View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8890_low_26 (Length: 473)
Name: NF8890_low_26
Description: NF8890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8890_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 440; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 3 - 462
Target Start/End: Complemental strand, 34187325 - 34186866
Alignment:
| Q |
3 |
aaatgcataactccattaatcaaaagtttgacaacacccttcccattgaccttaagagcataattatttcctaattttacctcatcacaaaaagaagcat |
102 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187325 |
aaatgcataactccattaatcaaaagtttgacaacacccttcccattgaccttaagagcataattatttcctaattttacctcatcacaaaaagaagcat |
34187226 |
T |
|
| Q |
103 |
caagtgaagaaaaccagtcctttctacctgtcatatggttgctacagcctgaatcgatgaaccacatgtcttgtgtatttgattctccatctgatgaaag |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187225 |
caagtgaagaaaaccagtcctttctacctgtcatatggttgctgcagcctgaatcgatgaaccacatgtcttgtgtatttgattctccatctgatgaaag |
34187126 |
T |
|
| Q |
203 |
ttgtgccatgagtagcactgcttcctcgttggtctcagcataatttgcggtgttgttcaggggtttatttgggcattcatactggaaatgtccaaactca |
302 |
Q |
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||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187125 |
ttgtgccatgagtagcattgcttcctcgttggtctcaacataatttgcggtgttgttcaggggtttatttgggcattcatactggaaatgtccaaactca |
34187026 |
T |
|
| Q |
303 |
tggcaataataacactccactgctgcctttcctcctctacctcctctgcctcttcctcgagtagctccacctcgaaagccacctcttccgcggctacggc |
402 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187025 |
tggcaataataacactccactgctgcctttcctcctctacctcctttgcctcttcctcgagtagctccacctcgaaagccacctcttccgcggctacggc |
34186926 |
T |
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| Q |
403 |
cagcacttgtctcatcttgagttactttcagcacttgctcttcgtgtgaatgatgtccat |
462 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
34186925 |
cagcacttgtctcatcttgagttactttcagcacttgctcttcgtgtgaattatgtccat |
34186866 |
T |
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