View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8891_high_14 (Length: 243)
Name: NF8891_high_14
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8891_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 25913376 - 25913611
Alignment:
| Q |
1 |
ttgtggttgaattgcaacagatatctgttctctgttgtgggaatgacatcaaatcccttcaccgtcctccagactgtgttcagccgttgtttgaagtatg |
100 |
Q |
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| T |
25913376 |
ttgtggttgaattgaaacaggtatctgttctctgttgtgggaatgacatcaaatcccttcaccggcctccaggttgtgctcagccgttgtttgaagtatg |
25913475 |
T |
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| Q |
101 |
ttagtcgtacctccttgtcagagagcaaacgactaatcaagcagtggtcttggatgatggagttttggacagaggcattaagatttagggtcataccctc |
200 |
Q |
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|||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |
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| T |
25913476 |
ttagtcgtacctccttatcagagagcacacgaccaatcaagcagtggtcttggatgatggagttttggacaaagacatcaagatttagggtcataccctc |
25913575 |
T |
|
| Q |
201 |
atcttccagagttaaaccatcaagattgatgtccat |
236 |
Q |
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||||||||||||||| |||||||||||||||||||| |
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| T |
25913576 |
atcttccagagttaagccatcaagattgatgtccat |
25913611 |
T |
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