg 29666  T
Q  310 agtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgc 409  Q
    | ||||||||| |||||||  ||| |||| | |||||||||||| ||||| ||||||| |||| |||||||||| || | ||||||  ||||||||||||    
T  29665 aatactgttgg-ttggatt--ttgtgtaggacaaataattatgaataattgtgttattctaccggagctgttgaattaagtatgatgaattgttgattgc 29569  T
Q  410 tgatttatgcataattgcatttaaatagaatatacaagttgttggattccatt 462  Q
    ||  ||||| ||| ||  ||||||||| | |||||||||||||| ||| ||||    
T  29568 tg--ttatgtatatttatatttaaataaattatacaagttgttgaatttcatt 29518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 29930 - 29758
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||| |||||  | | ||| |||||||| |  | || | |||| ||||||   |||    
T  29930 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgtctgaatgtttttagagaggactgtgacaattttcagattaaaaagatgatt 29831  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgcca 197  Q
     |||||||||||||||| ||||||| |||||||||||||||||  ||||||||| || ||||| |||||||||    
T  29830 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacgtccgagagcaccatttttcttgctcgcca 29758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 82; Significance: 2e-38; HSPs: 8)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 127 - 462
Target Start/End: Original strand, 21279 - 21601
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 225  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||          ||||||| ||||||||    
T  21279 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 21368  T
Q  226 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttgggtt 323  Q
    || | | |||| ||||| |||||||||||||||| || ||||| | |||||||||| ||||  |||||||||  ||| ||| ||| | ||||||||| ||    
T  21369 taactcctttc-ttgagttcgccatagcgagcagatgtactcgggaggcgagttgctcagtacctgaagccgtttctatgtatttgaatactgttgg-tt 21466  T
Q  324 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 423  Q
    |||||  ||| |||| | ||||| |||||||||||| ||||||||||||  ||||||||| || | ||||||  ||||||||||||||  ||||| |||     
T  21467 ggatt--ttgtgtaggacaaatagttatgattaattgtgttattttaccgaagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatat 21562  T
Q  424 ttgcatttaaatagaatatacaagttgttggattccatt 462  Q
    ||  ||||||||| | |||||||||||||| ||| ||||    
T  21563 ttatatttaaataaattatacaagttgttgaatttcatt 21601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 56392 - 56444
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  56392 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 56444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 147505 - 147453
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  147505 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 154692 - 154640
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  154692 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 154640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 252445 - 252393
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  252445 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 259051 - 258999
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  259051 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 258999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 187452 - 187503
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 178  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  187452 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 187503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 197079 - 197130
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 178  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  197079 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 88284 - 88168
Alignment:
Q  191 ctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctg 290  Q
    |||||||||| |||||| |||||||| |||||||||  ||| ||| |||||| ||||||||||||||||||||||| || ||| ||||||||||||||||    
T  88284 ctcgccacggcgaacgacttactcgccatagcgagttaccccttttcttgagttcgccatagcgagcagtgcactcacgaggcaagttgcacagtggctg 88185  T
Q  291 aagccgcatctgtgttt 307  Q
    ||||||||||| |||||    
T  88184 aagccgcatctatgttt 88168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 92215 - 92267
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  92215 gggagcttaaaaataaagatttagtgagaaaaatgtcaaaactcccgagagca 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 3219 - 3045
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||||||||||| || |  ||| |||| || ||||||||||||||    | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  3219 tgatttttaaaatgttgttataagatgtaagttgaatggttttgagtgcctgggtgtttttagagaggacttggacaatttttagattaaaaagatgatt 3120  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 199  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  3119 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 483 - 551
Target Start/End: Complemental strand, 5991 - 5923
Alignment:
Q  483 gagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||    
T  5991 gagttgaccatgttgaggtgtaagacatatttaaatatgcactgttgagtagtagttgtcgttgtccat 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 44752 - 44683
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| ||||||||||| ||||||| ||||||||||||||| |||||||||| |||  ||||||| |||||    
T  44752 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaagctcccgagagtagcctttttctgttcgcc 44683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 449214 - 449337
Alignment:
Q  56 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 155  Q
    ||||||| |||||||||||||||| || | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||||| | ||||| ||||    
T  449214 gttggatagttttgagtgcctgaatatttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatgaagttttagtgaga 449313  T
Q  156 aaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||||||||||    
T  449314 aaaatgtcaaaactcccgagagca 449337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 96408 - 96358
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  96408 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 96358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 179506 - 179463
Alignment:
Q  136 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  179506 aaaatgaagatttagtgagaaaaatgacaaaactcccgagagca 179463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 203 - 50
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  203 tgattttcaaattgttgttataagatgtaagttggatagttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 104  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  103 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 452
Target Start/End: Original strand, 8000 - 8414
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||| |||||  | | ||| ||||||||||  | || | |||| ||||||   |||    
T  8000 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgtctgaatgtttttagagaggactgggacaattttcagattaaaaagatgatt 8099  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatg-tcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcg 223  Q
     |||||||||||||||| ||||||| || ||||| | |||||||||||||||||| || ||||| |||| ||||||          ||||| | ||||||    
T  8100 agggagcttaaaaatgaagatttagtgaaaaaaaaggtcaaaactcccgagagcaccatttttcttgctagccacg----------tactctccatagcg 8189  T
Q  224 agtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttaagtactgttggg 321  Q
    |||| | | ||| |||||| ||||||||  |||||| || ||||||| |||||||||| ||||  |||||||||  ||| ||| ||| | || |||| ||    
T  8190 agtaactccttt-cttgagttcgccatattgagcagatgtactcgcgaggcgagttgctcagtacctgaagccgtttctatgtatttgaatattgtt-gg 8287  T
Q  322 ttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcat 421  Q
    ||||||  |||| |||| | |||||||||||| ||||| ||||||| || | | |||||||| || | ||||||  ||||||||||||||  ||||| ||    
T  8288 ttggat--tttgtgtaggacaaataattatgaataattttgttattctatcggcgctgttgaattaagtatgatgaattgttgattgctg--ttatgtat 8383  T
Q  422 aattgcatttaaatagaatatacaagttgtt 452  Q
    | ||  ||||||||| | |||||||||||||    
T  8384 atttatatttaaataaattatacaagttgtt 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 1142 - 989
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||||| ||||||| || |  ||| ||||| | |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  1142 tgatttttaaattgttgttataagatgtaagttggttagttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 1043  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1042 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 6955 - 7128
Alignment:
Q  26 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 125  Q
    ||||||||| ||||||||| || |  ||| ||||||| ||||||||| |||| |  | | ||| ||||||||||  | || |||||| ||||||   |||    
T  6955 tgatttttagaatgttgttataaggtgtaagttggatagttttgagtacctggatgtttttagagaggactgggacaatttttagattaaaaagatgatt 7054  T
Q  126 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacg 199  Q
      ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |  |||  |||||||||||    
T  7055 acggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacctttttcttgctcgccacg 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 480
Target Start/End: Original strand, 1999 - 2089
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg-gattccattgtcaaaagttgttgtgtc 480  Q
    |||| ||| ||||||||| ||||| ||| |||||| || ||||||| | |||||||||||| | ||||| |||||| || |||||||||||    
T  1999 atgaatgaatgttgattgttgattgatgtataattacacttaaataaattatacaagttgtggagattcaattgtcgaaggttgttgtgtc 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 12987 - 12935
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12987 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 12935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 259230 - 259171
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  259230 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcatttttctgttcgcc 259171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 265645 - 265586
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  265645 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcatttttctgttcgcc 265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17791 - 17843
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  17791 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccaagagca 17843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 479 - 541
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||    
T  479 gggagcttaaaaatgaggatttagtgggaaaaatgtcaaaactcccgagagcacccattttct 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 8804 - 8750
Alignment:
Q  125 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  8804 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 8750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 18888 - 18834
Alignment:
Q  125 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18888 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 124544 - 124606
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 189  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  124544 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaacatttttct 124606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 35339 - 35285
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||    
T  35339 gggaacttaaaaatgaagatttagtgagaaaaatgttaaaactcccgagaacagc 35285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 468 - 520
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  468 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 965 - 913
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  965 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 3680 - 3732
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3680 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19057 - 19005
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19057 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 3770 - 3718
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  3770 gggagcttaaaaatgaggatttagtgagacaaatgtcaaaactcccgagagca 3718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 13036 - 13083
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  13036 cttaaaaatgaggttttagtgagaaaaatgtcaaaacttccgagagca 13083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 14162 - 14110
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14162 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 352 - 300
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  352 gggaggttaaaaatgaaaatttagtgagaaaaatgtcaaaactcccaagagca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 267 - 202
Alignment:
Q  221 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||  ||| | |||||||||||| |||||||| |||||||||| |||||||||| ||||    
T  267 gcgagtagccttttttcctgagctcgccattgcgagcagatgcactcgcgaggcgagttgcccagt 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 14077 - 14012
Alignment:
Q  221 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||  ||| | ||||||||||||||||||||| |||||||||| ||| |||||| ||||    
T  14077 gcgagtagccttttttcctgagctcgccatagcgagcagatgcactcgcgaggcaagttgcccagt 14012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 26439 - 26387
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26439 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 26387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2538 - 2590
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  2538 gggagcttaaaaatgaagatttagtgaggaaaatgtcacaactcccgagagca 2590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 46065 - 46013
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46065 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 22362 - 22414
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22362 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 22414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 26559 - 26611
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26559 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 22462 - 22506
Alignment:
Q  237 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  22462 cttgagcttgccatagcgagcagatgcactcgcgaggcgagttgc 22506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 26659 - 26703
Alignment:
Q  237 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  26659 cttgagcttgccatagcgagcagatgcactcgcgaggcgagttgc 26703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 61633 - 61685
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  61633 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 61685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 60070 - 60121
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  60070 ggagcttaaaaatgaagatttggtgagaaaaatgtcaaaactcccgagagca 60121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 61735 - 61777
Alignment:
Q  239 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 280  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  61735 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgc 61777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 3400 - 3452
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  3400 gggagcttaaaaatgaggatttagtgataaaaatgtcaaaactcccgagagca 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 1093 - 1041
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1093 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 11003 - 10952
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  11003 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactcccgagagca 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 968 - 1019
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  968 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 26147 - 26096
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26147 ggagcttaaaaatgatgatttagtgagaaaaatgtcaaaactcccgagagca 26096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 141882 - 141823
Alignment:
Q  137 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  141882 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 2691 - 2637
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 181  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  2691 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagc 2637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 5008 - 5058
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  5008 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 5108 - 5155
Alignment:
Q  239 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 285  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  5108 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 5155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 2581 - 2424
Alignment:
Q  21 aaccttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg 120  Q
    |||||||||||| ||| ||||||| || |   || ||||||| ||||| |||||||| |  | | ||| ||||||||| |||||| | |||| ||||||     
T  2581 aaccttgattttcaaattgttgttataaggtataagttggatagtttttagtgcctggatgtttttagagaggactggacaagtt-tcagattaaaaaga 2483  T
Q  121 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
      | | |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  2482 tgaatagggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 23555 - 23503
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||| ||||||||||||||||||    
T  23555 gggagcttaaaaatgaagttttagtgagaaaaatatcaaaactcccgagagca 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 55562 - 55612
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  55562 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 55612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 72518 - 72568
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  72518 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 72568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 46443 - 46499
Alignment:
Q  239 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagc 294  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||  |||||||    
T  46443 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagtacctgaagc 46499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 80713 - 80835
Alignment:
Q  57 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 156  Q
    |||| ||||||||||||||||||  | | ||| ||||||||||  | || | |||| ||||||   | | |||||||||||||||| | ||||| |||||    
T  80713 ttggttcgttttgagtgcctgaatgtttttagagaggactgggacaattttcagattaaaaagatgaatagggagcttaaaaatgaagctttagtgagaa 80812  T
Q  157 aaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||||||||||    
T  80813 aaatgtcaaaactcccgagagca 80835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 98090 - 98142
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  98090 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 98142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 161128 - 161180
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  161128 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaaatcccgagagca 161180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 71649 - 71580
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  71649 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 71580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 77279 - 77228
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||  |||||| ||||||| ||||||||||||||||||||||||||||    
T  77279 ggagcttcgaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 77228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 371 - 423
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  371 gggagcttaaaactgaagatttagtgagaaaaatgtcaaaactcccgagagca 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 5030 - 4978
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  5030 gggagcttaaaaatgatgttttagggagaaaaatgtcaaaactcccaagagca 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2965 - 3017
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2965 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 8846 - 8898
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  8846 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2930 - 2982
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2930 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11632 - 11684
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  11632 gggaacttaaaaatgaagatttcgtgagaaaaatgtcaaaactcctgagagca 11684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 5822 - 5770
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  5822 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 9328 - 9176
Alignment:
Q  27 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 126  Q
    |||||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | | | ||||||||||  | || |||||| ||||||   | |     
T  9328 gatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttggagaggactgggacaatttttagattaaaaagatgaata 9229  T
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  9228 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgatagca 9176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 27800 - 27748
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  27800 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 27748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 26857 - 26805
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  26857 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 26805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 21503 - 21351
Alignment:
Q  27 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 126  Q
    |||||||||| ||||||| || |  ||| ||||||| ||||||||||||||||    | ||| |||||||||   | || |||||| ||||||   | |     
T  21503 gatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctgaatgattttagagaggactggaacaatttttagattaaaaagatgaata 21404  T
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
     ||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  21403 tggagcttaaaaatgaagatttagtgagaaaaatgtcaaaattcccgagagca 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 32070 - 32018
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  32070 gggagcttgaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 32018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 7145 - 7099
Alignment:
Q  133 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||    
T  7145 ttaaaaatgaagatttagtgagataaatgtcaaaactcccgagagca 7099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19755 - 19807
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19755 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 1903 - 1851
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1903 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 7479 - 7427
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  7479 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 7427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 9790 - 9738
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9790 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 9738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 45461 - 45409
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  45461 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 45409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 9803 - 9751
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9803 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 9751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 47477 - 47529
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  47477 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 47529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 42490 - 42438
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  42490 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 42438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 30369 - 30317
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  30369 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 30317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 38963 - 38911
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  38963 gggaacttaaaaatgaagaattagtgagaaaaatgtcaaaactcccaagagca 38911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 45034 - 44982
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||||||||||||    
T  45034 gggaacttaaaaatgaagaattagtgagaaaaatgttaaaactcccgagagca 44982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 3434 - 3382
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3434 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2581 - 2633
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  2581 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 207348 - 207400
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  207348 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaacctcccgagagca 207400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 2872 - 2749
Alignment:
Q  56 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 155  Q
    ||||||| |||||||||||||||| || | ||| ||||||||||  | || |||||| ||||||   | | ||||||||||||||   | ||||| | ||    
T  2872 gttggatagttttgagtgcctgaatatttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatatagttttagtgtga 2773  T
Q  156 aaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||||||||||    
T  2772 aaaatgtcaaaactcccgagagca 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 548
Target Start/End: Complemental strand, 7137 - 6995
Alignment:
Q  405 attgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgta 504  Q
    |||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||| | || |||||||||||   ||||||||||||||| | |||    
T  7137 attgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgccgaaggttgttgtgtc-atagttgaccatgttgatgagta 7039  T
Q  505 agatatatttaaatatgcattgttgagtagtagttgttgatgtc 548  Q
    ||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  7038 agtcatattcatatatgcattattgtgtagcagttgttgttgtc 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 551
Target Start/End: Complemental strand, 1784 - 1725
Alignment:
Q  492 atgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 551  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||    
T  1784 atgttgaggtgtaagacatatttaaatatgcactgttgggtaatagttgttgttgtccat 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 152973 - 153020
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  152973 cttaaaaatgaggttttagtgagaaaaatgtcaaaactcccgagagca 153020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 20125 - 20177
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  20125 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 20177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 885 - 935
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  885 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 384 - 334
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  384 gagcttaaaagtgaagatttagtgagaaaaatgtcaaaactcccgagagca 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 476
Target Start/End: Original strand, 4558 - 4636
Alignment:
Q  398 attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttg 476  Q
    ||||||||||| ||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||| || |||||||    
T  4558 attgttgattgttgatttatgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttg 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 3752 - 3699
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 180  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  3752 gggaacttgaaaatgaggatttagtgagaaaaatgacaaaactcccgagagcag 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 7791 - 7738
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 180  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  7791 gggaacttgaaaatgaggatttagtgagaaaaatgacaaaactcccgagagcag 7738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 16496 - 16565
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    |||| ||||||||||| ||||||| |||| |||||||||||||||| ||||||||  ||||||| |||||    
T  16496 gggaacttaaaaatgaagatttagtgagagaaatgtcaaaactcccaagagcagcctttttctgttcgcc 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 143223 - 143174
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 176  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  143223 gggagcttaaaattgaagatttagtgagaaaaatgtcaaaactcccgaga 143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 62831 - 62883
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  62831 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 62883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 171435 - 171480
Alignment:
Q  134 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  171435 taaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 171480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 1938 - 1894
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcc 171  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  1938 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcc 1894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 6710 - 6658
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  6710 gggagcttaaaactgaagttttagtgagaaaaatgtcaaaactcccgagagca 6658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 9008 - 8956
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  9008 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 8956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 19655 - 19575
Alignment:
Q  400 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    ||||||||| ||||||||| |||||| || ||||||| | |||||||||||||| | | ||||||| || |||||||||||    
T  19655 tgttgattgttgatttatgtataattacacttaaataaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc 19575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 8893 - 8941
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 175  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  8893 gggagcttaaaaatgaagatttagtgaggaaaatgtcaaaactcccgag 8941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11950 - 12002
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  11950 gggagcctaaaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14106 - 14158
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14106 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 14158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 25994 - 25942
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||    
T  25994 gggagcttagaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 25942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 4678 - 4730
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  4678 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 46376 - 46428
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  46376 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 46428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 50649 - 50701
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  50649 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 50701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 36547 - 36481
Alignment:
Q  398 attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt 464  Q
    ||||||||||| ||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||    
T  36547 attgttgattgttgatttatgtataattacacttaaatatattatacaaattgttggatttcattgt 36481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 28402 - 28350
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  28402 gggaacttaaaaatgaggttttactgagaaaaatgtcaaaactcccgagagca 28350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17053 - 17105
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| |||||||||||||||||||  |||||||    
T  17053 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcttgagagca 17105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20732 - 20680
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  20732 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 20680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 56423 - 56371
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  56423 gggaacttaaaaatgaagatttagtgagaaaaaagtcaaaactcccgagagca 56371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 50579 - 50631
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  50579 gggagcttataattgatgatttagtgagaaaaatgtcaaaactcccgagagca 50631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 38284 - 38336
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  38284 gggaacttaaaaatgaagatttagtgagaagaatgtcaaaactcccgagagca 38336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 136344 - 136396
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  136344 gggaacttaaaaatgaagatttagtgagaagaatgtcaaaactcccgagagca 136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 43738 - 43785
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  43738 cttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 43785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 48804 - 48851
Alignment:
Q  132 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  48804 cttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 48851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 14192 - 14250
Alignment:
Q  138 aatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||  ||||||| |||||    
T  14192 aatgaggatttagtgagaaaaatatcaaaacttccgagagcagcctttttctgttcgcc 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 51316 - 51386
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtc-aaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| ||||||| |||||||||||| ||||||||||||||||||  ||||||| |||||    
T  51316 gggagcttagaattgaagatttagtgagaaaaatgtcaaaaactcccgagagcagcctttttctgttcgcc 51386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 1273 - 1386
Alignment:
Q  65 ttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtca 164  Q
    |||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||| | ||||||| ||||||||| |||    
T  1273 ttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaattaagatttagtgagaaaaatttca 1372  T
Q  165 aaactcccgagagc 178  Q
    ||||| ||||||||    
T  1373 aaacttccgagagc 1386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 548
Target Start/End: Complemental strand, 8949 - 8805
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg 502  Q
    |||||| |||||  || |||||| || ||||| | | |||||||||||||| | | ||||||| || |||||||||||   ||||||||||||||| | |    
T  8949 tgattgttgattgttgtataattacacttaaacaaattatacaagttgttgaaattcattgtcgaaggttgttgtgtcat-agttgaccatgttgatgag 8851  T
Q  503 taagatatatttaaatatgcattgttgagtagtagttgttgatgtc 548  Q
    ||||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  8850 taagtcatattcatatatgcattattgtgtagcagttgttgttgtc 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 391 - 480
Target Start/End: Original strand, 8223 - 8312
Alignment:
Q  391 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    |||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||| | |  |||||| || |||||||||||    
T  8223 atgactgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttgaaatttattgtcgaaggttgttgtgtc 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 9891 - 9842
Alignment:
Q  130 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  9891 agcttaaaaatgaagatttagtgagaaagatgtaaaaactcccgagagca 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 41274 - 41327
Alignment:
Q  127 gggagcttaaaaatgaggatttagggag-aaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||||||||||||||    
T  41274 gggagcttaaaaatgaagatttagtgagaaaaaaagtcaaaactcccgagagca 41327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 480
Target Start/End: Complemental strand, 2300 - 2223
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    |||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | |||||||||| |||||||||||    
T  2300 tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcaaaggttgttgtgtc 2223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 27383 - 27452
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||| ||||||||  ||||||| |||||    
T  27383 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccaagagcagcctttttctgttcgcc 27452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 882 - 830
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  882 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 5518 - 5570
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||| ||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  5518 gggagtttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 5570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 15122 - 15174
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| |||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  15122 gggaacttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 15174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 10920 - 10868
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| ||||||| |||||||||| |||||||||||||||||    
T  10920 gggagcttagaattgatgatttagtgagaaaaatgccaaaactcccgagagca 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 42551 - 42603
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||   |||||  |||||||||||||||||||||||||||    
T  42551 gggagcttaaaaatgaaattttagtaagaaaaatgtcaaaactcccgagagca 42603  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 53246 - 53298
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||||||||||   |||||  |||||||||||||||||||||||||||    
T  53246 gggagcttaaaaatgaaattttagtaagaaaaatgtcaaaactcccgagagca 53298  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 370937 - 370885
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||  ||||||||    
T  370937 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactttcgagagca 370885  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 24777 - 24726
Alignment:
Q  128 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  24777 ggagcttagaattgaggatctagtgagaaaaatgtcaaaattcccgagagca 24726  T

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Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 14575 - 14525
Alignment:
Q  129 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  14575 gagcttagaattgaggatctagtgagaaaaatgtcaaaattcccgagagca 14525  T

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Target: scaffold0402 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 15494 - 15456
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaa 165  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  15494 gggagcttaaaaatgaagatttagtgagaaaaatgtcaa 15456  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 1792 - 1873
Alignment:
Q  398 attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    ||||||||||| ||||||||| |||||  || ||||||| | ||||||| |||||||||| |||| || || |||||||||||    
T  1792 attgttgattgttgatttatgtataata-cacttaaataaattatacaaattgttggatttcattatcgaaggttgttgtgtc 1873  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 101300 - 101350
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 177  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||    
T  101300 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagag 101350  T

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Target: scaffold0947 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 3787 - 3828
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaac 168  Q
    |||| ||||||||||| ||||||| |||||||||||||||||    
T  3787 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaac 3828  T

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Target: scaffold0672 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 480
Target Start/End: Original strand, 8258 - 8335
Alignment:
Q  403 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 480  Q
    |||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | ||||||| || |||||||||||    
T  8258 tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcgaaggttgttgtgtc 8335  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 7809 - 7740
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 196  Q
    ||||||||| || ||  ||||||| ||| ||||| ||||||||||||||||||||  ||||||| |||||    
T  7809 gggagcttagaattgtagatttagtgaggaaaatatcaaaactcccgagagcagcctttttctgttcgcc 7740  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 1386 - 1438
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||| ||||||||||  ||||||||||| ||||    
T  1386 gggagcttaaaaatgaagttttagtgagaaaaatgataaaactcccgaaagca 1438  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 6397 - 6449
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    |||||||||||||||| | ||||  |||||||||||  |||||||||||||||    
T  6397 gggagcttaaaaatgaagttttaatgagaaaaatgtttaaactcccgagagca 6449  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 14956 - 14904
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  14956 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 14904  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 41755 - 41703
Alignment:
Q  127 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 179  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  41755 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 41703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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