View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8890_low_59 (Length: 327)

Name: NF8890_low_59
Description: NF8890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8890_low_59
NF8890_low_59
[»] chr8 (29 HSPs)
chr8 (1-314)||(25849027-25849340)
chr8 (7-273)||(39695152-39695416)
chr8 (5-273)||(42266216-42266483)
chr8 (5-312)||(23418491-23418797)
chr8 (5-312)||(19699229-19699536)
chr8 (98-273)||(15635804-15635975)
chr8 (27-273)||(20454426-20454667)
chr8 (67-273)||(20455222-20455424)
chr8 (67-273)||(20460200-20460402)
chr8 (8-150)||(23947367-23947509)
chr8 (8-151)||(22584477-22584619)
chr8 (8-312)||(22244570-22244872)
chr8 (8-152)||(23888892-23889035)
chr8 (101-175)||(18302688-18302762)
chr8 (159-273)||(23409923-23410035)
chr8 (8-152)||(17217754-17217898)
chr8 (8-304)||(17907560-17907854)
chr8 (262-303)||(22252994-22253035)
chr8 (203-303)||(36727747-36727848)
chr8 (232-312)||(9548-9629)
chr8 (79-199)||(19882203-19882320)
chr8 (262-303)||(31723202-31723243)
chr8 (48-147)||(22318702-22318800)
chr8 (234-303)||(17217977-17218047)
chr8 (1-35)||(19929687-19929721)
chr8 (269-303)||(23900696-23900730)
chr8 (271-312)||(23947626-23947668)
chr8 (262-303)||(22318548-22318589)
chr8 (262-294)||(40492690-40492722)
[»] chr4 (29 HSPs)
chr4 (4-303)||(51992684-51992982)
chr4 (9-273)||(9871190-9871452)
chr4 (5-312)||(32466891-32467181)
chr4 (76-273)||(9638240-9638435)
chr4 (5-297)||(15612139-15612431)
chr4 (27-249)||(15448059-15448276)
chr4 (48-273)||(10704705-10704926)
chr4 (48-273)||(10918475-10918696)
chr4 (27-152)||(2584952-2585076)
chr4 (48-152)||(4615807-4615911)
chr4 (5-155)||(20723-20874)
chr4 (27-165)||(27027922-27028059)
chr4 (8-152)||(21061693-21061837)
chr4 (48-152)||(14933182-14933286)
chr4 (27-165)||(20899488-20899625)
chr4 (27-152)||(14942388-14942512)
chr4 (48-131)||(49547987-49548070)
chr4 (48-152)||(6511781-6511885)
chr4 (52-151)||(13446663-13446762)
chr4 (83-152)||(25090900-25090968)
chr4 (67-175)||(18229883-18229991)
chr4 (48-147)||(14629889-14629987)
chr4 (262-309)||(16043263-16043310)
chr4 (262-311)||(26050295-26050345)
chr4 (262-311)||(40907322-40907372)
chr4 (79-120)||(14630110-14630151)
chr4 (262-303)||(32306824-32306865)
chr4 (276-311)||(15365334-15365370)
chr4 (276-311)||(19738511-19738547)
[»] chr2 (19 HSPs)
chr2 (5-303)||(25045167-25045464)
chr2 (5-252)||(18388942-18389187)
chr2 (89-273)||(31520365-31520545)
chr2 (155-273)||(22501180-22501296)
chr2 (155-273)||(22509114-22509230)
chr2 (155-273)||(24883698-24883814)
chr2 (5-153)||(5985246-5985397)
chr2 (10-303)||(27860454-27860743)
chr2 (22-303)||(44071673-44071950)
chr2 (10-303)||(27851748-27852037)
chr2 (48-147)||(3538946-3539044)
chr2 (27-170)||(6478023-6478166)
chr2 (204-269)||(10039762-10039826)
chr2 (232-303)||(23287583-23287654)
chr2 (99-303)||(18390922-18391124)
chr2 (262-309)||(23005001-23005047)
chr2 (91-152)||(14693461-14693521)
chr2 (98-163)||(21368056-21368121)
chr2 (262-303)||(25141504-25141545)
[»] chr1 (29 HSPs)
chr1 (5-297)||(19761824-19762114)
chr1 (5-273)||(38057275-38057541)
chr1 (5-303)||(24726488-24726776)
chr1 (5-273)||(8276616-8276880)
chr1 (9-273)||(22349754-22350016)
chr1 (8-312)||(45754623-45754928)
chr1 (27-273)||(44822746-44822986)
chr1 (48-273)||(7792476-7792697)
chr1 (52-273)||(21180949-21181166)
chr1 (98-273)||(24815476-24815644)
chr1 (5-153)||(1642603-1642751)
chr1 (27-273)||(16400854-16401096)
chr1 (5-153)||(42696884-42697032)
chr1 (27-152)||(52983332-52983456)
chr1 (8-152)||(51476144-51476287)
chr1 (48-152)||(18275122-18275226)
chr1 (48-165)||(18823813-18823930)
chr1 (48-152)||(18270468-18270572)
chr1 (48-165)||(13528522-13528639)
chr1 (48-120)||(21240023-21240095)
chr1 (10-165)||(13301957-13302110)
chr1 (9-63)||(11809363-11809416)
chr1 (67-143)||(10813273-10813349)
chr1 (98-152)||(20587940-20587993)
chr1 (98-152)||(20592478-20592531)
chr1 (258-303)||(20346051-20346095)
chr1 (262-303)||(22124536-22124577)
chr1 (211-303)||(42697086-42697179)
chr1 (9-37)||(23073118-23073146)
[»] chr5 (17 HSPs)
chr5 (5-303)||(10953136-10953433)
chr5 (67-273)||(24277230-24277432)
chr5 (67-273)||(24384781-24384983)
chr5 (67-273)||(17812622-17812824)
chr5 (5-122)||(23200328-23200446)
chr5 (157-270)||(17875313-17875424)
chr5 (5-153)||(25250631-25250779)
chr5 (5-153)||(25314416-25314564)
chr5 (27-152)||(8952791-8952915)
chr5 (27-131)||(41876311-41876414)
chr5 (8-303)||(20469718-20470010)
chr5 (232-303)||(21618634-21618705)
chr5 (262-309)||(26740470-26740516)
chr5 (104-165)||(22357686-22357747)
chr5 (262-303)||(23470053-23470094)
chr5 (262-303)||(25250491-25250532)
chr5 (262-303)||(25314276-25314317)
[»] scaffold0065 (1 HSPs)
scaffold0065 (5-303)||(53228-53524)
[»] chr3 (35 HSPs)
chr3 (5-312)||(12512401-12512708)
chr3 (5-273)||(14642174-14642440)
chr3 (5-273)||(6158559-6158825)
chr3 (5-273)||(37037980-37038246)
chr3 (5-273)||(42324845-42325111)
chr3 (4-312)||(14250706-14251006)
chr3 (8-312)||(11886254-11886558)
chr3 (48-273)||(13523035-13523256)
chr3 (27-273)||(18367382-18367623)
chr3 (27-273)||(3394626-3394867)
chr3 (101-273)||(10562968-10563137)
chr3 (48-273)||(179331-179552)
chr3 (99-273)||(6819367-6819537)
chr3 (8-152)||(20417246-20417389)
chr3 (8-303)||(13179309-13179601)
chr3 (182-273)||(12275887-12275977)
chr3 (27-165)||(14818211-14818348)
chr3 (48-177)||(13520499-13520626)
chr3 (48-152)||(23395801-23395905)
chr3 (51-152)||(10550478-10550579)
chr3 (10-147)||(19569070-19569205)
chr3 (48-165)||(52213205-52213322)
chr3 (27-131)||(3803066-3803169)
chr3 (27-131)||(11850405-11850508)
chr3 (27-122)||(12275785-12275879)
chr3 (48-165)||(17548279-17548396)
chr3 (27-131)||(54520668-54520771)
chr3 (27-165)||(52338693-52338830)
chr3 (262-309)||(37427965-37428012)
chr3 (233-298)||(16059618-16059684)
chr3 (98-152)||(41173108-41173161)
chr3 (83-152)||(11258714-11258782)
chr3 (262-303)||(11563037-11563078)
chr3 (262-298)||(16050263-16050299)
chr3 (232-303)||(32402789-32402861)
[»] scaffold0321 (1 HSPs)
scaffold0321 (5-312)||(585-892)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-303)||(397658-397955)
scaffold0002 (8-303)||(127387-127679)
[»] scaffold0328 (1 HSPs)
scaffold0328 (5-273)||(19268-19534)
[»] chr7 (33 HSPs)
chr7 (5-312)||(36705251-36705558)
chr7 (5-273)||(17070917-17071177)
chr7 (22-273)||(47094259-47094508)
chr7 (71-273)||(59042-59242)
chr7 (27-273)||(8757020-8757261)
chr7 (97-273)||(13699513-13699686)
chr7 (27-270)||(40555370-40555608)
chr7 (5-135)||(10660019-10660149)
chr7 (48-273)||(832647-832868)
chr7 (48-273)||(1197827-1198048)
chr7 (127-297)||(10659564-10659731)
chr7 (27-273)||(4325243-4325484)
chr7 (27-273)||(12755330-12755571)
chr7 (65-273)||(13407996-13408200)
chr7 (65-273)||(13865010-13865214)
chr7 (8-152)||(11053798-11053941)
chr7 (1-201)||(17130437-17130635)
chr7 (8-297)||(15281429-15281715)
chr7 (5-153)||(33001124-33001272)
chr7 (48-152)||(3289563-3289667)
chr7 (65-175)||(21735220-21735330)
chr7 (27-199)||(14191786-14191954)
chr7 (190-303)||(4071069-4071184)
chr7 (262-303)||(16996472-16996513)
chr7 (79-120)||(19558098-19558139)
chr7 (27-143)||(11309470-11309585)
chr7 (48-147)||(15096432-15096530)
chr7 (98-152)||(11066730-11066783)
chr7 (262-311)||(13892842-13892892)
chr7 (262-303)||(130644-130685)
chr7 (235-303)||(13132960-13133029)
chr7 (27-199)||(14188992-14189160)
chr7 (79-147)||(15139360-15139427)
[»] scaffold0220 (3 HSPs)
scaffold0220 (5-273)||(15926-16192)
scaffold0220 (5-273)||(13108-13374)
scaffold0220 (8-292)||(17577-17860)
[»] scaffold0630 (1 HSPs)
scaffold0630 (5-273)||(8226-8492)
[»] chr6 (21 HSPs)
chr6 (5-248)||(19829601-19829839)
chr6 (5-312)||(24550864-24551168)
chr6 (67-273)||(18658432-18658634)
chr6 (27-273)||(610927-611168)
chr6 (27-273)||(29848129-29848370)
chr6 (7-147)||(22212254-22212394)
chr6 (8-152)||(31735664-31735808)
chr6 (27-165)||(13751082-13751219)
chr6 (27-151)||(24266952-24267075)
chr6 (48-165)||(19444010-19444127)
chr6 (27-131)||(5110525-5110628)
chr6 (27-122)||(24441112-24441206)
chr6 (48-165)||(16133400-16133517)
chr6 (27-131)||(5289884-5289987)
chr6 (51-178)||(13764560-13764685)
chr6 (262-303)||(20078003-20078044)
chr6 (262-298)||(31735521-31735557)
chr6 (262-311)||(25738630-25738680)
chr6 (262-303)||(22376506-22376547)
chr6 (276-311)||(15896200-15896236)
chr6 (3-35)||(18260026-18260058)
[»] scaffold0108 (2 HSPs)
scaffold0108 (9-273)||(5583-5845)
scaffold0108 (232-303)||(3396-3468)
[»] scaffold0007 (1 HSPs)
scaffold0007 (27-273)||(159574-159817)
[»] scaffold0149 (1 HSPs)
scaffold0149 (7-273)||(20815-21069)
[»] scaffold0589 (1 HSPs)
scaffold0589 (8-312)||(3435-3741)
[»] scaffold0308 (1 HSPs)
scaffold0308 (67-252)||(12558-12741)
[»] scaffold0126 (1 HSPs)
scaffold0126 (48-273)||(6006-6227)
[»] scaffold0116 (2 HSPs)
scaffold0116 (122-273)||(36195-36344)
scaffold0116 (6-87)||(36346-36427)
[»] scaffold0070 (1 HSPs)
scaffold0070 (48-273)||(8264-8485)
[»] scaffold0607 (1 HSPs)
scaffold0607 (27-273)||(2893-3134)
[»] scaffold0825 (1 HSPs)
scaffold0825 (79-273)||(1439-1629)
[»] scaffold0042 (2 HSPs)
scaffold0042 (48-273)||(51165-51386)
scaffold0042 (8-153)||(28446-28590)
[»] scaffold0077 (1 HSPs)
scaffold0077 (184-312)||(3055-3183)
[»] scaffold0056 (1 HSPs)
scaffold0056 (10-303)||(66181-66470)
[»] scaffold0445 (1 HSPs)
scaffold0445 (8-303)||(2524-2818)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-303)||(109325-109624)
scaffold0004 (48-152)||(59550-59654)
[»] scaffold0273 (1 HSPs)
scaffold0273 (27-152)||(6807-6931)
[»] scaffold0188 (1 HSPs)
scaffold0188 (27-151)||(379-502)
[»] scaffold0429 (1 HSPs)
scaffold0429 (48-165)||(2718-2835)
[»] scaffold0117 (1 HSPs)
scaffold0117 (27-152)||(40966-41090)
[»] scaffold0083 (3 HSPs)
scaffold0083 (5-153)||(676-824)
scaffold0083 (5-153)||(5980-6128)
scaffold0083 (9-74)||(11526-11591)
[»] scaffold0490 (1 HSPs)
scaffold0490 (48-152)||(5031-5135)
[»] scaffold0309 (2 HSPs)
scaffold0309 (48-152)||(6113-6217)
scaffold0309 (48-152)||(8265-8369)
[»] scaffold0010 (1 HSPs)
scaffold0010 (8-303)||(127010-127302)
[»] scaffold0001 (2 HSPs)
scaffold0001 (190-273)||(77033-77115)
scaffold0001 (264-311)||(162921-162969)
[»] scaffold2046 (1 HSPs)
scaffold2046 (27-165)||(297-434)
[»] scaffold0075 (1 HSPs)
scaffold0075 (5-155)||(60422-60573)
[»] scaffold0453 (1 HSPs)
scaffold0453 (48-152)||(3242-3346)
[»] scaffold0962 (1 HSPs)
scaffold0962 (27-150)||(1272-1394)
[»] scaffold0409 (2 HSPs)
scaffold0409 (8-303)||(394-686)
scaffold0409 (8-303)||(8649-8941)
[»] scaffold0151 (1 HSPs)
scaffold0151 (262-311)||(30436-30486)
[»] scaffold0338 (1 HSPs)
scaffold0338 (27-199)||(3642-3810)
[»] scaffold0326 (1 HSPs)
scaffold0326 (27-131)||(134-237)
[»] scaffold0181 (1 HSPs)
scaffold0181 (68-152)||(34132-34216)
[»] scaffold0008 (3 HSPs)
scaffold0008 (27-178)||(12227-12375)
scaffold0008 (262-303)||(136210-136251)
scaffold0008 (22-147)||(136364-136487)
[»] scaffold0413 (1 HSPs)
scaffold0413 (48-122)||(10883-10957)
[»] scaffold0107 (1 HSPs)
scaffold0107 (27-152)||(3065-3189)
[»] scaffold0003 (2 HSPs)
scaffold0003 (98-143)||(95542-95587)
scaffold0003 (273-312)||(95715-95755)
[»] scaffold0123 (1 HSPs)
scaffold0123 (79-175)||(1996-2092)
[»] scaffold0716 (1 HSPs)
scaffold0716 (262-311)||(1298-1347)
[»] scaffold0635 (1 HSPs)
scaffold0635 (204-269)||(7244-7308)
[»] scaffold0074 (1 HSPs)
scaffold0074 (262-303)||(8431-8472)
[»] scaffold1186 (2 HSPs)
scaffold1186 (48-147)||(774-872)
scaffold1186 (79-120)||(995-1036)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-32)||(56857-56888)
[»] scaffold0005 (2 HSPs)
scaffold0005 (48-147)||(187396-187494)
scaffold0005 (79-120)||(187232-187273)
[»] scaffold1662 (1 HSPs)
scaffold1662 (98-152)||(158-211)
[»] scaffold0375 (1 HSPs)
scaffold0375 (98-152)||(9040-9093)
[»] scaffold0485 (1 HSPs)
scaffold0485 (262-303)||(10402-10443)
[»] scaffold0293 (1 HSPs)
scaffold0293 (262-303)||(17753-17794)
[»] scaffold0260 (1 HSPs)
scaffold0260 (258-303)||(8374-8418)
[»] scaffold0251 (1 HSPs)
scaffold0251 (262-303)||(20617-20658)
[»] scaffold0028 (1 HSPs)
scaffold0028 (262-303)||(3681-3722)
[»] scaffold1695 (1 HSPs)
scaffold1695 (79-147)||(600-667)
[»] scaffold1551 (1 HSPs)
scaffold1551 (276-311)||(106-142)
[»] scaffold0628 (2 HSPs)
scaffold0628 (273-312)||(4112-4152)
scaffold0628 (273-312)||(8672-8712)
[»] scaffold0379 (1 HSPs)
scaffold0379 (276-311)||(14432-14468)
[»] scaffold0106 (1 HSPs)
scaffold0106 (258-294)||(19484-19520)


Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 25849340 - 25849027
Alignment:
Q  1 caacttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  25849340 caacttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaactgcagagatggcaacataaccatcttgcaacacagcaacatcaat 25849241  T
Q  101 aataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25849240 aataacaacttgaatgatataaacaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatt 25849141  T
Q  201 tgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25849140 tgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaaaattaactcacaacatcacgtgcgacaaagatcgcaagaaccc 25849041  T
Q  301 taacaaggttgatg 314  Q
    ||||||||||||||    
T  25849040 taacaaggttgatg 25849027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 39695416 - 39695152
Alignment:
Q  7 acaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | | |||||||| |||||||||||| | ||||||||||||||||    
T  39695416 acaacttagaccaacacttgcaacttgatgacaataatggttcaacaacagcagaaacaacaacataaacatcttgcaacatagcaacatcaataataac 39695317  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39695316 aacttgaatgatataaacaataataatttttatatcatacattttcaacaccttatataaatatcttaaac-tagccaacaatcattaatcatttgattc 39695218  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    || |||||| ||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  39695217 agtctctctataagtctataacttaat-aacaacttccattcctatcccaagatcaactcacaacat 39695152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 42266483 - 42266216
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | ||||||||  |||||||||||| | ||||||| |||||    
T  42266483 ttacaacttagaccaacacttgcaacttaatgacaataatggttcaacaacagcagaaacaacaacataaaacatcttgcaacatagcaacatcgataat 42266384  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttga 203  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||| |||||||||||    
T  42266383 aacaacttgaatgatataaacaataatgatttccatatcatacattttcaacacattatataaatatctcaaac-taaccaacaatcagtaatcatttga 42266285  T
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    || | ||||||||||||| |||||||| || |||||||||||||||||||  ||||||||||| ||||||    
T  42266284 tttatgctctctgtaagtttataactt-attaacaacttccattcctatcccaagattaactctcaacat 42266216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 5 - 312
Target Start/End: Original strand, 23418491 - 23418797
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||||||||||| ||||||||  |||| |    
T  23418491 ttacaacgtagaccaccacttgcaacttaatgacaataatgattcaacaacagtagagacaacaacataaacatcttgcaacataacaacattgataaca 23418590  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    ||   ||||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||||||||| |||  ||||| ||||||||||||||||    
T  23418591 acggtttgaatgatataaacaataataatttccatatcatatgttttcaacacgttatataaatatcttaaa-ttaatcaacaatcattaatcatttgat 23418689  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    ||||||||||||||||||||  ||||||| |||||| |||| |||||||  | ||| ||||| ||||||||  |||||||| ||||||||||||||| ||    
T  23418690 tcaggctctctgtaagtctaggacttaat-aacaacctccactcctatcccatgatcaactctcaacatcatatgcgacaaggatcgcaagaaccctaaa 23418788  T
Q  304 caaggttga 312  Q
    |||||||||    
T  23418789 caaggttga 23418797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 5 - 312
Target Start/End: Original strand, 19699229 - 19699536
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataat 103  Q
    |||||||||||||||||||||||||   ||||| | || | | |||| ||||||||||| | ||||||||  || ||| || || | | |||| |||| |    
T  19699229 ttacaacttagaccaacacttgcaatcaaatgatattattaaatcaataacagcagagacaacaacataaagcaacttacatcatagccacattaatact 19699328  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttga 203  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||   || |||||| |||||||||||||||    
T  19699329 aacaacttggataatataaacaataacaatttccatatcatacattttcaacacaatatataaatatctcaac--taaccaacaatcattaatcatttga 19699426  T
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-a 302  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  19699427 ttcatgctctctgtaaatctataacttaataaacaacttccattcctatcctaagatcaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 19699526  T
Q  303 acaaggttga 312  Q
    ||||||||||    
T  19699527 acaaggttga 19699536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 273
Target Start/End: Complemental strand, 15635975 - 15635804
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatc 197  Q
    ||||||||||||||||||||||||| |||  ||| |||| |||||| ||||||||  | ||| |||||||||||||||||| | | |||| |||||||||    
T  15635975 aataataacaacttgaatgatataaacaacgatattttctatatcacacattttc--ctcataatataaatatcttaaactaa-ctaacaatcattaatc 15635879  T
Q  198 atttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||  ||||| ||||||||||||    
T  15635878 atttgattcaggctctctgtaagcctataactt-attaacaacttccattcctatcccaagatcaactcacaacat 15635804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 20454426 - 20454667
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  20454426 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 20454524  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||| |||||| |  | ||| ||||||||||||||||| || | |||| |||||||||||||||||||| |||| ||||||||||||    
T  20454525 cgatattttctatatcacacatttcc--ctcataatataaatatcttaaac-taactaacaatcattaatcatttgattcagactctttgtaagtctata 20454621  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || ||||| || ||||||||||  ||||| ||||||||||||    
T  20454622 actt-attaacaaattacattcctatcccaagatcaactcacaacat 20454667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 20455222 - 20455424
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||| |||||| || || |  ||||||    
T  20455222 caacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccatcata--atataa 20455319  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactc 266  Q
    |||||||||||| | | || | ||||||||||||||||||||||||| |||||||||||||||| || |||||||| ||||||||||  ||||| |||||    
T  20455320 atatcttaaactaa-ctaataatcattaatcatttgattcaggctctttgtaagtctataactt-attaacaacttacattcctatcccaagatcaactc 20455417  T
Q  267 acaacat 273  Q
    |||||||    
T  20455418 acaacat 20455424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 20460200 - 20460402
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||| |||||| || || |  ||||||    
T  20460200 caacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccatcata--atataa 20460297  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactc 266  Q
    |||||||||||| | | || | ||||||||||||||||||||||||| |||||||||||||||| || |||||||| ||||||||||  ||||| |||||    
T  20460298 atatcttaaactaa-ctaataatcattaatcatttgattcaggctctttgtaagtctataactt-attaacaacttacattcctatcccaagatcaactc 20460395  T
Q  267 acaacat 273  Q
    |||||||    
T  20460396 acaacat 20460402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 23947367 - 23947509
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||||||||||| | |||| || ||| ||||||||||| ||||||||||  || ||||||||| | |||||| |||||||||    
T  23947367 caacttagaccaacacttgcaacttaatgatattaataat-caataacagcagagacagcaacataaaacaacttgcaacatagcaacattaataataac 23947465  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattt 150  Q
    |||||||||||||||| |||||||| |||| |||||||||||||    
T  23947466 aacttgaatgatataaacaataatattttctatatcatacattt 23947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 22584619 - 22584477
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataaca 107  Q
    |||||||||| ||||||||||||||||||| | |||| || ||||||||||||||| |||||||||| || ||||||||| | |||||| |||||||||     
T  22584619 caacttagactaacacttgcaacttaatgatattaataat-caacaacagcagagacagcaacataaacaacttgcaacatagcaacattaataataacc 22584521  T
Q  108 acttgaatgatataagcaataataatttccatatcatacatttt 151  Q
    ||||||||||||||| |||  ||| |||| ||||||||||||||    
T  22584520 acttgaatgatataaacaacgatattttcaatatcatacatttt 22584477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 312
Target Start/End: Original strand, 22244570 - 22244872
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||| ||||||| | |||| || ||| ||||||||||| | ||||||||  || ||||||||| |  ||||| |||||||||    
T  22244570 caacttagaccaacacttgcaatttaatgatattaataat-caataacagcagagacatcaacataaaacaacttgcaacatagaaacattaataataac 22244668  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca-tttgatt 205  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||||  |||| |||||  || |||||  ||| ||||||  ||||||||| ||| |||    
T  22244669 aacttgaaagatataaacaataatattttctatatcatacattttca--acataatatatgtagcttaa--ttaaccaaca-acattaatcattttaatt 22244763  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattccta-tcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    ||| ||| ||| |   | |||   | ||||||||||| ||||||||  |  ||||  |||||| ||||||||||||||||||||||||||||||||| ||    
T  22244764 cagactcactgaaccacaatataattataaacaactttcattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaaccctaaa 22244863  T
Q  304 caaggttga 312  Q
    |||||||||    
T  22244864 caaggttga 22244872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 23888892 - 23889035
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataaca 107  Q
    |||||||||||||||||||||||||||||| | |||| || ||||||||  ||||| |||||||||| || ||||||||||| | |||| ||||||||||    
T  23888892 caacttagaccaacacttgcaacttaatgatattaataat-caacaacaatagagacagcaacataaacaacttgcaacacagctacattaataataaca 23888990  T
Q  108 acttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||| ||||||| ||| ||||  ||| |||||||||||||||    
T  23888991 acttgaacgatataaacaacaatatcttctatatcatacattttc 23889035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 18302762 - 18302688
Alignment:
Q  101 aataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaa 175  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18302762 aataacaacttgaatgatataaacaataataatttatatatcatacattttcaacacattatataaatatcttaa 18302688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 23409923 - 23410035
Alignment:
Q  159 ttatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaag 258  Q
    |||||||||||||||||||| | |||||| |||||||| |||| ||||||||||||||||| ||||||||||||| |||||||| |||| |||||  |||    
T  23409923 ttatataaatatcttaaactaa-ccaacaatcattaattatttaattcaggctctctgtaaatctataacttaat-aacaactttcatttctatcccaag 23410020  T
Q  259 attaactcacaacat 273  Q
    || ||||||||||||    
T  23410021 atcaactcacaacat 23410035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 17217754 - 17217898
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataataac 106  Q
    ||||||||||| | |||||||||||||||| | |||| |||||||||||||||||| |||||||| || || ||||||||| | |||||| |||||||||    
T  17217754 caacttagaccgatacttgcaacttaatgatattaataattcaacaacagcagagacagcaacataaaacaacttgcaacatagcaacattaataataac 17217853  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    |||||  ||||||||| ||| | || |||| |||||||||| ||||    
T  17217854 aacttagatgatataa-caacattattttctatatcatacactttc 17217898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 304
Target Start/End: Complemental strand, 17907854 - 17907560
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||| |||| |||||||||||||| |  ||| || ||||||||||||||| | ||||||||  || ||||||||| | |||||| ||||||| |    
T  17907854 caacttagactaacatttgcaacttaatgatatcaataat-caacaacagcagagacaacaacataaaacaacttgcaacatagcaacattaataatatc 17907756  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca-tttgatt 205  Q
    |||||||||||||| | ||| |||| |||| ||||||||| |||||  ||||| |||||  ||| || |  ||| ||||||  ||||||||| ||| |||    
T  17907755 aacttgaatgatatgaacaacaatattttctatatcatactttttc--cacataatatatgtat-ttcacattaaccaaca-acattaatcattttaatt 17907660  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattccta-tcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaac 304  Q
     ||  || ||| ||| ||||| ||| |||||||||||||||| |||  |  ||||  |||||| ||||||| ||| |||||||||||||||||| |||||    
T  17907659 tagattcactgaaaggctatacctttataaacaacttccatttctaccccaaagaccaactcataacatcaggtgtgacaaagatcgcaagaactctaac 17907560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 22253035 - 22252994
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  22253035 aactcataacatcacgtgcgacaaagatcgcaagaaccctaa 22252994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 36727848 - 36727747
Alignment:
Q  203 attcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccct 301  Q
    |||||| ||| ||| ||| |||||  || |||||||||||||||||||| |  || ||  |||||| |||||||||||||||||||||||||||||| ||    
T  36727848 attcagactcactgaaagactatacatttataaacaacttccattcctaccccaaagacaaactcataacatcacgtgcgacaaagatcgcaagaacact 36727749  T
Q  302 aa 303  Q
    ||    
T  36727748 aa 36727747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 9548 - 9629
Alignment:
Q  232 ataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttga 312  Q
    ||||||||||| |||||||| | ||| || ||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||    
T  9548 ataaacaactttcattcctaccctaacgactaactcagaacatcatgtgcgacaa-gatcgcaagaaccctaaacaaggttga 9629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 19882203 - 19882320
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaact 178  Q
    ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||| | |||| |  | ||| |||||||||||||||||     
T  19882203 cttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacagatttcc--ctcataatataaatatcttaaac- 19882299  T
Q  179 tagccaacactcattaatcat 199  Q
    || | |||| |||||||||||    
T  19882300 taactaacaatcattaatcat 19882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 31723243 - 31723202
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  31723243 aactcagaacatcacgtgcgacaaagatcgcaagaacactaa 31723202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 22318800 - 22318702
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || |||||||  | || ||||||||| |||||||| || || ||||||||||||||||| | ||| ||| ||||| ||||||||||    
T  22318800 tcaacaacagcaatgacagcaacaatatcaacttgcaacataacaacattaacaacaacaacttgaatgatatgaacaacaat-atttctatatcataca 22318702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 17217977 - 17218047
Alignment:
Q  234 aaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||||||||||| |  || ||  |||||| |||||||||||||| |||||||| |||||||||||    
T  17217977 aaacaacttccattcctacccgaaagaccaactcataacatcacgtgcgataaagatcgaaagaaccctaa 17218047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 19929721 - 19929687
Alignment:
Q  1 caacttacaacttagaccaacacttgcaacttaat 35  Q
    ||||||||||||| |||||||||||||||||||||    
T  19929721 caacttacaacttggaccaacacttgcaacttaat 19929687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 303
Target Start/End: Complemental strand, 23900730 - 23900696
Alignment:
Q  269 aacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||||||||||||||||||||||| ||||    
T  23900730 aacatcacgtgcgacaaagatcgcaagaacactaa 23900696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 23947626 - 23947668
Alignment:
Q  271 catcacgtgcgacaaagatcgcaagaaccct-aacaaggttga 312  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  23947626 catcacgtgcgacaaagatcccaagaaccctaaacaaggttga 23947668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 22318589 - 22318548
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||||||||||||||||||| ||||    
T  22318589 aactcagaacgtcacgtgcgacaaagatcgcaagaacactaa 22318548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 40492722 - 40492690
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaa 294  Q
    ||||||||||||| |||||||||||||||||||    
T  40492722 aactcacaacatctcgtgcgacaaagatcgcaa 40492690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 303
Target Start/End: Original strand, 51992684 - 51992982
Alignment:
Q  4 cttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||| |||    
T  51992684 cttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagacagcaacataaacatcttgcaacatagcaacatcaacaat 51992783  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttga 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |  ||||| | |||| ||||||||    
T  51992784 aacaacttgaatgatataaacaataataatttccatatcatacattttcaacacattatacaaatatcttaaac-aattcaacaattattagtcatttga 51992882  T
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  51992883 ttcaggctctctgtaagtctataacttaataaacaacttccattcctaacccaagatcaactcacaacatcacgtgcgacaaagatcacaagaaccctaa 51992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 9 - 273
Target Start/End: Complemental strand, 9871452 - 9871190
Alignment:
Q  9 aacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaa 108  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||| | | |||||||| |||||||||||| |  |||||||||||||||||    
T  9871452 aacttagaccaacacttgtaacttaatgacaataatggttcaacaacagcagaaacaacaacataaacatcttgcaacatagaaacatcaataataacaa 9871353  T
Q  109 cttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcag 208  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  9871352 cttgactgatataaacaataataatttctatatcatacattttcaacacattatataaatatcttaaac-taaccaacaatcattaatcatttgattcag 9871254  T
Q  209 gctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  9871253 gctctctgtaagtctataacttaat-aacaacttccattcctatcccaagataaactcacaacat 9871190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 5 - 312
Target Start/End: Complemental strand, 32467181 - 32466891
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |                |||||  |||| |    
T  32467181 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagacaacaacatagc----------------aacattgataaca 32467098  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    ||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||  ||||| ||||||||||||||||    
T  32467097 acagcttgaatgatataaacaataatattttccatatcatacgttttcaacacattatataaatatcttaaa-ttaatcaacaatcattaatcatttgat 32466999  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaacccta-a 303  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||  | ||| ||||| |||||||||||||||||||||| |||||||||||| |    
T  32466998 tcaggctctctgtaagtctataacttaat-aacaacctccactcctatcccaggatcaactctcaacatcacgtgcgacaaagatagcaagaaccctaca 32466900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 76 - 273
Target Start/End: Original strand, 9638240 - 9638435
Alignment:
Q  76 catcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaa 175  Q
    |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  9638240 catcttgcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaa 9638339  T
Q  176 acttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    || || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  9638340 ac-taaccaacaatcattaatcatttgattcaggctctctgtaagtctataacttaat-aacaacttccattcctatcccaagatcaactcacaacat 9638435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 5 - 297
Target Start/End: Original strand, 15612139 - 15612431
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||| ||||||||||||||||| | ||||| | |||| | |||| |||| |||||| |||| ||| | || ||| ||||||||| |||| |||| ||    
T  15612139 ttacaacctagaccaacacttgcaattaaatgatattaataaatcaataacaccagagacagcagcatcagcaacttacaacacaaccacattaatacta 15612238  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca-tttga 203  Q
     ||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| |||| || |||||| ||| |||||| |||||    
T  15612239 gcaacttggatgatataaacaataacaatttccatatcatacattttcaacacaatatataaatatctcaaac-taaccaacaatcaataatcattttga 15612337  T
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaa 297  Q
    |||||||||||||||| ||| | ||||||||||||||||| |||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  15612338 ttcaggctctctgtaaatctgtgacttaataaacaacttcaattcctatcccaagatcaactcataacatcacgtgcgacaaagatcgcaagaa 15612431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 249
Target Start/End: Complemental strand, 15448276 - 15448059
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || || |||||||||||| | |||||||| || ||||||||| |  || || |||||||| |||||||||||||||| |||    
T  15448276 caacttaatgatattaataat-cagcaacagcagagacaacaacataagcaacttgcaacatagaaatattaataataaaaacttgaatgatataaacaa 15448178  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  ||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  15448177 cgatattttctatatcatacattttc--cacataatataaatatcttaaactaa-ccaacaatcattaatcatttgattcaggctctctgtaagtctata 15448081  T
Q  227 acttaataaacaacttccattcc 249  Q
    |||| ||  ||||||||||||||    
T  15448080 actt-atttacaacttccattcc 15448059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 273
Target Start/End: Original strand, 10704705 - 10704926
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || | ||||| || || ||||||||| ||||| || |||||||||||||||||| |||||| |||  ||| |||  ||| ||||||    
T  10704705 tcaacaacagcatggacaacaacaaaagcaacttgcaacataacaatattaataataacaacttgaattatataaacaacgatattttttataccataca 10704804  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    ||||   | ||| |||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  10704805 ttttg--ctcataatataaatatcttaaactaa-ccaacaatcattaatcatttgattccggctctctgtaagtctataactt-attaacaacttccatt 10704900  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  10704901 cctatcccaagatcaactcacaacat 10704926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 273
Target Start/End: Original strand, 10918475 - 10918696
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || | ||||| || || ||||||||| ||||| || |||||||||||||||||| |||||| |||  ||| |||  ||| ||||||    
T  10918475 tcaacaacagcatggacaacaacaaaagcaacttgcaacataacaatattaataataacaacttgaattatataaacaacgatattttttataccataca 10918574  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    ||||   | ||| |||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  10918575 ttttg--ctcataatataaatatcttaaactaa-ccaacaatcattaatcatttgattccggctctctgtaagtctataactt-attaacaacttccatt 10918670  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  10918671 cctatcccaagatcaactcacaacat 10918696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 2585076 - 2584952
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| |||||| | ||||||||||||| ||||||||||| |||    
T  2585076 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacataacaacgttaataataacaactcgaatgatataaacaa 2584978  T
Q  127 taataatttccatatcatacattttc 152  Q
     |||| |||| |||||||||||||||    
T  2584977 caatattttctatatcatacattttc 2584952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 4615911 - 4615807
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||| |||||||| |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| ||||||||||    
T  4615911 tcaacaaaagcagagacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcataca 4615812  T
Q  148 ttttc 152  Q
    |||||    
T  4615811 ttttc 4615807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 20723 - 20874
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||| | ||||| | || | | |||| ||||||||||| ||||||||||  || ||| || || | | | || |||| |    
T  20723 ttacaacttagaccaacacttgcaattaaatgatattattaaatcaataacagcagagacagcaacataaagcaacttacatcatagccagattaatact 20822  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaac 155  Q
    ||||||||| ||||||||| || ||| |||||||||||||||||||||||||    
T  20823 aacaacttggatgatataaacactaacaatttccatatcatacattttcaac 20874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 27027922 - 27028059
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||| | | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  27027922 caacttaatgatattaataat-caacaacagcagaaacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 27028020  T
Q  127 taataatttccatatcatacattttcaacacattatata 165  Q
      ||| |||| ||||||||||||||| ||| | ||||||    
T  27028021 cgatactttctatatcatacattttccacataatatata 27028059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 21061693 - 21061837
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    ||||||||||||||||||||||||||| || | |||| || ||| ||||| ||||| | ||||||||  || ||||||||| | |||||| ||||| |||    
T  21061693 caacttagaccaacacttgcaacttaacgatattaataat-caataacagtagagacaacaacataaaacaacttgcaacatagcaacattaataacaac 21061791  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    |||||||||||||||| ||  |||| |||| |||||| ||||||||    
T  21061792 aacttgaatgatataaacatcaatattttctatatcaaacattttc 21061837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 14933286 - 14933182
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||| | |||||||||| || ||||||||| | ||| || ||||||||||||||||||||| ||| |||  ||| |||| ||||||||||    
T  14933286 tcaacaacagcagaaacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctatatcataca 14933187  T
Q  148 ttttc 152  Q
    |||||    
T  14933186 ttttc 14933182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 20899625 - 20899488
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||| ||||| | |||||||| || ||||||||| ||||| || ||||| ||||||||||||||||||| |||    
T  20899625 caacttaatgatattaataat-caacaacagtagagacaacaacataagcaacttgcaacataacaatattaataacaacaacttgaatgatataaacaa 20899527  T
Q  127 taataatttccatatcatacattttcaacacattatata 165  Q
      | | |||| ||||||||||||||| ||| | ||||||    
T  20899526 cgacattttctatatcatacattttccacataatatata 20899488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 14942512 - 14942388
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||| | | |||||||| || ||||||||| | ||| || ||||||||||||||||||||| ||| |||    
T  14942512 caacttaatgatattaataat-caacaacagcagaaacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatgtaaacaa 14942414  T
Q  127 taataatttccatatcatacattttc 152  Q
      ||| |||| | |||||||||||||    
T  14942413 cgatattttctagatcatacattttc 14942388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 49548070 - 49547987
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataata 131  Q
    ||||||||| |||||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| ||| ||||    
T  49548070 tcaacaacaacagagacagcaacataaacaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaagaata 49547987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 6511781 - 6511885
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||| |||||  | |||||||| || |||| || | | |||| | ||||||||||||| ||||||||||| ||| |||| |||| ||||||||||    
T  6511781 tcaacaacaacagaggcaacaacataaacaacttgaaatatagcaacgttaataataacaactcgaatgatataaacaacaatattttctatatcataca 6511880  T
Q  148 ttttc 152  Q
    |||||    
T  6511881 ttttc 6511885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 13446663 - 13446762
Alignment:
Q  52 caacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacatttt 151  Q
    ||||| |||||| | |||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||  ||| |||| || |||||||||||    
T  13446663 caacaacagagacaacaacataagcaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaacgatattttctatctcatacatttt 13446762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 25090900 - 25090968
Alignment:
Q  83 caacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||| |||| ||| ||||||||||||||||||||||||| ||| | || |||| |||||||||||||||    
T  25090900 caacataacatcattaataataacaacttgaatgatataa-caacattattttctatatcatacattttc 25090968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 18229883 - 18229991
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| || ||||||||| | ||| || |||| |||||||||||||||||  | |||  ||| |||| || |||||||||||| ||| ||| |||||    
T  18229883 caacataaacaacttgcaacatagcaatattaatattaacaacttgaatgataataacaacgatattttctatctcatacattttccacatattttataa 18229982  T
Q  167 atatcttaa 175  Q
    ||| |||||    
T  18229983 atagcttaa 18229991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 14629889 - 14629987
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || |||||||  | || |||||| || |||||||| || |  ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  14629889 tcaacaacagcaatgacagcaacaataacaacttgcatcataacaacattaacaggaacaacttgaatgatataaacaataat-atttctatatcataca 14629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 16043263 - 16043310
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaacaaggt 309  Q
    ||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  16043263 aactcaccacaactcgtgcgacaaagatcgcatgaaccctaacaaggt 16043310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 26050345 - 26050295
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||| ||| ||| ||||||||||||||||||||||||| ||||||||||    
T  26050345 aactcaaaacctcatgtgcgacaaagatcgcaagaaccctaaacaaggttg 26050295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 40907322 - 40907372
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||| |||||| ||||||||||||||| |||||||||| ||||||||||    
T  40907322 aactcataacatctcgtgcgacaaagatcacaagaaccctaaacaaggttg 40907372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 14630110 - 14630151
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatat 120  Q
    ||||||||| ||||||||||| || |||||||||||||||||    
T  14630110 cttgcaacataacaacatcaacaacaacaacttgaatgatat 14630151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 32306865 - 32306824
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||| ||||||||||| ||||||||||||||||    
T  32306865 aactcataacatctcgtgcgacaaaaatcgcaagaaccctaa 32306824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 15365334 - 15365370
Alignment:
Q  276 cgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15365334 cgtgcgacaaagatcgcaagaaccctaaacaaggttg 15365370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 19738511 - 19738547
Alignment:
Q  276 cgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19738511 cgtgcgacaaagatcgcaagaaccctaaacaaggttg 19738547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 5 - 303
Target Start/End: Original strand, 25045167 - 25045464
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||| | |||||||||||| |    
T  25045167 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagaaacagcaacataaacgtcttgcaacatagcaacatcaataaca 25045266  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||  | |||||| ||||||||||||||||    
T  25045267 acaacttgaatgatataaacaataataatttccatatcttacattttcaacacattatataaataacttaaac-caaccaacaatcattaatcatttgat 25045365  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||| |  ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25045366 tcaggctttctgtacgtctataacttaataaacaacttacattcctaacccaagatcaactcacaacatcacgtacgacaaagatcgcaagaaccctaa 25045464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 18389187 - 18388942
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||| ||| | |||||||||| |||||||||||| | ||||||| ||||||    
T  18389187 ttacaacttagagcaacacttgcaacttaatgacaataatgatccagcaacagtagaaacagcaacataaacatcttgcaacatagcaacatcgataata 18389088  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||    
T  18389087 acaacttgaatgatataaacaataataatttccatatcatacattttcaacacattatataaatatctcaaac-taaccaacaatcattaatcatttgat 18388989  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctat 252  Q
    | |||||||||||||||||||||||| || ||||| || |||||||||    
T  18388988 ttaggctctctgtaagtctataactt-attaacaaattacattcctat 18388942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 273
Target Start/End: Original strand, 31520365 - 31520545
Alignment:
Q  89 aacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacac 188  Q
    ||||| || ||||||||||||||||||||||  | |||| ||| |||| |||||||||||||||  ||||| |||||||||||||||||| | ||||||     
T  31520365 aacaatattaataataacaacttgaatgataataacaatgatattttctatatcatacattttc--cacataatataaatatcttaaactaa-ccaacaa 31520461  T
Q  189 tcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||| ||||||||||||    
T  31520462 tcattaatcatttgattcaggctctctgtaagtctataactt-attaacaacttccattcctatcccaagataaactcacaacat 31520545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 22501180 - 22501296
Alignment:
Q  155 cacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatct 254  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||     
T  22501180 cacattatataaatatcttaaactaa-ccaacaaacattaatcatttgattcgggctttctgtaagtctataactt-attaacaacttccattcctatcc 22501277  T
Q  255 taagattaactcacaacat 273  Q
     ||||| ||||||| ||||    
T  22501278 caagatcaactcacgacat 22501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 22509114 - 22509230
Alignment:
Q  155 cacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatct 254  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||     
T  22509114 cacattatataaatatcttaaactaa-ccaacaaacattaatcatttgattcgggctttctgtaagtctataactt-attaacaacttccattcctatcc 22509211  T
Q  255 taagattaactcacaacat 273  Q
     ||||| ||||||| ||||    
T  22509212 caagatcaactcacgacat 22509230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 24883698 - 24883814
Alignment:
Q  155 cacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatct 254  Q
    |||| ||||||||||||| ||||| | |||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||| ||||||||||     
T  24883698 cacaatatataaatatctcaaactaa-ccaacaatcattaatcatttgattcaggctctttgtaagtctataactt-attaacaactttcattcctatcc 24883795  T
Q  255 taagattaactcacaacat 273  Q
     ||||| ||||||| ||||    
T  24883796 caagatcaactcactacat 24883814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 5985246 - 5985397
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaaca-taaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||| |||||||  || || ||||| ||| | |||||||||||||    
T  5985246 ttacaacttagaccaacacttgcaacttaatgatattaataattcaacaacaacagagacagcaacagaaaacaacttgccacatagcaacatcaataat 5985345  T
Q  104 ---aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
       ||||||||| ||||||||| ||| | || |||| ||||||||| ||||||    
T  5985346 aacaacaacttggatgatataa-caacattattttctatatcataccttttca 5985397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 303
Target Start/End: Original strand, 27860454 - 27860743
Alignment:
Q  10 acttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaac 109  Q
    |||| |||||| |||||||||||||||| | |||| || ||||||||||| ||| | |||||| | || ||||||||| |||||||   |||||||||||    
T  27860454 actttgaccaatacttgcaacttaatgatattaataat-caacaacagcaaagacaacaacatcaacaacttgcaacataacaacactgataataacaac 27860552  T
Q  110 ttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat-ttgattcag 208  Q
    ||||||||||| | ||| ||| ||||| |||||||||| ||||  ||||| |||||  |||| | || ||| ||||||  |||||||||| || ||||||    
T  27860553 ttgaatgatatgaacaacaat-atttctatatcatacaatttc--cacataatatatctatc-tcaatttaaccaaca-acattaatcatattaattcag 27860647  T
Q  209 gctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     ||| ||  ||| |||||  || | |||||||||||||||||| |  || ||  |||||| ||||| |||||||| ||||||||||||||| ||||    
T  27860648 actcacttaaagactatacatttaaaaacaacttccattcctaccccaatgaccaactcagaacattacgtgcgataaagatcgcaagaacactaa 27860743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 303
Target Start/End: Original strand, 44071673 - 44071950
Alignment:
Q  22 acttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatata 121  Q
    |||||||||||||||| | |||| || ||||||||||| ||| | |||||| | || ||||||||| |||||||  ||||||||||||||||| |||||     
T  44071673 acttgcaacttaatgatattaataat-caacaacagcaaagacaacaacatcaacaacttgcaacataacaacactaataataacaacttgaacgatatg 44071771  T
Q  122 agcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat-ttgattcaggctctctgtaag 220  Q
    | ||| ||| ||||| |||||||||| ||||  ||||| |||||  ||||| ||| ||| ||||||  || ||||||| || |||||| ||| ||| |||    
T  44071772 aacaacaat-atttctatatcatacaatttc--cacataatatatgtatctcaaa-ttatccaaca-acaataatcatgttaattcagactcactgaaag 44071866  T
Q  221 tctataacttaataaacaacttccattccta-tcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     | |||   | ||||||||||| ||||||||  |  ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  44071867 acaatacaattataaacaacttacattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacactaa 44071950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 303
Target Start/End: Original strand, 27851748 - 27852037
Alignment:
Q  10 acttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaac 109  Q
    |||| |||||| |||||||||||||||| | |||| ||| |||||||||| ||| | |||||| |  | ||||||||| |||||||   |||||||||||    
T  27851748 actttgaccaatacttgcaacttaatgatattaataatt-aacaacagcaaagacaacaacatcaataacttgcaacataacaacactgataataacaac 27851846  T
Q  110 ttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat-ttgattcag 208  Q
    ||||||||||| | ||| ||| ||||| |||||||||| ||||  ||||| |||||  ||| || || ||| ||||||  |  ||||| | || ||||||    
T  27851847 ttgaatgatatgaacaacaat-atttctatatcatacaatttc--cacataatatatgtat-ttcaaattaaccaaca-actataatcttattaattcag 27851941  T
Q  209 gctctctgtaagtctataacttaataaacaacttccattccta-tcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     ||| ||| ||| |||||  || ||||| ||||||||||||||  |  ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  27851942 actcactgaaagactatacatttataaagaacttccattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacactaa 27852037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 3538946 - 3539044
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || |||||||  | || ||||||||| ||||||||||| || ||||||||||||||||| | ||| ||| ||||| ||||||||||    
T  3538946 tcaacaacagcattgacagcaacaacaacaacttgcaacataacaacatcaacaacaacaacttgaatgatatgaacaacaat-atttctatatcataca 3539044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 6478166 - 6478023
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||| ||||| | |||| |||||||| ||||||  | ||||| |||| || ||||||||| | ||| || ||||| ||||||||||||||||||| |||    
T  6478166 caactcaatgatattaataattcaacagcagcagcaacagcaatataagcaacttgcaacatagcaatattaataacaacaacttgaatgatataaacaa 6478067  T
Q  127 taataatttccatatcatacattttcaacacattatataaatat 170  Q
      | | |||| ||||||| ||||||| ||| | |||||| ||||    
T  6478066 cgacattttctatatcatccattttccacataatatatatatat 6478023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 10039826 - 10039762
Alignment:
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcaca 269  Q
    |||||| |||||||||||||||||||| || |||||||||||||| ||||  ||||| ||||||||    
T  10039826 ttcaggttctctgtaagtctataactt-attaacaacttccattcatatcccaagatcaactcaca 10039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 23287583 - 23287654
Alignment:
Q  232 ataaacaacttccattcctatcttaag-attaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||| |||| |||||||||| | |||| || ||||||||||||| ||||||||||||||||||| ||||||||    
T  23287583 ataatcaacctccattcctaccctaaggatcaactcacaacatctcgtgcgacaaagatcgcaa-aaccctaa 23287654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 303
Target Start/End: Complemental strand, 18391124 - 18390922
Alignment:
Q  99 ataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca 198  Q
    |||||||||||||||||||||| | ||| |||| || | |||||||| ||||||  ||||| |||||  || || ||| ||| ||||||   || |||||    
T  18391124 ataataacaacttgaatgatatgaacaacaatatttccgatatcatatattttc--cacataatatatgtagctcaaa-ttaaccaacaaaaat-aatca 18391029  T
Q  199 t-ttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaag-attaactcacaacatcacgtgcgacaaagatcgcaaga 296  Q
    | || ||| || ||| ||| ||| ||||| ||| ||||||||||| |||||||| |  ||| |  |||||| |||||||||||||||||||||||||| |    
T  18391028 tattaatttagactcactgaaaggctatacctttataaacaactttcattcctaccccaaggaccaactcataacatcacgtgcgacaaagatcgcaaca 18390929  T
Q  297 accctaa 303  Q
    || ||||    
T  18390928 acactaa 18390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 23005001 - 23005047
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaacaaggt 309  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  23005001 aactcataacatcccgtgcgacaaagatcgcaa-aaccctaacaaggt 23005047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 14693461 - 14693521
Alignment:
Q  91 caacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    |||||| ||| ||||||||||||||||||||| ||  |||| |||| |||||||||||||||    
T  14693461 caacattaatcataacaacttgaatgatataa-catcaatattttctatatcatacattttc 14693521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 21368056 - 21368121
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattata 163  Q
    |||||| ||| |||||||||||||| ||||||||||||  |||||| |||| ||| ||| ||||||    
T  21368056 aataatgacatcttgaatgatataaacaataataatttatatatcaaacatcttccacatattata 21368121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25141504 - 25141545
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||||||||||||||||||| ||||    
T  25141504 aactcagaacgtcacgtgcgacaaagatcgcaagaacactaa 25141545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 297
Target Start/End: Complemental strand, 19762114 - 19761824
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||||| | ||||||||||||||    
T  19762114 ttacaacttagtcca-cacttgcaacttaatgacaataatgattcaacagcagcagagacatcaacataaacatcttgcaacatagcaacatcaataata 19762016  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||| ||||||||||||||||    
T  19762015 acaacttgaatgatataatcaataataatttccatatcatacattttcaacacattatacaaatatcttaaac-taatcaacaatcattaatcatttgat 19761917  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaa 297  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  19761916 tcaggctctctgtaagtttgtaacttaataaacaacttcctttcctatctcaagatcaactcacaacatcatgtgcgacaaagatcgcaagaa 19761824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 38057541 - 38057275
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | | |||||||| |||||||||||| | ||||||||||||||    
T  38057541 ttacaacttagaccaacatttgcaacttaatgacaataatggttcaacaacagcagaaacaacaacataaacatcttgcaacatagcaacatcaataata 38057442  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| | |||| ||||||||||||||||    
T  38057441 acaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaa-ttaactaacaatcattaatcatttgat 38057343  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  38057342 tcaggctctctgtaagtctataacttaat-aacaactttcattcctatcccaagattaactcacaacat 38057275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 303
Target Start/End: Original strand, 24726488 - 24726776
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||        |  |||| |    
T  24726488 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagacagcaacataaacatcttgcaaca--------ttgataaca 24726579  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    ||| |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||  ||||| ||||||||||||||||    
T  24726580 acagcttgaatgatataaacaataataatttccatatcatacgttttcaacacgttatataaatatcttaaa-ttaatcaacaatcattaatcatttgat 24726678  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    ||||||||||||||||||||| ||||||| |||||| |||| |||||||  | ||| ||||| |||||||||||||||||| |||||||||||||||||    
T  24726679 tcaggctctctgtaagtctatgacttaat-aacaacctccactcctatccgaggatcaactctcaacatcacgtgcgacaaggatcgcaagaaccctaa 24726776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 8276880 - 8276616
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| | | ||||||||  ||||||||||| |||||||||||||| |    
T  8276880 ttacaacttagaccaacacttgcaacttaataacaataatggttcaacaagagcagaaacatcaacataaatatcttgcaacataacaacatcaataaca 8276781  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||| |  |||||||||||||||| || |||||| ||||||||||||||||    
T  8276780 acaacttgaatgatatatacaataataatttctatatcatacattttcaacacct--tataaatatcttaaac-taaccaacaatcattaatcatttgat 8276684  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  8276683 tcaggctctctataagtctataacttaat-aacaacttccattcctatcccaagatcaactcacaacat 8276616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 9 - 273
Target Start/End: Original strand, 22349754 - 22350016
Alignment:
Q  9 aacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaa 108  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| | | | |||||||| |||||||||||| | ||||||| ||||||| ||    
T  22349754 aacttaaaccaacactagcaacttaatgacaataatgattcaacaacagcaaaaacaacaacataaacatcttgcaacatagcaacatcgataataataa 22349853  T
Q  109 cttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcag 208  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||| ||    
T  22349854 cttgaatgatataaacaataataatttccatatcatacattttcaacacattatataaatatctcaaac-taaccaacaatcattaatcatttgatttag 22349952  T
Q  209 gctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||| |||||||||||||||| || |||||||||||||||||||  ||||| ||||| ||||||    
T  22349953 gctctttgtaagtctataactt-attaacaacttccattcctatcccaagatcaactctcaacat 22350016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 8 - 312
Target Start/End: Original strand, 45754623 - 45754928
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||| | ||||| | |||| || ||| |||||||||||  |||||||||  || |||| |||| | | |||| |||| ||||    
T  45754623 caacttagaccaacacttgcaattaaatgatattaataat-caataacagcagagactgcaacataaatcaacttgtaacatagccacattaatactaac 45754721  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgatt- 205  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||| | | ||||||||||||| ||||| | |||||| ||||||||||||| |||     
T  45754722 aacttggatgatataaacaataacaatttccatatcatacattttcaatataatatataaatatctcaaactaa-ccaacaatcattaatcattttattt 45754820  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aac 304  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||||| |||    
T  45754821 caggctctctgtaaatctataacttaataaacaacttccattcctatcccaagatcaactcacaacatcacatgcgacaaagatcgcaagaaccctaaac 45754920  T
Q  305 aaggttga 312  Q
    ||||||||    
T  45754921 aaggttga 45754928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 44822986 - 44822746
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||||||||||||||||  || ||||||||| |   | || ||||||||||||||||||||||||| |||    
T  44822986 caacttaatgatattaataat-caacaacagcagagatagcaacataggcaacttgcaacatagtgatattaataataacaacttgaatgatataaacaa 44822888  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  | ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||    
T  44822887 cgatattttctatatcatacattttc--ctcataatataaatatcttaaactaa-ctaacaatcattaatcatttgattcaggctctctgtaagtctata 44822791  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    || |||| ||||||||||||| |||||  ||||| ||||||||||||    
T  44822790 acctaat-aacaacttccatt-ctatcccaagatcaactcacaacat 44822746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 48 - 273
Target Start/End: Complemental strand, 7792697 - 7792476
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||| ||| |||||||||| || ||||||||| | ||| || |||||||||||||||||||||||   |||  ||| |||| ||||||||||    
T  7792697 tcaacaacagcaaagacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatatttacaacgatattttctatatcataca 7792598  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    |||||  | ||| |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  7792597 ttttc--ctcataatataaatatcttaaactaa-ccaacaatcattaatcatttgattcaggctctctgtatgtctataactt-attaacaacttccatt 7792502  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| || |||||||||    
T  7792501 cctatcccaagatcaaatcacaacat 7792476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 52 - 273
Target Start/End: Complemental strand, 21181166 - 21180949
Alignment:
Q  52 caacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacatttt 151  Q
    ||||||||| || | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||||| |||||    
T  21181166 caacagcagggacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatatatttt 21181067  T
Q  152 caacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattccta 251  Q
       | ||| ||||||||||||||| || | | |||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||    
T  21181066 t--ctcataatataaatatcttaagctaa-ctaacaatcattaatcatttgattcaggctctctataagtctataactt-attaacaacttccattccta 21180971  T
Q  252 tcttaagattaactcacaacat 273  Q
    ||  || || ||||||||||||    
T  21180970 tcccaaaatcaactcacaacat 21180949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 98 - 273
Target Start/End: Complemental strand, 24815644 - 24815476
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatc 197  Q
    ||||||||||||||||||||||||| | ||| |   ||| |||||||||||||||  | ||| |||||||||||||||||| | |||||| |||||||||    
T  24815644 aataataacaacttgaatgatataaacgatatt---ttctatatcatacattttc--ctcataatataaatatcttaaactaa-ccaacaatcattaatc 24815551  T
Q  198 atttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||||||||  ||||| ||||||||||||    
T  24815550 atttgattcaggctctttgtaagtctataactt-attaacaacttccattcctatcccaagatcaactcacaacat 24815476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 1642603 - 1642751
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatga-ttcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||| ||||| | || |||||| |||    
T  1642603 ttacaacttagaccaactcttgcaacttaatgacaataatgatttcaacaacagcagagacaacaacataaacatcttacaacatagcagcatcaacaat 1642702  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
    |||| |||||||||||||| ||| | || |||| ||| ||||||||||||    
T  1642703 aacatcttgaatgatataa-caacattattttctataacatacattttca 1642751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 16400854 - 16401096
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatga-tataagca 125  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| |  || || |||||||||||||||||||| ||||| ||    
T  16400854 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagaaatattaataataacaacttgaatgactataaaca 16400952  T
Q  126 ataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctat 225  Q
    |  ||| |||| || |||||||||||   | ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||| |||||||||||||    
T  16400953 acgatattttctatctcatacattttt--ctcataatataaatatcttaaactaa-ctaacaatcattaatcatttgattcaggctttctgtaagtctat 16401049  T
Q  226 aacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||| || |||||| ||||||||| ||  ||||| |||||| |||||    
T  16401050 aactt-attaacaacctccattcctgtcccaagatcaactcaaaacat 16401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 42696884 - 42697032
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| | |||||| || || ||||||||  | |||||| |||||     
T  42696884 ttacaacttagaccaacacttgcaacttaatgatattaatgactcaacaacagcagagacaacaacataaaacaacttgcaacgtagcaacattaataac 42696983  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
    |||| |||| ||||||||| ||| | || |||| ||||||||| ||||||    
T  42696984 aacatcttggatgatataa-caacattattttctatatcataccttttca 42697032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 52983332 - 52983456
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||| ||||||| | |||||||| || ||||||||| |||||||| ||||||||||||||||||||||||| |||    
T  52983332 caacttaatgatattaataat-caacaactgcagagacatcaacataagcaacttgcaacataacaacattaataataacaacttgaatgatataaacaa 52983430  T
Q  127 taataatttccatatcatacattttc 152  Q
      ||| |||| |||||||||||||||    
T  52983431 cgatattttctatatcatacattttc 52983456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 51476144 - 51476287
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataaca 107  Q
    ||||||||||||||||||||| |||||||| | |||| || ||||||||| ||||| | |||||||| || ||||||||| | |||||| ||||||||||    
T  51476144 caacttagaccaacacttgcagcttaatgatattaataat-caacaacagtagagagaacaacataaacaacttgcaacatagcaacattaataataaca 51476242  T
Q  108 acttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    |||||||| |||||| |||   || | || |||||||||||||||    
T  51476243 acttgaataatataaacaacggtattatctatatcatacattttc 51476287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 18275122 - 18275226
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||| || | |||||||| || ||||||||| | |||| | ||||||||||||||||||||||||| ||| |||| |||| ||||||||||    
T  18275122 tcaacaacagcagggacaacaacataaacaacttgcaacatagcaacgttaataataacaacttgaatgatataaacaacaatattttctatatcataca 18275221  T
Q  148 ttttc 152  Q
    |||||    
T  18275222 ttttc 18275226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 18823813 - 18823930
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| |||||||||| || ||||||||| ||||| || ||||| ||||||||||||||||||| |||  | | |||| |||||||| |    
T  18823813 tcaacaacagcagagacagcaacataagcaacttgcaacataacaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatata 18823912  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  18823913 ttttccacataatatata 18823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 18270468 - 18270572
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||| || | |||||||| || ||||||||| |||||| | ||||||||||||| |||||||||||  || |||| |||| ||||||||||    
T  18270468 tcaacaacagcagggacaacaacataaacaacttgcaacataacaacgtaaataataacaactagaatgatataaaaaacaatattttctatatcataca 18270567  T
Q  148 ttttc 152  Q
    |||||    
T  18270568 ttttc 18270572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 13528639 - 13528522
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||  | |||||||||| || ||||||||| | ||| || ||||| ||||||||||||||||||| |||  | | |||| ||||||||||    
T  13528639 tcaacaacagcagcaacagcaacataagcaacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcataca 13528540  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  13528539 ttttccacataatatata 13528522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 21240095 - 21240023
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatat 120  Q
    ||||||||| ||  || ||||||| || || ||||||||| ||||||||||| ||||||||||||||||||||    
T  21240095 tcaacaacaacattgacagcaacacaaacaacttgcaacataacaacatcaacaataacaacttgaatgatat 21240023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 165
Target Start/End: Original strand, 13301957 - 13302110
Alignment:
Q  10 acttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaac 109  Q
    |||| |||||| |||||||||||||||| | |||| ||  |||||||| | ||| | |||||| |  | ||||||||| |||||||   |||||||||||    
T  13301957 actttgaccaatacttgcaacttaatgatattaataata-aacaacagaaaagacaacaacatcaaaaacttgcaacataacaacactgataataacaac 13302055  T
Q  110 ttgaatgatataagcaataataatttccatatcatacattttcaacacattatata 165  Q
    ||||||||||| | ||| ||| ||||| |||||||||| |||| ||| | ||||||    
T  13302056 ttgaatgatatgaacaacaat-atttctatatcatacaatttccacataatatata 13302110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 11809416 - 11809363
Alignment:
Q  9 aacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagaga 63  Q
    ||||||||||||||||||||||||||||| | |||| | ||||||||||||||||    
T  11809416 aacttagaccaacacttgcaacttaatgatattaat-aatcaacaacagcagaga 11809363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 10813349 - 10813273
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatca 143  Q
    |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| ||||||    
T  10813349 caacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatca 10813273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 20587940 - 20587993
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||||||||||||| ||| | || |||| |||||||||||||||    
T  20587940 aataataacaacttgaatgatataa-caacattattttctatatcatacattttc 20587993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 20592478 - 20592531
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||||||||||||| ||| | || |||| |||||||||||||||    
T  20592478 aataataacaacttgaatgatataa-caacattattttctatatcatacattttc 20592531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 20346051 - 20346095
Alignment:
Q  258 gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||    
T  20346051 gattaactcataacatctcgtgcgacaaagatcgcaa-aaccctaa 20346095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 22124536 - 22124577
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| ||||||||||||| |||||||||||||||||    
T  22124536 aactcataacctcacgtgcgacaaggatcgcaagaaccctaa 22124577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 42697086 - 42697179
Alignment:
Q  211 tctctgtaagtctataacttaataaacaacttccattcctatcttaag-attaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| ||| | ||| |||||||||||||||||||| |  ||| || |||||| ||||| |||||| | ||||||||||||||| ||||    
T  42697086 tctctgaaaggctaaacctttataaacaacttccattcctaccccaaggatcaactcataacataacgtgcaaaaaagatcgcaagaacactaa 42697179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 23073118 - 23073146
Alignment:
Q  9 aacttagaccaacacttgcaacttaatga 37  Q
    |||||||||||||||||||||||||||||    
T  23073118 aacttagaccaacacttgcaacttaatga 23073146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 5 - 303
Target Start/End: Original strand, 10953136 - 10953433
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||| | ||||||||| ||||    
T  10953136 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagacaacaacataaacatcttgcaacatagcaacatcaacaata 10953235  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |  ||||| ||||||||||||||||    
T  10953236 acaacttgaatggtataaacaataataatttccatatcatacattttcaacacattatacaaatatcttaaac-aattcaacaatcattaatcatttgat 10953334  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    ||||| |||||||||| || |||||||||||| ||||||||||||||||  ||| | |||||||||| |||||||||||||||||||||||||||||||    
T  10953335 tcaggttctctgtaagcctgtaacttaataaataacttccattcctatcccaaggtcaactcacaacttcacgtgcgacaaagatcgcaagaaccctaa 10953433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 273
Target Start/End: Complemental strand, 24277432 - 24277230
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| || ||||||||| | ||| || ||||||||||||||||||| ||||| |||  ||| |||| |||||||||||||||  | ||| |||||     
T  24277432 caacataagcaacttgcaacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttc--ctcataatatat 24277335  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactc 266  Q
    ||||||||||| || | |||| |||||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||  ||||| |||||    
T  24277334 atatcttaaac-taactaacaatcattaatcatttgattcagactctctgaaagtctataactt-attaacaacttccattcctatcccaagatcaactc 24277237  T
Q  267 acaacat 273  Q
    |||||||    
T  24277236 acaacat 24277230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 24384781 - 24384983
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| || ||||||||| | ||| || ||||||||||||||||||| ||||| |||  ||| |||| |||||||||||||||  | ||| |||||     
T  24384781 caacataagcaacttgcaacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttc--ctcataatatat 24384878  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactc 266  Q
    ||||||||||| || | |||| |||||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||  ||||| |||||    
T  24384879 atatcttaaac-taactaacaatcattaatcatttgattcagactctctgaaagtctataactt-attaacaacttccattcctatcccaagatcaactc 24384976  T
Q  267 acaacat 273  Q
    |||||||    
T  24384977 acaacat 24384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 17812622 - 17812824
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||| |||||| |  | ||| ||||||    
T  17812622 caacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttcc--ctcataatataa 17812719  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactc 266  Q
    ||||||||||| || | |||| |||||||||||||||||||| |||| |||||||||||||||| || |||||||| ||||||||||  ||||| |||||    
T  17812720 atatcttaaac-taactaacaatcattaatcatttgattcagactctttgtaagtctataactt-attaacaactttcattcctatcccaagatcaactc 17812817  T
Q  267 acaacat 273  Q
    |||||||    
T  17812818 acaacat 17812824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 23200446 - 23200328
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatga-ttcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||| | |||||||| |||||| ||||| | || |||||| |||    
T  23200446 ttacaacttagaccaactcttgcaacttaatgacaataatgatttcaacaacagcatagacaacaacataaacatcttacaacatagcagcatcaacaat 23200347  T
Q  104 aacaacttgaatgatataa 122  Q
    |||| ||||||||||||||    
T  23200346 aacatcttgaatgatataa 23200328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 17875313 - 17875424
Alignment:
Q  157 cattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatctta 256  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||| ||||  |    
T  17875313 cattatataaatatcttaaactaa-ccaacaatcattaatcatttgattcagactctctgtaagtctataactt-attaacaactaccattcatatccca 17875410  T
Q  257 agattaactcacaa 270  Q
    |||| |||||||||    
T  17875411 agatcaactcacaa 17875424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 25250779 - 25250631
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataat 103  Q
    |||||||||||||||||| |||||||||||||| | |||| ||||||||| || ||||| | |||||| || || ||||||||| | |||||| |||||     
T  25250779 ttacaacttagaccaacatttgcaacttaatgatattaataattcaacaatagtagagacaacaacataaaacaacttgcaacatagcaacattaataac 25250680  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
    ||||| ||| ||||||| | ||| | || |||| ||||||||||||||||    
T  25250679 aacaaattggatgatat-atcaacattattttctatatcatacattttca 25250631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 25314564 - 25314416
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataat 103  Q
    |||||||||||||||||| |||||||||||||| | |||| ||||||||| || ||||| | |||||| || || ||||||||| | |||||| |||||     
T  25314564 ttacaacttagaccaacatttgcaacttaatgatattaataattcaacaatagtagagacaacaacataaaacaacttgcaacatagcaacattaataac 25314465  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
    ||||| ||| ||||||| | ||| | || |||| ||||||||||||||||    
T  25314464 aacaaattggatgatat-atcaacattattttctatatcatacattttca 25314416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 8952915 - 8952791
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| | |||||||| || ||||||||| | ||| || ||||| ||||||||||||||||||| |||    
T  8952915 caacttaatgatattaataat-caacaacaacagagacaacaacataagcaacttgcaacatagcaatattaataacaacaacttgaatgatataaacaa 8952817  T
Q  127 taataatttccatatcatacattttc 152  Q
      | | |||| |||||||||||||||    
T  8952816 cgacattttctatatcatacattttc 8952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 41876414 - 41876311
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||    
T  41876414 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaa 41876316  T
Q  127 taata 131  Q
     ||||    
T  41876315 caata 41876311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 20470010 - 20469718
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatca-ataataac 106  Q
    |||||| |||||||| |||||||||||||| | |||| || ||||||||||| ||| | |||||| | || |||||| || | ||||| |  |||| |||    
T  20470010 caactttgaccaacatttgcaacttaatgatattaataat-caacaacagcaaagacaacaacatcaacaacttgcagcata-caacaactgataaaaac 20469913  T
Q  107 aacttgaatgata-taagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttga-t 204  Q
    ||||||||||||| | | ||  |||| | || |||||||||| ||||  ||||| |||||  ||||| ||| ||| ||||||  |||||||||||| | |    
T  20469912 aacttgaatgataatgaacatcaata-tctctatatcatacaatttc--cacataatatatgtatctcaaa-ttaaccaacaa-cattaatcattttaat 20469818  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||| ||||||| ||| |||||  || ||||||||||||| |||||  |  || ||  |||||| || ||||||||||||||||||||||||||| ||||    
T  20469817 tcagactctctgaaaggctatacatttataaacaacttcctttcctgccccaaagaccaactcataatatcacgtgcgacaaagatcgcaagaactctaa 20469718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 21618705 - 21618634
Alignment:
Q  232 ataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||||||||||||| |  ||||  |||| | ||| | |||||||| ||||||||||||||||||||    
T  21618705 ataaacaacttccattcctacccaaagaccaacttagaacgttacgtgcgaaaaagatcgcaagaaccctaa 21618634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 26740516 - 26740470
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaacaaggt 309  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  26740516 aactcacaacatctcttgcgacaaagatcgcaa-aaccctaacaaggt 26740470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 22357747 - 22357686
Alignment:
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatata 165  Q
    ||||||||||||||||||| ||| || | |||| ||||||||||||||| ||| | ||||||    
T  22357747 aacaacttgaatgatataaacaacaacattttctatatcatacattttccacataatatata 22357686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 23470053 - 23470094
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  23470053 aactcataacatctcctgcgacaaagatcgcaagaaccctaa 23470094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 25250532 - 25250491
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||||||||||||||||||||| |||||||| ||||    
T  25250532 aactcataacatcacgtgcgacaaagattgcaagaacactaa 25250491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 25314317 - 25314276
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||||||||||||||||||||| |||||||| ||||    
T  25314317 aactcataacatcacgtgcgacaaagattgcaagaacactaa 25314276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 303
Target Start/End: Complemental strand, 53524 - 53228
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| | ||||||||||||||    
T  53524 ttacaactttaaccaacacttgcaacttaatgacaataatgattcaacaacaacagagacagcaacataaacatcttgcaacatagcaacatcaataata 53425  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| ||||||||||||||||    
T  53424 acaacttgaatgatataa-aaataataatttccatatcatacattttcaatacattatataaatatcttaaac-taaccaacaatcattaatcatttgat 53327  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||||||| |||||||| ||||||||||| ||||||||||  | ||| |||||||||||||||||  ||||||||| |||||||||||||    
T  53326 tcaggccctctgtaagtttataacttgataaacaactttcattcctatcccaggatcaactcacaacatcacgtttgacaaagattgcaagaaccctaa 53228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 312
Target Start/End: Complemental strand, 12512708 - 12512401
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| | ||||||||| ||||    
T  12512708 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacaacagagatagaaacataaacatcttgcaacatagcaacatcaacaata 12512609  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||  |  ||||| |||| |||||||||||    
T  12512608 acaacttgaatgatataaacaataataatttccatatcattcattttcaacacattataaaaatatcttaaac-aattcaacaatcatcaatcatttgat 12512510  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    ||||| ||||||||||||| |||||||||||  ||||| |||| ||| |  ||||| ||||| |||||||||||||||||||||||||||||||||| ||    
T  12512509 tcaggttctctgtaagtctgtaacttaataactaactttcatttctaccccaagatcaactctcaacatcacgtgcgacaaagatcgcaagaaccctaaa 12512410  T
Q  304 caaggttga 312  Q
    |||||||||    
T  12512409 caaggttga 12512401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 14642440 - 14642174
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |   |||||||| |||||||||||| | ||||||||||||||    
T  14642440 ttacaacttagaccaacacttgcaacttaatgacaataatggttcaacaacagcagaaaacacaacataaacatcttgcaacatagcaacatcaataata 14642341  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||    
T  14642340 acaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaac-taaccaacaatcattaatcatttgat 14642242  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||||  ||||| ||||||||||||    
T  14642241 tcaggctctctgtaagtctataacttaat-aacaactttcattcatatcccaagatcaactcacaacat 14642174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 6158559 - 6158825
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| | |||||||||| |||||||||||| | ||||||||||||||    
T  6158559 ttacaacttagaccaacactttcaacttaatgacaataatggttcaacaacaacagaaacagcaacataaacatcttgcaacatagcaacatcaataata 6158658  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  6158659 acaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaa-ttaaccaacaatcattaatcatttgat 6158757  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| ||||| || ||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  6158758 tcagactctcggttagtctataacttaat-aacaacttccattcctatcccaagatcaactcacaacat 6158825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 37037980 - 37038246
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||| |||||||||||| | ||||||||||||||    
T  37037980 ttacaacttagaccaacacttgcaacttaatgacaataatggttcaacaacaacagaaacagcaacataaacatcttgcaacatagcaacatcaataata 37038079  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  37038080 acaatttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaa-ttaaccaacaatcattaatcatttgat 37038178  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||| ||||  ||||| |||||| |||||    
T  37038179 tcaggctctctttaactctataacttaat-aacaacttccattcttatccaaagatcaactcaaaacat 37038246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 42325111 - 42324845
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||| | |||||| |||||||    
T  42325111 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagaaacatcaacataaacatcttgcaacatagcaacatgaataata 42325012  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| || |||||| ||||||||||||||||    
T  42325011 acaacttgaatgatataaacaataataatttccatatcatacattttcaacacattatatagatatctcaaac-taaccaacaatcattaatcatttgat 42324913  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| |||| | |||||||||| ||| || |||||||||||||  ||||  ||||| ||||||||||||    
T  42324912 tcagactctatctaagtctatacctt-attaacaacttccatttatatcccaagatcaactcacaacat 42324845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 4 - 312
Target Start/End: Complemental strand, 14251006 - 14250706
Alignment:
Q  4 cttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||    
T  14251006 cttacaacttagaccaacacttgcaacttaatgacgataatgattcaacaacagcagagacagcaacataaacatcttgcaacatagcaacatcaataat 14250907  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttga 203  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |  ||||| |||||||||||||||    
T  14250906 aacaacttgaat--tataa-caataataatttccatatcatacattttcaacacattatacgaatatcttaaac-aattcaacaatcattaatcatttga 14250811  T
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaag---attaactcacaacatcacgtgcgacaaagatcgcaagaaccc 300  Q
    |||||| ||||||        |||||||||||  ||||| |||| ||| |  |||   || ||||  ||||||||||||||||||||||||||||||||     
T  14250810 ttcaggttctctg--------taacttaataactaactttcatttctaccccaagaatatcaactttcaacatcacgtgcgacaaagatcgcaagaacct 14250719  T
Q  301 t-aacaaggttga 312  Q
    | |||||||||||    
T  14250718 taaacaaggttga 14250706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 8 - 312
Target Start/End: Complemental strand, 11886558 - 11886254
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||| | ||| | ||||| | ||||||| ||| ||||||||||| ||||||||||  || ||||||||| | | || | |||| ||||    
T  11886558 caacttagaccaacacctccaattaaatgatattaatgat-caataacagcagagacagcaacataaagcaacttgcaacatagccacgttaatactaac 11886460  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    |||||  ||||||||| |||||||||||||||||||||||| ||||||||   || |||||||||| ||||| | | ||||||||||||||||||   ||    
T  11886459 aacttagatgatataaacaataataatttccatatcatacaatttcaacaagatacataaatatctcaaactaaac-aacactcattaatcattttgatc 11886361  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aaca 305  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| || |||||||| ||||| ||||    
T  11886360 agggtctctgtaaatctataacttaataaacaacttccattcctatcccaagatcaactcacaacatcacgtgcgacgaacatcgcaaggaccctaaaca 11886261  T
Q  306 aggttga 312  Q
    |||||||    
T  11886260 aggttga 11886254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 48 - 273
Target Start/End: Complemental strand, 13523256 - 13523035
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| ||||||||||    
T  13523256 tcaacaacagcagagacagcaacataaacaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcataca 13523157  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    |||||  | ||| ||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  13523156 ttttc--ctcataatataaatatcttaaac-taaccaacaatcattaatcatttgattcaggctctctgtaagtctataactt-attaacaacttccatt 13523061  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  13523060 cctatcccaagatcaactcacaacat 13523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 18367623 - 18367382
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| ||| |||||||||||||| |||||||||| || ||||||||| ||||| || ||||||||||||||||||||||||| |||    
T  18367623 caacttaatgatattaataatt-aacaacagcagagacagcaacataagcaacttgcaacataacaatattaataataacaacttgaatgatataaacaa 18367525  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  ||||| ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  18367524 cgatattttcaatatcatacattttc--cacataatataaatatcttaaac-taaccaacaatcattaatcatttgattcaggctctctgtaagtctata 18367428  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    | || || ||||||| ||||| |||||  ||||| ||||||||||||    
T  18367427 a-tttattaacaactcccattgctatcccaagatcaactcacaacat 18367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 3394867 - 3394626
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||| | | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  3394867 caacttaatgatattaataat-caacaacagcagaaacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 3394769  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  ||||| |||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  3394768 cgatattttctatatcatacattttc--cacataatatgaatatcttaaac-taaccaacaatcattaatcatttgattcaggctctctgtaagtctata 3394672  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||||||||||||||  ||||| ||||||||||||    
T  3394671 actt-attaacaacttccattcctatcccaagatcaactcacaacat 3394626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 101 - 273
Target Start/End: Original strand, 10562968 - 10563137
Alignment:
Q  101 aataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatt 200  Q
    |||||||||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  10562968 aataacaacttgaacgatataaacaataataatttttatatcatacattttcaacacattatataaatatcttaaac-taaccaacaatcattaatcatt 10563066  T
Q  201 tgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||||||| ||||| || |||||||| |||||||  ||||| ||||||||||||    
T  10563067 tgattcaggctctctgtaagtctataaattaat-aataacttcca-tcctatcccaagatcaactcacaacat 10563137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 273
Target Start/End: Complemental strand, 179552 - 179331
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||| | | |||||||| || ||||||||| | ||| || |||| |||||||||||||||||  | |||  ||| |||| |||||| |||    
T  179552 tcaacaacagcagaaacaacaacataagcaacttgcaacatagcaatattaatagtaacaacttgaatgataataacaacgatattttctatatcaaaca 179453  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    ||||   ||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||||||||||  | |||||| ||||||    
T  179452 ttttg--cacataatataaatatcttaaactaa-ccaacaatcattaatcatttgattcaggctctctataagtctataactt-cttaacaacctccatt 179357  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  179356 cctatcccaagatcaactcacaacat 179331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 273
Target Start/End: Original strand, 6819367 - 6819537
Alignment:
Q  99 ataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca 198  Q
    |||||||||||||||||||||  | |||  ||| |||| |||||||||||||||  ||||| |||||||||||||||||| | |||||| ||||||||||    
T  6819367 ataataacaacttgaatgataataacaacgatattttctatatcatacattttc--cacataatataaatatcttaaactaa-ccaacaatcattaatca 6819463  T
Q  199 tttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||| |||||||| || || |||| |||||||||||  ||||| ||| ||||||||    
T  6819464 tttgattcaggctctctgtaagtatataactt-atgaagaactcccattcctatcccaagatcaacccacaacat 6819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 20417246 - 20417389
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataaca 107  Q
    |||||||||||||||||||||||||||||| | |||| || ||||||||||||||| | |||||||| || ||||||||| | ||| || ||||||||||    
T  20417246 caacttagaccaacacttgcaacttaatgatattaataat-caacaacagcagagacaacaacataaacaacttgcaacatatcaatattaataataaca 20417344  T
Q  108 acttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||| ||| ||||  ||  |||||||||||||||    
T  20417345 acttgaatgatataaacaacaatatcttttatatcatacattttc 20417389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 303
Target Start/End: Original strand, 13179309 - 13179601
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatc-aataataac 106  Q
    |||||| ||||||||||||||||||||||| | |||| | |||||||||||| |||||||||||| | || |||||||||  |||||| |  ||||||||    
T  13179309 caactttgaccaacacttgcaacttaatgatattaat-aatcaacaacagcaaagatagcaacatcaacaacttgcaaca-tacaacaactgataataac 13179406  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat-ttgatt 205  Q
    |||||||||||||| | ||| |||| |||| ||||||||||||||   ||||| |||||  || || ||| ||| ||||||  || ||||||| || |||    
T  13179407 aacttgaatgatatgaacaacaatattttctatatcatacatttt--tcacataatatatgtagctcaaa-ttaaccaaca-acaataatcatattaatt 13179502  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     || ||| ||| ||| ||||| ||| ||||||||||| ||||||||||  || ||  |||||| ||||| |||||||||||||||||||||||| ||||    
T  13179503 tagactcactgaaaggctatacctttataaacaactttcattcctatcccaaggaccaactcataacattacgtgcgacaaagatcgcaagaacactaa 13179601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 12275887 - 12275977
Alignment:
Q  182 ccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||  ||||| ||||||||||||    
T  12275887 ccaacaatcattaatcatttgattcaggctctctataagtctataactt-attaacaacttccattcctatcccaagatcaactcacaacat 12275977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 14818211 - 14818348
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| |||||||||| || ||||||| ||| ||| || ||||||||||||||||||||||||| |||    
T  14818211 caacttaatgatattaataat-caacaacagcagagacagcaacataagcaacttgcaatacagcaatattaataataacaacttgaatgatataaacaa 14818309  T
Q  127 taataatttccatatcatacattttcaacacattatata 165  Q
      ||| |||| ||||||||||||||| ||| | ||||||    
T  14818310 cgatattttctatatcatacattttccacataatatata 14818348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 13520626 - 13520499
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| | |||||||| || ||||||||| | ||| || ||||||||||| ||||||||||||| |||  ||| |||| ||||||||||    
T  13520626 tcaacaacagcagagacaacaacataagcaacttgcaacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcataca 13520527  T
Q  148 ttttcaacacattatataaatatcttaaac 177  Q
    |||||  | ||| |||||||||||||||||    
T  13520526 ttttc--ctcataatataaatatcttaaac 13520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 23395905 - 23395801
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| | |||||||| || ||||||| | |||||| | ||||||||||||| ||||||||||| ||| |||| |||| ||||||||||    
T  23395905 tcaacaacagcagagacaacaacataaacaacttgcaatataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcataca 23395806  T
Q  148 ttttc 152  Q
    |||||    
T  23395805 ttttc 23395801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 10550478 - 10550579
Alignment:
Q  51 acaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattt 150  Q
    |||| |||| ||| |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||  |||||||| |||||||||||||    
T  10550478 acaatagcaaagacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgataatttctatatcatacattt 10550577  T
Q  151 tc 152  Q
    ||    
T  10550578 tc 10550579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 19569205 - 19569070
Alignment:
Q  10 acttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaac 109  Q
    |||||||||||||||||||||||||||| | |||| | |||||||||||||||| |||||||  | || |||||| || |||||||| || |  || |||    
T  19569205 acttagaccaacacttgcaacttaatgatattaat-aatcaacaacagcagagacagcaacaataacaacttgcatcataacaacattaacagcaataac 19569107  T
Q  110 ttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||| | ||| ||| ||||| ||||||||||    
T  19569106 ttgaatgatatgaacaacaat-atttctatatcataca 19569070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 52213322 - 52213205
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||| | | |||||||| || ||||||| | | |||| ||||||||||||| ||||||||||||| |||  ||| |||| |||| |||||    
T  52213322 tcaacaacagcagaaacaacaacataagcaacttgcaaaatagcaacttcaataataacaatttgaatgatataaacaacgatattttctatataataca 52213223  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  52213222 ttttccacataatatata 52213205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 3803066 - 3803169
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||    
T  3803066 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaa 3803164  T
Q  127 taata 131  Q
     ||||    
T  3803165 caata 3803169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 11850508 - 11850405
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||    
T  11850508 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacatagcaacgttaataataacaactagaatgatataaacaa 11850410  T
Q  127 taata 131  Q
     ||||    
T  11850409 caata 11850405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 12275785 - 12275879
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataa 122  Q
    ||||||||||| | |||| ||| |||||||||||| | |||||||||| || |||| |||| | ||| || |||||||||||||||||||||||||    
T  12275785 caacttaatgatattaataatt-aacaacagcagaaacagcaacataagcaacttgaaacatagcaatattaataataacaacttgaatgatataa 12275879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 17548396 - 17548279
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||| ||||||  | |||||||||| || ||||||||| | ||| || ||||| ||||||||||||||||||| |||  ||  |||| ||||||||||    
T  17548396 tcaacatcagcagcaacagcaacataagcaacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgattttttctatatcataca 17548297  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  17548296 ttttccacataatatata 17548279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 54520668 - 54520771
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| || ||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||    
T  54520668 caacttaatgatattaataat-caacaacaacaaagacagcaacataaacaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaa 54520766  T
Q  127 taata 131  Q
     ||||    
T  54520767 gaata 54520771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 52338830 - 52338693
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| | |||  ||| || ||||||||| | ||| || ||||| |||||||||||||||||||  ||    
T  52338830 caacttaatgatattaataat-caacaacagcagagacatcaatttaatcaacttgcaacatagcaatattaataacaacaacttgaatgatataaataa 52338732  T
Q  127 taataatttccatatcatacattttcaacacattatata 165  Q
      | | |||| ||||||||||||||| ||| | ||||||    
T  52338731 cgacattttctatatcatacattttccacataatatata 52338693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 37427965 - 37428012
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaacaaggt 309  Q
    |||||| |||||| ||||||||||  ||||||||||||||||||||||    
T  37427965 aactcataacatctcgtgcgacaagaatcgcaagaaccctaacaaggt 37428012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 16059618 - 16059684
Alignment:
Q  233 taaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaac 298  Q
    ||||||||||||||||||| |  || ||  |||||| ||||||||||||||||| ||||||||||||    
T  16059618 taaacaacttccattcctaccccaaagaccaactcataacatcacgtgcgacaatgatcgcaagaac 16059684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 41173161 - 41173108
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||||||||||||| ||| | || |||| |||||||||||||||    
T  41173161 aataataacaacttgaatgatataa-caacattattttctatatcatacattttc 41173108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 11258714 - 11258782
Alignment:
Q  83 caacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||| |||| ||| ||||||||||||||||||| ||||| ||| | || |||| |||||||||||||||    
T  11258714 caacataacatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 11258782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 11563037 - 11563078
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||||||||||||||||||| ||||    
T  11563037 aactcagaacgtcacgtgcgacaaagatcgcaagaacactaa 11563078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 16050263 - 16050299
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaac 298  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  16050263 aactcataacatcatgtgcgacaaagatcgcaagaac 16050299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 32402861 - 32402789
Alignment:
Q  232 ataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||| |||| |||||||||| | ||| ||| |||||| |||||| ||||||||||||||||||  ||||||||    
T  32402861 ataatcaacctccattcctaccctaaagatcaactcataacatctcgtgcgacaaagatcgcataaaccctaa 32402789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 5 - 312
Target Start/End: Complemental strand, 892 - 585
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||| ||| ||||||  |||||||||||||||||||||||||| |||||| | |||||||| |||||||||||| | ||||||||||||||    
T  892 ttacaacttagacaaacgcttgcatgttaatgacaataatgattcaacaacaacagagacaacaacataaacatcttgcaacatagcaacatcaataata 793  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| |||||||| ||||  | |||||| ||||||||||||||||    
T  792 acaacttgaatgatataaacaataataattttcatatcatacatttccaacacattatacaaatatctcaaac-caaccaacaatcattaatcatttgat 694  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    ||||||||| ||||| |||||||||||||||| ||||| ||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||| ||    
T  693 tcaggctctttgtaaatctataacttaataaataactttcattcctatcccaagatcaactcacaacttcacgtgcgacaaagatcgcaagaaccctaaa 594  T
Q  304 caaggttga 312  Q
    |||||||||    
T  593 caaggttga 585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 183; Significance: 6e-99; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 303
Target Start/End: Original strand, 397658 - 397955
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||| |||||| | | ||||||||| ||||    
T  397658 ttacaacttagaccaacacttgcaacataatgacaacaatgattcaacaacagcagaggtagcaacataaacattttgcaaaatagcaacatcaagaata 397757  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| ||| || |||||| ||||||||||||| ||    
T  397758 acaacttgaatgatataaacaataataattttcatatcatacatttccaacacattatataaatatcttgaac-taaccaacaatcattaatcatttaat 397856  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||||| |||||||||||||| |||||| ||| ||||||||||  |  || ||||||||||||||||||||||||  ||||||||||||||||    
T  397857 tcaggctctctgaaagtctataacttattaaacagctttcattcctatcccataatcaactcacaacatcacgtgcgacaagtatcgcaagaaccctaa 397955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 127679 - 127387
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatc-aataataac 106  Q
    |||||| ||||||||||||||||||||||| | |||| | |||||||||||| |||||||||||| | || |||||||||  |||||| |  ||||||||    
T  127679 caactttgaccaacacttgcaacttaatgatattaat-aatcaacaacagcaaagatagcaacatcaacaacttgcaaca-tacaacaactgataataac 127582  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat-ttgatt 205  Q
    |||||||||||||| | ||| |||| |||| ||||||||||||||   ||||| |||||  || || ||| ||| ||||||  || ||||||| || |||    
T  127581 aacttgaatgatatgaacaacaatattttctatatcatacatttt--tcacataatatatgtagctcaaa-ttaaccaaca-acaataatcatattaatt 127486  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     || ||| ||| ||| ||||| ||| ||||||||||| ||||||||||  || ||  |||||| ||||| |||||||||||||||||||||||| ||||    
T  127485 tagactcactgaaaggctatacctttataaacaactttcattcctatcccaaggaccaactcataacattacgtgcgacaaagatcgcaagaacactaa 127387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 19534 - 19268
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | | |||||||| |||||||||||| |  |||||||||||||    
T  19534 ttacaacttagaccaacacttgcaacttaatgacaataatggttcaacaacatcagaaacaacaacataaacatcttgcaacatagaaacatcaataata 19435  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||    
T  19434 acaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaac-taaccaacaatcattaatcatttgat 19336  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||  ||||| ||||||||||||    
T  19335 tcaggctctctgtaagtctataactt-attaacaacttccattcctatcccaagatcaactcacaacat 19268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 312
Target Start/End: Complemental strand, 36705558 - 36705251
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||| | |||||| || ||||    
T  36705558 ttacaacttagaccaatacttgcaacttaatgacaataatgattcaacaacagcagagacaacaacataaacatcttgcaacatagcaacatgaacaata 36705459  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| || |||||||| ||||  |  ||||| ||||||||||||||||    
T  36705458 acaacttgaatgatataaacaataataattttcatatcatacattttcaacacattgtacaaatatctcaaac-aattcaacaatcattaatcatttgat 36705360  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||| ||| |  ||  | ||||  |||||||||||||||||||||||||||||||||| ||    
T  36705359 tcaggttctctgtaagtctgtaacttaataaccaacttccatttctaccccaatgtcaactatcaacatcacgtgcgacaaagatcgcaagaaccctaaa 36705260  T
Q  304 caaggttga 312  Q
    |||||||||    
T  36705259 caaggttga 36705251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 17071177 - 17070917
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||| | | |||||||| |||||||||||| | ||||||||||||||    
T  17071177 ttacaacttagaccaacacttgcaacttaatggcaataatggttcaacaacaacagaaacatcaacataaacatcttgcaacatagcaacatcaataata 17071078  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||||||||||     
T  17071077 acaacttgaatgatataaacaataataatttttatatcatacattttcaacaccttatataaatatcttaaac-taaccaacaatcattaatcatttga- 17070980  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
         |||||| ||||||||||||||||| |||||||||||||| ||||  ||||| |||| |||||||    
T  17070979 -----ctctctataagtctataacttaat-aacaacttccattcatatcccaagatcaacttacaacat 17070917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 47094259 - 47094508
Alignment:
Q  22 acttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatata 121  Q
    ||||||||||||||||||||||||||| |||||||||||| | | |||||||| |||||||||||| | ||||||| |||| ||||||||||||||||||    
T  47094259 acttgcaacttaatgacaataatgatttaacaacagcagaaacaacaacataaacatcttgcaacatagcaacatcgataacaacaacttgaatgatata 47094358  T
Q  122 agcaataataatttccatatcataca-ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaag 220  Q
    | ||||||||||||  |||||||||| ||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||| || |||||||||||    
T  47094359 aacaataataattt-tatatcatacatttttcaacacattatataaatatctcaaac-taaccaacaatcattaatcatttgatttagactctctgtaag 47094456  T
Q  221 tctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||||||| || |||||||| ||||| ||||  ||||| ||||||||||||    
T  47094457 tctataactt-attaacaactttcattcatatcccaagatcaactcacaacat 47094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 59242 - 59042
Alignment:
Q  71 ataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatat 170  Q
    |||| |||| ||||||| | |||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  59242 ataaacatcatgcaacatagcaacatcaataataacaatttaaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatat 59143  T
Q  171 cttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaa 270  Q
    ||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||  ||||| |||||||||    
T  59142 cttaaac-taaccaacaatcattaatcatttgattcaggctccctgtaagtctataacttaat-aacaactttcattcctatcccaagatcaactcacaa 59045  T
Q  271 cat 273  Q
    |||    
T  59044 cat 59042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 8757261 - 8757020
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  8757261 caacttaatgatattaataat-caacaacagcagagacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 8757163  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| ||||||||||||||   ||||| ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  8757162 cgatattttctatatcatacatttt--tcacataatataaatatcttaaac-taaccaacaatcattaatcatttgattcaggctctctgtaagtctata 8757066  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||||||||||||||  ||||| ||||||||||||    
T  8757065 actt-attaacaacttccattcctatcccaagatcaactcacaacat 8757020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 97 - 273
Target Start/End: Complemental strand, 13699686 - 13699513
Alignment:
Q  97 caataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaat 196  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||| || || ||| ||||||||    
T  13699686 caataataacaacttgaatgatataaacaataataatttccctatcatacattttcaacacattatataaatatctcaaac-taaccgacagtcattaat 13699588  T
Q  197 catttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||||||||| |||||||||||||||||||||| |  ||||||||||||||||||  ||||| ||||||||||||    
T  13699587 catttgattcagactctctgtaagtctataacttatt--acaacttccattcctatccaaagatcaactcacaacat 13699513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 270
Target Start/End: Complemental strand, 40555608 - 40555370
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  40555608 caacttaatgatattaataat-caacaacagcagagacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 40555510  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  || || ||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  40555509 cgatattttctatatcatacattttc--catataatataaatatcttaaac-taaccaacaatcattaatcatttgatttaggctctctgtaagtttata 40555413  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaa 270  Q
    |||| || ||||||||| |||||||||  ||||| |||||||||    
T  40555412 actt-attaacaacttctattcctatcccaagatcaactcacaa 40555370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 10660149 - 10660019
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||||||||||| | ||||||||||||||    
T  10660149 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcaaagacagcaacgtaaacatcttgcaacatagcaacatcaataata 10660050  T
Q  105 acaacttgaatgatataagcaataataattt 135  Q
    |||||||||||||||||| ||||||||||||    
T  10660049 acaacttgaatgatataaacaataataattt 10660019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 48 - 273
Target Start/End: Complemental strand, 832868 - 832647
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||| |||||| | |||||||| || ||||||||| | ||| || |||||||||||||||||||||||||  ||  ||| ||||  |||||||||    
T  832868 tcaacaacaacagagacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcataca 832769  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    |||||  | ||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  832768 ttttc--ctcataatataaatatcttaaactaa-ccaacactcattaataatttgattcaggctctctgtaagtctataactt-attaacaactttcatt 832673  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  832672 cctatcccaagatcaactcacaacat 832647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 48 - 273
Target Start/End: Complemental strand, 1198048 - 1197827
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||| |||||| | |||||||| || ||||||||| | ||| || |||||||||||||||||||||||||  ||  ||| ||||  |||||||||    
T  1198048 tcaacaacaacagagacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcataca 1197949  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    |||||  | ||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  1197948 ttttc--ctcataatataaatatcttaaactaa-ccaacactcattaataatttgattcaggctctctgtaagtctataactt-attaacaactttcatt 1197853  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  1197852 cctatcccaagatcaactcacaacat 1197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 127 - 297
Target Start/End: Complemental strand, 10659731 - 10659564
Alignment:
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||   || |||| | ||||||||||||||||||||||||||||||| ||||||    
T  10659731 taataatttccatatcatacattttcaacacattatataaatatctcaa--ctaaccaaaaatcattaatcatttgattcaggctctctgtaaatctata 10659634  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaa 297  Q
    ||| | | | ||||||||||| |||||  ||||| |||| |||||||||||||||||||||||||||||||    
T  10659633 actcagt-accaacttccatttctatcccaagatcaacttacaacatcacgtgcgacaaagatcgcaagaa 10659564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 4325243 - 4325484
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||| ||||| || |  ||||||| || ||||||||| |  || || ||||||||||||||||||||||  | |||    
T  4325243 caacttaatgatattaataat-caacaatagcagggacaataacataagcaacttgcaacatagaaatattaataataacaacttgaatgataataacaa 4325341  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| ||||||||||||||||||| |  |||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||    
T  4325342 cgatattttctatatcatacattttcaacata--atataaatatcttaaactaa-ccaacaatcattaatcatttgattcaagctctctgtaagtctata 4325438  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||||||||||||||  ||||| ||||||||||||    
T  4325439 actt-attaacaacttccattcctatcccaagatcaactcacaacat 4325484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 12755571 - 12755330
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| | ||||||||| ||| || ||||  |||| || ||||||||| |  || || ||| |||||||||||||| |||||| |||    
T  12755571 caacttaatgatattaat-actcaacaacaacagggacagcaggataagcaacttgcaacatagaaatattaatcataacaacttgaattatataaacaa 12755473  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  ||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||||||    
T  12755472 cgatattttctatatcatacattttc--cacatgatataaatatcttaaactaa-ccaacaatcattaatcatttgattcaggctctctataagtctata 12755376  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||| ||||||||||  ||||| ||||||||||||    
T  12755375 actt-attaacaactttcattcctatcccaagatcaactcacaacat 12755330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 65 - 273
Target Start/End: Original strand, 13407996 - 13408200
Alignment:
Q  65 agcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatat 164  Q
    |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||    |||  ||| |||| |||||||||||||||  | ||| ||||    
T  13407996 agcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgataattacaacgatattttctatatcatacattttc--ctcataatat 13408093  T
Q  165 aaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaac 264  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||||  || || |||    
T  13408094 aaatatcttaaactaa-ccaacaatcattaatcatttgattcaggctctctgtacgtctataactt-attaacaactcccattcctatcccaaaatcaac 13408191  T
Q  265 tcacaacat 273  Q
    |||||||||    
T  13408192 tcacaacat 13408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 273
Target Start/End: Complemental strand, 13865214 - 13865010
Alignment:
Q  65 agcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatat 164  Q
    |||||||||| || ||||||||| | ||| || |||||||||||||| |||||||  | |||  ||| |||| |||||||||||||||  | ||| ||||    
T  13865214 agcaacataagcagcttgcaacatagcaatattaataataacaacttcaatgataataacaacgatattttctatatcatacattttc--ctcataatat 13865117  T
Q  165 aaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaac 264  Q
    | |||||||||||| | |||||| |||||||| ||||||||||||||||| ||| ||||||||||| || ||||||| |||||||||||  ||||| |||    
T  13865116 acatatcttaaactaa-ccaacaatcattaataatttgattcaggctctccgtacgtctataactt-attaacaactcccattcctatcccaagatcaac 13865019  T
Q  265 tcacaacat 273  Q
    ||| |||||    
T  13865018 tcataacat 13865010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 11053798 - 11053941
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataaca 107  Q
    |||||||||||||||||||||||||||||| | |||| || ||||||||||| ||| | ||||||||  | ||||||| | | |||||| ||||||||||    
T  11053798 caacttagaccaacacttgcaacttaatgatattaataat-caacaacagcatagacaacaacataaagaacttgcaatatagcaacattaataataaca 11053896  T
Q  108 acttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||| ||| |||| |||| |||||||||||||||    
T  11053897 acttgaatgatataaacaacaatattttctatatcatacattttc 11053941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 17130635 - 17130437
Alignment:
Q  1 caacttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaa 99  Q
    ||||||||||||||||||||| ||||||| |||| || | |||| || ||| ||||| ||||| | ||||||||  || ||| ||||| | | |||| ||    
T  17130635 caacttacaacttagaccaacgcttgcaatttaaggatattaataat-caataacagtagagacaacaacataaaacaacttacaacatagccacattaa 17130537  T
Q  100 taataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat 199  Q
    || |||||||||| ||||||||| |||||| |||||| ||||||||||||||||||||| ||||||| ||||| |||| || |||||| ||||| |||||    
T  17130536 tactaacaacttggatgatataaacaataacaatttc-atatcatacattttcaacacaatatataattatctcaaac-taaccaacaatcattgatcat 17130439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 297
Target Start/End: Original strand, 15281429 - 15281715
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaaca-taaccatcttgcaacacaacaacatcaataataac 106  Q
    ||||||||||| |||||||||||||||||| | |||| ||||||||  |||||||| | || || ||| || ||||||||| | ||||||  ||||||||    
T  15281429 caacttagaccgacacttgcaacttaatgatattaataattcaacactagcagagacaacaccattaaacaacttgcaacatagcaacat-tataataac 15281527  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcattt-gatt 205  Q
    |||||| ||||||||| ||| | || |||| |||||||||| ||||  ||||| |||||  ||  || ||  || ||||||  ||||||||||||  |||    
T  15281528 aacttggatgatataa-caacattattttctatatcatacactttc--cacataatatatgta-attcaaaataaccaaca-acattaatcatttaaatt 15281622  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattcctat-cttaagattaactcacaacatcacgtgcgacaaagatcgcaagaa 297  Q
    ||| ||||||| ||| ||||| |||  |||||||||||||||| ||| |  ||||  |||| | |||||||||||||||||||||||||||||    
T  15281623 cagactctctgaaaggctatacctttgtaaacaacttccattcttatcccaaagaccaacttataacatcacgtgcgacaaagatcgcaagaa 15281715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 33001124 - 33001272
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||| |||||||| || || ||||||||| | |||| | |||||     
T  33001124 ttacaacttagaccaacacttacaacttaatgatattaatgcttcaacaacagcagagacagcaacataaaacaacttgcaacatagcaacgttaataac 33001223  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
    || |||||| |||||| || ||| |  | |||| ||||||||||||||||    
T  33001224 aataacttggatgatacaa-caacataattttctatatcatacattttca 33001272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 3289667 - 3289563
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||| |||||| | |||||||| || ||||||||| | |||| ||||||||||||||| ||||||||||| ||| |||| |||| ||||||||||    
T  3289667 tcaacaacaacagagacaacaacataaacaacttgcaacatagcaacgtcaataataacaactcgaatgatataaacaacaatattttctatatcataca 3289568  T
Q  148 ttttc 152  Q
    |||||    
T  3289567 ttttc 3289563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 21735330 - 21735220
Alignment:
Q  65 agcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatat 164  Q
    |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||  | |||  ||| |||| || |||||||||||| ||| |||||||    
T  21735330 agcaacataaacaacttgcaacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacatattatat 21735231  T
Q  165 aaatatcttaa 175  Q
    ||||| |||||    
T  21735230 aaatagcttaa 21735220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 14191954 - 14191786
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||  | | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  14191954 caacttaatgatattaataat-caacaacagcaggtacaacaacataagcaacttgcaacaaagcaatattaataataacaacttgaatgatataaacaa 14191856  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat 199  Q
      ||| |||| |||||| |||||| |  | ||| ||||| ||||||||||| || | |||| |||||||||||    
T  14191855 cgatattttctatatcacacatttcc--ctcataatatagatatcttaaac-taactaacaatcattaatcat 14191786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 303
Target Start/End: Original strand, 4071069 - 4071184
Alignment:
Q  190 cattaatcatttga-ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaag 287  Q
    |||||||||||| | ||||| ||||||| ||| ||||| ||| ||||||||||| |||||  | |  || ||| |||||| ||||| |||||||||||||    
T  4071069 cattaatcattttaattcagactctctgaaaggctatacctttataaacaactttcattctcaccccaaagatcaactcataacattacgtgcgacaaag 4071168  T
Q  288 atcgcaagaaccctaa 303  Q
    ||||||||||| ||||    
T  4071169 atcgcaagaactctaa 4071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 16996472 - 16996513
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  16996472 aactcaaaacctcacgtgcgacaaagatcgcaagaaccctaa 16996513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 19558139 - 19558098
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatat 120  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  19558139 cttgcaacataacaacatcaataacaacaacttgaatgatat 19558098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 11309470 - 11309585
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||| || || | |||||||| || |||||  || ||||| || |||||||||||||||||| |||||| |||    
T  11309470 caacttaatgatattaataat-caacaacagtagggacaacaacataagcaacttgccccataacaatattaataataacaacttgaataatataaacaa 11309568  T
Q  127 taataatttccatatca 143  Q
     |||| |||| ||||||    
T  11309569 caatattttctatatca 11309585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 15096530 - 15096432
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || |||||||  | || ||||||||| |||||||| || || ||||||||||||||||| | ||| ||| ||||| ||||||||||    
T  15096530 tcaacaacagcaatgacagcaacaataacaacttgcaacataacaacattaacaacaacaacttgaatgatatgaacaacaat-atttctatatcataca 15096432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 11066730 - 11066783
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||||||| ||||| ||| | || ||||||||||||||||||||    
T  11066730 aataataacaacttgaatggtataa-caacattattttccatatcatacattttc 11066783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 13892842 - 13892892
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||| |||||| ||||||||||||||||||| |||||| ||||||||||    
T  13892842 aactcataacatctcgtgcgacaaagatcgcaaaaaccctaaacaaggttg 13892892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 130685 - 130644
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  130685 aactcaaaacctcacgtgcgataaagatcgcaagaaccctaa 130644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 13133029 - 13132960
Alignment:
Q  235 aacaacttccattcctatcttaag-attaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    ||||||||||||||||| |  ||| || |||||| ||| |||||||||| ||||||||||||||| ||||    
T  13133029 aacaacttccattcctaccccaaggatcaactcagaacgtcacgtgcgaaaaagatcgcaagaacactaa 13132960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 14189160 - 14188992
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||  | | |||||||| || ||| ||||| | ||| || ||||||||||||||||| ||||||| |||    
T  14189160 caacttaatgatattaataat-caacaacagcaggaacaacaacataagcaacttacaacaaagcaatattaataataacaacttgaaagatataaacaa 14189062  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat 199  Q
      ||| |||  |||||| |||||| |  | ||| ||||| ||||||||||| || | |||| |||||||||||    
T  14189061 cgatattttatatatcacacatttcc--ctcataatatagatatcttaaac-taactaacaatcattaatcat 14188992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 15139360 - 15139427
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||| |||||||| || | ||||||||||| |||||||| ||| ||| ||||| ||||||||||    
T  15139360 cttgcaacataacaacattaacactaacaacttgattgatataaacaacaat-atttctatatcataca 15139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 173; Significance: 5e-93; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 15926 - 16192
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||||||| |||||||||||| | ||||||||||||||    
T  15926 ttacaaattagactaacacttgcaacttaatgacaataatggttcaacaacagcagaaacatcaacataaacatcttgcaacatagcaacatcaataata 16025  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||| |||||| ||||||||||||| ||    
T  16026 acaacttgaatgatataaacaataataatttctatatcatacatttacaacaccttatataaatatcttaaa-ttaaccaacaatcattaatcatttaat 16124  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  16125 tcagactctctgtaagtctataacttaat-aacaactttcattcctatctcaagatcaactcacaacat 16192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 13108 - 13374
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | | |||||||| |||||||||||| |  |||||||||||||    
T  13108 ttacaacttagaccaacacttgcaacttaatgacaataatggttcaacaacagcagcaacaacaacataaacatcttgcaacatagaaacatcaataata 13207  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  13208 acaacttgaatgatataaacaataataatttctatatcatacatttgcaacaccttatataaatatcttaaa-ttaaccaacaatcattaatcatttgat 13306  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||| ||||||||||||||||| ||||||||||| || ||||  ||||| ||||||||||||    
T  13307 tcaggctctctataagtctataacttaat-aacaacttccaatcatatcccaagatcaactcacaacat 13374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 292
Target Start/End: Original strand, 17577 - 17860
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    ||||| |||||||||||||||| | ||||| | |||| || ||| ||||| ||||| ||||||||||  || ||||||||| | | |||| |||| ||||    
T  17577 caactcagaccaacacttgcaattaaatgatattaatcat-caataacagtagagacagcaacataaaacaacttgcaacatagccacattaatactaac 17675  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    | |||| ||||||||| |||||| ||||||||||||||||| |||||| | | || |||||||||| ||||| | ||||||||||||||||||||   ||    
T  17676 accttggatgatataaacaataacaatttccatatcatacaatttcaatataatacataaatatctcaaactaa-ccaacactcattaatcattttgatc 17774  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgc 292  Q
    ||| ||||||||| |||||||||| |||||||||||||||||||||   ||||| |||||||||||||||||||||| ||||||||    
T  17775 agggtctctgtaaatctataactttataaacaacttccattcctatgccaagatcaactcacaacatcacgtgcgacgaagatcgc 17860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 8226 - 8492
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||| | | |||||||||||||||||||| ||||||||||||||| | | |||||||| |||||||||||| | ||||||||||||||    
T  8226 ttacaacttagaccaaaaatagcaacttaatgacaataatggttcaacaacagcagaaacaacaacataaacatcttgcaacatagcaacatcaataata 8325  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||| |||||||    
T  8326 acaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaac-taaccaacaatcattaataatttgat 8424  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||  || || ||||||||||||    
T  8425 tcaggctctctgtaagtctataacttaat-aacaactttcattcctatcccaatatcaactcacaacat 8492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 19829839 - 19829601
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | | |||||    |||||||||||| | ||||||||||||||    
T  19829839 ttacaacttagaccaacacttgcaacttaatgaccataatggttcagcaacagcagaaacaacaacaa---catcttgcaacatagcaacatcaataata 19829743  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
     ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||    
T  19829742 tcaacttgaatgatataaacaataataatttctatatcatacattttcaacaccttatataaatatcttaaac-taaccaacaatcattaatcatttgat 19829644  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattc 248  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  19829643 tcaggctctctgtaagtctataacttaat-aacaacttccattc 19829601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 312
Target Start/End: Complemental strand, 24551168 - 24550864
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataata 104  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||  ||||||||||| | |||||||||||||     
T  24551168 ttacaacttaaaccaacacttgcaacttaatgactataatgattcatcaacagcagagacatcaacataaatatcttgcaacatagcaacatcaataat- 24551070  T
Q  105 acaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgat 204  Q
      |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |  ||||| ||||||||||||||||    
T  24551069 --aactagaatgatataaacaataataatttccatatcatacattttcaacacattatacaaatattttaaac-aattcaacagtcattaatcatttgat 24550973  T
Q  205 tcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    | ||| |||||||| | || |||||||||||  |||||||||  ||| |  ||||| ||||| |||||||| | ||||||||||||||||||||||| ||    
T  24550972 ttaggttctctgtatgcctgtaacttaataactaacttccatctctaccccaagatcaactctcaacatcatgcgcgacaaagatcgcaagaaccctaaa 24550873  T
Q  304 caaggttga 312  Q
    |||||||||    
T  24550872 caaggttga 24550864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 18658432 - 18658634
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| ||  |||||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||||||||||||  ||||| ||||||    
T  18658432 caacataagcaatttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttc--cacataatataa 18658529  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactc 266  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||  ||||| |||||    
T  18658530 atatcttaaact-agccaacaatcattaatcatttgattcaggctctctataagtctataactt-attaacaacttccattcctatcccaagatcaactc 18658627  T
Q  267 acaacat 273  Q
    |||||||    
T  18658628 acaacat 18658634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 610927 - 611168
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  610927 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 611025  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  | ||| |||||||||||||| || || | |||| ||||||||||||||||||||||||||||||||||||||    
T  611026 cgatattttctatatcatacattttc--ctcataatataaatatcttagac-taactaacaatcattaatcatttgattcaggctctctgtaagtctata 611122  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||| ||||||||||  ||||| ||||||||||||    
T  611123 actt-attaacaactttcattcctatcccaagatcaactcacaacat 611168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 29848370 - 29848129
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  29848370 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 29848272  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
     |||| |||| |||||| ||||||||  | ||| ||||||||||||||||| || | |||| |||||||| |||||||||||||||| ||||||||||||    
T  29848271 caatattttctatatcacacattttc--ctcataatataaatatcttaaac-taactaacaatcattaataatttgattcaggctctttgtaagtctata 29848175  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || ||||||||| |||||||||  ||||| ||||||||||||    
T  29848174 actt-attaacaacttctattcctatcccaagatcaactcacaacat 29848129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 22212394 - 22212254
Alignment:
Q  7 acaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataa 105  Q
    |||||||||||||||||||||||||| |||| |  ||| || |||||| |||||||  ||||||||||  || |||||||||||||||||||||||||||    
T  22212394 acaacttagaccaacacttgcaactttatgatataaataat-caacaaaagcagaggcagcaacataaaacaacttgcaacacaacaacatcaataataa 22212296  T
Q  106 caacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||||||| ||| | || |||| ||||||||||    
T  22212295 caacttgaatgatataaacaaaattattttctatatcataca 22212254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 31735808 - 31735664
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||||||||||| | |||| || ||||||||||||||| ||||||||||  || |||| |||| | |||||| |||||||||    
T  31735808 caacttagaccaacacttgcaacttaatgatattaataat-caacaacagcagagacagcaacataaaacaacttgtaacatagcaacattaataataac 31735710  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    || ||||||||||||| ||| |||| |||| |||||| ||||||||    
T  31735709 aatttgaatgatataaacaacaatattttctatatcaaacattttc 31735664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 13751219 - 13751082
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| | |||||||| || ||||||||| | ||| || |||||||||||||||||||| |||| |||    
T  13751219 caacttaatgatattaataat-caacaacagcagagacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgaaataaacaa 13751121  T
Q  127 taataatttccatatcatacattttcaacacattatata 165  Q
      ||| |||| ||||||||||||||| ||| | ||||||    
T  13751120 cgatattttctatatcatacattttccacataatatata 13751082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 24266952 - 24267075
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| ||||| || ||||| ||||||||||||||||||| |||    
T  24266952 caacttaatgatattaataat-caacaacaacagagacagcaacataagcaacttgcaacataacaatattaataacaacaacttgaatgatataaacaa 24267050  T
Q  127 taataatttccatatcatacatttt 151  Q
      | | |||  ||||||||||||||    
T  24267051 ggacattttttatatcatacatttt 24267075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 19444127 - 19444010
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||| ||||||  | |||||||||| || ||||||||| | ||| || ||||| ||||||||||||||||||| |||  ||| |||| ||||||||||    
T  19444127 tcaacagcagcagcaacagcaacataagcaacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgatattttctatatcataca 19444028  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  19444027 ttttccacataatatata 19444010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5110628 - 5110525
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||    
T  5110628 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaa 5110530  T
Q  127 taata 131  Q
     ||||    
T  5110529 caata 5110525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 24441112 - 24441206
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataa 122  Q
    ||||||||||| | |||| || ||||||||||||||| | |||||||| || ||||||||| | ||| || ||||||||||||||||||| |||||    
T  24441112 caacttaatgatattaataat-caacaacagcagagacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatggtataa 24441206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 16133517 - 16133400
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||  | |||||||||| ||  |||||||| | ||| || ||||| ||||||||||||||||||| |||  | | |||| ||||||||||    
T  16133517 tcaacaacagcagcaacagcaacataagcaaattgcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcataca 16133418  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  16133417 ttttccacataatatata 16133400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5289987 - 5289884
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| | ||||   ||||||||||||| ||||||||||| |||    
T  5289987 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacatagcaacggtaataataacaactcgaatgatataaacaa 5289889  T
Q  127 taata 131  Q
     ||||    
T  5289888 caata 5289884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 13764560 - 13764685
Alignment:
Q  51 acaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattt 150  Q
    |||||||||| || | |||||||| || || |||||| | ||| || ||||||||||||||||||||||||| |||  ||| |||| |||||| ||||||    
T  13764560 acaacagcagggacaacaacataagcaactagcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacattt 13764659  T
Q  151 tcaacacattatataaatatcttaaact 178  Q
     |  | ||| ||||||||| ||||||||    
T  13764660 cc--ctcataatataaataacttaaact 13764685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 20078044 - 20078003
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  20078044 aactcataacatctcgtgcgacaaagatcgcaagaaccctaa 20078003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 31735557 - 31735521
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaac 298  Q
    |||||| ||||||||||||||||||||||||||||||    
T  31735557 aactcagaacatcacgtgcgacaaagatcgcaagaac 31735521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 25738630 - 25738680
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||| |||||| | |||||||||||||||||||||||| ||||||||||    
T  25738630 aactcataacatctcatgcgacaaagatcgcaagaaccctaaacaaggttg 25738680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 22376547 - 22376506
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||||||  |||||||||||||||||||||||||||    
T  22376547 aactcataacatcttgtgcgacaaagatcgcaagaaccctaa 22376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 15896200 - 15896236
Alignment:
Q  276 cgtgcgacaaagatcgcaagaaccctaa-caaggttg 311  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15896200 cgtgcgacaaagatcgcaagaaccctaatcaaggttg 15896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 18260058 - 18260026
Alignment:
Q  3 acttacaacttagaccaacacttgcaacttaat 35  Q
    |||| ||||||||||||||||||||||||||||    
T  18260058 acttgcaacttagaccaacacttgcaacttaat 18260026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 153; Significance: 4e-81; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 273
Target Start/End: Original strand, 5583 - 5845
Alignment:
Q  9 aacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaa 108  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | | |||||||| |||||||||||| | ||||||||||||||||||    
T  5583 aacttagaccaacacttgcaatttaatgacaataatggttcaacaacagcagaaacaacaacataaacatcttgcaacatagcaacatcaataataacaa 5682  T
Q  109 cttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcag 208  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| || |||||| |||||||||||||||||||     
T  5683 cttgaattatataaacaataataatttctatatcatacattttcaacaccttataaaaatatcttaaac-taaccaacaatcattaatcatttgattcaa 5781  T
Q  209 gctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
     || ||||||||||||||||||||| ||||||||  |||| ||||  ||||| ||||||||||||    
T  5782 cctttctgtaagtctataacttaat-aacaacttatattcatatcccaagatcaactcacaacat 5845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 3396 - 3468
Alignment:
Q  232 ataaacaacttccattcctatcttaag-attaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||| |||| |||||||||| | |||| || |||||| |||||| || |||||||||||||||| ||||||||    
T  3396 ataatcaacctccattcctaccctaaggatcaactcataacatctcgggcgacaaagatcgcaaaaaccctaa 3468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 27 - 273
Target Start/End: Complemental strand, 159817 - 159574
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| |||| ||||| |||||||||||| | ||||||| |||||||||||||||||||||||| |||    
T  159817 caacttaatgatattaataat-caacaacagcagagacagcagcataaacatcttgcaacatagcaacatcgataataacaacttgaatgatataaacaa 159719  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||| ||||||| ||||||||||||    
T  159718 taataattttcatatcatacattttcaacacattatataaatatctcaaac-taaccaacaatcattaatcatttgatttaggctctgtgtaagtctata 159620  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||| ||||||||||  ||||| ||||| ||||||    
T  159619 actt-attaacaactttcattcctatcccaagatcaactctcaacat 159574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 20815 - 21069
Alignment:
Q  7 acaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataac 106  Q
    ||||||| ||||||||  |||||||||||||   |||| || ||| ||||||||| | | |||||||| |||||||||||| | ||||||||||||||||    
T  20815 acaactttgaccaacatatgcaacttaatgatt-taataat-caataacagcagaaacaacaacataaacatcttgcaacatagcaacatcaataataac 20912  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  20913 aacttgaatgatataaacaataataatttctatatcatacattttcaacacattatataaatatcttaaac-taaccaacaatcattaatcatttgattc 21011  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||||        ||||||||| |||||||| ||||||||||  ||||| ||||||||||||    
T  21012 aggctctctg--------taacttaat-aacaacttacattcctatcccaagataaactcacaacat 21069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 8 - 312
Target Start/End: Original strand, 3435 - 3741
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||  | ||||| | |||| || ||| ||||||||||| |  |||||||  || ||||||||| |   ||||  ||| ||||    
T  3435 caacttagaccaacacttgcatttaaatgatattaataat-caataacagcagagacaaaaacataaagcaacttgcaacatagtcacattgatactaac 3533  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||| |   ||||||||||| ||||| | |||| ||||||||||||||||||||    
T  3534 aacttggatgatataaacaataacaatttccatatcatacattttcaacataaagtataaatatctcaaactaa-ccaaaactcattaatcatttgattc 3632  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctat--cttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccct-aa 303  Q
    ||| ||||||||| |||||||||||||||||||||| |||||||||  |  ||||| |||||||||||||||||||||||||||| ||||||| ||| ||    
T  3633 agggtctctgtaaatctataacttaataaacaactttcattcctatcgcgcaagatcaactcacaacatcacgtgcgacaaagattgcaagaatcctaaa 3732  T
Q  304 caaggttga 312  Q
    |||||||||    
T  3733 caaggttga 3741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 67 - 252
Target Start/End: Original strand, 12558 - 12741
Alignment:
Q  67 caacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataa 166  Q
    |||||||| |||||||||||| | ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12558 caacataaacatcttgcaacatatcaacatcgataataataacttgaatgatataaacaataataatttccatatcatacattttcaacacattatataa 12657  T
Q  167 atatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctat 252  Q
    |||||| |||| || |||||| ||||||||||||||||| ||||| |||||||||||||||||| || ||||| || |||||||||    
T  12658 atatctcaaac-taaccaacaatcattaatcatttgatttaggctatctgtaagtctataactt-attaacaattttcattcctat 12741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 48 - 273
Target Start/End: Original strand, 6006 - 6227
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||| ||| | |||||||||| || ||||||||| |  || || ||||||||||||||||||||||  | |||  ||| |||| |||||| |||    
T  6006 tcaacaacagtagaaacagcaacataagcaacttgcaacatagaaatattaataataacaacttgaatgataataacaacgatattttctatatcacaca 6105  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    |||||  ||||| |||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  6106 ttttc--cacataatataaatatcttaaactaa-ccaacaatcattaatcatttgattcaagctctctgtaagtctataacttaat-aacaacttccatt 6201  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  6202 cctatcccaagatcaactcacaacat 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 122 - 273
Target Start/End: Complemental strand, 36344 - 36195
Alignment:
Q  122 agcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||| |||||||||||||||    
T  36344 agcaataataatttccatatcatacattttcaacacattatataaatatctcaaac-taaccaacaatcattaatcatttgatttaggctctctgtaagt 36246  T
Q  222 ctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    ||||||||| || |||||||| ||||||||||  ||||| ||||| ||||||    
T  36245 ctataactt-attaacaactttcattcctatcccaagatcaactctcaacat 36195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 36427 - 36346
Alignment:
Q  6 tacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaaca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||    
T  36427 tacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagaaacagcaacataaacatcttgcaaca 36346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 48 - 273
Target Start/End: Original strand, 8264 - 8485
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||| || |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||  | |||  ||| |||| ||||||||||    
T  8264 tcaacaacagcagggacagcaacataagcaacttgcaacatatcaatattaataataacaacttgaatgataataacaacgatattttctatatcataca 8363  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    |||||  ||||| ||||||||||||||||| || || ||| ||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||    
T  8364 ttttc--cacataatataaatatcttaaac-taaccgacaatcattaatcatttgatttaggctctctgtaagtctataactt-attaacaacgtccatt 8459  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    | ||||  ||||| ||||||||||||    
T  8460 catatcccaagatcaactcacaacat 8485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 2893 - 3134
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| |  || || ||||||||||||||||||||||||| |||    
T  2893 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagtaatattaataataacaacttgaatgatataaacaa 2991  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctata 226  Q
      ||| |||| |||||||||||||||  | ||| ||||||||||||||||| || | |||| ||||||||||||||||||||||||| ||||||||||||    
T  2992 cgatattttctatatcatacattttc--ctcataatataaatatcttaaac-taactaacaatcattaatcatttgattcaggctctttgtaagtctata 3088  T
Q  227 acttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||| || |||||||||||||| ||||  ||||| ||||| ||||||    
T  3089 actt-attaacaacttccattcatatcccaagatcaactcgcaacat 3134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 273
Target Start/End: Complemental strand, 1629 - 1439
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaact 178  Q
    ||||||||| | ||| || ||||||||||||||||||||||  | |||  ||| |||| |||||| ||||||||  ||||| ||||||||||||||||||    
T  1629 cttgcaacatatcaatattaataataacaacttgaatgataataacaacgatattttctatatcaaacattttc--cacataatataaatatcttaaact 1532  T
Q  179 tagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
     | |||| | |||||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||  ||||| ||||||||||||    
T  1531 aa-ccaataatcattaatcatttgattcaggctctctgtaagtctaaaactt-attaacaactttcattcctatcccaagatcaactcacaacat 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 273
Target Start/End: Original strand, 51165 - 51386
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||| | | |||||||| || ||||||||| | ||| || |||| ||| ||||| |||||||  | | |  ||| |||  |||||| |||    
T  51165 tcaacaacagcagaaacaacaacataagcaacttgcaacatagcaatattaatagtaataacttaaatgataataactacgatattttttatatcaaaca 51264  T
Q  148 ttttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccatt 247  Q
    ||||   ||||| |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  51265 ttttg--cacataatataaatatcttaaactaa-ccaacaatcattaatcatttgattcaggctctctgtaagtctataactt-attaacatcttccatt 51360  T
Q  248 cctatcttaagattaactcacaacat 273  Q
    ||||||  ||||| ||||||||||||    
T  51361 cctatcccaagatcaactcacaacat 51386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 28446 - 28590
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    |||||||||||||||||||||||| |||||   |||| || ||| ||||||||||||||||||||||  || |||||| || |   |||| |||||||||    
T  28446 caacttagaccaacacttgcaactaaatgatgttaataat-caataacagcagagatagcaacataaaacaacttgcagcatagtcacattaataataac 28544  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
    |||||||||||||||| ||| | || ||||  |||||||||||||||    
T  28545 aacttgaatgatataa-caacattagtttctgtatcatacattttca 28590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 3055 - 3183
Alignment:
Q  184 aacactcattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacatcacgtgcgac 283  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||  ||| | |||||||||||||| |||||||    
T  3055 aacaatcattaatcatttgattcaggctctatgtaaatctataactcagtaa-caacttccatttctatcccaaggtcaactcacaacatcatgtgcgac 3153  T
Q  284 aaagatcgcaagaaccct-aacaaggttga 312  Q
    |||||||||||||||||| |||||||||||    
T  3154 aaagatcgcaagaaccctaaacaaggttga 3183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 303
Target Start/End: Original strand, 66181 - 66470
Alignment:
Q  10 acttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaac 109  Q
    |||| |||||| |||||||||||||||| | |||| || ||||||||||| ||| | |||||| | || ||||||||| |||||||| ||||||||||||    
T  66181 actttgaccaatacttgcaacttaatgatattaataat-caacaacagcaaagacaacaacatcaacaacttgcaacataacaacattaataataacaac 66279  T
Q  110 ttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat-ttgattcag 208  Q
    || |||||||| | ||| ||| ||||| |||||||||| ||||  ||||| |||||  ||||| ||| ||| ||||||  || ||||||| || ||||||    
T  66280 tttaatgatatgaacaacaat-atttctatatcatacaatttc--cacatcatatatgtatctcaaa-ttaaccaaca-acaataatcatattaattcag 66374  T
Q  209 gctctctgtaagtctataacttaataaacaacttccattccta-tcttaagattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     ||| ||| |||  ||||  || ||||||||||| ||||||||  |  ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  66375 actcactgaaagattatacttttataaacaactttcattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacactaa 66470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 2818 - 2524
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatca-ataataac 106  Q
    |||||| |||||| ||||||||||||||||   |||| || |||||||||||  || | |||||||| || ||||||||| | ||||| |  ||||||||    
T  2818 caactttgaccaaaacttgcaacttaatgaatttaataat-caacaacagcaaggacatcaacataaacaacttgcaacatagcaacaactgataataac 2720  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttga-tt 205  Q
     | ||||||||||| | ||| |||| |||| |||||||||| ||||  ||||| |||||  ||||| ||| ||| |||||| |||||||| |||| | ||    
T  2719 gatttgaatgatatgaacaacaatattttctatatcatacaatttc--cacataatatatgtatctcaaaattaaccaaca-tcattaatgattttaatt 2623  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattcctatctta-agattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    ||| ||||||| ||| ||||| ||| ||||||||||||||||| || | || |||  |||||  |||||||| ||||||||||||||||||||| ||||    
T  2622 cagactctctgaaaggctatacctttataaacaacttccattcataccctacagaccaactcgtaacatcacatgcgacaaagatcgcaagaactctaa 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 109325 - 109624
Alignment:
Q  1 caacttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcaga-gatagcaacataaccatcttgcaacacaacaacatca- 98  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| || |||||||| || | || |||||||| | || ||| ||||| | ||||| |      
T  109325 caacttacaactttgaccaacacttgcaacttaatgatattaataat-caacaacaacaaaagacagcaacatcaacaacttacaacata-caacaactg 109422  T
Q  99 ataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca 198  Q
    |||||||||||||||||||||| | || ||||| | || | |||||||| ||||  ||||| |||||  ||||| ||| ||| ||||||  |||||||||    
T  109423 ataataacaacttgaatgatatgaacattaata-tctctacatcatacaatttc--cacataatatatgtatctcaaa-ttaaccaacaa-cattaatca 109517  T
Q  199 tttga-ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaaga 296  Q
    ||| | ||||| ||||||||||| ||||| ||| |||||||||||||||| ||| |  || |   |||||| ||||||||||| ||||||||||||||||    
T  109518 ttttaattcagactctctgtaaggctatacctttataaacaacttccatttctaccccaaaggccaactcataacatcacgtgtgacaaagatcgcaaga 109617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 59550 - 59654
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||  | | |||||||| || ||||||||| |||||| | ||||||||||||| |||||||||||  || |||| |||| ||||||||||    
T  59550 tcaacaacagcaggaacaacaacataaacaacttgcaacataacaacgttaataataacaactcgaatgatataaaaaacaatattttctatatcataca 59649  T
Q  148 ttttc 152  Q
    |||||    
T  59650 ttttc 59654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 6807 - 6931
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| |||||||||| || ||||||||| | |||||| |||||||||||||  |||||||||| |||    
T  6807 caacttaatgatattaataat-caacaacagcagagacagcaacataagcaacttgcaacatagcaacattaataataacaactcaaatgatataaacaa 6905  T
Q  127 taataatttccatatcatacattttc 152  Q
     |||| |||| |||||||||||||||    
T  6906 caatattttctatatcatacattttc 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 502 - 379
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  502 caacttaatgatattaataat-caacaacagcagagacagcaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaa 404  T
Q  127 taataatttccatatcatacatttt 151  Q
      ||| |||| ||||||||||||||    
T  403 cgatactttctatatcatacatttt 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 2835 - 2718
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||| ||||| |||||||||| || ||||||||| | ||| || || |||||||||||||||||||||| |||| ||| |||| ||||||||||    
T  2835 tcaacaacagtagagacagcaacataagcaacttgcaacatagcaatattaaaaataacaacttgaatgatataaacaatgatattttctatatcataca 2736  T
Q  148 ttttcaacacattatata 165  Q
    ||||| ||| | ||||||    
T  2735 ttttccacataatatata 2718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 41090 - 40966
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || |||||||||| || ||||||||| | ||| || ||||||||||||||||||||||||| |||    
T  41090 caacttaatgatattaataat-caacaacagcagtgacagcaacataagcaacttgcaacatatcaatattaataataacaacttgaatgatataaacaa 40992  T
Q  127 taataatttccatatcatacattttc 152  Q
      ||| |||| |||||||||||||||    
T  40991 cgatactttctatatcatacattttc 40966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 824 - 676
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||| |||||||| || || ||| ||||| | |||| | |||||     
T  824 ttacaacttagaccaacacttgcaaattaatgatattaatgcttcaacaacagcagagagagcaacataaaacaacttccaacatagcaacgttaataac 725  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
     |||||||| ||||||||| ||| | || |||| ||||||||| ||||||    
T  724 tacaacttggatgatataa-caacattattttctatatcataccttttca 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 6128 - 5980
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataat 103  Q
    ||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||| |||||||| || || ||| ||||| | |||| | |||||     
T  6128 ttacaacttagaccaacacttgcaaattaatgatattaatgcttcaacaacagcagagagagcaacataaaacaacttccaacatagcaacgttaataac 6029  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttca 153  Q
     |||||||| ||||||||| ||| | || |||| ||||||||| ||||||    
T  6028 tacaacttggatgatataa-caacattattttctatatcataccttttca 5980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 11591 - 11526
Alignment:
Q  9 aacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataa 74  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| | ||||||||    
T  11591 aacttagaccaacacttgcaacttaatgatattaatgcttcaacaacagcagagacaacaacataa 11526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 5031 - 5135
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| | |||||||| || ||||||||| | ||| || |||||||| |||||||||||||||| ||| |||| |||| ||||||||||    
T  5031 tcaacaacagcagagacaacaacataagcaacttgcaacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcataca 5130  T
Q  148 ttttc 152  Q
    |||||    
T  5131 ttttc 5135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 6113 - 6217
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| | |||||||| || ||||||||| | ||| || |||||||| |||||||||||||||| ||| |||| |||| ||||||||||    
T  6113 tcaacaacagcagagacaacaacataaacaacttgcaacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcataca 6212  T
Q  148 ttttc 152  Q
    |||||    
T  6213 ttttc 6217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 8265 - 8369
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| | |||||||| || ||||||||| | ||| || |||||||| |||||||||||||||| ||| |||| |||| ||||||||||    
T  8265 tcaacaacagcagagacaacaacataaacaacttgcaacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcataca 8364  T
Q  148 ttttc 152  Q
    |||||    
T  8365 ttttc 8369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 127302 - 127010
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacat-aaccatcttgcaacacaacaacatcaataataac 106  Q
    ||||||||||||||||||| |||||||||| | |||| |||||||||||||||||| | |||||| || || ||||||||| | |||| | ||||| |||    
T  127302 caacttagaccaacacttgtaacttaatgatattaataattcaacaacagcagagacaacaacataaaacagcttgcaacatagcaactttaataacaac 127203  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatca-tttgatt 205  Q
    |||||| |||||||||  || | || ||||| |||||||| |||    ||||| |||||  ||| || |  ||| ||||||  ||||||||| ||| |||    
T  127202 aacttggatgatataa-taacattattttccctatcataccttt---ccacataatatatgtat-ttcacattaaccaaca-acattaatcattttaatt 127109  T
Q  206 caggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
     ||  |||||| ||| ||| | ||| |||||||||||||||||||| |  || ||  |||||| ||||||||||||||||||||||||| |||| ||||    
T  127108 tagattctctgaaaggctaaacctttataaacaacttccattcctaccgcaaggaccaactcataacatcacgtgcgacaaagatcgcaggaacactaa 127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 273
Target Start/End: Original strand, 77033 - 77115
Alignment:
Q  190 cattaatcatttgattcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcacaacat 273  Q
    |||||||||||||||||||| | ||||||||||||||||||||| ||||||||| |||||||||  ||||| ||||||||||||    
T  77033 cattaatcatttgattcaggttatctgtaagtctataacttaat-aacaacttctattcctatcccaagatcaactcacaacat 77115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 162969 - 162921
Alignment:
Q  264 ctcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    ||||||||||| |||||||||| |||||||| |||||| ||||||||||    
T  162969 ctcacaacatctcgtgcgacaaggatcgcaaaaaccctaaacaaggttg 162921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 297 - 434
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| | |||||||| || ||||||||| | ||| || |||||||||||||||||||| |||| |||    
T  297 caacttaatgatattaataat-caacaacagcagagacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgaaataaacaa 395  T
Q  127 taataatttccatatcatacattttcaacacattatata 165  Q
      ||| |||| ||||||||||||||| ||| | ||||||    
T  396 cgatattttctatatcatacattttccacataatatata 434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 60422 - 60573
Alignment:
Q  5 ttacaacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataat 103  Q
    |||||||||||||||||||||||||   ||||| | || | | |||| ||||||||||| ||||||||||  || ||| || || | | | || |||| |    
T  60422 ttacaacttagaccaacacttgcaataaaatgatattattaaatcaataacagcagagacagcaacataaagcaacttacatcatagccagattaatact 60521  T
Q  104 aacaacttgaatgatataagcaataataatttccatatcatacattttcaac 155  Q
    ||||||||| ||||||||| || ||| |||||||||||||||||||||||||    
T  60522 aacaacttggatgatataaacactaacaatttccatatcatacattttcaac 60573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 3242 - 3346
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||||||||||||||| | |||||||| || ||||||||| | ||| || || |||||||||||||||| ||||| |||  ||| |||| ||||||||||    
T  3242 tcaacaacagcagagacaacaacataaacaacttgcaacatagcaatattaacaataacaacttgaatgttataaacaacgatattttctatatcataca 3341  T
Q  148 ttttc 152  Q
    |||||    
T  3342 ttttc 3346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 1394 - 1272
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||| ||||| |||||||||| || ||| ||||| | ||| || ||||||||||||||||||||||||| |||    
T  1394 caacttaatgatattaataat-caacaacagtagagacagcaacataagcaacttacaacatagcaatattaataataacaacttgaatgatataaacaa 1296  T
Q  127 taataatttccatatcatacattt 150  Q
      ||| |||  |||||||||||||    
T  1295 cgatattttatatatcatacattt 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 303
Target Start/End: Original strand, 394 - 686
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    ||||||||||| |||||||||||||| ||| | |||| || ||  ||||| ||||| | ||||||||  || ||| ||||  | |||||| |||||||||    
T  394 caacttagaccgacacttgcaacttagtgatattaataat-cagtaacagtagagacaacaacataaaacaacttacaacgtagcaacatgaataataac 492  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    |||||  ||||||||  |||||||| |||| |||||||||||||||  ||||| |||||  || || ||| ||| ||||||  |||||||||||| ||||    
T  493 aacttagatgatatacacaataatattttctatatcatacattttc--cacataatatatgtagctcaaattta-ccaacaa-cattaatcatttaattc 588  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |  ||| ||| |   |  ||   | ||||||||||| ||||| ||||  || ||  |||||| |||||||||||||||||||||||||||||||||||    
T  589 aaactcactgaaccacagtataattataaacaactttcattcttatcccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaaccctaa 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 303
Target Start/End: Original strand, 8649 - 8941
Alignment:
Q  8 caacttagaccaacacttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataac-catcttgcaacacaacaacatcaataataac 106  Q
    ||||||||||| |||||||||||||| ||| | |||| || ||  ||||| ||||| | ||||||||  || ||| ||||  | |||||| |||||||||    
T  8649 caacttagaccgacacttgcaacttagtgatattaataat-cagtaacagtagagacaacaacataaaacaacttacaacgtagcaacatgaataataac 8747  T
Q  107 aacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcatttgattc 206  Q
    |||||  ||||||||  |||||||| |||| |||||||||||||||  ||||| |||||  || || ||| ||| ||||||  |||||||||||| ||||    
T  8748 aacttagatgatatacacaataatattttctatatcatacattttc--cacataatatatgtagctcaaattta-ccaacaa-cattaatcatttaattc 8843  T
Q  207 aggctctctgtaagtctataacttaataaacaacttccattcctatcttaa-gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |  ||| ||| |   |  ||   | ||||||||||| ||||| ||||  || ||  |||||| |||||||||||||||||||||||||||||||||||    
T  8844 aaactcactgaaccacagtataattataaacaactttcattcttatcccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaaccctaa 8941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 30436 - 30486
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30436 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttg 30486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 3810 - 3642
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| | ||| || | |||||||||||| |||||||||| |||    
T  3810 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagcaatattagtaataacaacttaaatgatataaacaa 3712  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaacttagccaacactcattaatcat 199  Q
      ||| |||| |||||| |||||| |  | ||| ||||||||||||||||| || | |||| |||||||||||    
T  3711 cgatattttctatatcacacatttcc--ctcataatataaatatcttaaac-taactaacaatcattaatcat 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 237 - 134
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||| |||||| |||||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||| |||    
T  237 caacttaatgatattaataat-caacaacaacagagacagcaacataaacaacttgcaacatagcaacgttaataataacaactcgaatgatataaacaa 139  T
Q  127 taata 131  Q
     ||||    
T  138 caata 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 34216 - 34132
Alignment:
Q  68 aacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||| || || |||||| | |||||| ||||||||||||||||||||||||| ||| ||||  ||| |||||||||||||||    
T  34216 aacataaacaactagcaacatagcaacattaataataacaacttgaatgatataaacaacaatatcttctatatcatacattttc 34132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 12375 - 12227
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || |||||||||||| || | |||||||| || ||||||||| | ||| || ||||||||||| ||||||||||||| |||    
T  12375 caacttaatgatattaataat-caacaacagcagggacaacaacataagcaacttgcaacatagcaatattaataataacaatttgaatgatataaacaa 12277  T
Q  127 taataatttccatatcatacattttcaacacattatataaatatcttaaact 178  Q
      ||| |||| |||||| |||||| |  | ||| |||||||||| |||||||    
T  12276 cgatattttctatatcacacatttcc--ctcataatataaatattttaaact 12227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 136251 - 136210
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  136251 aactcagaacatcacgtgcgacaaagatcgcaagaacactaa 136210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 136487 - 136364
Alignment:
Q  22 acttgcaacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatata 121  Q
    |||||||||||||||| | |||| || |||||||||||  || | |||||    || ||||||||| || ||||| ||||| |||||||||||||||||     
T  136487 acttgcaacttaatgatattaataat-caacaacagcaatgacaacaacaatgacaacttgcaacataataacattaataacaacaacttgaatgatatg 136389  T
Q  122 agcaataataatttccatatcataca 147  Q
    | ||| ||| ||||| ||||||||||    
T  136388 aacaacaat-atttctatatcataca 136364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 10883 - 10957
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataa 122  Q
    |||||||||||||||| | |||||||  || ||||||||| |  ||||| |||||||||||||||||||||||||    
T  10883 tcaacaacagcagagacaacaacatagacaacttgcaacatagaaacattaataataacaacttgaatgatataa 10957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 3065 - 3189
Alignment:
Q  27 caacttaatgacaataatgattcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaa 126  Q
    ||||||||||| | |||| || ||||||||||||||| | |||  ||| || ||||||||| | ||| || ||||| ||||||||||||||||||| |||    
T  3065 caacttaatgatattaataat-caacaacagcagagacatcaatttaagcaacttgcaacatagcaatattaataacaacaacttgaatgatataaacaa 3163  T
Q  127 taataatttccatatcatacattttc 152  Q
      | | |||| |||||||||||||||    
T  3164 cgacattttctatatcatacattttc 3189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 95542 - 95587
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatca 143  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  95542 aataataacatcttgaatgatataagcaataataatttctatatca 95587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 95715 - 95755
Alignment:
Q  273 tcacgtgcgacaaagatcgcaagaaccct-aacaaggttga 312  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  95715 tcacgtgcgacaatgatcgcaagaaccctaaacaaggttga 95755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 2092 - 1996
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcatacattttcaacacattatataaatatcttaa 175  Q
    ||||||||| | ||| || ||||||||||||||||||||||  | |||  ||| |||| || |||||||||||| ||| |||||||||||| |||||    
T  2092 cttgcaacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacatattatataaatagcttaa 1996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 1298 - 1347
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaacaaggttg 311  Q
    |||||| |||||| ||| |||||| |||||||||||||||||||||||||    
T  1298 aactcataacatctcgtacgacaacgatcgcaagaaccctaacaaggttg 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 7244 - 7308
Alignment:
Q  204 ttcaggctctctgtaagtctataacttaataaacaacttccattcctatcttaagattaactcaca 269  Q
    |||||| |||||||||||||||||||| || |||||||||||||| ||||  ||||| ||||||||    
T  7244 ttcaggttctctgtaagtctataactt-attaacaacttccattcatatcccaagatcaactcaca 7308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 8431 - 8472
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  8431 aactcacatcatctcgtgcgacaaagatcgcaagaaccctaa 8472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 774 - 872
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || |||||||  | || |||||| || |||||||| || |  ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  774 tcaacaacagcaatgacagcaacaataacaacttgcatcataacaacattaacaggaacaacttgaatgatataaacaataat-atttctatatcataca 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 995 - 1036
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatat 120  Q
    ||||||||| ||||||||||| || |||||||||||||||||    
T  995 cttgcaacataacaacatcaacaacaacaacttgaatgatat 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 56857 - 56888
Alignment:
Q  1 caacttacaacttagaccaacacttgcaactt 32  Q
    ||||||||||||||||||||||||||||||||    
T  56857 caacttacaacttagaccaacacttgcaactt 56888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 187494 - 187396
Alignment:
Q  48 tcaacaacagcagagatagcaacataaccatcttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    ||||||||||||  || |||||||  | || |||||| || |||||||| || |  ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  187494 tcaacaacagcaatgacagcaacaataacaacttgcatcataacaacattaacaggaacaacttgaatgatataaacaataat-atttctatatcataca 187396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 187273 - 187232
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatat 120  Q
    ||||||||| ||||||||||| || |||||||||||||||||    
T  187273 cttgcaacataacaacatcaacaacaacaacttgaatgatat 187232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 211 - 158
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||||||||||||| ||| | || |||| |||||||||||||||    
T  211 aataataacaacttgaatgatataa-caacattattttctatatcatacattttc 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 9093 - 9040
Alignment:
Q  98 aataataacaacttgaatgatataagcaataataatttccatatcatacattttc 152  Q
    ||||||||||||||||||||||||| ||| | || |||| |||||||||||||||    
T  9093 aataataacaacttgaatgatataa-caacattattttctatatcatacattttc 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 10402 - 10443
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||||||||||| ||||||||||||    
T  10402 aactcataacctcacgtgcgacaaagatcacaagaaccctaa 10443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17753 - 17794
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| |||||| ||||||||||||||||||||||| ||||    
T  17753 aactcataacatctcgtgcgacaaagatcgcaagaactctaa 17794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 8374 - 8418
Alignment:
Q  258 gattaactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||    
T  8374 gattaactcataacatctcgtgcgacaaagatcgcaa-aaccctaa 8418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 20658 - 20617
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||||||| |||||||||||||||||||||| ||||    
T  20658 aactcagaacatcatgtgcgacaaagatcgcaagaacactaa 20617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 3722 - 3681
Alignment:
Q  262 aactcacaacatcacgtgcgacaaagatcgcaagaaccctaa 303  Q
    |||||| ||| |||||||||||||||||||||||||| ||||    
T  3722 aactcagaacgtcacgtgcgacaaagatcgcaagaacactaa 3681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 600 - 667
Alignment:
Q  79 cttgcaacacaacaacatcaataataacaacttgaatgatataagcaataataatttccatatcataca 147  Q
    |||| |||| ||||||||||| || ||||||||||||||||| | ||| ||| ||||| ||||||||||    
T  600 cttgtaacataacaacatcaacaacaacaacttgaatgatatgaacaacaat-atttctatatcataca 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1551 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1551
Description:

Target: scaffold1551; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 106 - 142
Alignment:
Q  276 cgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||||||||||||||||||||||| ||||||||||    
T  106 cgtgcgacaaagatcgcaagaaccctaaacaaggttg 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 4152 - 4112
Alignment:
Q  273 tcacgtgcgacaaagatcgcaagaaccct-aacaaggttga 312  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  4152 tcacgtgcgacaaagatcgcaagaacactaaacaaggttga 4112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 8712 - 8672
Alignment:
Q  273 tcacgtgcgacaaagatcgcaagaaccct-aacaaggttga 312  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  8712 tcacgtgcgacaaagatcgcaagaacactaaacaaggttga 8672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 311
Target Start/End: Complemental strand, 14468 - 14432
Alignment:
Q  276 cgtgcgacaaagatcgcaagaaccct-aacaaggttg 311  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14468 cgtgcgacaaagatcgcaagaaccctaaacaaggttg 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 19520 - 19484
Alignment:
Q  258 gattaactcacaacatcacgtgcgacaaagatcgcaa 294  Q
    |||||||||| |||||| |||||||||||||||||||    
T  19520 gattaactcataacatctcgtgcgacaaagatcgcaa 19484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University