View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8890_low_68 (Length: 296)

Name: NF8890_low_68
Description: NF8890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8890_low_68
NF8890_low_68
[»] chr4 (45 HSPs)
chr4 (1-283)||(20031696-20031978)
chr4 (78-247)||(35571550-35571718)
chr4 (80-222)||(52315118-52315259)
chr4 (148-251)||(1407935-1408038)
chr4 (148-259)||(17822854-17822964)
chr4 (73-222)||(24169271-24169419)
chr4 (188-248)||(32421087-32421147)
chr4 (129-216)||(25904193-25904279)
chr4 (148-222)||(55414409-55414482)
chr4 (78-251)||(27043749-27043921)
chr4 (178-243)||(29601026-29601091)
chr4 (178-251)||(51630090-51630163)
chr4 (178-222)||(825508-825552)
chr4 (114-214)||(13126531-13126630)
chr4 (178-265)||(40174527-40174615)
chr4 (78-222)||(54426051-54426194)
chr4 (160-203)||(2703053-2703096)
chr4 (178-265)||(30207589-30207676)
chr4 (178-260)||(50004162-50004245)
chr4 (148-251)||(52746830-52746931)
chr4 (148-231)||(55302248-55302330)
chr4 (181-251)||(437453-437523)
chr4 (169-235)||(6364144-6364209)
chr4 (189-251)||(50298506-50298568)
chr4 (178-251)||(47118983-47119056)
chr4 (148-248)||(1706604-1706703)
chr4 (129-249)||(2996554-2996672)
chr4 (181-245)||(36048518-36048582)
chr4 (169-243)||(9841053-9841125)
chr4 (177-232)||(16199998-16200053)
chr4 (73-232)||(21731570-21731728)
chr4 (178-245)||(44319934-44320001)
chr4 (78-216)||(2244065-2244202)
chr4 (178-248)||(8468930-8469000)
chr4 (114-251)||(25332753-25332890)
chr4 (179-241)||(25548548-25548610)
chr4 (74-222)||(39603086-39603232)
chr4 (208-249)||(3175932-3175973)
chr4 (178-251)||(17884047-17884120)
chr4 (148-245)||(21157753-21157848)
chr4 (178-251)||(26883974-26884047)
chr4 (154-251)||(42685403-42685498)
chr4 (178-251)||(53294132-53294205)
chr4 (129-251)||(55064812-55064935)
chr4 (178-230)||(47800623-47800675)
[»] chr5 (42 HSPs)
chr5 (148-251)||(39105443-39105545)
chr5 (73-259)||(10639924-10640109)
chr5 (148-251)||(9202737-9202839)
chr5 (77-240)||(41419310-41419471)
chr5 (148-251)||(41957441-41957542)
chr5 (93-234)||(7984965-7985105)
chr5 (77-242)||(41534429-41534590)
chr5 (178-251)||(12425550-12425623)
chr5 (78-251)||(16937802-16937974)
chr5 (179-251)||(7319385-7319457)
chr5 (164-229)||(4014429-4014493)
chr5 (178-243)||(6183431-6183496)
chr5 (148-229)||(6096546-6096628)
chr5 (148-248)||(6587097-6587195)
chr5 (73-260)||(39594777-39594963)
chr5 (152-235)||(42100306-42100388)
chr5 (148-283)||(7674600-7674728)
chr5 (193-259)||(12975318-12975384)
chr5 (178-259)||(10272449-10272530)
chr5 (149-202)||(42099862-42099914)
chr5 (164-244)||(37588365-37588444)
chr5 (148-230)||(3280704-3280785)
chr5 (73-216)||(7705912-7706054)
chr5 (189-232)||(32942616-32942659)
chr5 (196-235)||(41016572-41016611)
chr5 (178-249)||(42569739-42569810)
chr5 (178-232)||(6593297-6593351)
chr5 (129-195)||(7808540-7808605)
chr5 (178-251)||(10363729-10363803)
chr5 (178-249)||(19138735-19138808)
chr5 (155-245)||(28776978-28777067)
chr5 (130-232)||(29925839-29925940)
chr5 (73-215)||(43300893-43301034)
chr5 (181-222)||(7319029-7319070)
chr5 (148-249)||(16380561-16380660)
chr5 (115-260)||(16457935-16458079)
chr5 (178-251)||(42582891-42582964)
chr5 (79-203)||(9107117-9107240)
chr5 (199-259)||(15246804-15246864)
chr5 (178-234)||(15402847-15402903)
chr5 (178-246)||(32172637-32172705)
chr5 (164-244)||(37526204-37526283)
[»] chr1 (55 HSPs)
chr1 (84-222)||(49938755-49938892)
chr1 (130-231)||(10744300-10744399)
chr1 (148-260)||(51695484-51695595)
chr1 (148-259)||(836328-836438)
chr1 (78-221)||(14576573-14576714)
chr1 (148-251)||(24915040-24915142)
chr1 (85-231)||(6102153-6102297)
chr1 (129-251)||(31517711-31517831)
chr1 (120-222)||(41195155-41195255)
chr1 (178-248)||(49888749-49888819)
chr1 (78-251)||(3233934-3234106)
chr1 (178-231)||(7137016-7137069)
chr1 (128-249)||(7218044-7218163)
chr1 (152-221)||(10199402-10199469)
chr1 (178-235)||(34290231-34290288)
chr1 (154-254)||(7069277-7069376)
chr1 (78-221)||(2295105-2295247)
chr1 (77-230)||(6292493-6292644)
chr1 (78-221)||(7941615-7941757)
chr1 (178-249)||(25479562-25479633)
chr1 (108-254)||(27970243-27970389)
chr1 (160-235)||(45975685-45975759)
chr1 (169-235)||(35179134-35179199)
chr1 (114-203)||(3887587-3887675)
chr1 (178-251)||(7472290-7472363)
chr1 (178-235)||(26946465-26946522)
chr1 (178-251)||(34952194-34952267)
chr1 (148-213)||(38503454-38503518)
chr1 (181-241)||(3224412-3224472)
chr1 (129-221)||(5720934-5721025)
chr1 (177-221)||(5741615-5741659)
chr1 (209-249)||(49517051-49517091)
chr1 (178-237)||(10809338-10809397)
chr1 (129-196)||(11941296-11941362)
chr1 (208-255)||(15579457-15579504)
chr1 (194-249)||(25006068-25006123)
chr1 (128-203)||(37473430-37473504)
chr1 (177-251)||(473143-473217)
chr1 (169-243)||(4622080-4622153)
chr1 (188-250)||(5591994-5592056)
chr1 (148-222)||(11639406-11639478)
chr1 (154-220)||(37593680-37593744)
chr1 (148-250)||(37631548-37631649)
chr1 (78-200)||(47498759-47498879)
chr1 (178-235)||(2777887-2777944)
chr1 (178-243)||(23902085-23902150)
chr1 (178-235)||(37842373-37842430)
chr1 (151-232)||(42174853-42174933)
chr1 (148-249)||(51929528-51929628)
chr1 (178-222)||(12564517-12564561)
chr1 (148-216)||(15477579-15477646)
chr1 (154-230)||(15784329-15784404)
chr1 (178-242)||(25944420-25944484)
chr1 (178-222)||(28077087-28077131)
chr1 (191-251)||(37295749-37295809)
[»] chr6 (26 HSPs)
chr6 (131-251)||(9093528-9093647)
chr6 (178-251)||(837234-837307)
chr6 (178-232)||(835267-835321)
chr6 (199-283)||(11784069-11784153)
chr6 (148-260)||(34430450-34430561)
chr6 (148-235)||(31624085-31624170)
chr6 (178-251)||(31671092-31671165)
chr6 (148-222)||(9763568-9763641)
chr6 (178-251)||(836559-836632)
chr6 (128-245)||(1275134-1275250)
chr6 (198-251)||(24476581-24476634)
chr6 (178-246)||(281866-281934)
chr6 (151-203)||(9912183-9912234)
chr6 (148-231)||(2735068-2735150)
chr6 (178-265)||(8364994-8365081)
chr6 (149-232)||(24982703-24982785)
chr6 (148-235)||(34910398-34910484)
chr6 (177-215)||(160969-161007)
chr6 (152-222)||(6647395-6647463)
chr6 (153-235)||(9109245-9109326)
chr6 (207-245)||(30533774-30533812)
chr6 (169-245)||(4246395-4246470)
chr6 (131-235)||(28641722-28641824)
chr6 (78-162)||(31623617-31623701)
chr6 (178-230)||(31624959-31625011)
chr6 (183-259)||(32143913-32143989)
[»] chr2 (61 HSPs)
chr2 (114-230)||(40682350-40682464)
chr2 (148-251)||(18066107-18066209)
chr2 (80-231)||(9174814-9174964)
chr2 (152-251)||(26626852-26626950)
chr2 (164-249)||(22681190-22681274)
chr2 (152-251)||(1625879-1625977)
chr2 (148-250)||(680483-680583)
chr2 (73-251)||(2416292-2416469)
chr2 (148-250)||(9395110-9395211)
chr2 (148-265)||(40279162-40279278)
chr2 (114-217)||(4606938-4607040)
chr2 (148-251)||(29316765-29316866)
chr2 (154-245)||(33942135-33942224)
chr2 (148-251)||(36043883-36043985)
chr2 (148-222)||(40279275-40279348)
chr2 (148-222)||(40279345-40279418)
chr2 (114-231)||(13325569-13325685)
chr2 (92-220)||(750680-750807)
chr2 (130-230)||(16451118-16451217)
chr2 (154-222)||(45229519-45229586)
chr2 (188-251)||(8017413-8017476)
chr2 (178-221)||(10646307-10646350)
chr2 (178-249)||(11513879-11513950)
chr2 (129-231)||(33319784-33319883)
chr2 (129-220)||(36114429-36114519)
chr2 (148-222)||(3611234-3611307)
chr2 (183-249)||(6167306-6167372)
chr2 (177-251)||(12464490-12464564)
chr2 (131-245)||(33256725-33256837)
chr2 (148-249)||(43279518-43279616)
chr2 (178-243)||(18179258-18179323)
chr2 (208-249)||(25800810-25800851)
chr2 (163-248)||(28039336-28039420)
chr2 (178-251)||(42457927-42458000)
chr2 (178-235)||(42621393-42621450)
chr2 (80-164)||(42419858-42419942)
chr2 (211-259)||(42592310-42592358)
chr2 (188-243)||(938538-938593)
chr2 (154-221)||(16398123-16398189)
chr2 (135-222)||(35378993-35379078)
chr2 (73-180)||(41812006-41812113)
chr2 (177-216)||(42419820-42419859)
chr2 (193-259)||(6227722-6227788)
chr2 (148-202)||(14220811-14220864)
chr2 (169-247)||(15377748-15377826)
chr2 (178-228)||(26143658-26143708)
chr2 (148-230)||(44600534-44600616)
chr2 (148-212)||(7928287-7928351)
chr2 (188-233)||(13736321-13736366)
chr2 (188-249)||(13869123-13869184)
chr2 (212-249)||(35755554-35755591)
chr2 (73-181)||(449895-450003)
chr2 (148-216)||(1647250-1647316)
chr2 (178-234)||(1893299-1893355)
chr2 (73-125)||(3312181-3312233)
chr2 (129-245)||(5759546-5759660)
chr2 (178-222)||(15977993-15978037)
chr2 (208-248)||(29300627-29300667)
chr2 (199-235)||(33931609-33931645)
chr2 (178-222)||(35993398-35993442)
chr2 (178-222)||(40279415-40279459)
[»] chr3 (45 HSPs)
chr3 (80-251)||(21367646-21367816)
chr3 (148-251)||(402531-402633)
chr3 (148-251)||(1217790-1217891)
chr3 (129-232)||(30443891-30443993)
chr3 (178-248)||(44488864-44488935)
chr3 (169-251)||(28622009-28622090)
chr3 (190-251)||(33405197-33405258)
chr3 (131-220)||(34610778-34610866)
chr3 (178-235)||(50600196-50600253)
chr3 (148-251)||(20880455-20880557)
chr3 (176-235)||(36507107-36507166)
chr3 (116-235)||(39602168-39602285)
chr3 (181-235)||(2719463-2719517)
chr3 (164-283)||(36783339-36783452)
chr3 (148-254)||(53789450-53789555)
chr3 (209-254)||(2923454-2923499)
chr3 (177-234)||(32582740-32582797)
chr3 (179-232)||(44747427-44747480)
chr3 (178-222)||(33883768-33883812)
chr3 (129-244)||(14548692-14548805)
chr3 (82-197)||(31365111-31365225)
chr3 (178-221)||(34924556-34924599)
chr3 (155-222)||(35394494-35394560)
chr3 (178-229)||(41633361-41633412)
chr3 (169-251)||(44061034-44061114)
chr3 (152-259)||(52440656-52440761)
chr3 (178-216)||(28795871-28795909)
chr3 (78-232)||(39980727-39980880)
chr3 (208-254)||(41057014-41057060)
chr3 (148-249)||(46030970-46031071)
chr3 (189-259)||(49092750-49092820)
chr3 (178-260)||(52618973-52619055)
chr3 (148-221)||(466202-466274)
chr3 (177-222)||(3845579-3845624)
chr3 (178-251)||(20669598-20669671)
chr3 (183-228)||(21335677-21335722)
chr3 (180-249)||(23315607-23315676)
chr3 (177-222)||(33972751-33972796)
chr3 (129-222)||(37273142-37273233)
chr3 (148-221)||(45541580-45541651)
chr3 (188-233)||(46886720-46886765)
chr3 (208-248)||(20874352-20874392)
chr3 (79-215)||(24085258-24085393)
chr3 (178-230)||(25075066-25075118)
chr3 (76-104)||(45083218-45083246)
[»] chr8 (46 HSPs)
chr8 (114-230)||(1930035-1930150)
chr8 (92-232)||(27028829-27028968)
chr8 (129-248)||(7514560-7514678)
chr8 (169-249)||(38874627-38874706)
chr8 (114-231)||(18133655-18133771)
chr8 (114-251)||(26771244-26771380)
chr8 (73-230)||(30251368-30251524)
chr8 (178-259)||(30389070-30389151)
chr8 (180-248)||(27754386-27754454)
chr8 (168-248)||(39268512-39268592)
chr8 (182-249)||(8062505-8062572)
chr8 (148-251)||(10120735-10120837)
chr8 (148-230)||(1113058-1113139)
chr8 (178-248)||(10114471-10114541)
chr8 (72-222)||(35534526-35534675)
chr8 (178-260)||(37353267-37353349)
chr8 (178-235)||(8062324-8062381)
chr8 (178-235)||(28769357-28769414)
chr8 (190-251)||(31804484-31804545)
chr8 (209-249)||(7645959-7645999)
chr8 (73-197)||(27492970-27493093)
chr8 (178-245)||(11795077-11795144)
chr8 (129-232)||(29168027-29168129)
chr8 (78-201)||(33808332-33808453)
chr8 (163-234)||(43504747-43504817)
chr8 (213-251)||(8909029-8909067)
chr8 (178-248)||(11376685-11376755)
chr8 (207-249)||(12361173-12361215)
chr8 (148-198)||(31751546-31751595)
chr8 (169-235)||(31862488-31862553)
chr8 (73-139)||(38602417-38602483)
chr8 (169-235)||(43717947-43718012)
chr8 (190-251)||(778368-778429)
chr8 (178-235)||(1433543-1433600)
chr8 (178-243)||(6864477-6864542)
chr8 (178-251)||(7918791-7918864)
chr8 (208-249)||(9834837-9834878)
chr8 (178-235)||(9956832-9956889)
chr8 (178-231)||(14247242-14247295)
chr8 (178-259)||(30013189-30013270)
chr8 (148-217)||(31716216-31716284)
chr8 (208-249)||(34770873-34770914)
chr8 (190-251)||(42237452-42237513)
chr8 (78-137)||(922325-922385)
chr8 (148-216)||(3536934-3537001)
chr8 (178-222)||(44236841-44236885)
[»] chr7 (41 HSPs)
chr7 (77-232)||(20526444-20526598)
chr7 (164-249)||(38010695-38010779)
chr7 (116-251)||(39967899-39968033)
chr7 (177-251)||(37064481-37064555)
chr7 (129-251)||(17248534-17248652)
chr7 (183-251)||(47177615-47177683)
chr7 (78-232)||(45593525-45593680)
chr7 (131-228)||(38499885-38499981)
chr7 (178-251)||(39907782-39907855)
chr7 (178-231)||(47559619-47559672)
chr7 (114-259)||(48470015-48470159)
chr7 (193-248)||(27548245-27548300)
chr7 (178-249)||(44821940-44822011)
chr7 (148-234)||(20526918-20527003)
chr7 (169-251)||(40688996-40689077)
chr7 (177-251)||(46280289-46280363)
chr7 (188-249)||(12110341-12110402)
chr7 (178-251)||(20881654-20881727)
chr7 (129-221)||(36517588-36517677)
chr7 (148-216)||(33601399-33601466)
chr7 (154-222)||(34035925-34035992)
chr7 (114-222)||(44989632-44989740)
chr7 (116-251)||(19022542-19022676)
chr7 (213-260)||(25296954-25297001)
chr7 (194-249)||(28340878-28340933)
chr7 (131-234)||(33678776-33678878)
chr7 (179-245)||(5628585-5628651)
chr7 (169-251)||(22283754-22283835)
chr7 (188-222)||(33552878-33552912)
chr7 (188-249)||(30456478-30456539)
chr7 (155-251)||(48507701-48507797)
chr7 (151-231)||(5947183-5947262)
chr7 (207-259)||(6263410-6263462)
chr7 (154-251)||(7241331-7241423)
chr7 (178-222)||(7244688-7244732)
chr7 (191-259)||(18350738-18350806)
chr7 (177-221)||(18865069-18865113)
chr7 (78-202)||(19302482-19302605)
chr7 (178-246)||(21453278-21453346)
chr7 (148-216)||(33602016-33602083)
chr7 (151-235)||(33673072-33673154)
[»] scaffold0221 (1 HSPs)
scaffold0221 (148-231)||(22230-22312)
[»] scaffold0024 (1 HSPs)
scaffold0024 (160-230)||(21287-21355)
[»] scaffold0018 (1 HSPs)
scaffold0018 (178-235)||(178343-178400)


Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 20031978 - 20031696
Alignment:
Q  1 tcgcgtcaagtgtttgtgtcggtgttttataggttctcatagtttttgcattattgaaatctgcttcaatcggggcttgtttggattgacatatttgagt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20031978 tcgcgtcaagtgtgtgtgtcggtgttttataggttctcatagtttttgcattattgaaatctgcttcaattggggcttgtttggattgacatatttgagt 20031879  T
Q  101 ttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagtt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20031878 ttatattctggcgtaagttttgtgatgttgtttgggagagcttgttgaaacagcttatggcattgttgataagctgtttttcagctcattttcataagtt 20031779  T
Q  201 ctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaatttagttttagcttttggtatagaaat 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20031778 ctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaatttagttttagcttttggtatagaaat 20031696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 78 - 247
Target Start/End: Original strand, 35571550 - 35571718
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||| | |||||||| |||| | || || |||||||||||   | |||||||||| ||| |  ||||||||||| ||| |||| || |||||     
T  35571550 tgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctgg 35571649  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||| || || ||||||| ||||||||||| ||||||||||||||| |||||||||||| | |||||||||    
T  35571650 ttt-caacttattttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 52315118 - 52315259
Alignment:
Q  80 tttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgttt 179  Q
    ||||||||||| ||||||||||||| | ||| ||||||||||||||  |||||||| ||| ||| |  ||||| ||||| ||||| || ||||| ||  |    
T  52315118 tttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttg-ct 52315216  T
Q  180 ttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||| ||||||||||||| || ||||||||||||| ||||    
T  52315217 ttcagcttattttcataagttttccaaaatagcttatggaaac 52315259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 1408038 - 1407935
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||||| || |||||||||||||||||| || ||||||| || ||  | ||||||||||||||| ||||  ||||||||  ||||||||    
T  1408038 aaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttatgaaaacagcttgcagcttacacaaaaacaat 1407939  T
Q  248 ttaa 251  Q
    ||||    
T  1407938 ttaa 1407935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 17822854 - 17822964
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||||| || ||||||| ||||| |||| |||||||||||||||| || |||||||||||||||  |||||||| || |  | ||||||    
T  17822854 aaacagcttatgacatttttcataagcttttttt-agcttattttcataagttctccaagatagcttatgaaaacaacttatagcatataaaataacaat 17822952  T
Q  248 ttaatttaattt 259  Q
    |||| |||||||    
T  17822953 ttaacttaattt 17822964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 24169419 - 24169271
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||||||||||||||| | |||| |||||||| | ||||| ||||||||||||   | |||| |||| ||| |  ||| ||||||||||||| || ||||    
T  24169419 gggcttgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataa 24169320  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    | | ||||||| || ||||||||||| |||| || ||||||| |||||||    
T  24169319 gat-tttttcaacttattttcataagctctccaagatagcttgtgaaaac 24169271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 32421147 - 32421087
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||| ||| ||||||||    
T  32421147 attttcataagttcttcaaaatagcttatggaaactgcttatagcttatatgtaaacaatt 32421087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 25904193 - 25904279
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||||||||||||||| |  |||||||||||| |||| || ||||||| |||||||||| ||||| |||||||||| |||| |||||||    
T  25904193 tgtttgggagagcttatgaaaacagcttatgccatttttcataagct-tttttcagcttatttttataagttctccaaaacagcttat 25904279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 55414409 - 55414482
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||||||||||| || ||||||| ||||||| || |||||||||||||||| || ||| |||||||||||    
T  55414409 aaacagcttatgacatttttcataagct-tttttcaacttattttcataagttctccaagataacttatgaaaac 55414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 27043749 - 27043921
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||||| |||||||| |||| | ||| | ||||||||||||   ||||||| |||  || | |||| |||||||| ||| ||  ||||  |||    
T  27043749 tgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatggcatcgtccataaattgt 27043848  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||| |||| || |||||| |||||| || |||| |||| |||||  ||||||||||| | |||||||||||||    
T  27043849 tttt-agcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaa 27043921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 29601026 - 29601091
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||||| ||||||||||||||||||  ||||| ||||||||| | ||||||||| ||||||||    
T  29601026 ttttcagcttattttcataagttctctaggatagcatatgaaaacagattatagcttgcatgaaaa 29601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 51630163 - 51630090
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||||||||| ||||  || ||||||||||||||  |||||||||||| || ||||||||||||    
T  51630163 ttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaa 51630090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 825508 - 825552
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  825508 ttttcagcttattttcataagttctccaaaatagcttatgaaaac 825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 13126531 - 13126630
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||   ||||||| ||| ||| |  |||||||||||||||||  | ||||||| |||||||||| |||||||||||||||| || ||||||    
T  13126531 taagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagct-tttttcagcttattttcataagttctcgaagatagct 13126629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 40174615 - 40174527
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa-tttaatttagtttt 265  Q
    |||||| || ||| ||| |||||||| ||  |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||    
T  40174615 ttttcaacttattatcacaagttctccaatgtagcttatgaaaacagcttatagcttttatgaaaacaatttaactttaatttattttt 40174527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 222
Target Start/End: Complemental strand, 54426194 - 54426051
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||| | |||||||| |||| | ||||| ||||||||||||   || |||||||| |||    ||||||||||||||| | || ||||||| |    
T  54426194 tgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagct-t 54426096  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||  | |||||||||||||||| || |||| |||| |||||    
T  54426095 ttttcaagttattttcataagttctccaatatagattataaaaac 54426051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 2703096 - 2703053
Alignment:
Q  160 acattgttgataagctgtttttcagctcattttcataagttctc 203  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  2703096 acattgttcataagctgtttttcagcttattttcataagttctc 2703053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 30207589 - 30207676
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaatttagtttt 265  Q
    ||||||||| |||| |||||  |||||||  ||||||||||||||  ||||||||||| ||||||||| ||| ||||| |||| ||||    
T  30207589 ttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttgatttattttattttt 30207676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 50004162 - 50004245
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa-tttaattta 260  Q
    ||||||||| |||||||||||||||| || ||| |||| |||||| ||| || | ||| ||||||||||||||| |||||||||    
T  50004162 ttttcagcttattttcataagttctccaagataacttaggaaaacagctcattgtttatatgaaaacaatttaactttaattta 50004245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 52746830 - 52746931
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||| ||||| ||| |||||||||||| ||||| |||||||||||   |  || ||||||||||||||| |||||| |||||||  ||||||||    
T  52746830 aaacagcttaagacat-gttcataagctgtttt-cagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaat 52746927  T
Q  248 ttaa 251  Q
    ||||    
T  52746928 ttaa 52746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 55302330 - 55302248
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    ||||||||||||||| | ||  |||||| |||||||||| ||||||||||||| || || ||||||||||| ||| ||||||||    
T  55302330 aaacagcttatgacaattttcgtaagct-tttttcagcttattttcataagttttccaacatagcttatgataacagcttatag 55302248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 437453 - 437523
Alignment:
Q  181 tcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||| |||||||||||  ||||||||||||||||||||||  |||| | |||| ||||| |||||||||    
T  437453 tcagcttattttcataaggcctctaaaatagcttatgaaaacaacttaaaacttatatgaacacaatttaa 437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 6364209 - 6364144
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||| ||||| |||||| ||||||||| |  |||||||||||||| |||||||||||||    
T  6364209 ataagctgtttt-cagcttattttcgtaagttctccattatagcttatgaaaattgcttatagctta 6364144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 50298568 - 50298506
Alignment:
Q  189 ttttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||| || || || |||||||||||||| ||||||||||  ||||||||||||||    
T  50298568 ttttcataagttttccaagatggcttatgaaaactgattatagcttatgtgaaaacaatttaa 50298506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 47118983 - 47119056
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| || ||||||||||||  || ||||| |||||| ||  ||||||||||| |||||||||||||||    
T  47118983 ttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaa 47119056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 1706703 - 1706604
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||| ||||||| ||||||| |||  || || ||||||||||| | || || |||| |||||||||| |||||||||||  | |||||||||    
T  1706703 aaacagcttatggcattgttcataagctatttc-caacttattttcataagctgtccaagatagtttatgaaaacagcttatagcttctacgaaaacaat 1706605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 249
Target Start/End: Complemental strand, 2996672 - 2996554
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    |||||| |||||||| |  ||||| |||||||||| ||  ||||||| ||||||| || ||||||||| | |||| || |||||||||||||||  ||||    
T  2996672 tgtttgagagagcttatgaaaacaacttatgacat-gtccataagct-tttttcaacttattttcatacgctctccaagatagcttatgaaaacaactta 2996575  T
Q  229 tagcttacatgaaaacaattt 249  Q
    || |||| || ||||||||||    
T  2996574 taacttatataaaaacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 36048582 - 36048518
Alignment:
Q  181 tcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    |||||| |||| |||||| ||||||| ||||||| ||||||  |||||||||||| |||||||||    
T  36048582 tcagcttatttccataagctctctaagatagcttttgaaaatagcttatagcttatatgaaaaca 36048518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 9841125 - 9841053
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    |||||||||||||||||| ||||||| ||||||   |  |||||||||||||||  ||||||||||| |||||||    
T  9841125 ataagctgtttttcagcttattttcacaagttcc--aggatagcttatgaaaacatcttatagcttatatgaaaa 9841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 16199998 - 16200053
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    ||||| |||| |||||||||||| ||| || ||||||||||||||| |||||||||    
T  16199998 ttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagc 16200053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 232
Target Start/End: Original strand, 21731570 - 21731728
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| |||||||||||   ||||||||  ||| | ||| | ||||||||||||  |||||||||||| ||| |  ||||||||||| ||| | || ||||    
T  21731570 gggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataa 21731669  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
     || ||||||| || | |||||||| ||||| || ||||||||| |||||  ||||||||    
T  21731670 act-tttttcaacttactttcataaattctccaatatagcttataaaaacaacttatagc 21731728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 44320001 - 44319934
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    |||||| || ||||||||||||||||||  ||||||||| ||||  |||| ||||||| |||||||||    
T  44320001 ttttcaactaattttcataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaaca 44319934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 2244202 - 2244065
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||||  |||  |||||||| | ||| | |||||||| |||   |||||||||||  || |  ||||||||||||||| | || |||| || |    
T  2244202 tgtttggattgatttatccgagtttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaact-t 2244104  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttat 216  Q
    |||||| || |||||||||||||||| || |||||||||    
T  2244103 ttttcaccttattttcataagttctccaatatagcttat 2244065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 8469000 - 8468930
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||||| | ||||||||||| |||||| |||| |||||||||||  || |||||||| ||||||| ||||    
T  8469000 ttttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttatatgaaaaaaatt 8468930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 25332890 - 25332753
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttct-ctaaaatagc 212  Q
    ||||||||||||   | ||||||||| ||||   ||||| |||||| |||| || ||||| |||||| ||||| |||||||||||||||  ||| |||||    
T  25332890 taagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgtttt-cagcttattttcataagttctgataagatagc 25332792  T
Q  213 ttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||| ||||  ||||| |||||| |  ||||||||||||    
T  25332791 ttataaaaatagcttagagcttatacaaaaacaatttaa 25332753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 25548548 - 25548610
Alignment:
Q  179 tttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaa 241  Q
    ||||||||  ||||| ||| ||||| |||||||||||||||||| ||||||| ||| ||||||    
T  25548548 tttcagcttgttttcgtaatttctccaaaatagcttatgaaaacagcttatatctttcatgaa 25548610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 39603086 - 39603232
Alignment:
Q  74 ggcttgtttggattgacatatttgag-tttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    ||||||||||||||| | |||||||| ||| ||||  ||  ||||||||||||   ||||||||||| |||    ||||||||||||||| | || ||||    
T  39603086 ggcttgtttggattggcttatttgagctttctatt--ggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataa 39603183  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||| ||||| || | |||||||||||||||| || ||| ||||| |||||    
T  39603184 gctttttttaagtt-attttcataagttctccaatataccttataaaaac 39603232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 3175973 - 3175932
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  3175973 atagcttatgaaaacagcttataacttacttgaaaacaattt 3175932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 17884120 - 17884047
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||  || ||| |||| |  ||||||||||||    
T  17884120 ttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaa 17884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 21157848 - 21157753
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    ||||||||||||||||| |  | ||||||||||| |||| |||| |||||| |||  |  ||||| |||||||||  |||||||||||||||||||||    
T  21157848 aaacagcttatgacatt-tacaaaagctgttttt-agcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaaca 21157753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 26884047 - 26883974
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||| | ||||||||| |||||| || | || ||| ||||||  ||||||||||| |||||||||||||||    
T  26884047 ttttcagtttattttcataggttctccaataaagtttacgaaaacgacttatagcttatatgaaaacaatttaa 26883974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 42685498 - 42685403
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||| ||| ||||| |||||||  ||| ||||||| | |||||| ||||||||||||||||||  |||| |||||| |  ||||||||||||    
T  42685498 cttatgacat-gtttataagttgtttttg-gcttattttcacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaa 42685403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 53294132 - 53294205
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||  |||||||||||||||||| |||| |||| |||||  |||||||| || |  ||||||||||||    
T  53294132 ttttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatatacaaaaacaatttaa 53294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 55064935 - 55064812
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagc--ttatgaaaactgct 226  Q
    ||||||||||| ||| |  ||||| ||||||||||| || |  |||| ||||||| || |||||||||||||||| || ||| |  |||||||||| ||     
T  55064935 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagct-tttttcatcttattttcataagttctccaagataacatttatgaaaacagca 55064837  T
Q  227 tatagcttacatgaaaacaatttaa 251  Q
    |||||| ||||  ||||||||||||    
T  55064836 tatagcatacacaaaaacaatttaa 55064812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 47800675 - 47800623
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||| ||||||||||| |||  || ||||||||||||||| |||||||    
T  47800675 ttttcagcttattttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 39105545 - 39105443
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||| || ||||||||||||||| | |||||||||| | |||||||||    
T  39105545 aaacagcttatgacattgttcataagctattttt-agcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaat 39105447  T
Q  248 ttaa 251  Q
    ||||    
T  39105446 ttaa 39105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 259
Target Start/End: Complemental strand, 10640109 - 10639924
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| ||||||||||  | ||||||||||||| | ||| | ||||||||||||| |||||||||||| ||| |  ||||||||||||||||| || ||||    
T  10640109 gggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa 10640010  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    ||| ||||  |||| |||||||||||||||| ||||||| ||||| ||||  || ||  | || |  ||||||||||||||||||||    
T  10640009 gct-ttttctagcttattttcataagttctccaaaatagtttatgtaaacaactcatcacatatacaaaaacaatttaatttaattt 10639924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 9202737 - 9202839
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||||||| |||||||||||  ||||| |||||||||||||||  || ||| ||||||||||| |||||| ||||| |||||||||||    
T  9202737 aaacagcttatgacattgttcataagctgtttc-cagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaat 9202835  T
Q  248 ttaa 251  Q
    ||||    
T  9202836 ttaa 9202839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 240
Target Start/End: Complemental strand, 41419471 - 41419310
Alignment:
Q  77 ttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctg 176  Q
    |||||||||||||| |||||||| | || | ||| | ||| ||||||||  |||||||||| | |||||  |||||||||||||||||||| || ||||     
T  41419471 ttgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagct- 41419373  T
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatga 240  Q
     ||||||| | | |||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  41419372 attttcagatta-tttcattaagtctcaaaaatagcttatgaaaacaacttatagcttacatga 41419310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 41957441 - 41957542
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||| ||  ||||| |||||| || || |||||||||||||||| |  ||||||||||||||| ||||||| ||||||||||||||||    
T  41957441 aaacagcttatgacat-gtccataagttgtttt-catcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaat 41957538  T
Q  248 ttaa 251  Q
    ||||    
T  41957539 ttaa 41957542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 7985105 - 7984965
Alignment:
Q  93 atttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcatttt 192  Q
    ||||||| |||| | ||||| |||| |||||||   | |||||||||||||    ||||||||| |||| ||||| |||||||||||| ||||| |||||    
T  7985105 atttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgtttt-cagcttatttt 7985007  T
Q  193 cataagttctctaaaatagcttatgaaaactgcttatagctt 234  Q
    ||||| ||||| || ||||||||||||||  |||||||||||    
T  7985006 cataaattctccaagatagcttatgaaaaaagcttatagctt 7984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 242
Target Start/End: Complemental strand, 41534590 - 41534429
Alignment:
Q  77 ttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctg 176  Q
    |||||||||||||| |||||||| | || | ||| | ||| ||||||||  |||||||||| | |||||  ||||||||||||||   ||| ||||||||    
T  41534590 ttgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgac---gttcataagctg 41534494  T
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaa 242  Q
    |||| ||| | ||||    |||||||| ||||||||||||||||||  |||||||||| |||||||    
T  41534493 tttt-cagattatttcttcaagttctcaaaaatagcttatgaaaacaacttatagcttccatgaaa 41534429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 12425623 - 12425550
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||| || |||||||||||||||| || ||||||| ||||||| |||||||||||| | |||||||||||||    
T  12425623 ttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaa 12425550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 16937802 - 16937974
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||| | |||||||| |||| | || || ||||||||||||   ||||||| ||| ||| |  |||||||||||||||   || ||||||| |    
T  16937802 tgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagct-t 16937900  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||||| ||||||||| || ||||| ||| |||||  |||||||| || |  ||||||||||||    
T  16937901 ttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaa 16937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 7319457 - 7319385
Alignment:
Q  179 tttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||| ||||| |||||||||| || |||||||| |||||| | |||||||||| |||||||||||||||    
T  7319457 tttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaa 7319385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 4014429 - 4014493
Alignment:
Q  164 tgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttat 229  Q
    |||| |||||||||||| ||||| |||||||||||||||| || ||||||||||||||| ||||||    
T  4014429 tgttcataagctgtttt-cagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 6183496 - 6183431
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||||| |||| |||||| |||| |||| |||||||||| || ||||||||||||||||||||    
T  6183496 ttttcagcttatttccataagctctccaaaacagcttatgaatacagcttatagcttacatgaaaa 6183431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 6096628 - 6096546
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttct--ctaaaatagcttatgaaaactgcttat 229  Q
    ||||||||| |||||||||| |||||||||| | |||||||||||||||| ||||  | ||||||||||||| |||| ||||||    
T  6096628 aaacagcttgtgacattgttcataagctgttct-cagctcattttcataaattctgccaaaaatagcttatggaaacagcttat 6096546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 6587097 - 6587195
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||  ||| |||||||||||  ||||| ||||||| |||||||| |  |||||||||||||||  ||||||||||| | |||||||||    
T  6587097 aaacagcttatgacag-gttcataagctgttta-cagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaacaat 6587194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 260
Target Start/End: Complemental strand, 39594963 - 39594777
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||||||||||||||||| |||||||| |||| | | | | |||||||||| |  |||||||||| | ||| |  |||||||| | || | ||||  |||    
T  39594963 gggcttgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttattaa 39594864  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattta 260  Q
    | || ||||||||| ||||||||||||||   || ||| ||||||||||| ||||| | ||||   |||||||||||| |||| ||||    
T  39594863 gttg-ttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaatttactttatttta 39594777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 42100388 - 42100306
Alignment:
Q  152 agcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||| ||| | ||| |||||| || || |||||||||||||||| ||||||||||| |||| | ||||||||||||    
T  42100388 agcttatgacatagttcaaaaggtgtttt-catcttattttcataagttctcaaaaatagcttacgaaatccgcttatagctta 42100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 7674728 - 7674600
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||| |||||||||| ||| ||||| |||||| ||||| ||||||| || ||||| || |||||||||||||||   |||| ||||| | |||||||||    
T  7674728 aaacaacttatgacat-gtttataaggtgtttt-cagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataagaaaacaat 7674631  T
Q  248 ttaatttaatttagttttagcttttggtatagaaat 283  Q
    |||    |||||| ||||| ||||||||||||||||    
T  7674630 tta----aattta-ttttatcttttggtatagaaat 7674600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 12975384 - 12975318
Alignment:
Q  193 cataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||| |||| || |||||||||||| || |||||||||||| ||||||||||||| |||| ||||    
T  12975384 cataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattt 12975318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 10272449 - 10272530
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    ||||||||| ||||||||||  |||| || || ||||||||||||  ||||||||||| | ||||||||||| | |||||||    
T  10272449 ttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattt 10272530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 42099862 - 42099914
Alignment:
Q  149 aacagcttatgacattgttgataagctgtttttcagctcattttcataagttct 202  Q
    ||||||||||||||||||| |||||||||||||  ||| |||||||||||||||    
T  42099862 aacagcttatgacattgttcataagctgttttt-ggcttattttcataagttct 42099914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 37588365 - 37588444
Alignment:
Q  164 tgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaac 244  Q
    |||| |||||||||||| ||||| |||| |||||| |||| | |||| |||||||||||  ||||||||||| ||||||||    
T  37588365 tgttaataagctgtttt-cagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 37588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 3280704 - 3280785
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataa-gttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||||||||||  || ||||||| ||||| || | |||||||||| |||||| || |||||||||||||||||||||||    
T  3280704 aaacagcttatgacatc-ttcataagctcttttt-agtttattttcataaagttctcaaagatagcttatgaaaactgcttata 3280785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 7705912 - 7706054
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| ||||||||||||| ||||||||  ||| | || || |||||||||||| | | ||||||||| ||| |  ||||||||||||||| | || |       
T  7705912 gggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacct 7706011  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||| |||||| ||| ||||||| |||||||| || |||||||||    
T  7706012 gct-tttttcggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 32942659 - 32942616
Alignment:
Q  189 ttttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    ||||||||||||||| || ||||||||||||||| |||||||||    
T  32942659 ttttcataagttctccaagatagcttatgaaaacagcttatagc 32942616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 41016611 - 41016572
Alignment:
Q  196 aagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  41016611 aagttctctaagatagcttatgaaaacggcttatagctta 41016572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 42569810 - 42569739
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||| ||||| |||||||||| ||  || |||||||| || |||||||||||| | |||||||||||    
T  42569810 ttttcagcttatttttataagttctccaagctaccttatgaagacagcttatagcttagacgaaaacaattt 42569739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 6593351 - 6593297
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    ||||||||| ||||||||||| |||||||  |||||||| ||||| |||||||||    
T  6593351 ttttcagcttattttcataagctctctaaggtagcttatcaaaacagcttatagc 6593297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 7808605 - 7808540
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcat 195  Q
    ||||||||||||||| |  ||| ||||||| |||||||| |||||||| ||||||||| ||||||||    
T  7808605 tgtttgggagagcttatgaaaatagcttataacattgttcataagctg-ttttcagcttattttcat 7808540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 10363803 - 10363729
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaact-gcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| ||||||| ||||||||| | |||| ||||||||| | |||||| | | |||||||||||||||||    
T  10363803 ttttcagcttattttcacaagttctctgagatagtttatgaaaaatagcttattgttaacatgaaaacaatttaa 10363729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 19138735 - 19138808
Alignment:
Q  178 ttttcagctcattttcataagttctc--taaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||| |||| |||||| ||||  || ||||||||||||||||  |||||||||||  ||||||||||||    
T  19138735 ttttcagcttatttccataagctctccatataatagcttatgaaaacaacttatagcttatctgaaaacaattt 19138808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 28777067 - 28776978
Alignment:
Q  155 ttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    ||||||||||||| | || || ||||| | || |||||||| ||||||| || ||||||||||||||| ||||||||| || | |||||||    
T  28777067 ttatgacattgttcaaaaactattttt-atcttattttcattagttctccaagatagcttatgaaaacagcttatagcctatacgaaaaca 28776978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 29925940 - 29925839
Alignment:
Q  130 gtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttat 229  Q
    |||||||||| ||| |  ||||||||||||||| |||| ||  | | ||||||| || |||||||||||||||| || |||||||||| ||||  |||||    
T  29925940 gtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtt-tttttcaacttattttcataagttctccaatatagcttatgtaaacaacttat 29925842  T
Q  230 agc 232  Q
    |||    
T  29925841 agc 29925839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 43301034 - 43300893
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| ||||||||||| | |||||||| ||||||  |||| |||||||| |||   |||| ||||||  || |  ||||||| ||||||||| |  ||||    
T  43301034 gggcatgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatataa 43300935  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagctta 215  Q
    ||  | |||||||| |||||||||||||||| || ||||||||    
T  43300934 gca-tgtttcagcttattttcataagttctccaagatagctta 43300893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 7319029 - 7319070
Alignment:
Q  181 tcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  7319029 tcagcttattttcataagttctccaagatagcttatgaaaac 7319070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 16380561 - 16380660
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||| ||||| ||  |||||||||||| ||||| |||| ||||||||||||  ||||| ||||||||||   |||||||||| || ||| ||||    
T  16380561 aaacagcttacgacat-gtccataagctgttttgcagcttatttccataagttctctggaatag-ttatgaaaacattttatagcttatatcaaaccaat 16380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 260
Target Start/End: Original strand, 16457935 - 16458079
Alignment:
Q  115 aagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagctt 214  Q
    |||||||||||   ||||||||||| ||| |  ||||||||||||||| | || |||||||  ||||||| | ||||||| |||||||| ||  |||||     
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagct-cttttcagtttattttcacaagttctccaatttagctc 16458033  T
Q  215 atgaaaactgcttatagcttacatgaaaacaatttaatttaattta 260  Q
    || |||||  |||||||| || |  |||||||||||| ||| ||||    
T  16458034 ataaaaacaacttatagcatatacaaaaacaatttaagttatttta 16458079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 42582964 - 42582891
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||| |||| |||||||||||||||| || ||||||||  ||||| ||||||| |||| | ||| |||||||||    
T  42582964 ttttgagcttattttcataagttctccaatatagcttacaaaaacagcttataccttaaacgaacacaatttaa 42582891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 9107240 - 9107117
Alignment:
Q  79 gtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtt 178  Q
    |||||||||||| ||||||||||||| |  || | ||||||||||||   ||||||||||| ||  |  |||||||||| |||| | || | || || ||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaact-tt 9107142  T
Q  179 tttcagctcattttcataagttctc 203  Q
    |||| ||| ||||||||||||||||    
T  9107141 tttctgctaattttcataagttctc 9107117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 15246864 - 15246804
Alignment:
Q  199 ttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||||| ||||||||||||||| ||| |||||||| | ||||| | ||||| |||||||    
T  15246864 ttctctaagatagcttatgaaaacagctcatagcttatacgaaaatagtttaaattaattt 15246804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 15402847 - 15402903
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctt 234  Q
    ||||||||| ||||  ||| |||||||||||||| ||||||||||  ||||||||||    
T  15402847 ttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 15402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 32172705 - 32172637
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaa 246  Q
    ||||||||| |||| ||| ||||||  |  ||||||||||||||| |||||||||||| ||| ||||||    
T  32172705 ttttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatagcttatatgtaaacaa 32172637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 37526204 - 37526283
Alignment:
Q  164 tgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaac 244  Q
    |||| |||||||||||| ||||| |||| |||||| |||| | || | |||||||||||  ||||||||||| ||||||||    
T  37526204 tgttaataagctgtttt-cagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaac 37526283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 49938892 - 49938755
Alignment:
Q  84 gattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttca 183  Q
    ||||||| |||||||||||||||  |||| ||||||||||||  |||||||||||| ||| |  ||||||||||||||| | || | ||||| |||||||    
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagct-tttttca 49938794  T
Q  184 gctcattttcataagttctctaaaatagcttatgaaaac 222  Q
     || ||||||||||||||||||| ||||||||| |||||    
T  49938793 acttattttcataagttctctaatatagcttataaaaac 49938755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 10744399 - 10744300
Alignment:
Q  130 gtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttat 229  Q
    |||||||||| |||||  |||||||||||| ||| ||| |||||||||||| || || ||||| ||||||||||||| | ||||||||||||| ||||||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggcat-gttcataagctgtttt-catcttatttttataagttctctaagacagcttatgaaaacagcttat 10744302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 51695484 - 51695595
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||| ||||| |||||||| ||||||| |||| ||||| |||||||||| ||||| || |||||||||||||||  || ||| |||| | |||||||||    
T  51695484 aaacaacttatcacattgttcataagctatttt-cagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacgaaaacaat 51695582  T
Q  248 ttaatttaattta 260  Q
    ||| |||| ||||    
T  51695583 ttactttatttta 51695595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 836328 - 836438
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||| || | ||||| ||||||| ||||||||||||| |||| ||| ||||||||||| ||||   ||||||||||| |  ||||||||    
T  836328 aaacagcttatgacaatgctcataagttgttttt-agctcattttcattagttttcttaaatagcttataaaaataacttatagcttatacaaaaacaat 836426  T
Q  248 ttaatttaattt 259  Q
    ||| ||| ||||    
T  836427 ttagttttattt 836438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 14576573 - 14576714
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||| | |||||||| |||| | ||||| ||| |||||||    ||||||||| | |||||  ||||||||||||||| | || | ||||| |    
T  14576573 tgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagct-t 14576671  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||||||||| ||||||| ||||||||||| ||||||||| ||||    
T  14576672 ttttcagcttattttca-aagttctctaatatagcttataaaaa 14576714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 24915040 - 24915142
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||| ||||||||||| || ||||||| ||||||| || ||||||| |||||||| || | ||||||||||||| ||||||||| || |  ||||||||    
T  24915040 aaacaacttatgacatttttcataagct-tttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaat 24915138  T
Q  248 ttaa 251  Q
    ||||    
T  24915139 ttaa 24915142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 6102297 - 6102153
Alignment:
Q  85 attgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcag 184  Q
    |||||| ||||||||||||| | | ||| ||| ||||||||  |||||||||||| ||  |  ||||||||||||| |||||| ||||  |||||| |||    
T  6102297 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgtttt-cag 6102200  T
Q  185 ctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    || |||| ||||| |||||  | ||||||||||||||| ||||||||    
T  6102199 cttatttccataaattctcccagatagcttatgaaaacagcttatag 6102153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 31517711 - 31517831
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||||| ||| |  ||||| || ||||||| ||| |||||||||||| ||||| ||||||||||| |||| || | || ||||||| || |||||    
T  31517711 tgtttgggagaacttatcaaaacaactcatgacat-gttcataagctgtttt-cagcttattttcataagctctccaagacagattatgaagacagctta 31517808  T
Q  229 tagcttacatgaaaacaatttaa 251  Q
    ||||||| |||||| ||||||||    
T  31517809 tagcttatatgaaatcaatttaa 31517831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 41195155 - 41195255
Alignment:
Q  120 ttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaa 219  Q
    |||||||  ||||||||||| ||| |  ||| ||||||||||||| || ||||||| |||||||||| |||||||||||||||| || |||| |||||||    
T  41195155 ttgtgatactgtttgggagaacttttataaatagcttatgacatt-ttaataagct-tttttcagcttattttcataagttctccaagatagtttatgaa 41195252  T
Q  220 aac 222  Q
    |||    
T  41195253 aac 41195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 49888819 - 49888749
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||  || |||||||| | ||||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaatt 49888749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 3233934 - 3234106
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||||| |||||||| |||| |  || ||||||||||||||   |||| |||||| ||| |  ||||| ||||| ||| | || ||||| | |    
T  3233934 tgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagtt-t 3234032  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||  || |||||||||||||||| || ||||||||| |||||  |||||||| || |  ||||||||||||    
T  3234033 ttttctacttattttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaa 3234106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 7137016 - 7137069
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    ||||||||| |||||||||||||||| || ||||||||||||||| ||||||||    
T  7137016 ttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatag 7137069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 249
Target Start/End: Original strand, 7218044 - 7218163
Alignment:
Q  128 ttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctt 227  Q
    ||||||||| ||||||||  ||||  |||||||||  ||| | |||||||||| || || |||||||||||||||| |  |||| ||||||||||  |||    
T  7218044 ttgtttgggggagcttgtgaaaacgacttatgacac-gttcacaagctgtttt-caacttattttcataagttctccaggataggttatgaaaacaactt 7218141  T
Q  228 atagcttacatgaaaacaattt 249  Q
    |||||||| |||||||||||||    
T  7218142 atagcttatatgaaaacaattt 7218163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 10199402 - 10199469
Alignment:
Q  152 agcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    |||||||||||| ||| ||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  10199402 agcttatgacat-gttcataagttgtttt-cagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 34290288 - 34290231
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||||||||||||||  || ||||||||||||||| ||||||||||||    
T  34290288 ttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagctta 34290231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 7069376 - 7069277
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatt 253  Q
    |||||||||||||| ||||  ||||||| |  |||||||||||||||||| || ||||||||  ||| | |||||||||||| | |||||||||| ||||    
T  7069376 cttatgacattgttcataatttgtttttaat-tcattttcataagttctccaagatagcttacaaaagcagcttatagcttatacgaaaacaattcaatt 7069278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 2295247 - 2295105
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    |||||| |||| | |||||||| |||| | ||||| ||||||||||||   ||||||||||| ||| |  ||||||||||||||| | || |||||||      
T  2295247 tgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagct-c 2295149  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    | |||| || ||||||| ||||||||| | ||||||||| ||||    
T  2295148 tattcaacttattttcacaagttctctgatatagcttataaaaa 2295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 230
Target Start/End: Complemental strand, 6292644 - 6292493
Alignment:
Q  77 ttgtttggattgacatatttgagtttatattctggcgtaag---ttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataag 173  Q
    |||||||||||||| |||||||| |||| | ||| | ||||   ||||| |||  |||||||||||  || || |||||||||||||||| ||| |||||    
T  6292644 ttgtttggattgacttatttgagcttatctactgacataagcacttttgagat--tgtttgggagaattt-ttaaaacagcttatgacat-gttcataag 6292549  T
Q  174 ctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||| ||||| ||||||||||| |||| ||||||| ||| |||||  |||||||    
T  6292548 ctgtttt-cagcttattttcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 7941757 - 7941615
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    |||||||||||   ||||||||||||| | ||  ||| ||||||||||   ||||||| |||  || |  ||||||||||||||||||||   ||||| |    
T  7941757 tgtttggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacattgttccgaagctat 7941658  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||| || || ||||||||||||||||  ||||||||||||||||    
T  7941657 ttt-caacttattttcataagttctccgaaatagcttatgaaaa 7941615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 25479633 - 25479562
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||| ||||||||||| ||||||  |||||||||||||||  |||||||| || ||||| |||||||    
T  25479633 ttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaattt 25479562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 27970243 - 27970389
Alignment:
Q  108 ctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagtt-ctctaa 206  Q
    ||||| |||||||||||||  | ||||||||| ||| |  |||| | |||||||||| || ||||||| |||||||| | ||||||||||||| | | ||    
T  27970243 ctggcataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagct-tttttcagtttattttcataagttccccaaa 27970341  T
Q  207 aatagcttatgaaaactgcttatagcttacatgaaaacaatttaattt 254  Q
    ||||| ||||| ||||  |||||||| || |  |||||||||||||||    
T  27970342 aatagtttatggaaacaacttatagcatatacaaaaacaatttaattt 27970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 45975759 - 45975685
Alignment:
Q  160 acattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||| || |||||||||||| ||||| |||||||||| ||||| || ||||||||||||||| |||| |||||||    
T  45975759 acattattcataagctgtttt-cagcttattttcataaattctccaagatagcttatgaaaacagcttgtagctta 45975685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 35179199 - 35179134
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||| ||||| |||||||||||||||| | |||| ||||||||||| ||||||| ||||    
T  35179199 ataagctgtttt-cagcttattttcataagttctccataataacttatgaaaacagcttataactta 35179134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 3887587 - 3887675
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctc 203  Q
    |||||||||| | | ||||||| ||| ||| |  ||||| |||||||||||||| ||||||||||||| | || ||||||||||||||||    
T  3887587 taagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagctgttttt-aacttattttcataagttctc 3887675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 7472363 - 7472290
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| ||||||||||| |||| || |||||||||| |||| |||||||| ||| |  ||||||||||||    
T  7472363 ttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaa 7472290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 26946465 - 26946522
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||||||| | |||||||| |||||||||||||||  |||||||||||    
T  26946465 ttttcagcttattttcatgacttctctaagatagcttatgaaaacgacttatagctta 26946522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 34952267 - 34952194
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||||||||||||||||   |||||||||||||||  |||| ||||||   |||||||||||||    
T  34952267 ttttcagcttattttcataagttctctttgatagcttatgaaaacaacttacagcttattcgaaaacaatttaa 34952194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 38503454 - 38503518
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||| |||||||||||| ||||| |||||| ||||| |||||||||||||||| || ||||||    
T  38503454 aaacagcctatgacattgttcataagttgtttt-cagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 3224472 - 3224412
Alignment:
Q  181 tcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaa 241  Q
    |||||| |||||||||||||||||| |||||||||| |||||  | ||||||||| |||||    
T  3224472 tcagcttattttcataagttctctagaatagcttataaaaacaccctatagcttatatgaa 3224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 5721025 - 5720934
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||||||||||| ||| |  ||||||||||||||| | || |||||   |||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  5721025 tgtttgggagaacttatgaaaacagcttatgacaat-ttcataagtattttttcagctgattttcatatgttctctaatatagcttataaaaa 5720934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 5741659 - 5741615
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||    
T  5741659 tttttcagctgattttcataagttctctaatatagcttataaaaa 5741615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 49517091 - 49517051
Alignment:
Q  209 tagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaattt 49517051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 10809397 - 10809338
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttaca 237  Q
    ||||||||| |||||||||||||||| || |||||| |||| |||  |||||||||||||    
T  10809397 ttttcagcttattttcataagttctccaatatagctgatgagaacaacttatagcttaca 10809338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 11941362 - 11941296
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcata 196  Q
    ||||||||||||||| |  ||| ||||||| |||||||| |||||||| ||||||||| |||||||||    
T  11941362 tgtttgggagagcttatgaaaatagcttataacattgttcataagctg-ttttcagcttattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 15579504 - 15579457
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaatttaattta 255  Q
    |||||||| || ||| |||||||||||||||||||||||||| |||||    
T  15579504 atagcttacgagaacagcttatagcttacatgaaaacaatttgattta 15579457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 25006068 - 25006123
Alignment:
Q  194 ataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||| |||| || |||||||||||||||  ||||||||||| |||||||||||||    
T  25006068 ataagatctccaagatagcttatgaaaacaacttatagcttatatgaaaacaattt 25006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 37473504 - 37473430
Alignment:
Q  128 ttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctc 203  Q
    |||||||||||| ||| |  ||||| ||||||||||| || ||||||| |||| ||||| ||||||||||||||||    
T  37473504 ttgtttgggagaacttttgaaaacaacttatgacatttttcataagct-ttttccagcttattttcataagttctc 37473430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 473217 - 473143
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||| || |||||||||||||||| || | | ||||| |||||  |||||||| |||| |||||||||||||    
T  473217 tttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaa 473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 4622153 - 4622080
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||||||||| |||| ||||||| ||| |||| || ||||| |||| |||| |||||||||||| |||||||    
T  4622153 ataagctgttttt-agcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaa 4622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 5591994 - 5592056
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattta 250  Q
    |||| |||||||| ||||| ||| |||||||||||   |||||| ||||||||||||||||||    
T  5591994 atttccataagttatctaagatatcttatgaaaacgtattatagtttacatgaaaacaattta 5592056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 11639406 - 11639478
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||||||||||||| ||  ||||||||||||| |||| ||||||||||| |||||| |||| |||||| ||||    
T  11639406 aaacagcttatgacat-gtccataagctgttttt-agcttattttcataagctctctagaataacttatgcaaac 11639478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 37593680 - 37593744
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaa 220  Q
    |||||||||| ||| |||||||||||| ||||| ||||||||||| |||  ||||||||||||||||    
T  37593680 cttatgacat-gttcataagctgtttt-cagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 37631548 - 37631649
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||| ||||| | || | ||||| |||||||||| |||||||||||||||| || ||||||||  ||||| ||| ||| | ||||  ||||||||    
T  37631548 aaacagcttctgacaattttcacaagct-tttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatacacaaaaacaat 37631646  T
Q  248 tta 250  Q
    |||    
T  37631647 tta 37631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 47498759 - 47498879
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||||| |||| ||| |||| |  |||| |||||||| ||   |||||||||||| ||| |  ||| ||||||||| |||||| ||||| |||    
T  47498759 tgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagttgt 47498857  T
Q  178 ttttcagctcattttcataagtt 200  Q
    |||| |||| |||||||||||||    
T  47498858 tttt-agcttattttcataagtt 47498879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 2777944 - 2777887
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||||||||||||||| ||  || ||||| ||||| ||||||||||||    
T  2777944 ttttcagcttattttcataagttctccaagttaacttattaaaacagcttatagctta 2777887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 23902085 - 23902150
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||||| | || |||||| ||||||| ||||||| |||||||  ||||||||||| |||||||    
T  23902085 ttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaa 23902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 37842373 - 37842430
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| ||||| |||||||||  || |||||||||||||||  |||||||||||    
T  37842373 ttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagctta 37842430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 42174933 - 42174853
Alignment:
Q  151 cagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    |||||||||||| | || ||||||||||||| | || |||||||||||||||| || ||| ||||| |||||  ||||||||    
T  42174933 cagcttatgacaattttcataagctgtttttaa-cttattttcataagttctccaatataacttataaaaacaacttatagc 42174853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 51929528 - 51929628
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||| | || ||||||| ||||||| || |||| ||||||||||| || |||| |||| ||||| |||||  || || || ||||||||    
T  51929528 aaacagcttatgacaattttcataagct-tttttcaacttatttccataagttctccaatatagtttataaaaacagcttaaggcatatataaaaacaat 51929626  T
Q  248 tt 249  Q
    ||    
T  51929627 tt 51929628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 12564517 - 12564561
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||    
T  12564517 ttttcagcttatttccataagttctccaagatagcttatgaaaac 12564561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 15477646 - 15477579
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||||||||||||||| | || | ||||| |||||||||| || |||||||||||||||| ||| |||||    
T  15477646 aaacagcttatgacaattttcaaaagct-tttttcagcttatattcataagttctctaatataacttat 15477579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 15784404 - 15784329
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    |||||||||||||| | ||| ||||||| |||| ||||||| |||||||| || ||||||||| ||| | |||||||    
T  15784404 cttatgacattgttcacaagttgttttt-agcttattttcacaagttctccaagatagcttataaaaccagcttata 15784329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 25944484 - 25944420
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaa 242  Q
    ||||||||| |||||||||| |  || |  ||||||||||||||| ||||||| |||||||||||    
T  25944484 ttttcagcttattttcataattaatccaggatagcttatgaaaaccgcttataacttacatgaaa 25944420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 28077087 - 28077131
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||    
T  28077087 ttttcagcttatttcaataagctctctaaaatagcttatgaaaac 28077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 37295749 - 37295809
Alignment:
Q  191 ttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||| ||| ||||| |||| ||||||||||  ||||||||||| | |||||||||||||    
T  37295749 ttcatacgttttctaagataggttatgaaaacaacttatagcttaaacgaaaacaatttaa 37295809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 9093528 - 9093647
Alignment:
Q  131 tttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    |||| |||||||| |  ||| |||||||||||||||| |||| ||||||| ||||| |||||| |||||||||||| | ||||||||||||| |||||||    
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgtttt-cagcttattttcttaagttctctaagacagcttatgaaaacagcttata 9093626  T
Q  231 gcttacatgaaaacaatttaa 251  Q
    ||||| | |||||||||||||    
T  9093627 gcttatacgaaaacaatttaa 9093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 837234 - 837307
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||||||||||||||| || |||||| ||||||||| |||||||||||||  ||||||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaa 837307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 835267 - 835321
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||||||    
T  835267 ttttcagcttattttcataagttctccaagatagcttatgaaaactgcttatagc 835321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 11784069 - 11784153
Alignment:
Q  199 ttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaatttagttttagcttttggtatagaaat 283  Q
    ||||| || ||||||||||||||| ||||||||| || |  ||||||||||||||||||||| ||||| | |||| |||||||||    
T  11784069 ttctccaatatagcttatgaaaacagcttatagcatatacaaaaacaatttaatttaatttaattttatcatttgttatagaaat 11784153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 34430450 - 34430561
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||||  | ||||||| |||||||||| |||||||||| ||||| || |||||||||||||||  |||||| | || |  ||||||||    
T  34430450 aaacagcttatgacatttatcataagct-tttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaacaat 34430548  T
Q  248 ttaatttaattta 260  Q
    || |||| |||||    
T  34430549 tttattttattta 34430561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 31624170 - 31624085
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||||||| ||| |||||||||||| || || |||||||||| ||||| || ||||| ||||||||| ||||||||||||    
T  31624170 aaacagcttatgacat-gttcataagctgtttt-caacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 31671092 - 31671165
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| ||||||||||| | ||||  |||| ||| |||||| |||||||||||| |||||||||||||||    
T  31671092 ttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaa 31671165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 9763641 - 9763568
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||||||||| | |||||||||| ||||||| || | |||||||||||||  || |||||||||||||||    
T  9763641 aaacagcttatgacacttttgataagct-tttttcaacttaatttcataagttctacaatatagcttatgaaaac 9763568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 836559 - 836632
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||||||||||||||| | || |||||||||||| || ||| |||||| | |  ||||||||||||    
T  836559 ttttcagctcattttcataagttccccaagatagcttatgaacacagctaatagctcataccaaaacaatttaa 836632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 1275250 - 1275134
Alignment:
Q  128 ttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctt 227  Q
    |||||||||||  ||| || |||||||||||||||| ||   || | |||||||||||| |||| |||||| |||| |  ||| | ||||||||| ||||    
T  1275250 ttgtttgggaggacttcttaaaacagcttatgacat-gtccttacgttgtttttcagcttatttccataagctctccaggataacatatgaaaacagctt 1275152  T
Q  228 atagcttacatgaaaaca 245  Q
    |||||||| |||||||||    
T  1275151 atagcttatatgaaaaca 1275134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 24476634 - 24476581
Alignment:
Q  198 gttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||| |||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  24476634 gttctccaaaatagcttatcaaaactgcttatcgcttatatgaaaataatttaa 24476581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 281866 - 281934
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaa 246  Q
    ||||||||| |||| ||| || ||||||  |||||||||||| || |||||||||||| ||||||||||    
T  281866 ttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaa 281934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 9912183 - 9912234
Alignment:
Q  151 cagcttatgacattgttgataagctgtttttcagctcattttcataagttctc 203  Q
    ||||||||||||||||| |||||||| |||| |||| ||||||||||||||||    
T  9912183 cagcttatgacattgttcataagctg-ttttgagcttattttcataagttctc 9912234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 2735150 - 2735068
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    |||| |||||||||||| || |||||||||||| | ||| ||||||||||||| |  || || |||||||||||| ||||||||    
T  2735150 aaacggcttatgacatttttcataagctgtttt-cggcttattttcataagttgttcaagattgcttatgaaaacagcttatag 2735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 8364994 - 8365081
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaatttagtttt 265  Q
    ||||||||| |||||||| ||||| | |  ||||||||||||||| | ||||| |||| || ||||||||| || |||||||| ||||    
T  8364994 ttttcagcttattttcatcagttcaccatgatagcttatgaaaacagtttataacttatataaaaacaattgaacttaatttactttt 8365081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 24982785 - 24982703
Alignment:
Q  149 aacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    |||||||||||||||| || || |||| ||||| |||| |   |||||||||||| |||||| ||||||||||| |||||||||    
T  24982785 aacagcttatgacatttttaatgagcttttttt-agcttaccctcataagttctccaaaataacttatgaaaacagcttatagc 24982703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 34910398 - 34910484
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||||||||||| || || |||||| | ||| | |||||||||||||| |||| || |||||| |||  |||||||||||    
T  34910398 aaacagcttatgacattgttcatgagttgttttcc-gcttactttcataagttctccaaaacagattatgagaacaacttatagctta 34910484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 160969 - 161007
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagctta 215  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  160969 tttttcagcttattttcataagttctctaatatagctta 161007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 6647463 - 6647395
Alignment:
Q  152 agcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||||||||| ||| ||||| |||||| || || ||||||||||| ||||||| |||||||||||||||    
T  6647463 agcttatgacat-gttcataagatgtttt-caacttattttcataagctctctaagatagcttatgaaaac 6647395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 9109245 - 9109326
Alignment:
Q  153 gcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||| |||||||| ||||| |||||| || || ||||||||| |||||| ||| ||| | |||||||| ||||||||||||    
T  9109245 gcttataacattgttcataagttgtttt-caccttattttcataggttctccaaattagttaatgaaaacagcttatagctta 9109326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 30533812 - 30533774
Alignment:
Q  207 aatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  30533812 aatagcttatgaaaactgcttataacttatatgaaaaca 30533774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 4246470 - 4246395
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    |||||||||||| || || ||||| ||| | |||| | |||||||||||||||| |||||||| ||| |||||||||    
T  4246470 ataagctgtttt-caacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaaca 4246395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 28641722 - 28641824
Alignment:
Q  131 tttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||| ||||||| |  ||||||||||| |||| ||| ||||||||||||| |||| ||||||||||| |||  | |||||||  ||||||| | |||||    
T  28641722 tttggcagagcttatgaaaacagcttataacat-gttcataagctgttttt-agcttattttcataagctctgcagaatagctattgaaaacagtttata 28641819  T
Q  231 gctta 235  Q
    |||||    
T  28641820 gctta 28641824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 31623701 - 31623617
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgaca 162  Q
    |||||| |||||| ||||||| ||||| | ||||| |||||||| ||| || |||||||||| ||| |  ||| |||||||||||    
T  31623701 tgtttgaattgacttatttgaatttatctactggcctaagttttttgaggtggtttgggagaacttctgaaaatagcttatgaca 31623617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 31624959 - 31625011
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||| |||||||||||||||| || |||||||| |||||  |||||||    
T  31624959 ttttcagcttattttcataagttctccaatatagcttacgaaaatggcttata 31625011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 32143913 - 32143989
Alignment:
Q  183 agctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||| |||||||| |||| | ||  |||| ||||||||||  |||||| ||||| |||||| |||||||||||||||    
T  32143913 agcttattttcattagttttttaggatagtttatgaaaacaacttatatcttacctgaaaataatttaatttaattt 32143989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 40682350 - 40682464
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||  |||||||||||| |||||| ||| |||||||||||||||| ||||| || |||||| || |||||||||||||||| || ||| ||    
T  40682350 taagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttg-ttttcaacttattttcataagttctc-aagatatct 40682447  T
Q  214 tatgaaaactgcttata 230  Q
    |||||||||||||||||    
T  40682448 tatgaaaactgcttata 40682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 18066209 - 18066107
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||||| | ||||||| |||| || || |||||| ||||||||| || ||||||||||||||| |||||||||||| |||||||||||    
T  18066209 aaacagcttatgacattgctcataagctatttt-caccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaat 18066111  T
Q  248 ttaa 251  Q
    ||||    
T  18066110 ttaa 18066107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 9174964 - 9174814
Alignment:
Q  80 tttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgttt 179  Q
    |||||||| || |||||||| |||| |  |||| |||||| |||||   |||||| | | ||||||| ||||| |||||||||||||| ||||||| |||    
T  9174964 tttggatttacttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataagctattt 9174865  T
Q  180 ttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    | ||||| ||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  9174864 t-cagcttattttcataagctctgtaagatagcttatgaaaacagcttatag 9174814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 26626950 - 26626852
Alignment:
Q  152 agcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||||||| |||| ||||||| ||| | |||||||||||||||  || ||||||||||||||| |||| ||||||| | |||||||||||||    
T  26626950 agcttatgacattgttcataatctgtttt-caggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacgaaaacaatttaa 26626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 22681190 - 22681274
Alignment:
Q  164 tgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||| ||||||||||||| |||| |||| |||||||||||||  |||| |||||||||| |||||||||||| |||||||||||||    
T  22681190 tgttcataagctgttttt-agcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaattt 22681274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 1625977 - 1625879
Alignment:
Q  152 agcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||||| |||| ||||| |||||| ||||| |||||| ||||||||| || |||||||||||||||  |||||| |||| | |||||||||||||    
T  1625977 agcttatgacaatgttcataagatgtttt-cagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaa 1625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 680583 - 680483
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||| ||| |||| ||||||| ||||| ||||||| |||||||  || ||||||||||||||  |||||||||||| | |||||||||    
T  680583 aaacagcttatgacat-gtttataaactgtttt-cagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaacaat 680486  T
Q  248 tta 250  Q
    |||    
T  680485 tta 680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 2416469 - 2416292
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| ||||| ||||||| ||||||||||||| | ||  | ||||||||||||   || |||| ||| ||| || ||||||||| || ||||||| | ||    
T  2416469 gggcatgtttagattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcacaa 2416370  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||  ||| ||||  | ||||||||||||||| | ||| ||||| ||||| |||||||||||| || ||||||||||||    
T  2416369 gctaattt-cagcatactttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaacaatttaa 2416292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 9395211 - 9395110
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||| | ||||| |||||||||||| ||||| ||||||||||| |||  | |||| || |||||||| |||||||| ||| |||||||||||    
T  9395211 aaacagcttatgtcgttgtttataagctgtttt-cagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaacaat 9395113  T
Q  248 tta 250  Q
    |||    
T  9395112 tta 9395110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 40279278 - 40279162
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||| |||||| ||||||| |||| || |||| ||||| |||||||||||||||| || |||||||||||||||  |||||| |||| |  ||||||||    
T  40279278 aaacaacttatggcattgttcataaactatttt-cagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaaaacaat 40279180  T
Q  248 ttaatttaatttagtttt 265  Q
    |||| || |||| |||||    
T  40279179 ttaacttcattttgtttt 40279162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 4607040 - 4606938
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||   | ||||||||| |||||  ||||| |||||||||||||| || ||||| |||| |||| |||||||||||||||| || ||||||    
T  4607040 taagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgctttt-agcttattttcataagttctccaagatagct 4606942  T
Q  214 tatg 217  Q
    ||||    
T  4606941 tatg 4606938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 29316765 - 29316866
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||| ||| ||||| | |||| ||||| |||| ||||||||||| || |||||| |||||||| |||||||| |||  ||||||||||    
T  29316765 aaacagcttatgacat-gttcataagttctttt-cagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaat 29316862  T
Q  248 ttaa 251  Q
    ||||    
T  29316863 ttaa 29316866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 33942224 - 33942135
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    |||||||||| ||| |||||||||||| ||||| |||||||| || ||||||  || ||||||||||||  |||||||||||||||||||||    
T  33942224 cttatgacat-gttcataagctgtttt-cagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaaca 33942135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 36043985 - 36043883
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||| |||| ||||||||| ||||||||||||| |||||| ||||||||| |||| || ||| || ||||| || | |||||||||| | |||||||||    
T  36043985 aaacaacttacgacattgttcataagctgttttt-agctcaatttcataagctctccaagataactaatgaagacagtttatagcttatacgaaaacaat 36043887  T
Q  248 ttaa 251  Q
    ||||    
T  36043886 ttaa 36043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 40279348 - 40279275
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||| |||||| ||||||| |||| ||||||| ||||| |||||||||||||||| || |||||||||||||||    
T  40279348 aaacaacttatggcattgttcataaactgtttt-cagctaattttcataagttctccaatatagcttatgaaaac 40279275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 40279418 - 40279345
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||| |||||| ||||||| |||| ||||||| ||||| |||||||||||||||| || |||||||||||||||    
T  40279418 aaacaacttatggcattgttcataaactgtttt-cagctaattttcataagttctccaatatagcttatgaaaac 40279345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 13325685 - 13325569
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    |||||||| |||  ||||| |||||| ||| |  |||||||||||||||||    ||||||| |||||||||||||||||||||||||||| | | | ||    
T  13325685 taagttttatgagattgttcgggagaacttttgaaaacagcttatgacatttcacataagct-tttttcagctcattttcataagttctctgagaaaact 13325587  T
Q  214 tatgaaaactgcttatag 231  Q
    | |||||| |||||||||    
T  13325586 tctgaaaattgcttatag 13325569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 750807 - 750680
Alignment:
Q  92 tatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattt 191  Q
    ||||||||||||| | ||||| || |||||||||   ||||||  ||| ||| |  ||| |||| ||||||||||| ||||||||||||  |||| ||||    
T  750807 tatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttg-agcttattt 750709  T
Q  192 tcataagttctctaaaatagcttatgaaa 220  Q
     ||||||||||| || |||||||||||||    
T  750708 gcataagttctccaagatagcttatgaaa 750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 16451217 - 16451118
Alignment:
Q  130 gtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttat 229  Q
    |||||||||| ||| |  ||||| |||||||||||||| || ||||| ||||||||| |||||||  ||||||| || |||||||| |||||| ||||||    
T  16451217 gtttgggagaacttatgaaaacaacttatgacattgttcatgagctg-ttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttat 16451119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 45229586 - 45229519
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||||| || || |||| |||||||||| |||||||||||||||| || |||||||||||||||    
T  45229586 cttatgacatttttcattagct-tttttcagcttattttcataagttctcgaagatagcttatgaaaac 45229519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 8017476 - 8017413
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||||||| || ||||||||||||||| | ||| |||||| ||||||| |||||||    
T  8017476 attttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaa 8017413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 10646307 - 10646350
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  10646307 ttttcatcttattttcataagttctctaaaatagcttatgaaaa 10646350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 11513950 - 11513879
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||| |||| || |||||||| |  |||||||||||||||  ||||||||||| |||||||||||||    
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaattt 11513879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 33319784 - 33319883
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||||| ||| |  ||| |||||||||||||  | ||||||| |||||||||| |||||||||||||||| || |||| |||||||||| | |||    
T  33319784 tgtttgggagaacttttataaatagcttatgacatt--taataagct-tttttcagcttattttcataagttctccaagatagtttatgaaaacagttta 33319880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 36114519 - 36114429
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaa 220  Q
    ||||||||||| |||||| ||||| || |||| |||||| | ||||||||||| |||| ||||| ||||| |||| || |||||||||||||    
T  36114519 tgtttgggagaacttgttaaaacaactaatgaaattgttcaaaagctgttttt-agcttatttttataagatctccaagatagcttatgaaa 36114429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 3611307 - 3611234
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||| ||||||||||| || |||| |||||||| |||| |||||||||||||||| || ||||||| |||||||    
T  3611307 aaacaacttatgacattattcataaactgttttt-agcttattttcataagttctccaagatagcttgtgaaaac 3611234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 6167306 - 6167372
Alignment:
Q  183 agctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||| |||| ||||||||||| |||||||||||| ||||| |||||||||||| | |||| ||||||    
T  6167306 agcttatttccataagttctccaaaatagcttataaaaacagcttatagcttaaacgaaagcaattt 6167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 12464490 - 12464564
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||| ||||||| |||||||| || ||||||||||||||  ||||||||| || |  ||||||||||||    
T  12464490 tttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaa 12464564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 33256837 - 33256725
Alignment:
Q  131 tttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||||||| |  |||||||||||||||| ||| |||| ||||| | ||||| ||||||||| | |||  |  || ||||||||||||||||||||    
T  33256837 tttgggagagcttatgaaaacagcttatgacat-gttcataaactgttct-cagcttattttcatacggtcttcaggatggcttatgaaaactgcttata 33256740  T
Q  231 gcttacatgaaaaca 245  Q
    | ||| |||||||||    
T  33256739 gtttatatgaaaaca 33256725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 43279518 - 43279616
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||| | || ||||||| ||||||| || ||||||| |||||||| || ||||||||| |||||  |||||||| ||||  ||||||||    
T  43279518 aaacagcttatgacaattttcataagct-tttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagcataca--aaaacaat 43279614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 18179258 - 18179323
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||||| |||||| ||||||||| |  ||||||||||||| | |||||||||||| |||||||    
T  18179258 ttttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaa 18179323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 25800851 - 25800810
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  25800851 atagcttatgaaaacagcttatagcttatatgaaaacaattt 25800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 28039336 - 28039420
Alignment:
Q  163 ttgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||| |||||||||||| ||||| |||| ||||| || || || | |||||||||||| ||||||||| ||| ||||||||||||    
T  28039336 ttgttcataagctgtttt-cagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaacaatt 28039420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 42458000 - 42457927
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| ||||||||| ||||||||| |||||||||||| || ||| | |||||| |  ||||||||||||    
T  42458000 ttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaaacaaaaacaatttaa 42457927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 42621393 - 42621450
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| ||||||| |||||||| | |||| ||||||||||| ||||||||||||    
T  42621393 ttttcagcttattttcacaagttctccagaataacttatgaaaacagcttatagctta 42621450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 42419942 - 42419858
Alignment:
Q  80 tttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacatt 164  Q
    ||||||||||| ||||||||||||| ||||| | |||||||| |||   ||||||||||| |||    |||||||||||||||||    
T  42419942 tttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatt 42419858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 42592358 - 42592310
Alignment:
Q  211 gcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||||||||| |||||||||||| |||||||||| |||| |||||||    
T  42592358 gcttatgaaaacagcttatagcttatatgaaaacaagttaacttaattt 42592310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 938538 - 938593
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||| ||| ||||||| |||||||||||| || |||||||||||| |||||||    
T  938538 attttcagaagctctctaagatagcttatgaataccgcttatagcttatatgaaaa 938593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 16398189 - 16398123
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    |||||||||||| |  ||||||||||| ||||| |||||||||||||||| || ||| ||||||||||    
T  16398189 cttatgacattgctcgtaagctgtttt-cagcttattttcataagttctccaacataacttatgaaaa 16398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 35378993 - 35379078
Alignment:
Q  135 ggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| |  |||||||| ||||| ||||| ||||| |||||| ||||| ||||||||||| |||| || |||||||||||||||    
T  35378993 ggagagcttatgaaaacagctgatgac-ttgttcataagttgtttt-cagcttattttcataagctctccaagatagcttatgaaaac 35379078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 41812006 - 41812113
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||||||||||||||| | |||||||| |||| | | | |  |||||| |||| | ||||||||||| ||| |  ||||||||||||||||| || ||||    
T  41812006 gggcttgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataa 41812105  T
Q  173 gctgtttt 180  Q
    ||| ||||    
T  41812106 gctttttt 41812113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 42419859 - 42419820
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttat 216  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  42419859 tttttcagcttattttcataagttttctaaaatagcttat 42419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 6227788 - 6227722
Alignment:
Q  193 cataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||| |||| ||||||||||||||||||  ||||||| ||| || |||||  |||||||||||||    
T  6227788 cataagctctccaaaatagcttatgaaaaccacttatagtttatataaaaacggtttaatttaattt 6227722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 14220811 - 14220864
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttct 202  Q
    |||| ||||||||||||||| |||||||  ||||||||| |||||||||||||||    
T  14220811 aaacggcttatgacattgtttataagct-cttttcagcttattttcataagttct 14220864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 15377826 - 15377748
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||| ||||| || | ||||||||||| ||   | |||||||||||||||| ||||||| |||| |||||||||||    
T  15377826 ataagctatttttaagtttattttcataagctcctcagaatagcttatgaaaacagcttataacttatatgaaaacaat 15377748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 26143658 - 26143708
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||| |||||||||||||||| ||  |||||||||||||| |||||    
T  26143658 ttttcagcttattttcataagttctccaagttagcttatgaaaacagctta 26143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 44600616 - 44600534
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    |||||||||||||||||||| ||||||||||||| |  |  ||||| ||||||||| || || |||| | ||||| |||||||    
T  44600616 aaacagcttatgacattgttcataagctgtttttgacttgtttttcgtaagttctcgaagattgctttttaaaacagcttata 44600534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 7928287 - 7928351
Alignment:
Q  148 aaacagcttatg-acattgttgataagctgtttttcagctcattttcataagttctctaaaatagc 212  Q
    |||||||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| || |||||    
T  7928287 aaacagcttatggacattgttcataagttgtttt-cagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 13736321 - 13736366
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagct 233  Q
    ||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  13736321 attttcataagctctctagtatagcttatgaaaacagcttatagct 13736366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 13869123 - 13869184
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||||| ||||||| |  ||| ||||||||||| |||||||||||| ||||||| |||||    
T  13869123 attttcattagttctccaggataacttatgaaaacagcttatagcttagatgaaaataattt 13869184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 35755554 - 35755591
Alignment:
Q  212 cttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||||||||  |||||||||||||||||||||||||    
T  35755554 cttatgaaaacaacttatagcttacatgaaaacaattt 35755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 450003 - 449895
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| |||||| ||| || |||||||| |||| | || || |||||||| |||  |||||||||||  ||| |  ||||||||||||||||| || ||||    
T  450003 gggcatgtttgcattaacttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataa 449904  T
Q  173 gctgttttt 181  Q
    ||| |||||    
T  449903 gctattttt 449895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 1647316 - 1647250
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||||||||||||||| || | |||||||| ||||||||| |||| |||||| |||||| ||||||||||    
T  1647316 aaacagcttatgaca-tgctcataagctg-ttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 1893299 - 1893355
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctt 234  Q
    ||||||||| ||||||| |||||||| || |||||||  |||||| |||||||||||    
T  1893299 ttttcagcttattttcacaagttctccaagatagcttccgaaaacagcttatagctt 1893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 3312233 - 3312181
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtga 125  Q
    |||||||||||||||| | |||||||| |||| | ||| ||||||||||||||    
T  3312233 gggcttgtttggattggcttatttgagcttatctactgacgtaagttttgtga 3312181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 5759546 - 5759660
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||||||||| |  |||||||||| ||||| ||  ||||| ||| |||||||| ||||||| ||   ||| | |||||||||||||||| |||||    
T  5759546 tgtttgggagagcttatggaaacagctta-gacat-gtccataagttgtgtttcagcttattttcacaaaccctccagaatagcttatgaaaacagctta 5759643  T
Q  229 tagcttacatgaaaaca 245  Q
    |||| || | |||||||    
T  5759644 tagcatatacgaaaaca 5759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 15978037 - 15977993
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| ||||||||||  |||| ||||||||||||||||||    
T  15978037 ttttcagcttattttcataatctctccaaaatagcttatgaaaac 15977993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 29300667 - 29300627
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    |||||||||||||||  |||||| |||||||||||||||||    
T  29300667 atagcttatgaaaacaacttataacttacatgaaaacaatt 29300627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 33931609 - 33931645
Alignment:
Q  199 ttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  33931609 ttctccaaaatagcttatgaaaacagcttatagctta 33931645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 35993398 - 35993442
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| ||||||||||||||||||  |||||||||| ||||    
T  35993398 ttttcagcttattttcataagttctctatgatagcttatgcaaac 35993442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 40279459 - 40279415
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||| || |||||||||||||||| || |||||||||||||||    
T  40279459 ttttcaacttattttcataagttctccaatatagcttatgaaaac 40279415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 21367816 - 21367646
Alignment:
Q  80 tttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgttt 179  Q
    ||||||||| | |||||||| |||| | |  || |||||||||||    ||||||||||| ||| |  |||||||||||||||||||| | |||||||||    
T  21367816 tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttt 21367717  T
Q  180 ttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    | ||||| |||||||||||||||| || |||||||||||||||  ||||||  ||| | |||||||||||||    
T  21367716 t-cagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaa 21367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 402531 - 402633
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||||||| |||||||| ||||||||| | ||||| |||||||  || |||| |||| ||||| ||||||| |||| | |||||||||    
T  402531 aaacagcttatgacattgttcataagctg-ttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaacaat 402629  T
Q  248 ttaa 251  Q
    ||||    
T  402630 ttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 1217790 - 1217891
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||| ||  ||||| |||||| || || | |||||||||||||| |  ||||||||||||||| ||||||| ||||||||||||||||    
T  1217790 aaacagcttatgacat-gtccataagttgtttt-catcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaat 1217887  T
Q  248 ttaa 251  Q
    ||||    
T  1217888 ttaa 1217891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 30443993 - 30443891
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||| ||||||| |  ||||||||||||||| | || | ||||| |||||||||| |||||||||||||||| || |||| |||| ||||| |||||    
T  30443993 tgtttggtagagcttatgaaaacagcttatgacaattttcacaagct-tttttcagcttattttcataagttctccaatatagtttataaaaacagctta 30443895  T
Q  229 tagc 232  Q
    ||||    
T  30443894 tagc 30443891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 44488935 - 44488864
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaact-gcttatagcttacatgaaaacaatt 248  Q
    ||||||||| |||| |||||||||||||| |||||||||||||| | |||||||||||||||  ||||||||    
T  44488935 ttttcagcttatttccataagttctctaagatagcttatgaaaaatagcttatagcttacattgaaacaatt 44488864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 28622009 - 28622090
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||| ||| | |||||||||||||||| || |||| |||||||||| ||||||||||||||  ||||||| ||||    
T  28622009 ataagctgtttt-caggttattttcataagttctcgaagatagtttatgaaaacagcttatagcttacacaaaaacaacttaa 28622090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 33405197 - 33405258
Alignment:
Q  190 tttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||||  || ||||||||||||||| |||||||||||| |||||||||| ||||    
T  33405197 tttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaa 33405258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 34610778 - 34610866
Alignment:
Q  131 tttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaa 220  Q
    ||||||||| ||| |  |||| ||||||||||||||| ||||| || ||||||||| |||||||||||||| | || |||||||||||||    
T  34610778 tttgggagaacttatgaaaactgcttatgacattgttcataag-tggttttcagctgattttcataagttcgccaagatagcttatgaaa 34610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 50600196 - 50600253
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||||||||||||||| || |||||| |||||||| ||||||||||||    
T  50600196 ttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagctta 50600253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 20880557 - 20880455
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||| | || ||||||| ||||| |||| |||||||||||||||| || ||||||| | ||||| | ||||||| || |  ||||||||    
T  20880557 aaacagcttatgacaattttcataagct-tttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaat 20880459  T
Q  248 ttaa 251  Q
    ||||    
T  20880458 ttaa 20880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 36507107 - 36507166
Alignment:
Q  176 gtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||||| ||||| |||| ||||| ||||||| |||||||| ||||||||||||||    
T  36507107 gtttttcagcttatttttataaattctccaaaatagtttatgaaagctgcttatagctta 36507166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 39602168 - 39602285
Alignment:
Q  116 agttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagctta 215  Q
    |||||||||| | | ||||| ||||||| |  | |||||||||||||| ||| ||||  |||||| || || |||||||||||||||| || ||||||||    
T  39602168 agttttgtgaggctatttggaagagcttatgaagacagcttatgacat-gttcataaattgtttt-caacttattttcataagttctcaaagatagctta 39602265  T
Q  216 tgaaaactgcttatagctta 235  Q
    ||||||| ||||||| ||||    
T  39602266 tgaaaacagcttataactta 39602285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 2719517 - 2719463
Alignment:
Q  181 tcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||| |||||||||||||||| || ||||||||||||||| | ||||||||||    
T  2719517 tcagcttattttcataagttctccaagatagcttatgaaaacagtttatagctta 2719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 36783339 - 36783452
Alignment:
Q  164 tgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaatttagtt 263  Q
    |||| |||||||||||| ||||| || ||||||| | ||| || ||||||||||||||| ||| |||| ||| |||||||||||||    || |||| ||    
T  36783339 tgttcataagctgtttt-cagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaacaattt----tacttta-tt 36783432  T
Q  264 ttagcttttggtatagaaat 283  Q
    ||| ||||||||||||||||    
T  36783433 ttatcttttggtatagaaat 36783452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 53789450 - 53789555
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    ||||||||||||||| | || ||||||| |||||||||| | |||||||||||||| |  ||||||||||| |||  |||||||| || |  |||||| |    
T  53789450 aaacagcttatgacacttttcataagct-tttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatataccaaaacatt 53789548  T
Q  248 ttaattt 254  Q
    |||||||    
T  53789549 ttaattt 53789555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 2923499 - 2923454
Alignment:
Q  209 tagcttatgaaaactgcttatagcttacatgaaaacaatttaattt 254  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||    
T  2923499 tagcttatgaaaacagcttatagcttacatgaaagcaatttgattt 2923454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 32582797 - 32582740
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctt 234  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||| |||| ||||||    
T  32582797 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 32582740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 44747427 - 44747480
Alignment:
Q  179 tttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    |||||||| ||||||||||||| || || ||||||||||||||| |||||||||    
T  44747427 tttcagcttattttcataagttttccaagatagcttatgaaaacagcttatagc 44747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 33883768 - 33883812
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||||    
T  33883768 ttttcagcttattttcataagttctctaagatagcttatgtaaac 33883812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 14548692 - 14548805
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    |||||| |||||||| |  ||||| | ||||||||| || ||| |||||||| ||||| |||| |||||| |||| | |||| |||||||||||  ||||    
T  14548692 tgtttgagagagcttatgaaaacaacgtatgacatt-ttaataggctgtttt-cagcttatttccataagctctccagaataacttatgaaaacaactta 14548789  T
Q  229 tagcttacatgaaaac 244  Q
    ||||||| ||||||||    
T  14548790 tagcttatatgaaaac 14548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 31365111 - 31365225
Alignment:
Q  82 tggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgttttt 181  Q
    ||||||| | |||||||| |||| |  |||| ||||||||||||   ||||||||||| ||| |  || |||||||||||| | || ||||||| |||||    
T  31365111 tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagct-ttttt 31365209  T
Q  182 cagctcattttcataa 197  Q
    || |||||||||||||    
T  31365210 caactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 34924556 - 34924599
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  34924556 ttttcagcttattttcataagctctctaagatagcttatgaaaa 34924599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 35394494 - 35394560
Alignment:
Q  155 ttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||||||| |||||||| |||||| || |||||||||| ||||  || |||||||||||||||    
T  35394494 ttatgacattgttcataagctg-ttttcaacttattttcataaattcttcaagatagcttatgaaaac 35394560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 41633412 - 41633361
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttat 229  Q
    ||||||||| ||||||||||| |||| ||||||||| |||||||| ||||||    
T  41633412 ttttcagcttattttcataagctctccaaaatagctgatgaaaacagcttat 41633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 44061034 - 44061114
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||||||  |||| | ||||||||||||||||| ||| | |||||||||  ||||||||||| |  ||||||||||||    
T  44061034 ataagctgtttt--agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaa 44061114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 52440656 - 52440761
Alignment:
Q  152 agcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||| ||| ||||| |||||| || || |||||||||||||||  || |||  |||||||||  ||||||||||||  |||||||||||| |    
T  52440656 agcttatgacat-gttcataagttgtttt-caactaattttcataagttcttcaagataaattatgaaaatagcttatagcttatttgaaaacaatttga 52440753  T
Q  252 tttaattt 259  Q
    ||| ||||    
T  52440754 tttgattt 52440761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 28795871 - 28795909
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  28795871 ttttcagcttattttcataagttctctaatatagcttat 28795909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 39980880 - 39980727
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||| | | |||||| |||| | || || ||||||||||||   |||||  |||| ||| |  ||||||||||||||    || ||||||| |    
T  39980880 tgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagct-t 39980782  T
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    |||||| || |||||||||||||||| || ||||||||| |||||  ||||||||    
T  39980781 ttttcaacttattttcataagttctccaatatagcttataaaaacaacttatagc 39980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 41057060 - 41057014
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaatttaattt 254  Q
    |||||||||||||||  ||||||||||| |||||||||| |||||||    
T  41057060 atagcttatgaaaacaacttatagcttatatgaaaacaaattaattt 41057014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 46031071 - 46030970
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacat-gaaaacaa 246  Q
    ||||||| ||||||||| || |||||||| ||||||||| ||||| |||||||||| || |||| ||||  |||| ||||| || ||| || ||||||||    
T  46031071 aaacagcctatgacattattcataagctg-ttttcagcttattttaataagttctccaagatagtttattgaaacagcttacaggttatatggaaaacaa 46030973  T
Q  247 ttt 249  Q
    |||    
T  46030972 ttt 46030970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 49092820 - 49092750
Alignment:
Q  189 ttttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||||||||||||||| ||||||||| |||||  |||| ||| || | || || |||||||||||||||    
T  49092820 ttttcataagttctctaatatagcttataaaaacaacttacagcatatacgagaataatttaatttaattt 49092750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 52619055 - 52618973
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattta 260  Q
    |||||| || ||||||| ||| |||  || ||||||| ||||||| ||||||| |||| ||||||||||||||| || |||||    
T  52619055 ttttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaatttaactttattta 52618973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 466274 - 466202
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||||||||| | ||||| ||  |||||| ||||| |||| |||||||||||||||| || ||||||||||||||    
T  466274 aaacagcttttaacatttttcttaagcttttttt-agcttattttcataagttctccaacatagcttatgaaaa 466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 3845579 - 3845624
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||||||| |||||||||||||||| || ||| |||||||||||    
T  3845579 tttttcagcttattttcataagttctccaagataacttatgaaaac 3845624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 20669671 - 20669598
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||| | |||||||  || ||||||| |||| ||||||||||   |||||||||| |||||||||||||||    
T  20669671 ttttcagtttattttcaggagctctctaagatagtttatgaaaacgaattatagcttatatgaaaacaatttaa 20669598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 21335722 - 21335677
Alignment:
Q  183 agctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    |||| ||||||||||||||||||  ||||||||||||||| |||||    
T  21335722 agcttattttcataagttctctagtatagcttatgaaaacagctta 21335677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 23315676 - 23315607
Alignment:
Q  180 ttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||| |||| |||||| ||| || ||||||||||| ||||  |||||||| || |||||||||||||    
T  23315676 ttcagcttatttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaattt 23315607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 33972751 - 33972796
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||||||| ||||||| |||||||| |||||||||||| |||||    
T  33972751 tttttcagcttattttcacaagttctccaaaatagcttataaaaac 33972796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 37273233 - 37273142
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||||||||| |  ||||| |||||||||| ||  ||||| |||||| || || |||| ||||||||||| || |||||||||||||||    
T  37273233 tgtttgggagagcttatggaaacaacttatgacat-gtccataagttgtttt-caacttatttccataagttctccaagatagcttatgaaaac 37273142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 45541651 - 45541580
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    |||||||||||||||| ||| |||||||||||| ||| | ||| ||||||||| || || ||||||||||||||    
T  45541651 aaacagcttatgacat-gttcataagctgtttt-caggttattctcataagttatccaagatagcttatgaaaa 45541580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 46886720 - 46886765
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagct 233  Q
    ||||||| |||||||| || ||||||||||||||| ||||||||||    
T  46886720 attttcaaaagttctccaagatagcttatgaaaacagcttatagct 46886765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 20874352 - 20874392
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||||||||||||| |||||||| ||| ||||||||||||    
T  20874352 atagcttatgaaaacagcttatagtttatatgaaaacaatt 20874392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 24085258 - 24085393
Alignment:
Q  79 gtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtt 178  Q
    |||||||||| | |||||||| |||| | | ||| ||||||||||||   || || ||||| ||| |  ||||||||||||  | |||| ||| |||| |    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctg-t 24085356  T
Q  179 tttcagctcattttcataagttctctaaaatagctta 215  Q
    |||||||| ||||||| |||||||| || ||||||||    
T  24085357 tttcagcttattttcacaagttctccaagatagctta 24085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 25075118 - 25075066
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||| |||||||| |||||||||  ||||||||||||||  |||||||    
T  25075118 ttttcagcttattttcattagttctctatgatagcttatgaaaagagcttata 25075066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 45083246 - 45083218
Alignment:
Q  76 cttgtttggattgacatatttgagtttat 104  Q
    |||||||||||||||||||||||||||||    
T  45083246 cttgtttggattgacatatttgagtttat 45083218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 1930150 - 1930035
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||  || ||||||||| |||||  |||||| ||||||||||||| |||||||| ||||||||| ||||||| ||| || | || ||||||    
T  1930150 taagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctg-ttttcagcttattttcacaaggtcaccaagatagct 1930052  T
Q  214 tatgaaaactgcttata 230  Q
    ||||||||| |||||||    
T  1930051 tatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 27028968 - 27028829
Alignment:
Q  92 tatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattt 191  Q
    |||||||||||||   ||||| ||||||| ||||  ||||||||||||  || |  |||||||||| |||||| || ||||||| |||| ||||| ||||    
T  27028968 tatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctatttt-cagcttattt 27028870  T
Q  192 tcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    ||||||| |||| || ||||||||||||||| |||||||||    
T  27028869 tcataagctctccaagatagcttatgaaaacagcttatagc 27028829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 7514678 - 7514560
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||||| |||||  || ||||| || |||||||| |||||||||||  || || |||||||  ||||||  |||||||||||||||||| ||||     
T  7514678 tgtttgggagaacttgtgaaagcagctgataacattgttcataagctgtttc-caactaattttcactagttctgcaaaatagcttatgaaaacagcttg 7514580  T
Q  229 tagcttacatgaaaacaatt 248  Q
    ||||||| ||||||||||||    
T  7514579 tagcttatatgaaaacaatt 7514560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 38874706 - 38874627
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||| ||||| |||| ||||||||| |||||| |||||||||||||||||| ||||| |||||| ||||||| |||||    
T  38874706 ataagctattttt-agcttattttcatatgttctccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 38874627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 18133771 - 18133655
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||   |||||||||||||||||  || |||||||| ||| | || | ||||| |||||||||| |||||||||||||||| || |||| |    
T  18133771 taagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagct-tttttcagcttattttcataagttctccaatatagtt 18133673  T
Q  214 tatgaaaactgcttatag 231  Q
    ||| ||| | ||||||||    
T  18133672 tataaaaccagcttatag 18133655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 26771380 - 26771244
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||   ||||||||||| ||| |  ||||||||||||||| | || | ||||  ||||||| || ||||||||||||||||||| ||| ||    
T  26771380 taagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcc-tttttcaacttattttcataagttctctaatatatct 26771282  T
Q  214 tatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||| ||||  ||||||||| || |  ||||||||||||    
T  26771281 tataaaaaaagcttatagcatatacaaaaacaatttaa 26771244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 30251368 - 30251524
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| ||||||||||| | |||||||| |||| | ||| | ||||||| ||||   ||||||||||| |||    |||||||||||  |||| || ||||    
T  30251368 gggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataa 30251467  T
Q  173 gctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||| |||| ||||| ||||||||||||  || || ||||||||||||||| |||||||    
T  30251468 gct-ttttacagcttattttcataagtggtccaagatagcttatgaaaacagcttata 30251524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 30389151 - 30389070
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    ||||||||| ||||||||||||||||||  | ||||||||||||| || ||||||||| || ||| |||| |||||| ||||    
T  30389151 ttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttatataaaagcaatctaatttcattt 30389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 27754454 - 27754386
Alignment:
Q  180 ttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||  ||||||| | ||||||||| ||||    
T  27754454 ttcagcttattttcataagctctccaaaatagcttatgaaaaccacttatagttaacatgaaaataatt 27754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 39268512 - 39268592
Alignment:
Q  168 gataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||||||||||||||| | |||| |||||| |||||| || ||||||||||||| |||| || |||| ||||||| ||||    
T  39268512 gataagctgtttttcagtttatttccataagctctctagaaaagcttatgaaaacagcttttaacttatatgaaaataatt 39268592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 8062572 - 8062505
Alignment:
Q  182 cagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||| ||||||||||  ||||||| ||||||||||| |||  ||||||||||| |||||||||||||    
T  8062572 cagcttattttcataaactctctaagatagcttatgagaacatcttatagcttatatgaaaacaattt 8062505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 10120837 - 10120735
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 247  Q
    |||||||||||||||||  | ||| |||||||| ||||| |||||||||||||||| || |||| | ||| |||| |||||||| ||| |  ||||||||    
T  10120837 aaacagcttatgacatttatcatatgctgtttt-cagcttattttcataagttctccaatatagttaatgtaaacagcttataggttataccaaaacaat 10120739  T
Q  248 ttaa 251  Q
    ||||    
T  10120738 ttaa 10120735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 1113139 - 1113058
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||||  |||||||| ||||||||||||| |||| |||||||||||||||| || ||||  |||| |||| |||||||    
T  1113139 aaacagcttaaaacattgttcataagctgttttt-agctaattttcataagttctccaagatagtgtatgtaaacagcttata 1113058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 10114541 - 10114471
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||||||| ||||||||| |||||| || |||||| |||||||| |||||||||||| |  |||||||||    
T  10114541 ttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaatt 10114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 35534526 - 35534675
Alignment:
Q  72 ggggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgata 171  Q
    ||||| ||||| || |||| |||||||| |||| | ||  | ||||||||||||   |||||| |||| |||||  ||||||||||||||| | || | |    
T  35534526 ggggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaaca 35534625  T
Q  172 agctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||| |||||| ||| | |||||||||||||| || ||| |||||||||||    
T  35534626 agct-tttttcggcttactttcataagttctccaatataacttatgaaaac 35534675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 37353267 - 37353349
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattta 260  Q
    ||||||| | ||||||||||| |||| || |||||||| |||||| ||||||||| ||||  |||||||||||| || |||||    
T  37353267 ttttcagattattttcataagctctcaaagatagcttaagaaaacagcttatagcatacacaaaaacaatttaactttattta 37353349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 8062381 - 8062324
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||| |||||  ||||||| ||||||||||||||| ||||||||||||    
T  8062381 ttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagctta 8062324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 28769357 - 28769414
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||| |||||  |||| |||||||||||||||||| ||||||||||||    
T  28769357 ttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagctta 28769414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 31804484 - 31804545
Alignment:
Q  190 tttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||| || |||||| |||||||||||||||| |||| | |||||||||||||    
T  31804484 tttcataagctctcaaagatagctcatgaaaactgcttataacttataggaaaacaatttaa 31804545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 7645999 - 7645959
Alignment:
Q  209 tagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  7645999 tagcttatgaaaacaacttatagcttacatgaaaacaattt 7645959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 27493093 - 27492970
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataa 172  Q
    |||| |||||||||| || |||||||| |||| | ||||  |||||||||| || || ||||||||||||| |  |||||  || |||||||||| ||||    
T  27493093 gggcctgtttggattaacttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaacaagttgtgacattgttcataa 27492994  T
Q  173 gctgtttttcagctcattttcataa 197  Q
    |||  |||||| || ||||||||||    
T  27492993 gct-attttcaacttattttcataa 27492970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 11795144 - 11795077
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    ||||||||| |||| |||||| |||| | |||||||||||||| | ||||||| |||| |||||||||    
T  11795144 ttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaaca 11795077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 29168027 - 29168129
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||||| ||| |  |||||| |||||||||| || ||||  ||||| |||||| |||| ||||||||||| || |||||| | |||||| |||||    
T  29168027 tgtttgggagaacttataaaaacagattatgacatttttcataaa-tgtttctcagcttatttccataagttctccaagatagctcaggaaaacagctta 29168125  T
Q  229 tagc 232  Q
    ||||    
T  29168126 tagc 29168129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 201
Target Start/End: Complemental strand, 33808453 - 33808332
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    ||||||||||||| |||| ||| |||| |  |||| |||||||| ||   |||||||||||| ||| |  ||| ||||||||| |||||| ||||| |||    
T  33808453 tgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagttgt 33808355  T
Q  178 ttttcagctcattttcataagttc 201  Q
    |||| |||| ||||||||||||||    
T  33808354 tttt-agcttattttcataagttc 33808332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 43504817 - 43504747
Alignment:
Q  163 ttgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctt 234  Q
    ||||| |||||||||||| ||||| |||| ||||||||||| || ||||||||| |||||  ||||||||||    
T  43504817 ttgtttataagctgtttt-cagcttatttccataagttctccaagatagcttataaaaacatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 8909067 - 8909029
Alignment:
Q  213 ttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  8909067 ttatgaaaactgtttatagcttatatgaaaacaatttaa 8909029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 11376755 - 11376685
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    ||||||||| |||||||||  ||||||||||||||||| |||| |  ||||||||||| || |||| ||||    
T  11376755 ttttcagcttattttcatagattctctaaaatagcttaagaaagcatcttatagcttatatcaaaataatt 11376685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 12361215 - 12361173
Alignment:
Q  207 aatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||| ||||||||||| |||||||||||| |||||||||||||    
T  12361215 aataacttatgaaaacagcttatagcttatatgaaaacaattt 12361173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 31751546 - 31751595
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataag 198  Q
    |||||||||||||||||||| |||||||  ||||||||| |||||||||||    
T  31751546 aaacagcttatgacattgttcataagct-attttcagcttattttcataag 31751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 31862553 - 31862488
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||| ||||| ||||||||||| ||||||  ||| |||||||||||  |||||||||||    
T  31862553 ataagctgtttt-cagcttattttcataagctctctaggataacttatgaaaacatcttatagctta 31862488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 38602483 - 38602417
Alignment:
Q  73 gggcttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggaga 139  Q
    |||| ||||||||||||| |||||||| |||| | ||| | |||||||||||| | |||||||||||    
T  38602483 gggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggaga 38602417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 43717947 - 43718012
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||||||| |||| | |||||||||||||| || |||||||||| |||| ||||||| ||||    
T  43717947 ataagctgttttt-agcttactttcataagttctccaagatagcttatgcaaacagcttataactta 43718012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 778429 - 778368
Alignment:
Q  190 tttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||| || |  |||||||||||| |||||||||| | |||||||||||||||    
T  778429 tttcataagctctccaacaatgcttatgaaaacagcttatagctaaaatgaaaacaatttaa 778368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 1433600 - 1433543
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||| || ||||||||||| |||| |  ||||||||||||||||||||| ||||||    
T  1433600 ttttcaacttattttcataagctctccaggatagcttatgaaaactgcttaaagctta 1433543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 6864477 - 6864542
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaa 243  Q
    ||||||||| |||| |  ||| |||| ||||||||||||||||||  |||||| ||||||||||||    
T  6864477 ttttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataacttacatgaaaa 6864542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 7918791 - 7918864
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||| || ||| |||  || |||||||||||||||  ||||||||||||| ||||| |||||||    
T  7918791 ttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaa 7918864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 9834837 - 9834878
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||||||||||||  ||||||||||| |||||||||||||    
T  9834837 atagcttatgaaaacaacttatagcttatatgaaaacaattt 9834878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 9956832 - 9956889
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||||||||||||||| || |||| ||||||||||  |||||| ||||    
T  9956832 ttttcagcttattttcataagttctccaagatagattatgaaaacaacttataactta 9956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 14247242 - 14247295
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    ||||||||| ||||||||||||||||||  ||| |||| |||||| ||||||||    
T  14247242 ttttcagcttattttcataagttctctacgatatcttacgaaaacagcttatag 14247295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 30013270 - 30013189
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    ||||||||| |||| ||| ||||||  |  ||||||||||||||| |||||||||||| ||| ||||| ||| | |||||||    
T  30013270 ttttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgacttaattt 30013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 31716216 - 31716284
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatg 217  Q
    ||||||||||||||||| || ||||||| |||||||||| ||||  |||| ||||| || ||||||||||    
T  31716216 aaacagcttatgacattcttcataagct-tttttcagcttatttctataacttctccaagatagcttatg 31716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 34770914 - 34770873
Alignment:
Q  208 atagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||||||||||||  ||||||||||| |||||||||||||    
T  34770914 atagcttatgaaaacaacttatagcttaaatgaaaacaattt 34770873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 42237452 - 42237513
Alignment:
Q  190 tttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||  |||| || ||||||| ||||||||  |||||||||| |||||||||||||||    
T  42237452 tttcataaactctcgaagatagcttgtgaaaacttattatagcttatatgaaaacaatttaa 42237513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 922325 - 922385
Alignment:
Q  78 tgtttggatt-gacatatttgagtttatattctggcgtaagttttgtgatgttgtttggga 137  Q
    |||||||||| ||| ||||||||||||||| ||| | |||||||||||||  |||||||||    
T  922325 tgtttggattagacttatttgagtttatatactgacctaagttttgtgatactgtttggga 922385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 3536934 - 3537001
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    |||||||||||||||||||| ||||  || ||||||||| |||| ||||||||||| || ||| |||||    
T  3536934 aaacagcttatgacattgttcataaattg-ttttcagcttatttccataagttctccaagatatcttat 3537001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 44236841 - 44236885
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  44236841 ttttcagcttattttcataagctctccaatatagcttatgaaaac 44236885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 232
Target Start/End: Complemental strand, 20526598 - 20526444
Alignment:
Q  77 ttgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctg 176  Q
    |||||||||||||| ||||||||||||| |  |||   || ||||||||   |||||| |||| ||| |  |||||| |||| ||||| ||  |||||||    
T  20526598 ttgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctg 20526499  T
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    ||||| |||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  20526498 ttttt-agcttattttcattagttctccaaaatagcttatgaaaacagcttatagc 20526444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 38010779 - 38010695
Alignment:
Q  164 tgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||| ||||||||||||| |||| |||| |||||||||||||  |||| |||||||||| |||||||||||| |||||||||||||    
T  38010779 tgttcataagctgttttt-agcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaattt 38010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 39968033 - 39967899
Alignment:
Q  116 agttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagctta 215  Q
    |||||||||||  || ||| |||| ||| |  |||||||||||| ||||||| |||||||| |||||| || |||||||| |||||||| | ||||||||    
T  39968033 agttttgtgattctggttgcgagaacttatgaaaacagcttatggcattgttcataagctg-ttttcaacttattttcattagttctctcagatagctta 39967935  T
Q  216 tgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||  |||||||||   | |||||||||||||    
T  39967934 tgaaaacaacttatagctagtacgaaaacaatttaa 39967899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 37064481 - 37064555
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| ||||||||| ||  | ||||||||||||    
T  37064481 tttttcagcttattttcataagtcctctaaaatagcttacgaaaacagcttatagcatatgtaaaaacaatttaa 37064555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 17248652 - 17248534
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||||| ||| |  ||||||||||| |||||||| |||||||| |||  | || ||||||||||||||||||| ||  ||||||||||  |||||    
T  17248652 tgtttgggagaacttataaaaacagcttataacattgttcataagctgattt--accttattttcataagttctctaagat--cttatgaaaagagctta 17248557  T
Q  229 tagcttacatgaaaacaatttaa 251  Q
    ||||||| |  ||||||||||||    
T  17248556 tagcttatacaaaaacaatttaa 17248534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 47177683 - 47177615
Alignment:
Q  183 agctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||| |||||||||| ||||| || ||||||| ||||||| |||||||||||| |||||||||||||||    
T  47177683 agcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaa 47177615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 45593680 - 45593525
Alignment:
Q  78 tgtttggattgacatatttgagtttatatt-ctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctg 176  Q
    ||||||||||| | |||||||||||||||| ||| | |||| |||||||   ||||||||||| ||| |  ||||| || |||||||| || |||||||     
T  45593680 tgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataagctt 45593581  T
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagc 232  Q
    |||| ||| | |||||| ||||||||| || ||||||||  ||||  |||||||||    
T  45593580 ttttccagtttattttcgtaagttctccaagatagcttagaaaaatagcttatagc 45593525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 38499885 - 38499981
Alignment:
Q  131 tttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgctta 228  Q
    ||||||||| ||| |  ||||||||||||||||| || ||||||| |||| ||||| |||||||||||||||| || || ||||||||| || |||||    
T  38499885 tttgggagaacttttcaaaacagcttatgacatttttcataagct-ttttccagcttattttcataagttctccaagattgcttatgaagacagctta 38499981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 39907855 - 39907782
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||| | |||||||||| |  ||||||||||||    
T  39907855 ttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaa 39907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 47559619 - 47559672
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  47559619 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 47559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 48470159 - 48470015
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    |||||||| |||  |||||||||||| ||| |  |||||||||||| |||| || ||||||| ||||| |||| || |||||||||| |  |||||||||    
T  48470159 taagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagct-tttttgagcttatgttcataagttattcaaaatagct 48470061  T
Q  214 tatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||||||  ||||||   || |  |||||||||||| |||||||    
T  48470060 tatgaaaacaacttatattatatacaaaaacaatttaacttaattt 48470015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 27548300 - 27548245
Alignment:
Q  193 cataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatt 248  Q
    |||||||| || || ||||||||||||||| |||||||||||| ||||||||||||    
T  27548300 cataagttatccaagatagcttatgaaaacagcttatagcttaaatgaaaacaatt 27548245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 44822011 - 44821940
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||| || |||||||||||||||| | |||||||||||||||| ||||||| |||| |  ||||||||||    
T  44822011 ttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaattt 44821940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 20526918 - 20527003
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctt 234  Q
    ||||||||||||| |||||| ||||| | |||| ||||| |||||||||||||||  |  ||||||||||||||| |||| ||||||    
T  20526918 aaacagcttatgagattgtttataagatctttt-cagcttattttcataagttctacactatagcttatgaaaacagcttgtagctt 20527003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 40688996 - 40689077
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||||||  |||| ||||||||||||| || |  |||||||||||| || |||||||||||| ||||||| |||||||    
T  40688996 ataagctgttttg-agcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaa 40689077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 46280289 - 46280363
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||  |||||||||||||||| || ||||||||| ||||| ||||||||| || |  ||||||||||||    
T  46280289 tttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaatttaa 46280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 12110402 - 12110341
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    |||||||||||||||  || ||||||||||||||| |||||||||||| |  ||||||||||    
T  12110402 attttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaattt 12110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 20881654 - 20881727
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||  ||||||||||  | | |||||||||||    
T  20881654 ttttcagcttattttcataagttctttaagatagtttatgaaaacaacttatagcttgtacggaaacaatttaa 20881727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 36517677 - 36517588
Alignment:
Q  129 tgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||||||||||| ||| || |||||||||  ||||||||| ||||||| |||| ||| | |||||||||| ||||| || ||||||||||||||    
T  36517677 tgtttgggagaacttattaaaacagctt--gacattgttcataagctatttt-cagtttattttcataatttctccaagatagcttatgaaaa 36517588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 33601399 - 33601466
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||||||||||||||| | || ||||||| |||||||||| |  |||||||||||||||| |||||||||    
T  33601399 aaacagcttatgacacttttcataagct-tttttcagcttaaattcataagttctctaagatagcttat 33601466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 34035992 - 34035925
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    |||||||||||||| ||||| |||||| || || ||||||  ||||||||||| |||||||||||||||    
T  34035992 cttatgacattgttcataagttgtttt-caacttattttcgcaagttctctaagatagcttatgaaaac 34035925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 44989632 - 44989740
Alignment:
Q  114 taagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagct 213  Q
    ||||||||||||   ||||||||| | ||| |  ||||| ||| |||||||||| | |||||||||| ||||| |||||||||| ||||  || ||| ||    
T  44989632 taagttttgtgagactgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataatttctacaagatatct 44989731  T
Q  214 tatgaaaac 222  Q
    |||||||||    
T  44989732 tatgaaaac 44989740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 251
Target Start/End: Original strand, 19022542 - 19022676
Alignment:
Q  116 agttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagctta 215  Q
    ||||||||||  ||||||||||||  || |  ||||| ||||||||| | || ||||| ||| || || || |||||||||||||||| || ||||||||    
T  19022542 agttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtctt-caacttattttcataagttctccaatatagctta 19022640  T
Q  216 tgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    | |||||  |||||||| |  || ||||||||||||    
T  19022641 taaaaacaacttatagcatttattaaaacaatttaa 19022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 25297001 - 25296954
Alignment:
Q  213 ttatgaaaactgcttatagcttacatgaaaacaatttaatttaattta 260  Q
    |||||||||| |||||||| ||| ||||||||||||||| ||||||||    
T  25297001 ttatgaaaacagcttatagtttatatgaaaacaatttaacttaattta 25296954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 28340878 - 28340933
Alignment:
Q  194 ataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||| ||||||  ||||||||||||||| |||||||||||| |||| ||||||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatatgacaacaattt 28340933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 33678878 - 33678776
Alignment:
Q  131 tttgggagagcttgttcaaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||| ||| |  ||||| ||||| |||||||| || || |||||| || || ||||||| ||||| || || ||||||||||||||| |||||||    
T  33678878 tttgggagaacttatgaaaacaacttataacattgttcatgagatgtttt-caacttattttcacaagttttccaagatagcttatgaaaacagcttata 33678780  T
Q  231 gctt 234  Q
    ||||    
T  33678779 gctt 33678776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 5628585 - 5628651
Alignment:
Q  179 tttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaaca 245  Q
    |||||||| ||||||||||| |||||   ||| ||||||||||| ||||||| |||| |||||||||    
T  5628585 tttcagcttattttcataagctctctgtgatatcttatgaaaacagcttatatcttaaatgaaaaca 5628651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 22283754 - 22283835
Alignment:
Q  169 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||| ||||| |||| |||||||||||||| || | |||||||||| | |||||||| | |  ||||||||||||    
T  22283754 ataagctgtttt-cagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaa 22283835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 33552878 - 33552912
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||||||||||||| |||||||||||||||    
T  33552878 attttcataagttctctaagatagcttatgaaaac 33552912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 30456478 - 30456539
Alignment:
Q  188 attttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 249  Q
    ||||||||||| |||| || |||| ||||||||||  |||||| |||| |||||||||||||    
T  30456478 attttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaattt 30456539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 48507797 - 48507701
Alignment:
Q  155 ttatgacattgttgataagctgtttttcagctcattttcataagttctctaa-aatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||| || ||||| | |||||||||| | |||||||||||||||||  || |||||||||||| | ||||||| || |  ||||||||||||    
T  48507797 ttatgacattttttataag-tatttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatatacaaaaacaatttaa 48507701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 5947262 - 5947183
Alignment:
Q  151 cagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    ||||||||| |||| || ||||||| |||| ||||| |||||||||| |||||  | |||||||||||| || ||||||||    
T  5947262 cagcttatggcatttttcataagctctttt-cagcttattttcataacttctcctagatagcttatgaatacagcttatag 5947183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 6263410 - 6263462
Alignment:
Q  207 aatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||||||||||| | ||||||| |||| |||||||| |||| |||||||||    
T  6263410 aatagcttatgaaatcagcttataacttatatgaaaaccattttatttaattt 6263462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 7241331 - 7241423
Alignment:
Q  154 cttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 251  Q
    |||||||||||||| ||||| |||||| |||    ||||||||||||||| || |||| ||| |||||  |||||||||||| ||| | |||||||||    
T  7241331 cttatgacattgttcataagttgtttt-cag----ttttcataagttctcaaagatagtttacgaaaatagcttatagcttatatgtacacaatttaa 7241423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 7244732 - 7244688
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaac 222  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||    
T  7244732 ttttcagcttattttcataagctctccaatatagcttatgaaaac 7244688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 18350738 - 18350806
Alignment:
Q  191 ttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaatttaattt 259  Q
    |||||||| |||| |  ||||||||||||||| ||||||| |||| | ||||||||||||  |||||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatacgaaaacaatttagcttaattt 18350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 18865069 - 18865113
Alignment:
Q  177 tttttcagctcattttcataagttctctaaaatagcttatgaaaa 221  Q
    ||||||| || ||||||||||||||||| ||||| ||||||||||    
T  18865069 tttttcaacttattttcataagttctctgaaataacttatgaaaa 18865113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 19302482 - 19302605
Alignment:
Q  78 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttcaaacagcttatgacattgttgataagctgt 177  Q
    |||||| |||||| |||||||| |||| | ||| | ||||||||||||   | |||||||||  || |  ||||||||||||||| | || |||| || |    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaact-t 19302580  T
Q  178 ttttcagctcattttcataagttct 202  Q
    |||||| || |||||||||||||||    
T  19302581 ttttcaacttattttcataagttct 19302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 21453346 - 21453278
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaa 246  Q
    ||||||||| || ||||| || ||||||  ||||||||||||||| | |||||||||| |||| |||||    
T  21453346 ttttcagcttatcttcattagctctctaggatagcttatgaaaacagtttatagcttatatgagaacaa 21453278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 33602016 - 33602083
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttat 216  Q
    ||||||||||||||| | || ||||||  |||||||||| |  |||||||||||||||| |||||||||    
T  33602016 aaacagcttatgacacttttcataagcc-tttttcagcttaaattcataagttctctaagatagcttat 33602083  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 33673154 - 33673072
Alignment:
Q  151 cagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    |||||||||||||| || |||| ||||||| |||||  |||| |||| ||||| || |||||||||| |||| ||||||||||||    
T  33673154 cagcttatgacattttt-ataaactgtttt-cagcttgtttttataaattctccaatatagcttatggaaacagcttatagctta 33673072  T

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Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 22312 - 22230
Alignment:
Q  148 aaacagcttatgacattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 231  Q
    ||||||||||||||| | ||  |||||| |||||||||| ||||||||||||| || || ||||||||||| ||| ||||||||    
T  22312 aaacagcttatgacaattttcgtaagct-tttttcagcttattttcataagttttccaacatagcttatgataacagcttatag 22230  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 21287 - 21355
Alignment:
Q  160 acattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttata 230  Q
    ||||||||||||| |||||||  || | |||||||||| ||||| || ||||||||||||||| |||||||    
T  21287 acattgttgataaactgtttt--agtttattttcataatttctccaatatagcttatgaaaacagcttata 21355  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 178343 - 178400
Alignment:
Q  178 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctta 235  Q
    ||||||||| |||||||||||||||| || || |||| ||||||| ||| ||||||||    
T  178343 ttttcagcttattttcataagttctcaaagatggcttgtgaaaacagctaatagctta 178400  T

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