View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8891_low_24 (Length: 352)

Name: NF8891_low_24
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8891_low_24
NF8891_low_24
[»] chr3 (33 HSPs)
chr3 (27-273)||(820920-821166)
chr3 (17-253)||(6290290-6290526)
chr3 (175-273)||(20398071-20398169)
chr3 (18-163)||(22245859-22246005)
chr3 (17-138)||(13907658-13907780)
chr3 (20-161)||(314625-314767)
chr3 (17-134)||(27853925-27854043)
chr3 (289-331)||(26822054-26822096)
chr3 (91-152)||(3115878-3115939)
chr3 (91-156)||(23756606-23756671)
chr3 (91-139)||(8267534-8267582)
chr3 (217-269)||(21083703-21083755)
chr3 (205-252)||(13907835-13907882)
chr3 (17-76)||(20885818-20885876)
chr3 (17-193)||(21018383-21018552)
chr3 (91-156)||(18736134-18736199)
chr3 (91-156)||(21825291-21825356)
chr3 (204-273)||(22245758-22245827)
chr3 (212-272)||(8144068-8144128)
chr3 (95-135)||(12772385-12772425)
chr3 (212-272)||(25757174-25757234)
chr3 (217-272)||(28729199-28729254)
chr3 (274-316)||(4250705-4250747)
chr3 (107-136)||(8144205-8144234)
chr3 (91-156)||(8446392-8446457)
chr3 (91-132)||(19171320-19171360)
chr3 (92-152)||(5508913-5508973)
chr3 (205-273)||(8446274-8446342)
chr3 (287-331)||(13979673-13979717)
chr3 (92-136)||(16221953-16221997)
chr3 (91-135)||(16245184-16245228)
chr3 (207-255)||(18736252-18736300)
chr3 (91-135)||(21325939-21325983)
[»] chr5 (36 HSPs)
chr5 (17-273)||(19762660-19762917)
chr5 (18-254)||(19085621-19085849)
chr5 (18-274)||(9521242-9521499)
chr5 (17-189)||(23265663-23265836)
chr5 (17-192)||(26252346-26252521)
chr5 (18-161)||(24164433-24164577)
chr5 (18-273)||(17170943-17171199)
chr5 (19-136)||(17635874-17635992)
chr5 (17-129)||(26314273-26314386)
chr5 (18-256)||(17470662-17470900)
chr5 (17-149)||(26066704-26066837)
chr5 (19-265)||(24260981-24261222)
chr5 (65-267)||(25579308-25579509)
chr5 (30-157)||(15544645-15544770)
chr5 (91-273)||(22871121-22871302)
chr5 (17-82)||(18416812-18416877)
chr5 (23-154)||(18226690-18226821)
chr5 (205-273)||(26314174-26314242)
chr5 (287-331)||(14616442-14616486)
chr5 (91-138)||(24264927-24264974)
chr5 (91-138)||(24341558-24341605)
chr5 (94-192)||(27920899-27920997)
chr5 (212-253)||(17337385-17337426)
chr5 (90-143)||(18207721-18207774)
chr5 (29-151)||(26308205-26308328)
chr5 (288-328)||(7649956-7649996)
chr5 (91-135)||(25401793-25401837)
chr5 (287-331)||(33921402-33921446)
chr5 (96-143)||(34488224-34488271)
chr5 (205-255)||(24167100-24167150)
chr5 (287-331)||(33320692-33320737)
chr5 (210-255)||(34488106-34488151)
chr5 (287-331)||(9691068-9691112)
chr5 (206-258)||(17635747-17635799)
chr5 (287-331)||(21680664-21680708)
chr5 (217-273)||(23265581-23265637)
[»] chr6 (34 HSPs)
chr6 (17-273)||(9726458-9726713)
chr6 (17-273)||(14725864-14726120)
chr6 (18-273)||(2587158-2587413)
chr6 (18-269)||(24215990-24216240)
chr6 (11-152)||(9291460-9291602)
chr6 (17-256)||(22565557-22565791)
chr6 (91-156)||(22849958-22850023)
chr6 (91-132)||(15466967-15467008)
chr6 (205-273)||(9276845-9276913)
chr6 (273-334)||(14969998-14970060)
chr6 (37-151)||(10504193-10504308)
chr6 (287-331)||(1838663-1838707)
chr6 (91-135)||(4340336-4340380)
chr6 (91-135)||(14078934-14078978)
chr6 (287-331)||(19664679-19664723)
chr6 (37-156)||(23087709-23087829)
chr6 (91-134)||(19245174-19245217)
chr6 (217-268)||(20404292-20404343)
chr6 (274-316)||(6514313-6514355)
chr6 (205-247)||(9291640-9291682)
chr6 (274-316)||(14966537-14966579)
chr6 (94-135)||(11177533-11177574)
chr6 (95-264)||(23645232-23645400)
chr6 (274-336)||(28849131-28849195)
chr6 (109-138)||(34479152-34479181)
chr6 (91-135)||(1635578-1635622)
chr6 (288-331)||(11411069-11411113)
chr6 (295-331)||(15535243-15535279)
chr6 (287-323)||(15540765-15540801)
chr6 (91-135)||(18074815-18074859)
chr6 (91-135)||(22409788-22409832)
chr6 (19-138)||(22564360-22564480)
chr6 (91-139)||(22568434-22568481)
chr6 (289-329)||(32427489-32427529)
[»] chr2 (39 HSPs)
chr2 (17-273)||(26291523-26291779)
chr2 (19-273)||(27418673-27418928)
chr2 (17-273)||(25939584-25939841)
chr2 (19-272)||(27419820-27420074)
chr2 (18-272)||(45553583-45553837)
chr2 (17-162)||(45621308-45621454)
chr2 (16-154)||(21072157-21072296)
chr2 (17-157)||(25348568-25348709)
chr2 (205-273)||(21078202-21078270)
chr2 (18-151)||(16075830-16075964)
chr2 (17-136)||(8502523-8502643)
chr2 (91-135)||(22568196-22568240)
chr2 (204-255)||(29027970-29028021)
chr2 (78-135)||(19199613-19199671)
chr2 (17-83)||(41789984-41790050)
chr2 (91-143)||(23006688-23006740)
chr2 (287-331)||(23673358-23673402)
chr2 (287-331)||(36327114-36327158)
chr2 (216-271)||(45621472-45621527)
chr2 (70-136)||(18932852-18932919)
chr2 (94-135)||(32085937-32085978)
chr2 (91-143)||(23011216-23011268)
chr2 (287-328)||(24384938-24384981)
chr2 (285-331)||(1503202-1503249)
chr2 (285-331)||(1506406-1506453)
chr2 (91-138)||(9761900-9761947)
chr2 (95-162)||(20174750-20174817)
chr2 (91-138)||(29031770-29031817)
chr2 (91-133)||(20173279-20173321)
chr2 (209-255)||(23933232-23933278)
chr2 (17-63)||(24533987-24534033)
chr2 (91-136)||(13777018-13777063)
chr2 (19-52)||(20174862-20174895)
chr2 (18-50)||(12950442-12950474)
chr2 (18-50)||(17350031-17350063)
chr2 (19-47)||(17742932-17742960)
chr2 (91-135)||(25887357-25887401)
chr2 (18-46)||(31804193-31804221)
chr2 (287-331)||(32575698-32575742)
[»] chr1 (30 HSPs)
chr1 (17-273)||(17442675-17442932)
chr1 (18-273)||(34481394-34481649)
chr1 (18-273)||(16787137-16787390)
chr1 (28-273)||(15299455-15299698)
chr1 (18-162)||(16113464-16113609)
chr1 (17-76)||(17837888-17837947)
chr1 (23-254)||(22620739-22620965)
chr1 (91-138)||(24281871-24281918)
chr1 (212-272)||(13134667-13134727)
chr1 (288-331)||(13496175-13496218)
chr1 (91-141)||(12209165-12209215)
chr1 (92-134)||(28008705-28008747)
chr1 (56-136)||(14240208-14240289)
chr1 (91-156)||(16360444-16360509)
chr1 (91-139)||(25960623-25960671)
chr1 (91-135)||(33191275-33191319)
chr1 (94-129)||(16112320-16112355)
chr1 (288-331)||(16190193-16190236)
chr1 (18-53)||(28008792-28008827)
chr1 (288-331)||(34552452-34552495)
chr1 (209-255)||(16112210-16112256)
chr1 (96-134)||(22664759-22664797)
chr1 (78-135)||(44795965-44796023)
chr1 (287-331)||(15297515-15297559)
chr1 (91-135)||(26021332-26021376)
chr1 (91-151)||(26648499-26648559)
chr1 (18-50)||(31235345-31235377)
chr1 (287-331)||(32505870-32505914)
chr1 (288-331)||(49716677-49716721)
chr1 (288-331)||(49720159-49720203)
[»] scaffold0672 (1 HSPs)
scaffold0672 (17-247)||(4349-4580)
[»] chr8 (18 HSPs)
chr8 (17-274)||(24905080-24905337)
chr8 (23-271)||(17977062-17977310)
chr8 (17-273)||(5052317-5052571)
chr8 (19-177)||(5855639-5855798)
chr8 (59-193)||(17965539-17965674)
chr8 (17-162)||(15064754-15064899)
chr8 (78-135)||(6885554-6885612)
chr8 (204-274)||(30121729-30121799)
chr8 (17-83)||(30486850-30486916)
chr8 (216-273)||(26614849-26614906)
chr8 (32-134)||(24381220-24381323)
chr8 (217-247)||(14075970-14076000)
chr8 (274-316)||(31981667-31981709)
chr8 (274-316)||(31986594-31986636)
chr8 (94-135)||(25181915-25181956)
chr8 (91-135)||(21315222-21315266)
chr8 (92-156)||(24645412-24645476)
chr8 (287-331)||(39659725-39659769)
[»] chr4 (27 HSPs)
chr4 (17-273)||(11520523-11520779)
chr4 (17-247)||(12839182-12839413)
chr4 (18-273)||(9264404-9264658)
chr4 (95-255)||(9053135-9053295)
chr4 (19-170)||(1832965-1833117)
chr4 (17-162)||(18448355-18448499)
chr4 (17-273)||(22526724-22526979)
chr4 (91-153)||(25120688-25120750)
chr4 (18-273)||(26115297-26115550)
chr4 (17-134)||(5529028-5529146)
chr4 (205-273)||(11700150-11700218)
chr4 (91-135)||(17672582-17672626)
chr4 (18-114)||(25024034-25024131)
chr4 (205-258)||(30600365-30600418)
chr4 (212-268)||(7612645-7612701)
chr4 (23-160)||(4214958-4215092)
chr4 (91-136)||(5956548-5956593)
chr4 (91-136)||(11780934-11780979)
chr4 (17-81)||(13587842-13587906)
chr4 (287-331)||(15851480-15851524)
chr4 (287-331)||(26062703-26062747)
chr4 (274-331)||(33927269-33927328)
chr4 (91-154)||(9850900-9850963)
chr4 (91-138)||(14572406-14572453)
chr4 (91-138)||(19092895-19092942)
chr4 (209-255)||(5679679-5679725)
chr4 (95-132)||(19636011-19636048)
[»] scaffold0128 (1 HSPs)
scaffold0128 (91-274)||(58-241)
[»] chr7 (52 HSPs)
chr7 (16-273)||(5530529-5530785)
chr7 (18-273)||(21232922-21233174)
chr7 (17-273)||(15612068-15612325)
chr7 (18-273)||(31493370-31493626)
chr7 (17-265)||(18495831-18496075)
chr7 (18-258)||(11218679-11218921)
chr7 (18-273)||(22338799-22339054)
chr7 (17-273)||(13707931-13708187)
chr7 (19-162)||(9500869-9501012)
chr7 (18-275)||(18662886-18663141)
chr7 (17-255)||(1882732-1882966)
chr7 (18-135)||(5222073-5222191)
chr7 (18-254)||(140592-140822)
chr7 (17-162)||(10938176-10938322)
chr7 (95-188)||(9917052-9917145)
chr7 (95-188)||(9924964-9925057)
chr7 (30-192)||(21884550-21884714)
chr7 (30-133)||(21911871-21911975)
chr7 (146-273)||(21501719-21501844)
chr7 (204-254)||(17152724-17152774)
chr7 (109-192)||(21227857-21227941)
chr7 (204-255)||(10586600-10586651)
chr7 (91-135)||(18202666-18202710)
chr7 (92-135)||(2348385-2348428)
chr7 (78-156)||(6006575-6006651)
chr7 (17-135)||(1873430-1873545)
chr7 (207-273)||(9863906-9863972)
chr7 (90-156)||(12329935-12330001)
chr7 (204-265)||(8873267-8873328)
chr7 (216-253)||(19398463-19398500)
chr7 (70-153)||(5102036-5102119)
chr7 (17-81)||(9721575-9721639)
chr7 (225-273)||(16307143-16307191)
chr7 (218-270)||(23588060-23588112)
chr7 (57-135)||(9863751-9863830)
chr7 (273-316)||(13809275-13809318)
chr7 (288-331)||(24783597-24783640)
chr7 (274-329)||(28577678-28577733)
chr7 (92-130)||(3586547-3586585)
chr7 (221-255)||(3735069-3735103)
chr7 (216-270)||(10480368-10480422)
chr7 (274-316)||(26153471-26153513)
chr7 (216-273)||(1728018-1728075)
chr7 (78-134)||(5107236-5107293)
chr7 (98-135)||(9574992-9575029)
chr7 (212-272)||(9890737-9890798)
chr7 (204-265)||(10649743-10649804)
chr7 (287-331)||(3540937-3540981)
chr7 (108-156)||(7397716-7397764)
chr7 (228-256)||(9500842-9500870)
chr7 (17-81)||(10649924-10649987)
chr7 (91-135)||(10941945-10941989)
[»] scaffold0019 (2 HSPs)
scaffold0019 (16-151)||(183874-184010)
scaffold0019 (19-189)||(27021-27198)
[»] scaffold0136 (1 HSPs)
scaffold0136 (28-151)||(14894-15018)
[»] scaffold0360 (1 HSPs)
scaffold0360 (19-76)||(17529-17586)
[»] scaffold0024 (1 HSPs)
scaffold0024 (91-134)||(40205-40248)
[»] scaffold0005 (1 HSPs)
scaffold0005 (91-138)||(244923-244970)
[»] scaffold0043 (2 HSPs)
scaffold0043 (110-156)||(89334-89380)
scaffold0043 (207-255)||(89433-89481)
[»] scaffold0014 (2 HSPs)
scaffold0014 (274-316)||(224026-224068)
scaffold0014 (274-316)||(228952-228994)
[»] scaffold0622 (1 HSPs)
scaffold0622 (94-135)||(1118-1159)
[»] scaffold0352 (1 HSPs)
scaffold0352 (287-331)||(2632-2676)
[»] scaffold0068 (1 HSPs)
scaffold0068 (287-331)||(33743-33787)


Alignment Details
Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 820920 - 821166
Alignment:
Q  27 tagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgttt 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| || |||||||||| |||||||| ||| |||||||    
T  820920 tagtaattaaggaaacaagtgacttcacaacttaaatcagcccagtaactccattcttcttgcacattcgtaaggtagacgctgatagagcttcccgttt 821019  T
Q  126 gtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaatttagga 225  Q
    ||||||||||| | ||| ||||||||||||||||||| | ||||| || |||||| |||||||||||| | | ||||||| |||||||||||||||| ||    
T  821020 gtagaactaccgagagggagagtgtgctatgtacttctaagattcatatatgagg-aacctttaggaacattgggaagtcgtacctttggaaatttacga 821118  T
Q  226 actctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  821119 actctaatttaagtttatgtttcaattactcctaagcgagtaagaccc 821166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 6290526 - 6290290
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||| |||| ||||||||||||| |||||||||||   |||||||||||| || |||||||||||| ||  ||| ||||||||||||| |||||||| |    
T  6290526 agtaattagtaagtaattaaggaaccaagtgacttcatgacttaaatcagcacaataacttcattctactcgcaccttggtaaggtagacgctgatagag 6290427  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
     || | ||||||||||||||||| | | ||||| || |||| ||||| | ||||| || ||||| ||||||||||||| |||| |||  |||||||||||    
T  6290426 atgtctgtttgtagaactaccaagaaggagagtatgttatgcacttctaagattcatagatgagagaacctttaggaacacta-gaaaccatacctttgg 6290328  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaatta 253  Q
    ||||||||||||| ||||||| | ||||||||||||||    
T  6290327 aaatttaggaactttaatttaggattatgtttcaatta 6290290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 20398169 - 20398071
Alignment:
Q  175 atgagggaacctttaggaatactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||    
T  20398169 atgagggaacctttaggaacactaggaagtcatacctttggaaatttaggaactctaatttaagtatatgtttcaattacctctgagcgagtaagaccc 20398071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 22246005 - 22245859
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    ||||||| ||||||||||||||||||| ||||||| | |||||||||||| |||||||| |||||| ||  || |||||| |||||||  ||||||||||    
T  22246005 gtaactaattagtaattaaggaaacaattgacttcacgacttaaatcagctcagtaactccattctcctctcaccttggtgaggtagacactgatagggc 22245906  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttca 163  Q
    | |||||||||||||||||  | ||||| ||||||||||||||||||    
T  22245905 tacccgtttgtagaactactgagaggaaaagtgtgctatgtacttca 22245859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 13907658 - 13907780
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||  |  || |||||||||  ||||||||||||||    
T  13907658 agtaactagttagtaattaaggaaacaagtgacttcacgacttaaatcaacctagtaactccattctcttcgcaccttggtaagtaagatgctgataggg 13907757  T
Q  116 ctgcccgtttgtagaactaccaa 138  Q
    || ||| ||||||||||||||||    
T  13907758 cttcccatttgtagaactaccaa 13907780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 314767 - 314625
Alignment:
Q  20 aactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggctg 118  Q
    |||||||||||||||||||||||||||||||||   |||||||| || ||||||||| |||||||||  || ||| |||||||||||| ||||||| |||    
T  314767 aactagttagtaattaaggaaacaagtgacttcatgacttaaattagtccagtaactccattcttctcgcaccttcgtaaggtagatgttgataggactg 314668  T
Q  119 cccgtttgtagaactaccaaaaggaagagtgtgctatgtactt 161  Q
     | |||||||||| |||| | ||| | |  |||||||||||||    
T  314667 tctgtttgtagaattaccgagagggacaacgtgctatgtactt 314625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 27853925 - 27854043
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||||| |||||||| || ||||| | ||||||||||||| ||||||| || || |||| || |||| ||||||||| ||| ||||||    
T  27853925 agtaactagttagtaatttaggaaacaggttacttcacgacttaaatcagcctagtaactccactcatctttcaccttgataaggtagacgctaataggg 27854024  T
Q  116 ctgcccgtttgtagaacta 134  Q
    || | ||||||||||||||    
T  27854025 cttctcgtttgtagaacta 27854043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 26822054 - 26822096
Alignment:
Q  289 aagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  26822054 aagtgtaccaaaactatcgaagtaataataaaattcgtatcca 26822096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 3115878 - 3115939
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgc 152  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||| | ||| |||||||||    
T  3115878 cttggtaaggtagacactgataaggctgcccgtttgtagaactaccgagagggagagtgtgc 3115939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 23756606 - 23756671
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||| |||||||| |||||||||||| ||  |||||||||||| ||||||| |||||||||||||    
T  23756606 cttggaaaggtagaagctgatagggcttcctctttgtagaactaacaaaagggagagtgtgctatg 23756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 8267582 - 8267534
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaa 139  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  8267582 cttggtaaggtagacgctgatagggctgcccatttttagaactaccaaa 8267534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 21083755 - 21083703
Alignment:
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaag 269  Q
    |||||||||||||||||||||||||||| |||||||||| || || |||||||    
T  21083755 aatttaggaactctaatttaagtttatgcttcaattacctctgagagagtaag 21083703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 13907835 - 13907882
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaatt 252  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  13907835 cataccattggatatttaggaactccaatttaagtttatgtttcaatt 13907882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 20885876 - 20885818
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaact 76  Q
    |||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  20885876 agtaactagtaa-taattaaggaaacaagtgacttcacgactgaaatcagcccagtaact 20885818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 21018552 - 21018383
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||||||||||||||||||||||  || ||||||| | |||||||||| |||| ||||| ||||| |||| |||   ||||||||||  | |||||||     
T  21018552 agtaactagttagtaattaaggaa--aaatgacttcacgacttaaatcaacccaataactccattc-tctt-cac---gtaaggtagacacggatagggt 21018460  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaa 193  Q
    |||||||||||||||| ||  | | | |||||||| ||||| |||  | ||||| || ||||| ||||||| |||||    
T  21018459 tgcccgtttgtagaaccacttagaaggagagtgtgttatgtgcttgtaagattcatagatgagagaaccttaaggaa 21018383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 18736134 - 18736199
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||||||||||||  ||| ||||||||||||||||| ||||||   | |||||||||||||||||    
T  18736134 cttggtaaggtagacactggtagggctgcccgtttgtggaactattgagaggaagagtgtgctatg 18736199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 21825291 - 21825356
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||||||||||||||||||||| | ||| | |||||||||||||| |  || |||||||||||||    
T  21825291 cttggtaaggtagatgctgatagagttgctcatttgtagaactaccgagtgggagagtgtgctatg 21825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 22245827 - 22245758
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||| ||||| |||||||||||| | ||||||| | || |||||||||||||||||  |||||||||||    
T  22245827 tcataactttgtaaatttaggaacgccaatttaaatctaagtttcaattacccctaacggagtaagaccc 22245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 8144128 - 8144068
Alignment:
Q  212 ttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagacc 272  Q
    ||||||||||||||| || ||||||||| |||||||||||||||  | || ||||||||||    
T  8144128 ttggaaatttaggaattccaatttaagtctatgtttcaattacctttgagagagtaagacc 8144068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 12772385 - 12772425
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  12772385 gtaaggtagacgctgatagggatgcccgtttgtagaactac 12772425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 25757234 - 25757174
Alignment:
Q  212 ttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagacc 272  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||| || || ||||||||||    
T  25757234 ttggaaatttaagaatgctaatttaagtctatgtttcaattacctctgagagagtaagacc 25757174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 28729254 - 28729199
Alignment:
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagacc 272  Q
    ||||||||||| |||||| |||| ||||||||||||||| || || ||||||||||    
T  28729254 aatttaggaacgctaattcaagtctatgtttcaattacctctgagagagtaagacc 28729199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 4250747 - 4250705
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  4250747 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 4250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 136
Target Start/End: Complemental strand, 8144234 - 8144205
Alignment:
Q  107 ctgatagggctgcccgtttgtagaactacc 136  Q
    ||||||||||||||||||||||||||||||    
T  8144234 ctgatagggctgcccgtttgtagaactacc 8144205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 8446457 - 8446392
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||| ||||||||  ||||||||| || ||||||||| ||||||| | ||| |||||||||||||    
T  8446457 cttggaaaggtagacactgatagggttgtccgtttgtataactaccgatagggagagtgtgctatg 8446392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 19171320 - 19171360
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaac 132  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  19171320 cttggtaaggtagatga-gatagggctgcccgtttgtagaac 19171360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 5508973 - 5508913
Alignment:
Q  92 ttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgc 152  Q
    ||||||||||| | ||| |||||||| || ||||||||||||||| | ||| |||||||||    
T  5508973 ttggtaaggtacacgctcatagggcttcctgtttgtagaactaccgagaggtagagtgtgc 5508913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 8446342 - 8446274
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||| |||| |||||||||||  | ||||||||| |||||||||||||||  | || |||||||||||    
T  8446342 catacttttgaaaatttaggaatgccaatttaagtctatgtttcaattacctttgagggagtaagaccc 8446274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 13979717 - 13979673
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| |||| ||| |||||    
T  13979717 gcaagtgaaccaaaactatcgaagtaataaataaaatcgaatcca 13979673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 16221997 - 16221953
Alignment:
Q  92 ttggtaaggtagatgctgatagggctgcccgtttgtagaactacc 136  Q
    ||||||| |||||  ||||||||||||| ||||||||||||||||    
T  16221997 ttggtaaagtagacactgatagggctgctcgtttgtagaactacc 16221953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 16245184 - 16245228
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||| ||||||||| |||||||||||| ||| |||||||||||||    
T  16245184 cttgctaaggtagacgctgatagggcttcccatttgtagaactac 16245228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 18736252 - 18736300
Alignment:
Q  207 tacctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    |||||||| |||||||| || || ||||||||||||||||| |||||||    
T  18736252 tacctttgaaaatttagaaaatccaatttaagtttatgtttgaattacc 18736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 21325983 - 21325939
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| ||||| |||||| ||||||||| |||||||    
T  21325983 cttggtaaggtagacgctgacagggcttcccgtttgttgaactac 21325939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 7e-77; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 19762660 - 19762917
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||||| |||||||||| ||| ||||||||||||| ||||||||||    
T  19762660 agtaactagttagtaattaaggaaacaagtgacttcacgtcttaaatcagcccaataactccattcttcttgcaccttggtaaggtagacgctgataggg 19762759  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    ||| ||||||| ||||||||| | ||| ||||||||| ||||||||| | ||||| ||||||| |||||||||||||| | | | |||||||||||||||    
T  19762760 ctgtccgtttggagaactaccgagagggagagtgtgcaatgtacttctaagattcataaatgaaggaacctttaggaacattggaaagtcatacctttgg 19762859  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  19762860 aaatttaagaactctaatttgtgtttatgtttcgattacccctaagcgagtaagaccc 19762917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 19085621 - 19085849
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggct 117  Q
    |||| |||||||||||||||||||| | ||||||| |||||||||||||| || ||||| ||||||| || || |||||||||||||||||||||| |||    
T  19085621 gtaagtagttagtaattaaggaaacta-tgacttcacaacttaaatcagcacattaactccattcttttt-ca-ttggtaaggtagatgctgatagagct 19085717  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaa 217  Q
    |||| |||||||||||||  | ||||||| |||||||     ||| | ||||| ||||| |||||||||||||||| | | ||||||||||||||||| |    
T  19085718 gcccatttgtagaactactgagaggaagaatgtgcta-----ttctaagattcataaattagggaacctttaggaacattgggaagtcatacctttggta 19085812  T
Q  218 atttaggaactctaatttaagtttatgtttcaattac 254  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19085813 atttaggaactctaacttaagtttatgtttcaattac 19085849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 9521499 - 9521242
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    ||||||||||||||||||||||||||| ||||||  | |||||||||||   | ||||| |||||| ||| ||| || |||| ||||| | ||||||||     
T  9521499 gtaactagttagtaattaaggaaacaattgactttacgacttaaatcagtataataactccattctcctttcaccttcgtaaagtagacgatgatagggt 9521400  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    || ||||||||||||||||| | ||| ||||||||||||||||||| | || |  ||  ||||| ||||||||  || | |  |||||||||| |||| |    
T  9521399 tgtccgtttgtagaactaccgagagggagagtgtgctatgtacttctaagactaatagttgaggaaacctttaacaacattgagaagtcatacatttgaa 9521300  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccct 274  Q
    ||| ||||||| ||||||||||| ||| |||||||||||  | || ||||||||||||    
T  9521299 aatataggaacactaatttaagtatatatttcaattacctttgagcgagtaagaccct 9521242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 23265836 - 23265663
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    |||| ||||||| |||||||||||||| |||||||| | ||||||||||||||| |||||||||||| ||| || |||||||||||||||| ||||||||    
T  23265836 agtagctagttactaattaaggaaacatgtgacttcacgacttaaatcagcccaataacttcattctcctttcaccttggtaaggtagatgttgataggg 23265737  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaaccttta 189  Q
     ||| |||||||||||||||| | | | |||||||| ||||| |||| | ||||| || ||||| | |||||||    
T  23265736 ttgctcgtttgtagaactaccgagatggagagtgtgttatgtgcttctaagattcgtagatgagcgtaccttta 23265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 26252521 - 26252346
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||||||||||||| |||  |||| | |||||||| | ||| |||||| | ||||||||||||||| ||   | |||||||||||||||||||||||||    
T  26252521 agtaactagttagtagttagagaaagatgtgacttcacgactgaaatcaacacagtaacttcattctcctagaaattggtaaggtagatgctgatagggc 26252422  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttagga 192  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||||| | ||||| |  ||||| ||||| ||||||    
T  26252421 tgcccgtttgcagaactaccgagagggagagtgtgctatgtacttctaagattcattgatgagtgaaccattagga 26252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 24164433 - 24164577
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca--cttggtaaggtagatgctgataggg 115  Q
    ||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| | |||||| |||  |  |||||||||||||| ||||||||||    
T  24164433 gtaactagttattaattaaggaaacaagtgacttcatgacttaaatcagcccagtaattccattct-cttcgaaccttggtaaggtagacgctgataggg 24164531  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtactt 161  Q
    |||||| ||||||||| ||| || ||| ||||||||||||||||||    
T  24164532 ctgcccatttgtagaagtactaagagggagagtgtgctatgtactt 24164577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 17170943 - 17171199
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    ||||||||||| |||||||||||| | | ||||||   ||||||||||| ||||||| | |||||| || | || ||||||||||||| |||||||||||    
T  17170943 gtaactagttattaattaaggaaataggcgacttcatgacttaaatcaggccagtaattccattctcctcaaaccttggtaaggtagacgctgatagggc 17171042  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaa-cctttaggaatactaggaagtcatacctttgg 215  Q
    |||| ||||||||||||| ||| ||| |||||||| |||||||| | | ||||| || ||| |  || |||||||||| ||| |    |||||| |||||    
T  17171043 tgcctgtttgtagaactatcaagagggagagtgtgttatgtactgctaagattcatagatgggaaaaccctttaggaacact-gaccatcatacttttgg 17171141  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||| |   ||||||||||||||| |||||  |||| |||||||||||    
T  17171142 aaatttaggaactccaccataagtttatgtttcagttacctttaagggagtaagaccc 17171199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 17635992 - 17635874
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggct 117  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||  ||||| || ||| ||||||||||||||||||||| | |||    
T  17635992 taactagttaataattaaggaaacaagtgacttcacgacttaaatctgcccggtaactctattctcctcacaccttggtaaggtagatgctgatcgcgct 17635893  T
Q  118 gcccgtttgtagaactacc 136  Q
    |||| ||||||||||||||    
T  17635892 gcccatttgtagaactacc 17635874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 26314386 - 26314273
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| | || |||| |||||| ||  || ||| |||||||||| ||||||||||    
T  26314386 agtaagtagttagtaattaaggaaacaagtgacttcacaacttaaatcagtctagcaactccattctcctcgcaccttagtaaggtagacgctgataggg 26314287  T
Q  116 ctgcccgtttgtag 129  Q
    ||||||||||||||    
T  26314286 ctgcccgtttgtag 26314273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 17470662 - 17470900
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    ||||||| ||| |||||||||||||||||||||||    ||||||| || ||| |||||||||||| ||  ||| |||||||||||||  |||||||||     
T  17470662 gtaactaattattaattaaggaaacaagtgacttcatgtcttaaattagtccaataacttcattctcctcgcaccttggtaaggtagacactgataggga 17470761  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    | |||||||||||||||||  | ||| ||||| || |||||||| | | ||||| || ||| |  |||||||||||| | | ||    ||||||||||||    
T  17470762 ttcccgtttgtagaactactgagagggagagtttgttatgtactcctaagattcatagatgggaaaacctttaggaaca-ttggccaccatacctttgga 17470860  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattaccc 256  Q
    |||||| |||  | || |||||||||||||||||||||||    
T  17470861 aatttaagaatgccaacttaagtttatgtttcaattaccc 17470900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 26066837 - 26066704
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    |||||||| |||||| |||||||||||||| ||||| | |||||||||||   ||||||| |||||| ||  ||| |||||||| |||| ||||||||||    
T  26066837 agtaactaattagtacttaaggaaacaagttacttcacgacttaaatcagtgtagtaactccattctcctcgcaccttggtaagttagacgctgataggg 26066738  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtg 149  Q
    ||||||||||||||||||||| | ||| ||||||    
T  26066737 ctgcccgtttgtagaactaccgagagggagagtg 26066704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 265
Target Start/End: Complemental strand, 24261222 - 24260981
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggctg 118  Q
    ||||||||||| || |||||||||  ||| ||||  || |||||||||| |||||||| ||||||   ||| || ||||||||||| ||||||||||||     
T  24261222 taactagttagaaaataaggaaac--gtgtcttcataaattaaatcagctcagtaactccattctc--taccctcggtaaggtagacgctgatagggcta 24261127  T
Q  119 cccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaa 218  Q
    |||||||||| |||||| || |   | |||||||||||||| || | ||||| || | ||| ||||||| | ||| ||| ||   |||||||||||||||    
T  24261126 cccgtttgtataactactaagatataaagtgtgctatgtacgtctaagattcatagacgagagaaccttcaagaacact-ggctatcatacctttggaaa 24261028  T
Q  219 tttaggaactctaatttaagtttatgtttcaattacccctaagtgag 265  Q
    | ||||||||||    |||||||||||||||||||||| | ||||||    
T  24261027 tctaggaactcttccctaagtttatgtttcaattacccttgagtgag 24260981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 267
Target Start/End: Original strand, 25579308 - 25579509
Alignment:
Q  65 agcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttca 163  Q
    ||||||||||||||||||| ||  ||| ||||||||||||| |||||||||| ||| | ||| ||||| |||| | ||| ||||| |||||||||||||     
T  25579308 agcccagtaacttcattctcctctcaccttggtaaggtagacgctgataggggtgctcatttatagaaataccgagagggagagtatgctatgtacttct 25579407  T
Q  164 aggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtg 263  Q
    | ||||| |  |||||  |||||| ||||| ||  ||    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| || |    
T  25579408 aagattcatggatgagataaccttaaggaa-acctggccaccatacctttggaaatttaggaactctagtttatg-ttatgtttcaattacccctgaggg 25579505  T
Q  264 agta 267  Q
    ||||    
T  25579506 agta 25579509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 15544770 - 15544645
Alignment:
Q  30 taattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggctgcccgtttgta 128  Q
    |||||| |||||||||||||||| | ||||||||||| | |||||||||||||| || | | ||||||||| ||||  |||||||| ||||||||||||     
T  15544770 taattagggaaacaagtgacttcacgacttaaatcagtcaagtaacttcattctcctaaaaccttggtaagatagacactgataggactgcccgtttgt- 15544672  T
Q  129 gaactaccaaaaggaagagtgtgctatgt 157  Q
      |||||| | ||| ||||||||||||||    
T  15544671 --actaccgagagggagagtgtgctatgt 15544645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 273
Target Start/End: Complemental strand, 22871302 - 22871121
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttag 190  Q
    |||||||||||||| || ||||||| |||||||||||| ||||||| | ||  | |||||||||| |||| | | ||||| || | |    |||| ||||    
T  22871302 cttggtaaggtagacgcggatagggttgcccgtttgtaaaactaccgagagagatagtgtgctatctactcctaagattcatagaaggtaaaacccttag 22871203  T
Q  191 gaatactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||| ||| |  |  | ||||||||||||||||||||| | || ||||||||||||||||||||||||| || |||||||||||    
T  22871202 gaacactcgcca-ccttacctttggaaatttaggaacgccaacttaagtttatgtttcaattacccctgagggagtaagaccc 22871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 18416877 - 18416812
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattc 82  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||||||| ||||| |||||    
T  18416877 agtaactagttagtaattatggaaacaagtgacttcacgacttaaatcagcccaataactacattc 18416812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 18226821 - 18226690
Alignment:
Q  23 tagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttc-ttacacttggtaaggtagatgctgatagggctgccc 121  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||| | || ||||||||||| |   |  |||||||||||||||| |||||||| ||| |    
T  18226821 tagttagtaattagggaagcaagtgacttcacaacttaaatcagtctagaaacttcattctccgagaaccttggtaaggtagatg-tgatagggatgctc 18226723  T
Q  122 gtttgtagaactaccaaaaggaagagtgtgcta 154  Q
    ||||| |||||||||   ||| |||||||||||    
T  18226722 gtttgaagaactaccgggagggagagtgtgcta 18226690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 26314242 - 26314174
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| || |||||| |||||||||||    
T  26314242 catacctttggaaatttaggaacgccaatttaagtctatgtttcaatcactcctaagggagtaagaccc 26314174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 14616442 - 14616486
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  14616442 gcaagtgaaccaaaactatcgaagtaataaataaattcgtatcca 14616486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 24264927 - 24264974
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||    
T  24264927 cttggtaaggtagacgctgatagggatgtccgtttgtagaactaccaa 24264974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 24341558 - 24341605
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||    
T  24341558 cttggtaaggtagacgctgatagggatgtccgtttgtagaactaccaa 24341605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 27920899 - 27920997
Alignment:
Q  94 ggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgct-atgtacttcaaggattcctaaatgagggaacctttagga 192  Q
    |||||||||||||  ||||||||||||||||||||||||| |  | ||| ||| | |||| ||||||||| | ||||| || ||||||||||||||||||    
T  27920899 ggtaaggtagatga-gatagggctgcccgtttgtagaactgctgagagggagaatatgctgatgtacttctaagattcatagatgagggaacctttagga 27920997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 17337385 - 17337426
Alignment:
Q  212 ttggaaatttaggaactctaatttaagtttatgtttcaatta 253  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  17337385 ttggaaatttaggaactctaatttaagtatatgcttcaatta 17337426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 18207721 - 18207774
Alignment:
Q  90 acttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaagga 143  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||| ||| ||||    
T  18207721 acttggtaaggtagaaggtgatagggctgcctgtttgtagaactaacaagagga 18207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 26308328 - 26308205
Alignment:
Q  29 gtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca--cttggtaaggtagatgctgatagggctgcccgtttg 126  Q
    |||||||  |||||||||||||||   ||||||||||||||| ||||||| ||||| || ||  |||||||||||||  |  ||||||| ||||  ||||    
T  26308328 gtaattagcgaaacaagtgacttcatgacttaaatcagcccaataacttccttcttatttcatccttggtaaggtaggcg-agatagggttgccaatttg 26308230  T
Q  127 tagaactaccaaaaggaagagtgtg 151  Q
    |||||||||||| | | ||||||||    
T  26308229 tagaactaccaagaaggagagtgtg 26308205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 7649956 - 7649996
Alignment:
Q  288 caagtgtaccaaaactatcgaagtaataattaaattcgtat 328  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  7649956 caagtgaaccaaaactatcgaagtaataaataaattcgtat 7649996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 25401793 - 25401837
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||    
T  25401793 cttggtaaggtagacgctgatagggctgtccgtttttagaactac 25401837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 33921446 - 33921402
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||||||||||||||| |||| || ||||||||||    
T  33921446 gcaagtgtaccaaaactatcgaagtagtaataaagttcgtatcca 33921402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 34488271 - 34488224
Alignment:
Q  96 taaggtagatgctgatagggctgcccgtttgtagaactaccaaaagga 143  Q
    ||||||||||||| ||| || |||||||||||||||||||||| ||||    
T  34488271 taaggtagatgctaatatggatgcccgtttgtagaactaccaagagga 34488224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 24167100 - 24167150
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    ||||||||||||||||||||||  | || |||||| |||||||||||||||    
T  24167100 catacctttggaaatttaggaatgccaacttaagtctatgtttcaattacc 24167150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 33320692 - 33320737
Alignment:
Q  287 gcaagtgtaccaaaa-ctatcgaagtaataattaaattcgtatcca 331  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||    
T  33320692 gcaagtgtaccaaaagctatcgaagtaataataaagttcgtatcca 33320737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 34488151 - 34488106
Alignment:
Q  210 ctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||||    
T  34488151 ctttggaaatctaggaacaccaatttaagtttatgtatcaattacc 34488106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 9691112 - 9691068
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||||| ||||||||| |||| || ||||||||||    
T  9691112 gcaagtgtaccaaaaccatcgaagtagtaataaagttcgtatcca 9691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 17635799 - 17635747
Alignment:
Q  206 atacctttggaaatttaggaactctaatttaagtttatgtttcaattacccct 258  Q
    ||||||| ||||||||||||||   || |||||||||||||||||||| ||||    
T  17635799 ataccttcggaaatttaggaacgtcaacttaagtttatgtttcaattatccct 17635747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 21680708 - 21680664
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||||||||||||||| |||| || || |||||||    
T  21680708 gcaagtgtaccaaaactatcgaagtagtaataaagtttgtatcca 21680664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 23265637 - 23265581
Alignment:
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||| ||||||||| |  |||||||||||||| ||||| || ||||||||    
T  23265637 aatttaggaacgctaatttaaatccatgtttcaattaccactaagagaataagaccc 23265581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 9726713 - 9726458
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||||||| ||||||||||||||||| |||||||| | |||||| |||| |||  |||| |||||||||| ||| |  ||||||||| |||||||||||    
T  9726713 agtaactagctagtaattaaggaaacatgtgacttcacgacttaactcagaccacgaactccattcttctttcaccta-taaggtagacgctgatagggc 9726615  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    |||||||||||||||||| | | |   |||||||| |||||| ||| | ||||| || | || |||||||||||||| ||| ||||||||||||||||||    
T  9726614 tgcccgtttgtagaactatcgagaacgagagtgtgttatgtatttctaagattcatagacgatggaacctttaggaacactgggaagtcatacctttgga 9726515  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9726514 aatttaggaactctaatttaagtttatgtttcaattacccctaagcgagtaagaccc 9726458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 14726120 - 14725864
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttct-tacacttggtaaggtagatgctgataggg 115  Q
    ||||| |||||||||||||||||||||||||||||| | |  ||||||| |||| ||||| |||||| ||  |  |||||||||||| ||| ||||| ||    
T  14726120 agtaagtagttagtaattaaggaaacaagtgacttcacgaaataaatcatcccattaactccattctcctcgaaccttggtaaggtaaatgttgataagg 14726021  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    |||| ||||||||||| |||| | ||||||| |||| |||||||||| |  ||   || ||||| ||||||| || || ||| ||    |||||||||||    
T  14726020 ctgctcgtttgtagaattaccgagaggaagaatgtgttatgtacttctaaaatctatagatgagagaaccttcagaaacact-ggtcaccatacctttgg 14725922  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||| |||||||||||||||||||||||||||||||||||||| || | |||||||||    
T  14725921 aaatctaggaactctaatttaagtttatgtttcaattacccctgagggtgtaagaccc 14725864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 2587413 - 2587158
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||| |||||| ||||||| ||  || |||||||||||||| ||||||||||     
T  2587413 gtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcagcctagtaacgtcattctcctcgcaccttggtaaggtagacgctgatagggt 2587314  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    || | ||||| ||||||||  | ||| ||||||||||||||||| | | ||||| || ||||   ||| |||||||| ||| |     ||||||||  ||    
T  2587313 tgtctgtttggagaactactgagagggagagtgtgctatgtactcctaagattcatagatgaaaaaacatttaggaacact-gaccaccataccttatga 2587215  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||| | || ||||||||||||||||||||||  | || |||||||||||    
T  2587214 aatttaggaacgccaacttaagtttatgtttcaattaccattgagggagtaagaccc 2587158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 269
Target Start/End: Complemental strand, 24216240 - 24215990
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||| ||||||| |||||  ||| || ||||||| |||||| | ||| |||||    
T  24216240 gtaactagttagtaattaaggaaacaagtgacatcacgacttaaatccgcctagtaactccattcaccttgcaccttggtatggtagacgttgacagggc 24216141  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    | |   |||||||||||||| | ||| |||| ||| | |||||||| | ||||| || ||| |  |||||||||||  ||  ||   | |||||||||||    
T  24216140 ttcttatttgtagaactaccgagagggagagagtgatgtgtacttctaagattcatagatgtgaaaacctttagga--acatggccattatacctttgga 24216043  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaag 269  Q
    ||||||||||| | || || | ||||||||||||| |||||||||| ||||||    
T  24216042 aatttaggaacaccaactttaatttatgtttcaatcacccctaagtaagtaag 24215990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 9291460 - 9291602
Alignment:
Q  11 atcatcagtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctg 109  Q
    |||| |||||||||||| ||||||||||||||||||||||||   ||||||||||||||| ||||| |||| | || ||| ||| |||||  ||| ||||    
T  9291460 atcagcagtaactagttggtaattaaggaaacaagtgacttcatgacttaaatcagcccaataactccattttcctcacaccttagtaagaaagacgctg 9291559  T
Q  110 atagggctgcccgtttgtagaactaccaaaaggaagagtgtgc 152  Q
    ||||||||||| |||| || ||||||| | ||| |||||||||    
T  9291560 atagggctgcctgtttatataactaccgagagggagagtgtgc 9291602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 22565557 - 22565791
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||| |||||||||||||||||||| | ||||| | | ||||||||||||||||||||| || | ||  ||| | |||||||||| | ||| ||||||     
T  22565557 agtaagtagttagtaattaaggaaacta-tgactccacgacttaaatcagcccagtaactccactatt--tac-catggtaaggtaaacgctaatagggt 22565652  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    ||   |||||||||||||| || ||  | ||||| ||||||||||| | ||||| || ||||| |||||||  |||| |||||  | |||||| ||||||    
T  22565653 tgatagtttgtagaactactaagagagatagtgttctatgtacttctaagattcatagatgagagaaccttcgggaacactagcca-tcatacttttgga 22565751  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattaccc 256  Q
    ||| |||||||||||   ||||||||||||| ||||||||    
T  22565752 aatctaggaactctacactaagtttatgtttgaattaccc 22565791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 22849958 - 22850023
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| | ||| |||||||||||||    
T  22849958 cttggtaaggtagacactgataggactgcccgtttgtagaactaccgagagggagagtgtgctatg 22850023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 15467008 - 15466967
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaac 132  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  15467008 cttggtaaggtagacgctgatagggctgcccgtttgtagaac 15466967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 9276845 - 9276913
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||| | ||||| |||||||||||||||  |||||||||||| | || |||||||||||    
T  9276845 catacctttggaaaatcaggaaatctaatttaagtttaaatttcaattacccttgagggagtaagaccc 9276913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 14970060 - 14969998
Alignment:
Q  273 ctgataggcttgtagcaagtgtaccaaaactatcgaagtaat-aattaaattcgtatccatga 334  Q
    ||||||| ||| |||||||||||| ||||||||||||||||| || ||| |||||||||||||    
T  14970060 ctgatagacttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccatga 14969998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 10504308 - 10504193
Alignment:
Q  37 ggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac--ttggtaaggtagatgctgatagggctgcccgtttgtagaacta 134  Q
    |||||||||| |||||   ||||||||||| | ||||||||| |||||||| ||   ||||||||||||| |  ||||||| ||||| ||||||||||||    
T  10504308 ggaaacaagttacttcatgacttaaatcagtcgagtaacttcgttcttctttcatcattggtaaggtagacga-gatagggttgcccctttgtagaacta 10504210  T
Q  135 ccaaaaggaagagtgtg 151  Q
    || | ||| ||||||||    
T  10504209 ccgagagggagagtgtg 10504193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 1838707 - 1838663
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||    
T  1838707 gcaagtgaaccaaaattatcgaagtaataaataaattcgtatcca 1838663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 4340380 - 4340336
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| |||||||||| | |||||||||||||||||    
T  4340380 cttggtaaggtagaagctgatagggtttcccgtttgtagaactac 4340336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 14078934 - 14078978
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||    
T  14078934 cttggtaaggtagatgctgatagggctgcttgtttggagaactac 14078978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 19664679 - 19664723
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||    
T  19664679 gcaagtgaaccaaaactatcgaagtaataaataaatttgtatcca 19664723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 23087709 - 23087829
Alignment:
Q  37 ggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttct-tacacttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||| || | ||| |||||||||||||| || ||| |||||||| || ||  |||||||||||||| ||||||| |||| ||||||| || || |||    
T  23087709 ggaaacatgtcatttcacaacttaaatcagctcattaatttcattctcctataatcttggtaaggtagacgctgataaggctacccgtttataaaaatac 23087808  T
Q  136 caaaaggaagagtgtgctatg 156  Q
    | | ||| |||||||| ||||    
T  23087809 cgagagggagagtgtgttatg 23087829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 19245217 - 19245174
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaacta 134  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||    
T  19245217 cttggtaaggtagacgctgatagagcttcccgtttgtagaacta 19245174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 20404292 - 20404343
Alignment:
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaa 268  Q
    ||||||||||||||||||||||| | ||||||||||||| || || ||||||    
T  20404292 aatttaggaactctaatttaagtctttgtttcaattacctctgagagagtaa 20404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 6514355 - 6514313
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  6514355 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 6514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 9291640 - 9291682
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgttt 247  Q
    |||||||||||||||  ||||||||||||||||||||| ||||    
T  9291640 catacctttggaaatccaggaactctaatttaagtttaagttt 9291682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 14966579 - 14966537
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  14966579 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 14966537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 11177574 - 11177533
Alignment:
Q  94 ggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  11177574 ggtaaggtagatgttgatagggctgctcgtttgtataactac 11177533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 264
Target Start/End: Original strand, 23645232 - 23645400
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaat 194  Q
    |||||||||| ||||||  | ||||| |||||||||||||| || ||  |||||||| |||||||||  | ||||| || ||||| ||||||| | |||     
T  23645232 gtaaggtagacgctgattagactgcctgtttgtagaactactaagagagagagtgtgttatgtacttataagattcatagatgagagaaccttcatgaac 23645331  T
Q  195 actaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtga 264  Q
    ||  |    ||||| |||||||||| |||||||||||    ||||||||||||||| ||| ||| |||||    
T  23645332 ac-cgcccatcatatctttggaaatctaggaactctaccccaagtttatgtttcaaatacgcctgagtga 23645400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 28849195 - 28849131
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaata--attaaattcgtatccatgatg 336  Q
    |||||| ||| |||||||||| | ||||||||| ||||||||  |||||||| ||||||||||||    
T  28849195 tgatagacttttagcaagtgtgctaaaactatcaaagtaatacaattaaattagtatccatgatg 28849131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 138
Target Start/End: Complemental strand, 34479181 - 34479152
Alignment:
Q  109 gatagggctgcccgtttgtagaactaccaa 138  Q
    ||||||||||||||||||||||||||||||    
T  34479181 gatagggctgcccgtttgtagaactaccaa 34479152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 1635622 - 1635578
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| ||||||| || || ||||||||||||||||    
T  1635622 cttggtaaggtagacgctgatatggttgtccgtttgtagaactac 1635578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 11411113 - 11411069
Alignment:
Q  288 caagtgtaccaaaa-ctatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||| |||||||||||||||| || ||||||||||    
T  11411113 caagtgtaccaaaaactatcgaagtaataataaagttcgtatcca 11411069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 15535279 - 15535243
Alignment:
Q  295 accaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  15535279 accaaaattatcgaagtaataaataaattcgtatcca 15535243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 15540801 - 15540765
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaatt 323  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  15540801 gcaagtgaaccaaaactatcgaagtaataaataaatt 15540765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 18074815 - 18074859
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| | |||||| ||||||||||| |||||||||    
T  18074815 cttggtaaggtagacgttgatagtgctgcccgtttttagaactac 18074859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 22409788 - 22409832
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||||||||||  ||||||| | |||||||||||||||||||    
T  22409788 cttggtaaggtagactctgatagagttgcccgtttgtagaactac 22409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 22564360 - 22564480
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggct 117  Q
    |||||||||| |||||||| ||||| |||| ||| | |||||||||||| || ||||| ||  |||||| ||| |||||||||| ||   | ||| ||||    
T  22564360 taactagttattaattaagcaaacatgtgatttcacgacttaaatcagcacaataactccacccttctttcactttggtaaggtggacaattataaggct 22564459  T
Q  118 gcccgtttgtagaactaccaa 138  Q
    |||  |||||| |||||||||    
T  22564460 gccaatttgtaaaactaccaa 22564480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 22568481 - 22568434
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaa 139  Q
    |||||||||||| | ||||||||||||| |||||||||||| |||||||    
T  22568481 cttggtaaggtatacgctgatagggctg-ccgtttgtagaattaccaaa 22568434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 32427529 - 32427489
Alignment:
Q  289 aagtgtaccaaaactatcgaagtaataattaaattcgtatc 329  Q
    ||||| |||||||||||||||||||||| |||||| |||||    
T  32427529 aagtgaaccaaaactatcgaagtaataaataaatttgtatc 32427489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 26291779 - 26291523
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||| || |||| ||||||||||||| ||| ||||||    
T  26291779 agtaattagttagtaattaaggaaacaagtgacttcacgacttaaatcagcccaataactccattctcctcacactttggtaaggtagacgctcataggg 26291680  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    ||| | ||||||| ||||||| | | | |||||||| |||||||||| | ||||| || ||||| ||||||||||||| ||| |     |||||||||||    
T  26291679 ctgtcagtttgtaaaactaccgagaaggagagtgtgttatgtacttctaagattcatagatgagagaacctttaggaacact-gaccaccatacctttgg 26291581  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  26291580 aaatttaggaactctaatttaagtttatgttttaattacccctaaggtagtaagaccc 26291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 27418928 - 27418673
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacact-tggtaaggtagatgctgatagggct 117  Q
    ||||||||||||||||||||||||| |||||||  | |||||||| ||||||  |||| |||| ||||| |||  |||||||||||| || ||||||| |    
T  27418928 taactagttagtaattaaggaaacaggtgactttacgacttaaatgagcccaaaaactccattattctttcaccctggtaaggtagacgcggatagggat 27418829  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaa 217  Q
      ||||||||| ||||||  | ||||||| |||| |||||| ||| | ||||| || |||||||||| ||||| || |||||||||||||||||||||||    
T  27418828 aaccgtttgtacaactactgagaggaagaatgtgttatgtatttctaagattcatagatgagggaacatttagaaacactaggaagtcatacctttggaa 27418729  T
Q  218 atttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  27418728 atttaggaactctaatttaagtttatgtttcaattacccctgtgcgagtaagaccc 27418673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 25939841 - 25939584
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||| ||||||||||||||||||||| ||||||||   |||||||| || ||||||| | |||||| ||| ||| ||||||||||||| |||||||||     
T  25939841 agtaattagttagtaattaaggaaacatgtgacttcatgacttaaataagtccagtaattccattctcctttcaccttggtaaggtagacgctgataggt 25939742  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    || |||||||||||||||||| | ||| ||||||| |||||| |||  | ||||| || ||||||||||||||||||| | | ||| | |||||||||||    
T  25939741 ctccccgtttgtagaactaccgagagggagagtgttctatgttcttttaagattcatagatgagggaacctttaggaacattgggaggccatacctttgg 25939642  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||  |||||||||||||||||||||||||||  | ||||||||||||||    
T  25939641 aaatttaggaatgctaatttaagtttatgtttcaattacctttgagtgagtaagaccc 25939584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 27420074 - 27419820
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacact-tggtaaggtagatgctgatagggct 117  Q
    ||||||||||||||||||||||||| |||||||  | |||||||| ||||||  |||| |||| ||||| |||  |||||||||||| ||  |||||| |    
T  27420074 taactagttagtaattaaggaaacaggtgactttacgacttaaatgagcccaaaaactccattattctttcaccctggtaaggtagacgcgaatagggat 27419975  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaa 217  Q
      ||||||||| ||||||  | ||||||| |||| |||||| ||| | ||||| || |||||||||| ||||| || |||||||||||||||||||||||    
T  27419974 aaccgtttgtacaactactgagaggaagaatgtgttatgtatttctaagattcatagatgagggaacatttagaaacactaggaagtcatacctttggaa 27419875  T
Q  218 atttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagacc 272  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  27419874 atttaggaactctaatttaagtttatgtttcaattacccctgtgcgagtaagacc 27419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 45553837 - 45553583
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||| |||||||| |||||| || |||| ||||||||||||  |||||||||||    
T  45553837 gtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcagcacagtaactccattctcctcacaccttggtaaggtagtcgctgatagggc 45553738  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    ||||| |||||||||||||||| |||||||||||| |||| ||| | | ||||| || ||| |  |||||||||||| ||| ||    ||||||||||||    
T  45553737 tgcccatttgtagaactaccaagaggaagagtgtgttatgcactcctaagattcatagatgggaaaacctttaggaacact-ggccaccatacctttgga 45553639  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagacc 272  Q
    ||||||||||| |    |||||||||||||||||||||| || || ||||||||||    
T  45553638 aatttaggaacgccgtattaagtttatgtttcaattacctctgagggagtaagacc 45553583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 45621308 - 45621454
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||| | |||||||||||| ||  || |||||||||||||| | ||||||||    
T  45621308 agtaactagttagtaattaaggaaacaagttacttcacgacttaaatcagcctactaacttcattctcctcgcaccttggtaaggtagacgttgataggg 45621407  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
     || ||||||||||||||||||| ||||||| |||  ||||||||||    
T  45621408 ttgtccgtttgtagaactaccaagaggaagattgtcttatgtacttc 45621454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 21072157 - 21072296
Alignment:
Q  16 cagtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagg 114  Q
    ||||||||||||||||||| |||||||||||||||||   ||||||||||||| ||||||| |||||| || | | || ||||||||||||| |||||||    
T  21072157 cagtaactagttagtaattgaggaaacaagtgacttcatgacttaaatcagcctagtaactccattctcctcatacctcggtaaggtagatgatgatagg 21072256  T
Q  115 gctgcccgtttgtagaactaccaaaaggaagagtgtgcta 154  Q
    ||||  |||| ||||||||||| | | | |||||||||||    
T  21072257 gctggtcgttagtagaactaccgagaagcagagtgtgcta 21072296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 25348709 - 25348568
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacactt-ggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||||    | ||| |||||||| | |||||||||||||||||||||||||||| ||   || | ||||||||||| ||||||||||    
T  25348709 agtaactagttagtaatttgaaagacaggtgacttcacgacttaaatcagcccagtaacttcattctcctcgaacctcggtaaggtagacgctgataggg 25348610  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgt 157  Q
    |||| |||||||||||||||  | ||| |||||||| |||||    
T  25348609 ctgctcgtttgtagaactactgagagggagagtgtgttatgt 25348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 21078202 - 21078270
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||||| ||| |||||||||||    
T  21078202 catacctttggaaatttaggaacacaaacttaagtttatgtttcaattaccccaaagggagtaagaccc 21078270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 16075830 - 16075964
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||  ||||||||||||  ||||| ||  || |||||| |||||||  |||||||||     
T  16075830 gtaactagttagtaattaaggaaacaagtaacttcacgacttaaaatagcccagtaactcaattctcctcgcaccttggtgaggtagacactgataggga 16075929  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtg 151  Q
    |  | ||||||||||||||| | ||| ||||||||    
T  16075930 tatctgtttgtagaactaccgagagggagagtgtg 16075964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 8502523 - 8502643
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||| ||| ||||| |||||||| | ||||||||||  ||| |||||||||||| |  ||| |||| |||||||||   |||| |||    
T  8502523 agtaactagttagtaatcaagaaaacatgtgacttcacgacttaaatcaatccattaacttcattctccgcacaccttgttaaggtagacattgattggg 8502622  T
Q  116 ctgcccgtttgtagaactacc 136  Q
     || |||||||||||||||||    
T  8502623 ttgtccgtttgtagaactacc 8502643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 22568240 - 22568196
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  22568240 cttggtaaggtagacgctgatagggctgcccgtttgtagaactac 22568196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 29028021 - 29027970
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  29028021 tcatacctttggaaatttaggaacgccaatttaagtctatgtttcaattacc 29027970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 19199613 - 19199671
Alignment:
Q  78 cattcttctt-acacttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||| || |||||||||||||| |||||||||||||||| |||||||||||||    
T  19199613 cattcttcttgacccttggtaaggtagacgctgatagggctgcccatttgtagaactac 19199671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 41789984 - 41790050
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattct 83  Q
    |||||||||||||||||||| |||||| ||||||||   |||||| ||||| |||||||||||||||    
T  41789984 agtaactagttagtaattaatgaaacatgtgacttcatgacttaactcagctcagtaacttcattct 41790050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23006688 - 23006740
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaagga 143  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||| ||||    
T  23006688 cttggtaaggtagaaactgatagggttgcccgtttgtagaactaccaagagga 23006740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 23673358 - 23673402
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  23673358 gcaagtgaaccaaaactatcgaagtaataaataaattcgtatcca 23673402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 36327158 - 36327114
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  36327158 gcaagtgaaccaaaactatcgaagtaataaataaattcgtatcca 36327114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 45621472 - 45621527
Alignment:
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagac 271  Q
    |||||||||||| | ||||||||| |||||||||||||||||| || |||||||||    
T  45621472 aaatttaggaacgccaatttaagtctatgtttcaattacccctgagggagtaagac 45621527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 18932919 - 18932852
Alignment:
Q  70 agtaacttcattcttcttaca--cttggtaaggtagatgctgatagggctgcccgtttgtagaactacc 136  Q
    |||||||| ||||||||||||  ||||||||||||||||  |||| ||| |||||||||||||||||||    
T  18932919 agtaactttattcttcttacatccttggtaaggtagatga-gatatggcagcccgtttgtagaactacc 18932852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 32085978 - 32085937
Alignment:
Q  94 ggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  32085978 ggtaaggtagacgctgatagagctgcccgtttgtagaactac 32085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23011216 - 23011268
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaagga 143  Q
    |||||| | ||||| |||||||||||||||| |||||||||||||||| ||||    
T  23011216 cttggtgaagtagacgctgatagggctgcccatttgtagaactaccaagagga 23011268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 24384938 - 24384981
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaat--aattaaattcgtat 328  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  24384938 gcaagtgtaccaaaactatcgaagtaataaaattaaattcgtat 24384981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 1503202 - 1503249
Alignment:
Q  285 tagcaagtgtaccaaaactatcgaagtaat-aattaaattcgtatcca 331  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||    
T  1503202 tagcaagtgtactaaaactatcgaagtaataaaataaattcgtatcca 1503249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 1506406 - 1506453
Alignment:
Q  285 tagcaagtgtaccaaaactatcgaagtaat-aattaaattcgtatcca 331  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||    
T  1506406 tagcaagtgtactaaaactatcgaagtaataaaataaattcgtatcca 1506453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 9761900 - 9761947
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    ||||| |||||||| |||||||||||| || |||||||||||||||||    
T  9761900 cttggcaaggtagacgctgatagggcttcctgtttgtagaactaccaa 9761947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 20174817 - 20174750
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
    |||||||| | | |||||||| |||| |||| |||||||||| | ||||||||||||||||| |||||    
T  20174817 gtaaggtacacgatgatagggatgcctgtttctagaactaccgagaggaagagtgtgctatgaacttc 20174750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 29031817 - 29031770
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    |||||||||||||| | |||||||| || |||||||||||||||||||    
T  29031817 cttggtaaggtagacgttgatagggttgtccgtttgtagaactaccaa 29031770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 20173279 - 20173321
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaact 133  Q
    |||||||||||||| | ||||||||||||| ||||||||||||    
T  20173279 cttggtaaggtagacgttgatagggctgcctgtttgtagaact 20173321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 23933232 - 23933278
Alignment:
Q  209 cctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    ||||||||||  ||||||| | |||||||||||||||||||||||||    
T  23933232 cctttggaaacctaggaacgccaatttaagtttatgtttcaattacc 23933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 24534033 - 24533987
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaat 63  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||||    
T  24534033 agtaactagttagtaattaaggaaaaaaatgacttcacgacttaaat 24533987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 13777063 - 13777018
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactacc 136  Q
    |||||||||||||| |||||||||||  ||||||||||||| ||||    
T  13777063 cttggtaaggtagacgctgatagggcatcccgtttgtagaaatacc 13777018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 20174895 - 20174862
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttc 52  Q
    ||||||||||| ||||||||||||||||||||||    
T  20174895 taactagttagcaattaaggaaacaagtgacttc 20174862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 12950442 - 12950474
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgact 50  Q
    |||||| ||||||||||||||||||||||||||    
T  12950442 gtaacttgttagtaattaaggaaacaagtgact 12950474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 17350063 - 17350031
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgact 50  Q
    |||||||||||||||||||||||||||| ||||    
T  17350063 gtaactagttagtaattaaggaaacaagcgact 17350031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 17742932 - 17742960
Alignment:
Q  19 taactagttagtaattaaggaaacaagtg 47  Q
    |||||||||||||||||||||||||||||    
T  17742932 taactagttagtaattaaggaaacaagtg 17742960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 25887357 - 25887401
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| |||||||||| ||||  |||||||||||||    
T  25887357 cttggtaaggtagacgctgatagggttgccgatttgtagaactac 25887401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 31804193 - 31804221
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagt 46  Q
    |||||||||||||||||||||||||||||    
T  31804193 gtaactagttagtaattaaggaaacaagt 31804221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 32575698 - 32575742
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||||    
T  32575698 gcaagtgaaccaacactattgaagtaataaataaattcgtatcca 32575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 9e-58; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 17442932 - 17442675
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||||||| ||||| ||||||||   |||||||| |||||||||||||  || |||||  || ||||||||||||| ||||||||||    
T  17442932 agtaactagttagtaattaagaaaacaggtgacttcaggacttaaataagcccagtaactttgtttttcttttaccttggtaaggtagacgctgataggg 17442833  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
     | |||||||||||||||||| | |||  |||||||||||||||||| | ||||| || |||| |||||||||||||||| | ||||||||||||||||     
T  17442832 tttcccgtttgtagaactaccgagagggcgagtgtgctatgtacttctaagattcatagatgaaggaacctttaggaatattgggaagtcatacctttga 17442733  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||| | |||||||||||||| |||||||  |||||| || || |||||||||||    
T  17442732 aaatttaagtactctaatttaagtatatgttttgattaccactgagcgagtaagaccc 17442675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 34481649 - 34481394
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    |||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||| |||||| ||  ||| || |||||||||  | |||||||||    
T  34481649 gtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcaacccaataactgcattctcctcgcacattcgtaaggtaggcgttgatagggc 34481550  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    | || ||||||||||||||| | ||| |   ||||||||||||| | | ||||| || ||| |  |||||||||||| | | || | |||||||||||||    
T  34481549 tacctgtttgtagaactaccgagagggatgatgtgctatgtactcctaagattcatatatgggaaaacctttaggaacattgggca-tcatacctttgga 34481451  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||| | || ||||||||||||||||||||||| | || |||||||||||    
T  34481450 aatttaggaacgccaacttaagtttatgtttcaattacccgtgagagagtaagaccc 34481394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 16787137 - 16787390
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttct-tacacttggtaaggtagatgctgatagggc 116  Q
    ||||||||||| |||||||||||||||||||||||   ||||||||||||| | |||||||||||  || ||  |||||||||||||| |||||||||||    
T  16787137 gtaactagttattaattaaggaaacaagtgacttcatgacttaaatcagcctaataacttcattcacctataaccttggtaaggtagacgctgatagggc 16787236  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    |||||||||||| ||||||| | ||| ||| ||||||||||||| | | ||||| ||  || |  || ||||||||| |||  |   | |||||||||||    
T  16787237 tgcccgtttgtataactaccgagagg-agaatgtgctatgtactcctaagattcatagctgggaaaatctttaggaacact--gccatgatacctttgga 16787333  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||| |||| | || |||||| |||||||||||||||||  || |||||||||||    
T  16787334 aatttatgaacaccaacttaagtctatgtttcaattacccccgagggagtaagaccc 16787390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 273
Target Start/End: Complemental strand, 15299698 - 15299455
Alignment:
Q  28 agtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgtttg 126  Q
    ||||| ||||||||||| |||||||   |||||||||| ||||  ||||||||| ||||  ||| ||||||||||||| | |||||||| || | |||||    
T  15299698 agtaagtaaggaaacaattgacttcgtgacttaaatcatccca--aacttcattattctcgcaccttggtaaggtagacgatgatagggttgtctgtttg 15299601  T
Q  127 tagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaatttaggaa 226  Q
    |||||||||| |  || || ||||| | |||||||| | || || || ||||| |||||||||| || |||||  |  ||||||||||||||||||||||    
T  15299600 tagaactaccgagtgggagggtgtgttgtgtacttctaagactcatagatgagagaacctttagaaacactagctaa-catacctttggaaatttaggaa 15299502  T
Q  227 ctctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||| |||||| || | || |||||||||||    
T  15299501 ctctaatttaagtttatgttccaattatccttgagggagtaagaccc 15299455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 16113609 - 16113464
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    ||||||||||||||||||||||||||||||||||  | ||||||| || |||| ||| | |||| |||| ||| |||||||||||||| ||||||||||     
T  16113609 gtaactagttagtaattaaggaaacaagtgactttacgacttaaagcaacccaataaatccatttttctcacaccttggtaaggtagacgctgatagggt 16113510  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
    || | ||||||||||||| | ||||  | ||||||||| |||||||    
T  16113509 tgactgtttgtagaactatcgaaagagaaagtgtgctaggtacttc 16113464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 17837947 - 17837888
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaact 76  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  17837947 agtaactagttagtaattaaggaaacaagtgacttcacgacttaaatcatcccagtaact 17837888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 254
Target Start/End: Complemental strand, 22620965 - 22620739
Alignment:
Q  23 tagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggctgcccg 122  Q
    |||||||||||||||||||  |  ||||||  |||||||||||||||| ||||| |||||||    | ||| || ||||||| || ||||||| || | |    
T  22620965 tagttagtaattaaggaaaataa-gacttcagaacttaaatcagcccaataactccattcttt---cccttagttaggtagacgcggatagggttgtctg 22620870  T
Q  123 tttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaattta 222  Q
    ||||||||||||  || || || | |||| |||||||||| | |||||  | || || ||||||| ||||| |||||    |||||||||||||||| ||    
T  22620869 tttgtagaactattaagagaaatattgtgatatgtacttctaagattcagagataagagaaccttcaggaacactagcct-tcatacctttggaaatcta 22620771  T
Q  223 ggaactctaatttaagtttatgtttcaattac 254  Q
    |||||||||   |||||||||||| |||||||    
T  22620770 ggaactctaccctaagtttatgttgcaattac 22620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 24281918 - 24281871
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  24281918 cttggtaatgtagacgctgatagggctgcccgtttgtagaactaccaa 24281871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 13134667 - 13134727
Alignment:
Q  212 ttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagacc 272  Q
    ||||||||||| |||||| |||||||||||||| |||||||||| || || ||||||||||    
T  13134667 ttggaaatttaagaactcaaatttaagtttatgcttcaattacctctgagagagtaagacc 13134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 13496218 - 13496175
Alignment:
Q  288 caagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  13496218 caagtgaaccaaaactatcgaagtaataaataaattcgtatcca 13496175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 12209215 - 12209165
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaag 141  Q
    |||||||||||||| | |||||||||||||||||| |||||||||| ||||    
T  12209215 cttggtaaggtagacgttgatagggctgcccgtttttagaactaccgaaag 12209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 28008747 - 28008705
Alignment:
Q  92 ttggtaaggtagatgctgatagggctgcccgtttgtagaacta 134  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  28008747 ttggtaaggtagacactgatagggctgcccgtttgtagaacta 28008705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 14240208 - 14240289
Alignment:
Q  56 acttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgtttgtagaactacc 136  Q
    |||||||||||| || | |||||||||||||| ||| ||||||||||||| | | |||||||||||  |||||| |||||||    
T  14240208 acttaaatcagcacaattacttcattcttcttgcaccttggtaaggtagacgttaatagggctgcctttttgtataactacc 14240289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 16360509 - 16360444
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    |||||||||||||| | |||||| ||||| |||||||||||||||| | ||| ||| |||||||||    
T  16360509 cttggtaaggtagacgttgatagagctgctcgtttgtagaactaccgagagggagaatgtgctatg 16360444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 25960623 - 25960671
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaa 139  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||||    
T  25960623 cttggtaaggtagacactgatagggctgctagtttgtagaactaccaaa 25960671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 33191319 - 33191275
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||    
T  33191319 cttggtaaggtagacgctgatagggctacccgtttatagaactac 33191275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 16112355 - 16112320
Alignment:
Q  94 ggtaaggtagatgctgatagggctgcccgtttgtag 129  Q
    |||||||||||||||||| |||||||||||||||||    
T  16112355 ggtaaggtagatgctgattgggctgcccgtttgtag 16112320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 16190193 - 16190236
Alignment:
Q  288 caagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||| | |||||||||||||||||||| ||||||||||||||    
T  16190193 caagtgaatcaaaactatcgaagtaataaataaattcgtatcca 16190236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 28008827 - 28008792
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttct 53  Q
    |||||||||||| |||||||||||||||||||||||    
T  28008827 gtaactagttagaaattaaggaaacaagtgacttct 28008792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 34552452 - 34552495
Alignment:
Q  288 caagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||||||||||||||||||||| |||| || ||||||||||    
T  34552452 caagtgtaccaaaactatcgaagtagtaataaagttcgtatcca 34552495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 16112256 - 16112210
Alignment:
Q  209 cctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    ||||||||||  ||||||| | |||||||||||||||||||||||||    
T  16112256 cctttggaaacctaggaacaccaatttaagtttatgtttcaattacc 16112210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 22664797 - 22664759
Alignment:
Q  96 taaggtagatgctgatagggctgcccgtttgtagaacta 134  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  22664797 taaggtagacgctgatagggctgcctgtttgtagaacta 22664759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 44796023 - 44795965
Alignment:
Q  78 cattcttctt-acacttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||| || |||||||||||||| | |||||||  |||||||||||||||||||    
T  44796023 cattcttcttgacccttggtaaggtagacgttgataggattgcccgtttgtagaactac 44795965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 15297559 - 15297515
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||||    
T  15297559 gcaagtgtaccaaaactatcgaagtagtaaatgaattcatatcca 15297515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 26021376 - 26021332
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||| ||| || | ||||||||||||||||||||||||||||    
T  26021376 cttggtatggtggacgttgatagggctgcccgtttgtagaactac 26021332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 26648499 - 26648559
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtg 151  Q
    |||||||||||| | |||||||| ||| ||||||||||||||| || | ||| ||||||||    
T  26648499 cttggtaaggtaaacgctgatagtgctccccgtttgtagaactgccgagagggagagtgtg 26648559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 31235345 - 31235377
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgact 50  Q
    |||||||||||||||||||||||||||| ||||    
T  31235345 gtaactagttagtaattaaggaaacaagcgact 31235377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 32505870 - 32505914
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| |||  |||||||||    
T  32505870 gcaagtgaaccaaaactatcgaagtaataaataagatcgtatcca 32505914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 49716721 - 49716677
Alignment:
Q  288 caagtgtaccaaaa-ctatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||| |||||||||||||||| || ||||||||||    
T  49716721 caagtgtaccaaaaactatcgaagtaataataaagttcgtatcca 49716677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 49720203 - 49720159
Alignment:
Q  288 caagtgtaccaaaa-ctatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||| |||||||||||||||| || ||||||||||    
T  49720203 caagtgtaccaaaaactatcgaagtaataataaagttcgtatcca 49720159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 4580 - 4349
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||| ||  || |||| ||||||||||||| ||||||    
T  4580 agtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcagcccaataacttcattctcctcgcaccttgataaggtagatgctaataggg 4481  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    |||||||| |||||||||||| | ||| ||||||||||||||||||| | ||| | || |||   |||||||||| || ||| |  ||||||||||||||    
T  4480 ctgcccgtgtgtagaactaccgagagggagagtgtgctatgtacttctaagatgcatagatgctagaacctttagtaacacttgctagtcatacctttgg 4381  T
Q  216 aaatttaggaactctaatttaagtttatgttt 247  Q
    ||||||| |||||  |||||||||||||||||    
T  4380 aaatttacgaacttcaatttaagtttatgttt 4349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 274
Target Start/End: Complemental strand, 24905337 - 24905080
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||| |||| ||| | |||||| ||  ||| |||||||||||||  |||||||||    
T  24905337 agtaactagttagtaattgaggaaacaagtgacttcaccacttaaatcaacccaataagtccattctcctcgcaccttggtaaggtagacactgataggg 24905238  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    ||||| ||||||||||||||| | ||  ||||||| |||||||||||   ||||| || ||||| ||||||| || || | | ||   |||||||||| |    
T  24905237 ctgcctgtttgtagaactaccgagagatagagtgttctatgtacttcttagattcatatatgagagaaccttgagtaacaat-ggtcatcatacctttag 24905139  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccct 274  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  24905138 aaatttaggaattctaatttaagtttatgtttcaattacccctaagggagtaagaccct 24905080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 271
Target Start/End: Complemental strand, 17977310 - 17977062
Alignment:
Q  23 tagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgccc 121  Q
    |||||| |||||| | |||||||||||||| | ||||||||||||| ||||||| |||||| ||| ||| ||||||||| ||| |||||||||||| |||    
T  17977310 tagttattaattatgaaaacaagtgacttcacgacttaaatcagcctagtaactccattctccttgcaccttggtaaggcagacgctgatagggcttccc 17977211  T
Q  122 gtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaattt 221  Q
    ||||||| ||||||| | ||| | ||||||||||||||||| | ||||| || ||  | ||||||||| ||| |||||  |  |||||||||||||||||    
T  17977210 gtttgtaaaactaccgagagggatagtgtgctatgtacttctaagattcatagattggagaacctttacgaacactagccac-catacctttggaaattt 17977112  T
Q  222 aggaactctaatttaagtttatgtttcaattacccctaagtgagtaagac 271  Q
    ||||| || |||||||||||||||||||||||||||| |  |||||||||    
T  17977111 aggaaatccaatttaagtttatgtttcaattacccctgatggagtaagac 17977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 5052317 - 5052571
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||||||||| ||||||||||||||||||||||||   |||||||| | ||||||| || |||||| ||  ||| ||||||||||||||||||||||||    
T  5052317 agtaactagttggtaattaaggaaacaagtgacttcatgacttaaattaacccagtagctccattctcctcgcaccttggtaaggtagatgctgataggg 5052416  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
     |||| ||||||||||||||  |  || |||||||| |||||||||| | || ||  ||||||| ||||| ||||||| | | |     |||| ||| ||    
T  5052417 ttgcctgtttgtagaactacagagtgggagagtgtgttatgtacttctaagactc--aaatgagagaaccattaggaaca-ttgaccaccataacttggg 5052513  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||||||||| |||||||||||| |||| ||| | || |||||||||||    
T  5052514 aaatttaggaactctaattcaagtttatgttttaattgcccttgagggagtaagaccc 5052571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 5855798 - 5855639
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggct 117  Q
    |||||| ||||||||||||||||||||||||||  | |||||||| |||||||||||| |  | ||||| || || |||||||| || |||| || || |    
T  5855798 taactatttagtaattaaggaaacaagtgactttgcgacttaaattagcccagtaactccgcttttctttcacctcggtaaggtggacgctggtaaggtt 5855699  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatg 177  Q
    ||||||||||||||||||  | ||| |||||||| ||||| |||| | ||||| ||||||    
T  5855698 gcccgtttgtagaactactgagagggagagtgtgttatgtgcttctaagattcataaatg 5855639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 17965674 - 17965539
Alignment:
Q  59 taaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgt 157  Q
    |||||||| | | |||||||||||| ||| ||| ||||||||||||| ||||||||||||| | |||||||||| ||| || ||| |||||||| |||||    
T  17965674 taaatcagtcaattaacttcattctcctttcaccttggtaaggtagacgctgatagggctgtctgtttgtagaattactaagagggagagtgtgttatgt 17965575  T
Q  158 acttcaaggattcctaaatgagggaacctttaggaa 193  Q
    ||||| | ||||| || || |||| |||||||||||    
T  17965574 acttctaagattcatagataagggtacctttaggaa 17965539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 15064754 - 15064899
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacact-tggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||| | | ||||| | |||||| | ||||| ||||||| || | || || ||||||| |||  |||||||||||| ||||||| ||    
T  15064754 agtaactagttagtaatga-gaaaacaggcgacttcacgacttagatcagcctagcatctccactcttctttcaccatggtaaggtagacgctgataagg 15064852  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
    ||||| ||||||||||||||| | ||| |||||||||||||| ||||    
T  15064853 ctgcctgtttgtagaactaccgagagggagagtgtgctatgtgcttc 15064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 6885612 - 6885554
Alignment:
Q  78 cattcttctta-cacttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  6885612 cattcttcttaacccttggtaaggtagacgctaataaggctgcccgtttgtagaactac 6885554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 30121729 - 30121799
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccct 274  Q
    ||||||||||| |||||||||||| | ||||||||| |||||||||| ||||  | || ||||||||||||    
T  30121729 tcatacctttgaaaatttaggaacgccaatttaagtctatgtttcaactaccattgagagagtaagaccct 30121799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 30486916 - 30486850
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattct 83  Q
    |||||||| |||||||||||| ||||| ||||||||   ||||||||||| ||| ||||||||||||    
T  30486916 agtaactaattagtaattaagaaaacacgtgacttcatgacttaaatcagtccaataacttcattct 30486850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 26614849 - 26614906
Alignment:
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||||||| |||| |||||||||   |||| |||||||||||    
T  26614849 aaatttaggaactctaatttaagtatatgcttcaattacttttaagagagtaagaccc 26614906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 24381220 - 24381323
Alignment:
Q  32 attaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggctgcccgtttgtaga 130  Q
    |||||| ||||||||||||||   ||||||||||||| ||||||| |||||| ||  || |||| ||||||||  |||||||| |||||| || |||| |    
T  24381220 attaagtaaacaagtgacttcatgacttaaatcagccaagtaactccattctcctcgcatcttgctaaggtaggagctgatagtgctgcctgtgtgtaaa 24381319  T
Q  131 acta 134  Q
    ||||    
T  24381320 acta 24381323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 14076000 - 14075970
Alignment:
Q  217 aatttaggaactctaatttaagtttatgttt 247  Q
    |||||||||||||||||||||||||||||||    
T  14076000 aatttaggaactctaatttaagtttatgttt 14075970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 31981709 - 31981667
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  31981709 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 31981667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 31986636 - 31986594
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  31986636 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 31986594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25181915 - 25181956
Alignment:
Q  94 ggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||| ||||| |||||||||| |||||||||||||||||||    
T  25181915 ggtaatgtagacgctgatagggttgcccgtttgtagaactac 25181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 21315266 - 21315222
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||| ||||||||| |||||||| | |||||||||||||||||||    
T  21315266 cttgataaggtagacgctgatagtgttgcccgtttgtagaactac 21315222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 24645476 - 24645412
Alignment:
Q  92 ttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||||||||||| | |||||||| || ||||||||||||||| | | ||| ||||||| |||||    
T  24645476 ttggtaaggtagacgttgataggggtgtccgtttgtagaactaacgagagggagagtgtcctatg 24645412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 39659725 - 39659769
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||||||| |||||||||||||| |||| || ||||||||||    
T  39659725 gcaagtgtaccgaaactatcgaagtagtaataaagttcgtatcca 39659769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 11520523 - 11520779
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||| |||||||||||||||||||||| ||||||  | |||| |||||||||||||||| |||||||||| ||| ||  ||||||||| ||||||||||    
T  11520523 agtaagtagttagtaattaaggaaacaattgacttaacgacttcaatcagcccagtaactccattcttcttgcacctttctaaggtagacgctgataggg 11520622  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
     ||  ||||||||||||| || | | |  ||||||| | ||| |||| | ||||  || ||||||||| ||||| ||||||||| |||||||||||||||    
T  11520623 ttgttcgtttgtagaacttccgagatggtgagtgtgttgtgtgcttctaagatttatagatgagggaatctttacgaatactag-aagtcatacctttgg 11520721  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||| ||||||||| |||||| |||||||||||| |||  |||||||||||    
T  11520722 aaatttaggaaatctaatttatgtttatatttcaattacccataaacgagtaagaccc 11520779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 12839182 - 12839413
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||||||||||||| |||||||      ||||||   || ||||||| |||| ||||| ||| ||||||||||||| ||| ||||||    
T  12839182 agtaactagttagtaattaaggaaacaggtgactttatgttttaaattttcctagtaactccattattctttcacattggtaaggtagacgcttataggg 12839281  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
     |||||||||||||||||||| | ||| |||||||| |||||||||| | ||||   | |||||| |||||||||||| ||| ||||||||||||||||     
T  12839282 atgcccgtttgtagaactaccgagagggagagtgtgttatgtacttctaagatttacagatgaggaaacctttaggaacactgggaagtcatacctttga 12839381  T
Q  216 aaatttaggaactctaatttaagtttatgttt 247  Q
    ||||||||||| ||||||||||||||||||||    
T  12839382 aaatttaggaaatctaatttaagtttatgttt 12839413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 9264404 - 9264658
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggct 117  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||||||||   ||||| |||||| ||    || ||| ||||| |||||||||||| |    
T  9264404 gtaactagttagtaattaaggaaacaaatgacttcacaacctaaatcagcctgataactccattctcctcgacctgggtcaggtaaatgctgatagggtt 9264503  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaa 217  Q
    |||||||| |||||||||||| ||| | | ||||||||||||||| | || || || |||||  || ||||||||| ||||| ||   ||| ||||||||    
T  9264504 gcccgtttatagaactaccaagagggaaaatgtgctatgtacttctaagactcatagatgagaaaaactttaggaacactagcaa-cgatatctttggaa 9264602  T
Q  218 atttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||| | ||||||||| ||||||||||||| | || || |||||||||||    
T  9264603 atttaggaacgccaatttaagtatatgtttcaattaacactgagggagtaagaccc 9264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 9053295 - 9053135
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaat 194  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| || | |  || || ||||  |||||||||||||     
T  9053295 gtaaggtagacgctgatagggctgcccgtttgtagaactaccaagagggagagcgtgctatttacatctaaggctcatagatgaaagaacctttaggaac 9053196  T
Q  195 actaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    | | ||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  9053195 attgggaagccatacctttgaaaatttaggaacgctaatttaagtctatgtttcaattacc 9053135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 1832965 - 1833117
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggct 117  Q
    |||||||||||||||||| |||||  |||| |||   | |||||||||||  |||| |||||||| ||  ||| ||| ||||||||| ||||||||||||    
T  1832965 taactagttagtaattaaagaaactggtgaattcatgagttaaatcagccatgtaagttcattctcctcgcaccttgttaaggtagacgctgatagggct 1833064  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattc 170  Q
    ||||||||||| ||||| | | ||| ||||||||||||||||||||| |||||    
T  1833065 gcccgtttgtaaaactagcgagagggagagtgtgctatgtacttcaaagattc 1833117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 18448355 - 18448499
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||| |||||||||| |||||||| | |||||||| ||||| ||||||||||||| ||| || ||||| |||||||| | |  | |||    
T  18448355 agtaactagttagtaactaaggaaacatgtgacttcacgacttaaattagcccggtaacttcattctccttgcaccttggaaaggtagacgtt--tgggg 18448452  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
    || |||||||||||||||| | | |||  |||||||||||| |||||    
T  18448453 cttcccgtttgtagaactatcgagagggggagtgtgctatgcacttc 18448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 22526979 - 22526724
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    ||||||||  ||||||||| ||||||| |||| ||| | |||||||||||||| |||||||| |||| ||   || |||||||||||||  ||||||| |    
T  22526979 agtaactatgtagtaattagggaaacatgtgatttcacgacttaaatcagccccgtaacttccttctcctcgaaccttggtaaggtagacactgatagag 22526880  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    ||||||||||||| ||| ||  |  |  |||||||| ||||| |||| | ||| | || || || ||||||||| ||| | || ||   ||  |   |||    
T  22526879 ctgcccgtttgtaaaacaactgattgagagagtgtgttatgtgcttctaagatgcatagattagcgaacctttaagaagattatgactaca--ctaatgg 22526782  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
     ||||||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||    
T  22526781 gaatttaggaacgctaatttaagtgtatgtttcaattacctctaagagagtaagaccc 22526724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 25120688 - 25120750
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgct 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||    
T  25120688 cttggtaaggtagatgctgatagggctgcccgtttgtagaactactgagagggagagtgtgct 25120750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 26115297 - 26115550
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattctt-cttaca-cttggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||| |||||||||||||||||   |||| |||||||||||||||| |||| || ||  || || |||||||||||   |||||||     
T  26115297 gtaactagttagtaatttaggaaacaagtgacttcatgactt-aatcagcccagtaactccatttttcctcgcacctcggtaaggtagactttgatagga 26115395  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    || | ||||| |||||||||| | | | |||||||| |||||||| | | |||||||| ||  ||||| ||||||||| ||| ||    |||||||||||    
T  26115396 cttctcgtttatagaactaccgagacggagagtgtgttatgtactcctaagattcctagat--gggaaactttaggaacact-ggccaccatacctttgg 26115492  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||| |||||| | || |||| |  ||| |||||||||| || || |||||||||||    
T  26115493 aaattcaggaacgccaacttaaatcaatgattcaattacctctgagggagtaagaccc 26115550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 5529146 - 5529028
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    ||||||||||||| ||||||| ||||| | ||||||   ||||||||||  ||||||| | |||||||||| || |||||||||||| | ||| ||||||    
T  5529146 agtaactagttagcaattaagtaaacaggcgacttcatgacttaaatcaatccagtaattccattcttctttcaccttggtaaggtaaacgctaataggg 5529047  T
Q  116 ctgcccgtttgtagaacta 134  Q
    || ||||||||| ||||||    
T  5529046 ctacccgtttgttgaacta 5529028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 11700150 - 11700218
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||||| |  |||||||||||||||||||| ||||||  || |||||||||||    
T  11700150 catacctttggaaatttaggaaattcaatttaagtttatgtttcaactacccccgagggagtaagaccc 11700218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 17672626 - 17672582
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  17672626 cttggtaaggtagacgctgatagggctgcccgtttgtagaactac 17672582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 25024131 - 25024034
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttct-tacacttggtaaggtagatgctgatagg 114  Q
    ||||||||||| ||||||||||||||||||||| |   |||||||||| |||||||| | |||||| ||  || |||||||||||||| |||| ||||    
T  25024131 gtaactagttattaattaaggaaacaagtgactgcatgacttaaatcatcccagtaaatccattctcctcgacccttggtaaggtagacgctggtagg 25024034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 30600418 - 30600365
Alignment:
Q  205 catacctttggaaatttaggaactctaatttaagtttatgtttcaattacccct 258  Q
    ||||||||||||||||||||||| | || |||||| ||||||||||||||||||    
T  30600418 catacctttggaaatttaggaacgccaacttaagtctatgtttcaattacccct 30600365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 7612701 - 7612645
Alignment:
Q  212 ttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaa 268  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || || ||||||    
T  7612701 ttggaaatttaggaactctaatttaagtttatgctttaattacctctgagagagtaa 7612645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 4214958 - 4215092
Alignment:
Q  23 tagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggctgcccg 122  Q
    |||||||||||||||||||| |   ||||| | | ||||||||| ||| ||||| |||||| ||| | ||| |||||||||| | |||||||  ||| ||    
T  4214958 tagttagtaattaaggaaactaca-acttcacgatttaaatcagtccaataactccattct-ctttc-cttagtaaggtagacggtgataggattgcacg 4215054  T
Q  123 tttgtagaactaccaaaaggaagagtgtgctatgtact 160  Q
    ||||||||||||| || ||  |||||||||||||||||    
T  4215055 tttgtagaactactaagagagagagtgtgctatgtact 4215092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 5956593 - 5956548
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactacc 136  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||    
T  5956593 cttggtaaggtagacgctaatagggctgcccatttgtagaactacc 5956548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 11780979 - 11780934
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactacc 136  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||    
T  11780979 cttggtatgttagacgctgatagggctgcccgtttgtagaactacc 11780934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 13587906 - 13587842
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcatt 81  Q
    ||||||||||||||||||||| |||||   |||||| | ||||||||||||| | ||||||||||    
T  13587906 agtaactagttagtaattaagaaaacagacgacttcacgacttaaatcagcctaataacttcatt 13587842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 15851524 - 15851480
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||||||||||||||||||||||||| | || ||||||||||    
T  15851524 gcaagtgtaccaaaactatcgaagtaatagtaaagttcgtatcca 15851480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 26062703 - 26062747
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||    
T  26062703 gcaagtgaaccaaaactatcgaaataataaataaattcgtatcca 26062747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 33927328 - 33927269
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaat--aattaaattcgtatcca 331  Q
    |||||| ||| |||||||||||| |||||||||||||||||  |||||| ||||||||||    
T  33927328 tgatagacttttagcaagtgtactaaaactatcgaagtaataaaattaagttcgtatcca 33927269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 9850900 - 9850963
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgcta 154  Q
    ||||||||||||||  ||||||||| || ||||||||||||||||  | ||| |||||||||||    
T  9850900 cttggtaaggtagacactgatagggttgtccgtttgtagaactacagagagggagagtgtgcta 9850963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 14572453 - 14572406
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||||    
T  14572453 cttggtaaggtagacactgatagggtttcccgtttgtagaactaccaa 14572406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 19092942 - 19092895
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    |||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  19092942 cttggtaaggtagacgctgatgtggcttcccgtttgtagaactaccaa 19092895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 5679725 - 5679679
Alignment:
Q  209 cctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    ||||||||||  ||||||| | |||||||||||||||||||||||||    
T  5679725 cctttggaaacctaggaacgccaatttaagtttatgtttcaattacc 5679679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 19636011 - 19636048
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaac 132  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  19636011 gtaaggtagacgctgatatggctgcccgtttgtagaac 19636048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 91 - 274
Target Start/End: Original strand, 58 - 241
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttag 190  Q
    ||||||||||||||  || |||||||| |||||||||||||||||| | |||  |||||||||||||||||| | ||||| || ||||||||| ||||||    
T  58 cttggtaaggtagacactaatagggcttcccgtttgtagaactaccgagagggggagtgtgctatgtacttctaagattcatagatgagggaaactttag 157  T
Q  191 gaatactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccct 274  Q
    ||| ||| ||||||||||||| || ||||||||||| | ||||||| |||||||||||||||||| || |||||||||||||||    
T  158 gaacactgggaagtcatacctatgaaaatttaggaattgtaatttatgtttatgtttcaattaccactgagtgagtaagaccct 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 5530785 - 5530529
Alignment:
Q  16 cagtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagg 114  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||| |||||| |   || ||||||||||||||||| ||||||    
T  5530785 cagtaactagttagtaattaaggaaacaagtggcttcacgacttaaatcagcccaataactccattctccacgcaccttggtaaggtagatgccgatagg 5530686  T
Q  115 gctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttg 214  Q
    | ||||| |||||||||||||| | ||| |||||||| ||||||| |  | ||||| || ||| |  ||| |||||||| ||| ||    ||||| ||||    
T  5530685 ggtgcccatttgtagaactaccgagagggagagtgtgttatgtacatataagattcatagatg-gaaaacatttaggaacact-ggccaacatacatttg 5530588  T
Q  215 gaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||||| |||||||||||    
T  5530587 gaaatttaggaacgccaatttaagtttatgttttaattacccctaagcgagtaagaccc 5530529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 21233174 - 21232922
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacactt-ggtaaggtagatgctgatagggc 116  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||| |||||||| | |||||| ||   |||| ||||||||||| |||||||||||    
T  21233174 gtaactagttagtaattaacgaaacaagtgacttcacgacttaaatcaacccagtaattccattctcctcgtactttggtaaggtagacgctgatagggc 21233075  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    ||| | |||||| |||||   ||||| |||||||| |||||||||| | ||||| || ||| |  |||||||| ||| | ||| ||  ||||||||||||    
T  21233074 tgctcatttgtaaaacta---aaagggagagtgtgatatgtacttctaagattcatagatgggaaaacctttacgaacattagcaac-catacctttgga 21232979  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    ||||||||||| ||||||||||| ||||||||||||||| || || |||||| ||||    
T  21232978 aatttaggaacactaatttaagtctatgtttcaattaccactgagggagtaataccc 21232922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 15612068 - 15612325
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgataggg 115  Q
    |||||| |||||||||||||||||||| |||||||  |||||||||||| | | |||||| |||| ||||| ||| ||||||| ||||| ||||||||||    
T  15612068 agtaacaagttagtaattaaggaaacatgtgactttacaacttaaatcaactcggtaactccatttttctttcaccttggtaaagtagacgctgataggg 15612167  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgg 215  Q
    || |||||||||||||||| | | | | | ||| ||||||||| | | | ||||| || | ||||||||||||||||| | | | ||||||| ||||| |    
T  15612168 ctacccgtttgtagaactatcgagaaggatagtatgctatgtattgctaagattcatagaggagggaacctttaggaacattggcaagtcatgcctttag 15612267  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||| |||||| |||| |||||||||||||||  |||| | |||||||||    
T  15612268 aaatttaggaacgctaattgaagtctatgtttcaattacctttaagcgggtaagaccc 15612325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 31493626 - 31493370
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    ||||||||||| ||||||||||||||||||| |||   ||||||||| || ||| |||| |||||| || | || ||||||||||||| | |||||||||    
T  31493626 gtaactagttattaattaaggaaacaagtgatttcaagacttaaatcggctcagcaactccattctcctcaaaccttggtaaggtagacgttgatagggc 31493527  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaaccttt-aggaatactaggaagtcatacctttgg 215  Q
    |||| |||||||||||||| || ||| |||||||| |||||||| | | ||||| || ||| |  ||||||| ||||| ||| ||   ||||||||||||    
T  31493526 tgcctgtttgtagaactactaagagggagagtgtgttatgtactcctaagattcatagatgggaaaacctttcaggaacact-ggccatcatacctttgg 31493428  T
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||| ||||| || |||||| |||||||||||||||  | || |||||||||||    
T  31493427 aaatttagaaactccaacttaagtctatgtttcaattacctttgagggagtaagaccc 31493370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 265
Target Start/End: Complemental strand, 18496075 - 18495831
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||| ||||||||||||||| |||| | ||||||| | |||||||| |||||| ||||| |||||| ||| | ||||  ||  ||||||||||||||||    
T  18496075 agtaagtagttagtaattaagaaaacta-tgacttcacgacttaaataagcccaataactccattct-ctttc-cttgacaaaatagatgctgatagggc 18495979  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    |||||||||| |||||||| || ||| ||| |||  |||||| ||| | ||||| || ||||||||||||||| ||| | |||  | ||||||||| |||    
T  18495978 tgcccgtttgcagaactactaagagggagaatgtcttatgtatttctaagattcatagatgagggaacctttatgaacattagcca-tcataccttcgga 18495880  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgag 265  Q
    ||||||||||||| || ||||||||||||||||||||| ||| ||||||    
T  18495879 aatttaggaactcgaacttaagtttatgtttcaattacacctgagtgag 18495831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 11218679 - 11218921
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||||| ||| |||||| ||  || |||||||||||| | |||||||||||    
T  11218679 gtaactagttagtaattaaggaaacaagcgacttcatgacttaaatcagcccagttactccattctcctcgcaccttggtaaggtatacgctgatagggc 11218778  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaac--ctttaggaatactaggaagtcatacctttg 214  Q
    | |||||||||||||||||  | | | |||||||| |||||||| |||  |||| |||||| |  |||   |||||||| || |||    | |||||||     
T  11218779 ttcccgtttgtagaactactgataaggagagtgtgttatgtactccaaatattcgtaaatgggaaaacttttttaggaacac-aggtcaccgtaccttta 11218877  T
Q  215 gaaatttaggaactctaatttaagtttatgtttcaattacccct 258  Q
    ||||||||||||| |||| |||||| ||||||||||| ||||||    
T  11218878 gaaatttaggaacgctaacttaagtctatgtttcaatcacccct 11218921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 22338799 - 22339054
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    |||||||  |||||||||| |||||||||||||||   | ||| |||| || ||||||| |||||| ||  ||| ||||||||||| | ||| |||||||    
T  22338799 gtaactaaatagtaattaatgaaacaagtgacttcatgatttatatcatcctagtaactccattctcctcgcaccttggtaaggtatacgctaatagggc 22338898  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    | || ||||||||||||||| | |||||||||||||||||||||   | ||||| || |||    |||||||||||| ||| ||   ||||||||||||     
T  22338899 tacctgtttgtagaactaccgagaggaagagtgtgctatgtactcataagattcatagatggaaaaacctttaggaacact-ggccatcatacctttggg 22338997  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||| |||| | ||||||||| |||||||||||||||| | || |||||||||||    
T  22338998 aatttatgaacaccaatttaagtctatgtttcaattacccttgagggagtaagaccc 22339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 13708187 - 13707931
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    |||||||||||||||||| |||||| |||||||||| | |||||||| ||| |||||||| || |||| || || ||||||||||||||  |||||||||    
T  13708187 agtaactagttagtaattgaggaaataagtgacttcacgacttaaataagctcagtaactccactcttgtttcaccttggtaaggtagacactgataggg 13708088  T
Q  116 ct-gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttg 214  Q
     |  |||||||||| ||||||||| ||| |||||||||||||| |||| | ||||| || ||||| | ||||||| ||| | | |||    | || | |     
T  13708087 ttaccccgtttgtataactaccaagagggagagtgtgctatgtgcttctaagattcatagatgagcggacctttaagaacattggga--ctacacttatc 13707990  T
Q  215 gaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    | ||||||||||  |||| |||||||||||||||||||||| |||||  ||||||||||    
T  13707989 gtaatttaggaaagctaacttaagtttatgtttcaattacctctaagacagtaagaccc 13707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 9501012 - 9500869
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggct 117  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| || |||| ||||| |||||| ||  || |||||||||||||| | |||||||| |    
T  9501012 taactagttagtaattaatgaaacaagtgacttcacgacttaaaccatcccaataactccattctcctcgcaccttggtaaggtagacgttgataggg-t 9500914  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
    | ||||||||||||||||| | ||| ||||| || ||||||||||    
T  9500913 ggccgtttgtagaactaccgagagggagagtttgttatgtacttc 9500869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 18663141 - 18662886
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggc 116  Q
    ||||||||||| |||||||| || || ||||||||   |||||||||| ||||| | ||||||| | || | || ||||||||||||| ||||||||||     
T  18663141 gtaactagttattaattaagaaagcatgtgacttcatgacttaaatcaacccagcatcttcattatcctcaaaccttggtaaggtagacgctgatagggt 18663042  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    || ||||||||||||||||| ||||| |||||||| ||  |||| | | ||||| || ||| |  |||||||||||| ||| ||    ||||||||||||    
T  18663041 tgtccgtttgtagaactaccgaaagggagagtgtgtta--tactcctaagattcatagatgggaaaacctttaggaacact-ggccaccatacctttgga 18662945  T
Q  217 aatttaggaac-tctaatttaagtttatgtttcaattacccctaagtgagtaagaccctg 275  Q
    ||||||||||| ||| | |||| | |||||||||||||||| | |  |||||||||||||    
T  18662944 aatttaggaacgtct-acttaactatatgtttcaattacccttgacggagtaagaccctg 18662886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 255
Target Start/End: Complemental strand, 1882966 - 1882732
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||| |||||||||||||||||||| | ||||||| | ||||||||||||||| ||||| ||||| |||| | ||| |||||||| |  |||||| |||    
T  1882966 agtaagtagttagtaattaaggaaacta-tgacttcacgacttaaatcagcccaataactccattc-tctttc-ctttgtaaggtatacactgatatggc 1882870  T
Q  117 tgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttgga 216  Q
    | ||||||| ||||||||| || ||  || ||||| |||||||||| | ||| | |||||||| ||||||| ||||| ||| ||   ||||||||||| |    
T  1882869 ttcccgtttctagaactactaagagagagtgtgtgttatgtacttctaagatccataaatgagagaaccttcaggaacact-ggccatcatacctttgca 1882771  T
Q  217 aatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    | | | |||| ||||   |||||||||||||||||||||    
T  1882770 attcttggaaatctaccataagtttatgtttcaattacc 1882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 5222073 - 5222191
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggc 116  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||| ||  || ||||||||| |||||| || |||| |    
T  5222073 gtaactagttagtaattaaggaaacaagtgacttcatgtcttaaatcagccaagtaacttcattctcctcgcaccttggtaagatagatgttggtaggtc 5222172  T
Q  117 tgcccgtttgtagaactac 135  Q
    | || ||||||||||||||    
T  5222173 tacctgtttgtagaactac 5222191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 140822 - 140592
Alignment:
Q  18 gtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggct 117  Q
    ||||||||||||||||||||||||||   |||||| | |||||||||| |||||||||| ||||| |||| || ||||||||||||| | |||||||| |    
T  140822 gtaactagttagtaattaaggaaaca--cgacttcacgacttaaatcaacccagtaactccattc-tcttcca-ttggtaaggtagacgttgatagggtt 140727  T
Q  118 gcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaa 217  Q
      || |||||| |||||| || |   ||||| || |||||||||| | |||||  | |||| |||||||| | ||||||| |    ||||||||||||||    
T  140726 ctccctttgtacaactactaagatagagagtatgttatgtacttctaagattcaaatatga-ggaaccttcatgaatact-gaccatcatacctttggaa 140629  T
Q  218 atttaggaactctaatttaagtttatgtttcaattac 254  Q
    || |||||||||||   ||||||||||||||||||||    
T  140628 atctaggaactctaccctaagtttatgtttcaattac 140592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 10938322 - 10938176
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgataggg 115  Q
    ||||||||||||||||||||||||||||||||||||   | ||| |||| | || |||  ||||| |||| ||| |||||||||||||| | | ||||||    
T  10938322 agtaactagttagtaattaaggaaacaagtgacttcatgatttatatcatcacaataatatcatttttctcacaccttggtaaggtagacgattataggg 10938223  T
Q  116 ctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttc 162  Q
     | ||||||||||||||| |  ||||| |||||||| ||||||||||    
T  10938222 ttacccgtttgtagaactccagaaagggagagtgtgttatgtacttc 10938176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 9917145 - 9917052
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaaccttt 188  Q
    ||||||||||||||||||||||||||| ||||||||| |||| | ||| |||||||||||| |||||| |  |||| || ||||||||||||||    
T  9917145 gtaaggtagatgctgatagggctgcccatttgtagaaataccgagagggagagtgtgctatttacttctaaaattcatagatgagggaaccttt 9917052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 9925057 - 9924964
Alignment:
Q  95 gtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaaccttt 188  Q
    ||||||||||||||||||||||||||| ||||||||| |||| | ||| |||||||||||| |||||| |  |||| || ||||||||||||||    
T  9925057 gtaaggtagatgctgatagggctgcccatttgtagaaataccgagagggagagtgtgctatttacttctaaaattcatagatgagggaaccttt 9924964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 21884550 - 21884714
Alignment:
Q  30 taattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgtttgta 128  Q
    |||||| |||||||||||||||| | |||||| ||||||||||||||||||||| ||   || ||||||||||||| ||| |||||| | | ||||||||    
T  21884550 taattagggaaacaagtgacttcacgacttaattcagcccagtaacttcattctcctcgaactttggtaaggtagacgcttatagggttacacgtttgta 21884649  T
Q  129 gaactaccaaaaggaagagtgtgctatgtacttcaaggattc-ctaaatgagggaacctttagga 192  Q
    |||||||  | ||| |||||||  ||||| |||| | |||||  ||  |||||||||||||||||    
T  21884650 gaactactgagagggagagtgtcatatgttcttctaagattcaataggtgagggaacctttagga 21884714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 21911871 - 21911975
Alignment:
Q  30 taattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttctt-acacttggtaaggtagatgctgatagggctgcccgtttgta 128  Q
    |||||| |||||||||||||||  | |||||||||| |||||||||||||||||  || |  |||||| ||||||| |||| ||||||||||||||||||    
T  21911871 taattagggaaacaagtgactttacgacttaaatcatcccagtaacttcattctcgttgaaccttggttaggtagacgctgttagggctgcccgtttgta 21911970  T
Q  129 gaact 133  Q
     ||||    
T  21911971 aaact 21911975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 21501844 - 21501719
Alignment:
Q  146 agtgtgctatgtacttcaaggattcctaaatgagggaacctttaggaatactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgt 245  Q
    ||||||||||||||| ||| ||||| |||| | |  ||||||||| || ||| |||  ||||||||| ||||||||||||||   |||||||||||||||    
T  21501844 agtgtgctatgtactccaaagattcataaaagggaaaacctttagaaacact-ggacatcataccttaggaaatttaggaacgtcaatttaagtttatgt 21501746  T
Q  246 ttcaattacccctaagtgagtaagaccc 273  Q
    |||||||| |||| || |||||||||||    
T  21501745 ttcaatta-ccctgagggagtaagaccc 21501719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 17152724 - 17152774
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattac 254  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  17152724 tcatacctttggaaatttaggaacaccaatttaagtttatgtttcaattac 17152774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 21227941 - 21227857
Alignment:
Q  109 gatagggctgcccgtttgtagaactaccaaaaggaagagtgtgct-atgtacttcaaggattcctaaatgagggaacctttagga 192  Q
    ||||||| |||| ||||||||||||||||| ||||||||| |||| ||||||||| | ||||  || ||||||||||||||||||    
T  21227941 gatagggttgcctgtttgtagaactaccaagaggaagagtatgctgatgtacttctaagattaatagatgagggaacctttagga 21227857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 10586600 - 10586651
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  10586600 tcatacctttggaaatttaggcacaccaatttaagtttatgtttcaattacc 10586651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 18202666 - 18202710
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  18202666 cttggtaaggtagacgctgatagggcttcccgtttgtagaactac 18202710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 2348385 - 2348428
Alignment:
Q  92 ttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  2348385 ttggtaaggtagacgctgatagggttgcccgtttgtagaactac 2348428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 6006651 - 6006575
Alignment:
Q  78 cattcttcttacacttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    |||||| || || |||||||||||||| | |||||| |||||||||||||||| |||||   |||||||||||||||||    
T  6006651 cattctcctaacccttggtaaggtagacgttgatagagctgcccgtttgtagatctacc--gaggaagagtgtgctatg 6006575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 1873545 - 1873430
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttacacttggtaaggtagatgctgatagggc 116  Q
    ||||| |||||||||||||||||||| | ||||||| | ||||||||||||||| ||||| |  || |||| | |||||||||||| |  ||||||||||    
T  1873545 agtaagtagttagtaattaaggaaacta-tgacttcacgacttaaatcagcccaataactccgctc-tctttc-cttggtaaggtatacactgatagggc 1873449  T
Q  117 tgcccgtttgtagaactac 135  Q
    | || |||| |||||||||    
T  1873448 ttcctgtttctagaactac 1873430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 9863906 - 9863972
Alignment:
Q  207 tacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||| ||||||||||||| |||||||||| ||| |||||||||| | | || |||||||||||    
T  9863906 tacctttgaaaatttaggaactataatttaagtctatttttcaattactctttagggagtaagaccc 9863972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 12330001 - 12329935
Alignment:
Q  90 acttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    |||| |||||||||| ||||||||||||||||  ||||||||||| | | ||| |||||||||||||    
T  12330001 actttgtaaggtagacgctgatagggctgcccagttgtagaactatcgagagggagagtgtgctatg 12329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 8873328 - 8873267
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgag 265  Q
    |||||||||||||||| |||||||||||   || ||||||||||||||||| ||| ||||||    
T  8873328 tcatacctttggaaatctaggaactctatcctatgtttatgtttcaattactcctcagtgag 8873267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 19398463 - 19398500
Alignment:
Q  216 aaatttaggaactctaatttaagtttatgtttcaatta 253  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19398463 aaatttaggaactctaatttaagtctatgtttcaatta 19398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 5102036 - 5102119
Alignment:
Q  70 agtaacttcattcttcttacactt-ggtaaggtagatgctgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgct 153  Q
    |||||||||||||||||| ||| | |||||||||||||  ||||||| ||| |||||||||||||||  | ||| ||||||||||    
T  5102036 agtaacttcattcttctttcacctcggtaaggtagatga-gatagggttgctcgtttgtagaactactgagagggagagtgtgct 5102119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 9721639 - 9721575
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcatt 81  Q
    ||||||||||||||||||||| |||||   |||||| | ||||||||||||| | ||||||||||    
T  9721639 agtaactagttagtaattaagaaaacagacgacttcacgacttaaatcagcctaataacttcatt 9721575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 16307191 - 16307143
Alignment:
Q  225 aactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||||    
T  16307191 aactctaatttaagtttatgtttcaattactctagagtgagtaagaccc 16307143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 23588112 - 23588060
Alignment:
Q  218 atttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaaga 270  Q
    ||||||||||||||||||||||||||  |||||||||| || || ||||||||    
T  23588112 atttaggaactctaatttaagtttatacttcaattacctctgagagagtaaga 23588060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 9863751 - 9863830
Alignment:
Q  57 cttaaatcagcccagtaacttcattcttcttacac-ttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||||||| || ||||| |||||| ||  ||| || |||||||||| |||||||||||| ||| |||||||||||||    
T  9863751 cttaaatcagcacaataactccattctcctcgcaccttagtaaggtagacgctgatagggctccccatttgtagaactac 9863830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 13809275 - 13809318
Alignment:
Q  273 ctgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  13809275 ctgatagacttttagcaagtgtactaaaactatcgaagtaataa 13809318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 24783640 - 24783597
Alignment:
Q  288 caagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||| |||||||||||||||||||||| |||||| |||||||    
T  24783640 caagtgaaccaaaactatcgaagtaataaataaatttgtatcca 24783597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 28577678 - 28577733
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataattaaattcgtatc 329  Q
    ||||||| || | |||||||||||||||||||||||| |||||| |||||| ||||    
T  28577678 tgataggattttggcaagtgtaccaaaactatcgaagcaataatcaaattcatatc 28577733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 3586547 - 3586585
Alignment:
Q  92 ttggtaaggtagatgctgatagggctgcccgtttgtaga 130  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  3586547 ttggtaaggtagacgctgatagggctgctcgtttgtaga 3586585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 3735103 - 3735069
Alignment:
Q  221 taggaactctaatttaagtttatgtttcaattacc 255  Q
    ||||||||| |||||||||||||||||||||||||    
T  3735103 taggaactccaatttaagtttatgtttcaattacc 3735069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 10480368 - 10480422
Alignment:
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaaga 270  Q
    |||||||||||| |||||||||||  | |||||||||||| ||||| ||||||||    
T  10480368 aaatttaggaaccctaatttaagtccacgtttcaattacctctaagagagtaaga 10480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 26153513 - 26153471
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  26153513 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 26153471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 1728075 - 1728018
Alignment:
Q  216 aaatttaggaactctaatttaagtttatgtttcaattacccctaagtgagtaagaccc 273  Q
    |||||||||||||||||||| ||| |||| |||||||||  ||||| ||| |||||||    
T  1728075 aaatttaggaactctaattttagtatatgcttcaattacttctaagagagcaagaccc 1728018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 5107293 - 5107236
Alignment:
Q  78 cattcttctt-acacttggtaaggtagatgctgatagggctgcccgtttgtagaacta 134  Q
    |||||||||| || |||||||||||||| |||||||||| ||||| |||||| |||||    
T  5107293 cattcttcttgacccttggtaaggtagacgctgatagggttgcccttttgtaaaacta 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 9575029 - 9574992
Alignment:
Q  98 aggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  9575029 aggtagacgctgatagggcttcccgtttgtagaactac 9574992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 9890798 - 9890737
Alignment:
Q  212 ttggaaatttaggaactctaatttaagttt-atgtttcaattacccctaagtgagtaagacc 272  Q
    |||||||| || |||| |||||| |||||| |||||||||||||| ||||| ||||||||||    
T  9890798 ttggaaatgtatgaacgctaattcaagttttatgtttcaattacctctaagagagtaagacc 9890737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 10649804 - 10649743
Alignment:
Q  204 tcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctaagtgag 265  Q
    |||||||||| ||||| |||||||||||   |||||||| ||||||||||||| | ||||||    
T  10649804 tcatacctttcgaaatctaggaactctaccctaagtttaagtttcaattacccatgagtgag 10649743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 3540937 - 3540981
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||    
T  3540937 gcaagtgtaccaaaactatcaaagtagtaataaagttcgtatcca 3540981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 7397764 - 7397716
Alignment:
Q  108 tgatagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    ||||| |||||||  ||||||||||||| |||||| |||||||||||||    
T  7397764 tgataaggctgcctttttgtagaactactaaaagggagagtgtgctatg 7397716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 9500870 - 9500842
Alignment:
Q  228 tctaatttaagtttatgtttcaattaccc 256  Q
    |||||||||||||||||||||||||||||    
T  9500870 tctaatttaagtttatgtttcaattaccc 9500842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 10649987 - 10649924
Alignment:
Q  17 agtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcatt 81  Q
    |||||||||||||||||||||||||| | |||||||   |||||||||||| |||| ||| ||||    
T  10649987 agtaactagttagtaattaaggaaacta-tgacttcatgacttaaatcagctcagtgactccatt 10649924  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 10941945 - 10941989
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||||||||| |||||||| | | |||||||||||||||||    
T  10941945 cttggtaaggtagaggctgatagagtttcccgtttgtagaactac 10941989  T

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Target: scaffold0019 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 183874 - 184010
Alignment:
Q  16 cagtaactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagg 114  Q
    |||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||| |||| | || ||| ||| |||||  ||| | |||||||    
T  183874 cagtaactagttggtaattaaggaaacaagtgacttcatgacttaaatcagcccagtaactccattttcctcacaccttagtaagaaagacgttgatagg 183973  T
Q  115 gctgcccgtttgtagaactaccaaaaggaagagtgtg 151  Q
    |||||| |||| |||||||||| | ||| ||||||||    
T  183974 gctgcctgtttatagaactaccgagagggagagtgtg 184010  T

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Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 27198 - 27021
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatg------ctgat 111  Q
    ||||||||||||||||||||||||  |||||||  | | ||||||| | ||| ||||| || ||||||| || ||||||||||||||||      |||||    
T  27198 taactagttagtaattaaggaaacgggtgactttgcgatttaaatctgtccaataactccactcttctttcaccttggtaaggtagatgttgatactgat 27099  T
Q  112 agggctgcccgtttgtagaactaccaaaaggaagagtgtgctatgtacttcaaggattcctaaatgagggaaccttta 189  Q
    |||||| ||| |||||| | ||||| | ||| |||||||| ||||  |||| | |||||||| ||||| | |||||||    
T  27098 agggctacccttttgtaaagctaccgagagggagagtgtgttatgggcttctaagattcctagatgagcggaccttta 27021  T

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Target: scaffold0136 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 14894 - 15018
Alignment:
Q  28 agtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaacttcattcttcttaca-cttggtaaggtagatgctgatagggctgcccgtttg 126  Q
    |||||||||||||||| |||||||| |||| ||||||||||  ||||||||  ||||||| || || |||||||||||||||||||||| || | |||||    
T  14894 agtaattaaggaaacatgtgacttcacaacctaaatcagccatgtaacttcgctcttctttcacctcggtaaggtagatgctgatagggatgactgtttg 14993  T
Q  127 tagaactaccaaaaggaagagtgtg 151  Q
    |||||||| | | ||| ||||||||    
T  14994 tagaactatcgagagggagagtgtg 15018  T

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Target: scaffold0360 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 17529 - 17586
Alignment:
Q  19 taactagttagtaattaaggaaacaagtgacttctcaacttaaatcagcccagtaact 76  Q
    |||||| ||||||||||||||||||||||||||| | || ||||| |||||| |||||    
T  17529 taactatttagtaattaaggaaacaagtgacttcgcgacataaattagcccaataact 17586  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 40248 - 40205
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaacta 134  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||    
T  40248 cttggtaaggtagacgctgatagggttgcccatttgtagaacta 40205  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 244923 - 244970
Alignment:
Q  91 cttggtaaggtagatgctgatagggctgcccgtttgtagaactaccaa 138  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||||    
T  244923 cttggtaaggtagacactgatagggtttcccgtttgtagaactaccaa 244970  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 89334 - 89380
Alignment:
Q  110 atagggctgcccgtttgtagaactaccaaaaggaagagtgtgctatg 156  Q
    |||||||||||||||||| |||||| | | |||||||||||||||||    
T  89334 atagggctgcccgtttgtggaactatcgagaggaagagtgtgctatg 89380  T

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Target: scaffold0043; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 89433 - 89481
Alignment:
Q  207 tacctttggaaatttaggaactctaatttaagtttatgtttcaattacc 255  Q
    |||||||| |||||||| || || ||||||||||||||||| |||||||    
T  89433 tacctttgaaaatttagaaaatccaatttaagtttatgtttgaattacc 89481  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 224068 - 224026
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  224068 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 224026  T

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Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 228994 - 228952
Alignment:
Q  274 tgataggcttgtagcaagtgtaccaaaactatcgaagtaataa 316  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  228994 tgatagacttttagcaagtgtactaaaactatcgaagtaataa 228952  T

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Target: scaffold0622 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 1118 - 1159
Alignment:
Q  94 ggtaaggtagatgctgatagggctgcccgtttgtagaactac 135  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  1118 ggtaaggtggacgctgatagggatgcccgtttgtagaactac 1159  T

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Target: scaffold0352 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 2632 - 2676
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    ||||||| |||||||||||||||||||||| |||  |||||||||    
T  2632 gcaagtggaccaaaactatcgaagtaataaataagatcgtatcca 2676  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 33743 - 33787
Alignment:
Q  287 gcaagtgtaccaaaactatcgaagtaataattaaattcgtatcca 331  Q
    |||||||||||||||||||||||||| |||| || || |||||||    
T  33743 gcaagtgtaccaaaactatcgaagtagtaataaagtttgtatcca 33787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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