View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8891_low_20 (Length: 391)
Name: NF8891_low_20
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8891_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 27584428 - 27584807
Alignment:
| Q |
1 |
ttttattattttattttctcccttgtattgtagatttaagattggttgggttagattttgtagatagtgttatgtgttcttaagttaagccatttatatc |
100 |
Q |
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| T |
27584428 |
ttttattattttattttctcccttgtattgtagatttaagattggttgggttagattttgtagatagtgttatgtgttcttaagttaagccatttatatc |
27584527 |
T |
|
| Q |
101 |
ctcaggtccacatgctatgtgttgagctggatcgacccgacacggaaatcaaactttctgaagttactggacctgatggtttgactgaatttgttaaacc |
200 |
Q |
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| T |
27584528 |
ctcaggtccacatgctatgtgttgagctggatcgaccagacacggaaatcaaactttctgaagttactggacctgatggtttgactgaatttgttaaatc |
27584627 |
T |
|
| Q |
201 |
ttctgaacccgaatcatctgaggctacgtctatatctgtgctggagttggattcattggaaaagactttggtggtgaatgataatagcgactctattcat |
300 |
Q |
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| T |
27584628 |
ttctgaacccgaatcatctgaggctacgtctatatctgtgccggagttggattcattggaaaagactttggtggtgaatgataatagcgactctattcat |
27584727 |
T |
|
| Q |
301 |
gccgagcatgcaggagatctacagctggtaccagatgatattgaagaaattgttcaaattccactggatgataatgatgt |
380 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27584728 |
gccgagcatgcaagagatctacagctggtaccagatgatattgaagaaattgttcaaattccactggatgataatgatgt |
27584807 |
T |
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