View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8891_low_38 (Length: 268)

Name: NF8891_low_38
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8891_low_38
NF8891_low_38
[»] chr7 (46 HSPs)
chr7 (1-262)||(28664941-28665204)
chr7 (1-162)||(21990591-21990754)
chr7 (1-128)||(42644640-42644768)
chr7 (1-128)||(46026058-46026186)
chr7 (1-162)||(17473752-17473917)
chr7 (1-162)||(17579297-17579462)
chr7 (1-162)||(45457585-45457753)
chr7 (1-128)||(41287921-41288050)
chr7 (5-162)||(5684292-5684453)
chr7 (5-162)||(5709342-5709503)
chr7 (1-162)||(17509233-17509400)
chr7 (1-162)||(17543814-17543981)
chr7 (1-148)||(27535397-27535550)
chr7 (1-125)||(48304424-48304549)
chr7 (1-158)||(1281166-1281330)
chr7 (1-128)||(11832982-11833111)
chr7 (1-128)||(42603798-42603926)
chr7 (22-125)||(45482031-45482134)
chr7 (1-163)||(9785241-9785409)
chr7 (1-162)||(10574305-10574473)
chr7 (1-125)||(22747537-22747661)
chr7 (1-129)||(24320252-24320381)
chr7 (1-128)||(36579341-36579469)
chr7 (1-114)||(21603441-21603554)
chr7 (1-162)||(21954847-21955015)
chr7 (1-128)||(3266346-3266480)
chr7 (2-162)||(6667320-6667486)
chr7 (1-162)||(15674641-15674819)
chr7 (1-110)||(39533004-39533114)
chr7 (1-128)||(2622558-2622684)
chr7 (1-128)||(4621396-4621524)
chr7 (7-128)||(32740717-32740839)
chr7 (1-72)||(10094461-10094533)
chr7 (59-128)||(24988443-24988511)
chr7 (55-162)||(40761522-40761626)
chr7 (1-129)||(14657850-14657973)
chr7 (1-72)||(43847090-43847162)
chr7 (29-128)||(37376095-37376193)
chr7 (30-110)||(39707272-39707351)
chr7 (118-162)||(21603378-21603422)
chr7 (1-162)||(9720002-9720165)
chr7 (1-63)||(32643041-32643104)
chr7 (1-72)||(29352266-29352338)
chr7 (168-197)||(39786515-39786544)
chr7 (58-110)||(36719628-36719680)
chr7 (5-44)||(40761659-40761699)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-161)||(2831-2994)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-128)||(6101-6229)
[»] chr1 (38 HSPs)
chr1 (1-128)||(424320-424448)
chr1 (1-154)||(32784046-32784200)
chr1 (1-128)||(27534663-27534791)
chr1 (1-129)||(12871584-12871713)
chr1 (1-128)||(3232752-3232880)
chr1 (1-128)||(28678159-28678287)
chr1 (1-128)||(33487059-33487187)
chr1 (1-128)||(42490857-42490985)
chr1 (12-128)||(7995600-7995718)
chr1 (1-125)||(14265251-14265376)
chr1 (37-158)||(15791554-15791675)
chr1 (1-128)||(4882388-4882516)
chr1 (1-128)||(20411537-20411665)
chr1 (1-128)||(45750442-45750570)
chr1 (1-162)||(29205209-29205377)
chr1 (1-128)||(45193655-45193783)
chr1 (1-128)||(17347563-17347689)
chr1 (1-128)||(18343578-18343706)
chr1 (5-148)||(42276301-42276444)
chr1 (1-128)||(13488565-13488692)
chr1 (1-160)||(32878634-32878797)
chr1 (1-97)||(37822374-37822471)
chr1 (1-82)||(44517157-44517239)
chr1 (1-69)||(51418037-51418105)
chr1 (1-72)||(10627020-10627092)
chr1 (1-63)||(29726625-29726688)
chr1 (30-156)||(33125865-33125996)
chr1 (92-162)||(5832167-5832243)
chr1 (1-128)||(4871055-4871183)
chr1 (51-123)||(33939082-33939154)
chr1 (1-132)||(9298443-9298580)
chr1 (1-44)||(15391281-15391325)
chr1 (76-128)||(47551109-47551161)
chr1 (99-162)||(37825450-37825515)
chr1 (121-162)||(23320392-23320433)
chr1 (99-128)||(29726700-29726729)
chr1 (1-40)||(15791304-15791344)
chr1 (1-63)||(28399350-28399414)
[»] chr5 (31 HSPs)
chr5 (1-161)||(17096268-17096432)
chr5 (1-162)||(17699480-17699645)
chr5 (1-128)||(17331292-17331420)
chr5 (1-162)||(29097716-29097881)
chr5 (1-128)||(28040593-28040721)
chr5 (1-128)||(33164497-33164625)
chr5 (1-162)||(27240994-27241156)
chr5 (1-162)||(39531433-39531595)
chr5 (1-128)||(6281008-6281136)
chr5 (1-122)||(32347743-32347866)
chr5 (1-162)||(6635173-6635342)
chr5 (1-109)||(42609127-42609236)
chr5 (1-125)||(43493839-43493964)
chr5 (2-128)||(3740322-3740448)
chr5 (53-162)||(7771888-7771997)
chr5 (1-162)||(178135-178299)
chr5 (5-107)||(34431045-34431148)
chr5 (1-128)||(6681905-6682031)
chr5 (1-82)||(39179857-39179939)
chr5 (1-128)||(26295087-26295215)
chr5 (22-128)||(981076-981182)
chr5 (1-129)||(12439663-12439791)
chr5 (1-128)||(20483150-20483278)
chr5 (1-129)||(17687176-17687297)
chr5 (1-62)||(12891706-12891768)
chr5 (1-122)||(23882145-23882267)
chr5 (1-129)||(42396541-42396671)
chr5 (1-72)||(3079334-3079406)
chr5 (102-162)||(3079419-3079478)
chr5 (1-68)||(18653806-18653874)
chr5 (1-110)||(25961907-25962019)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-161)||(74095-74256)
[»] chr3 (38 HSPs)
chr3 (1-128)||(36691836-36691964)
chr3 (1-156)||(36624731-36624887)
chr3 (1-162)||(14585386-14585554)
chr3 (1-128)||(48652477-48652605)
chr3 (1-162)||(53155467-53155629)
chr3 (1-162)||(32080791-32080960)
chr3 (1-128)||(1074931-1075058)
chr3 (1-128)||(13702009-13702137)
chr3 (1-128)||(31270290-31270418)
chr3 (1-128)||(31462783-31462911)
chr3 (1-158)||(35174635-35174796)
chr3 (1-161)||(39610132-39610304)
chr3 (1-162)||(40013309-40013476)
chr3 (1-128)||(48400863-48400991)
chr3 (1-119)||(11819056-11819175)
chr3 (1-162)||(34960895-34961060)
chr3 (5-153)||(41868335-41868488)
chr3 (1-128)||(3456907-3457035)
chr3 (1-128)||(55090620-55090748)
chr3 (1-125)||(54239055-54239180)
chr3 (6-125)||(30156324-30156443)
chr3 (1-123)||(38527232-38527355)
chr3 (15-147)||(27189445-27189580)
chr3 (1-129)||(49628124-49628254)
chr3 (1-96)||(22484961-22485057)
chr3 (1-162)||(40883905-40884062)
chr3 (1-110)||(19645203-19645313)
chr3 (31-153)||(53402565-53402691)
chr3 (1-128)||(4206548-4206676)
chr3 (1-128)||(24483715-24483843)
chr3 (1-119)||(19861316-19861433)
chr3 (92-128)||(33637386-33637422)
chr3 (1-44)||(34103754-34103798)
chr3 (1-63)||(4817867-4817930)
chr3 (1-72)||(33637423-33637495)
chr3 (1-62)||(2147756-2147819)
chr3 (1-114)||(106072-106187)
chr3 (1-44)||(3312491-3312535)
[»] chr2 (41 HSPs)
chr2 (1-162)||(12704614-12704779)
chr2 (1-162)||(22597060-22597227)
chr2 (1-128)||(43474157-43474285)
chr2 (1-152)||(27095636-27095797)
chr2 (1-128)||(33012041-33012169)
chr2 (1-162)||(20561161-20561324)
chr2 (1-129)||(25067815-25067944)
chr2 (6-161)||(18089426-18089582)
chr2 (1-128)||(38535334-38535462)
chr2 (1-128)||(44942249-44942377)
chr2 (7-128)||(11937893-11938016)
chr2 (1-145)||(4604336-4604484)
chr2 (1-162)||(9978698-9978863)
chr2 (1-128)||(15919838-15919965)
chr2 (1-128)||(5754252-5754380)
chr2 (1-128)||(7072977-7073105)
chr2 (1-128)||(9690002-9690130)
chr2 (1-119)||(17268154-17268272)
chr2 (1-162)||(31908845-31909010)
chr2 (1-128)||(28261917-28262049)
chr2 (1-128)||(13879035-13879171)
chr2 (1-128)||(14019160-14019296)
chr2 (1-162)||(36867935-36868100)
chr2 (1-154)||(34416790-34416944)
chr2 (1-125)||(13740689-13740813)
chr2 (1-128)||(32015184-32015316)
chr2 (1-128)||(4739295-4739421)
chr2 (1-107)||(35333490-35333597)
chr2 (1-84)||(4426687-4426771)
chr2 (11-162)||(34963105-34963262)
chr2 (26-162)||(38384497-38384645)
chr2 (1-128)||(28231126-28231254)
chr2 (76-162)||(12891194-12891289)
chr2 (1-142)||(34470912-34471058)
chr2 (1-72)||(32314462-32314534)
chr2 (1-53)||(10287035-10287088)
chr2 (1-104)||(4732059-4732162)
chr2 (5-156)||(17767584-17767742)
chr2 (92-162)||(7640460-7640530)
chr2 (59-162)||(41797548-41797648)
chr2 (87-161)||(34416992-34417066)
[»] chr4 (53 HSPs)
chr4 (1-162)||(478041-478202)
chr4 (1-129)||(29268806-29268935)
chr4 (1-128)||(24825613-24825741)
chr4 (1-162)||(22757021-22757186)
chr4 (1-126)||(44757071-44757197)
chr4 (1-128)||(24568742-24568870)
chr4 (1-162)||(39837521-39837687)
chr4 (2-162)||(394304-394462)
chr4 (1-143)||(7060273-7060416)
chr4 (5-162)||(24611832-24611990)
chr4 (1-161)||(31521910-31522074)
chr4 (1-162)||(43244410-43244575)
chr4 (1-162)||(26742492-26742660)
chr4 (1-128)||(6911644-6911772)
chr4 (1-128)||(30202002-30202130)
chr4 (1-158)||(7083845-7084005)
chr4 (1-128)||(27394794-27394922)
chr4 (1-112)||(19745369-19745481)
chr4 (1-112)||(19794325-19794437)
chr4 (1-127)||(626578-626703)
chr4 (1-107)||(13965545-13965652)
chr4 (1-134)||(7861235-7861368)
chr4 (1-114)||(24100117-24100233)
chr4 (1-162)||(8712454-8712622)
chr4 (1-162)||(20399932-20400100)
chr4 (1-162)||(25658091-25658259)
chr4 (1-112)||(51152105-51152217)
chr4 (1-128)||(11210342-11210470)
chr4 (1-128)||(26674336-26674464)
chr4 (1-161)||(29922762-29922929)
chr4 (1-90)||(6881958-6882048)
chr4 (1-128)||(5814311-5814439)
chr4 (1-102)||(38944177-38944278)
chr4 (1-105)||(20887785-20887889)
chr4 (22-128)||(7084170-7084276)
chr4 (1-84)||(50801225-50801309)
chr4 (1-95)||(36124378-36124471)
chr4 (1-114)||(39523396-39523501)
chr4 (22-128)||(42197517-42197622)
chr4 (1-114)||(3159021-3159135)
chr4 (1-110)||(22049433-22049543)
chr4 (1-109)||(12717146-12717255)
chr4 (1-104)||(45351099-45351205)
chr4 (1-104)||(45360578-45360684)
chr4 (1-60)||(8517485-8517545)
chr4 (46-162)||(28837005-28837121)
chr4 (1-72)||(43493316-43493388)
chr4 (1-83)||(2447809-2447892)
chr4 (118-162)||(20887918-20887962)
chr4 (1-162)||(13586269-13586432)
chr4 (92-162)||(46717007-46717077)
chr4 (121-162)||(43493417-43493458)
chr4 (71-150)||(42971990-42972069)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-128)||(35046-35176)
[»] chr8 (38 HSPs)
chr8 (1-158)||(1810257-1810414)
chr8 (1-122)||(30026917-30027039)
chr8 (1-128)||(14600735-14600863)
chr8 (1-129)||(37612616-37612745)
chr8 (1-162)||(9501516-9501682)
chr8 (1-128)||(39067726-39067854)
chr8 (1-128)||(41361696-41361824)
chr8 (1-162)||(24791205-24791370)
chr8 (1-128)||(10147910-10148039)
chr8 (2-128)||(23971132-23971259)
chr8 (6-162)||(12329559-12329713)
chr8 (5-128)||(24699794-24699920)
chr8 (1-128)||(2025246-2025374)
chr8 (1-128)||(10338859-10338986)
chr8 (1-128)||(11161846-11161974)
chr8 (1-128)||(31308106-31308240)
chr8 (1-128)||(31407785-31407913)
chr8 (1-128)||(31202422-31202550)
chr8 (50-128)||(7583851-7583929)
chr8 (1-122)||(13570763-13570885)
chr8 (1-128)||(2234507-2234635)
chr8 (22-129)||(10334137-10334244)
chr8 (1-128)||(1039930-1040057)
chr8 (2-107)||(3204794-3204899)
chr8 (1-74)||(37128523-37128597)
chr8 (1-108)||(30039374-30039476)
chr8 (30-145)||(7281587-7281707)
chr8 (1-53)||(7579892-7579945)
chr8 (1-56)||(22787528-22787584)
chr8 (1-63)||(15288835-15288898)
chr8 (1-63)||(15469204-15469267)
chr8 (102-161)||(41996508-41996567)
chr8 (92-158)||(8054912-8054978)
chr8 (1-69)||(4757188-4757257)
chr8 (46-160)||(13576259-13576378)
chr8 (95-128)||(30027046-30027079)
chr8 (1-108)||(2968513-2968624)
chr8 (118-162)||(39067874-39067918)
[»] chr6 (22 HSPs)
chr6 (1-162)||(6419887-6420055)
chr6 (1-162)||(8693686-8693854)
chr6 (1-128)||(12481399-12481527)
chr6 (1-128)||(23654214-23654342)
chr6 (5-158)||(15590112-15590269)
chr6 (1-128)||(21507837-21507965)
chr6 (1-128)||(2304839-2304967)
chr6 (1-114)||(14783200-14783314)
chr6 (39-128)||(29927447-29927536)
chr6 (1-128)||(19402837-19402965)
chr6 (1-116)||(31937449-31937563)
chr6 (1-128)||(35219933-35220060)
chr6 (1-128)||(4921910-4922039)
chr6 (1-128)||(6296278-6296409)
chr6 (1-128)||(6303088-6303219)
chr6 (50-162)||(4084944-4085060)
chr6 (1-85)||(4393777-4393862)
chr6 (4-72)||(23638150-23638219)
chr6 (92-162)||(19759728-19759798)
chr6 (3-55)||(31937563-31937615)
chr6 (118-158)||(1302659-1302699)
chr6 (1-40)||(29927123-29927163)
[»] scaffold1379 (2 HSPs)
scaffold1379 (1-125)||(1115-1240)
scaffold1379 (1-63)||(4-67)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-153)||(2446-2603)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-127)||(404287-404414)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-128)||(4096-4223)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-90)||(7153-7243)
[»] scaffold1350 (1 HSPs)
scaffold1350 (1-128)||(1539-1666)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-122)||(13274-13400)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 6e-83; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 28664941 - 28665204
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||| |||||| ||||||||    
T  28664941 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgattttagggtcaaaattgacc 28665040  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaagggttgataattacactacttttaataaaaaagttacg 199  Q
    ||||||||||| |||||||||||||||||| ||||||||   ||||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||     
T  28665041 ctaaatcacccatctgacaagaagaagaaaggggtgacggtcagggtttgagaatgagagaagagttaataattacactacttttaataaaaaagttact 28665140  T
Q  200 tgaaaaattcatacgcagcaatccttaaatgaaatgtttg-tgcctatttgggtcccacaatgc 262  Q
    ||||||||| ||| || |||||| ||||||||| | |||| ||||||||| |||||||||||||    
T  28665141 tgaaaaatttatatgcggcaatctttaaatgaactatttgttgcctattttggtcccacaatgc 28665204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21990754 - 21990591
Alignment:
Q  1 aaaacaaacgaaagaaaacagaa-atatgtgaaatcacttattcagttaggatagaaggaaaaat-aactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||  || ||||| | |||||||||  |||| |||||||    
T  21990754 aaaacaaacgaaagaaaacagaatatatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggaggggtgatttttcagtcaaaattgac 21990655  T
Q  99 cctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||||||| |||||  ||||| |||||||| ||||||||| |||||||||||||    
T  21990654 cctaaatcacccctctgaaaagaaagagaaaggggtgacggctagggtttgagaaggagagaag 21990591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 42644768 - 42644640
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| || ||  |||||||||||||| |||| |||||| |    
T  42644768 aaaacaaacgaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtcaaaattgatc 42644669  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  42644668 ctaaatcacccctctgaaaagaagaagaa 42644640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 46026058 - 46026186
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| ||||| |||| ||||||||| |||||||||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  46026058 aaaacaaacgaaagaaaacaaaaaatatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgacc 46026157  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  46026158 ctaaatcacccctctgaaaagaagaagaa 46026186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17473752 - 17473917
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||| || ||||| | ||||||||| ||||| ||||||||    
T  17473752 aaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgacc 17473851  T
Q  100 ctaaatcacccctctgacaag---aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||| |||| |||   ||||||||| ||||||| |||||||||| |||||||||||||    
T  17473852 ctaaatcaccccactgaaaagaataagaagaaaagggtgacaactagggtttgagaaggagagaag 17473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17579462 - 17579297
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||| || ||||| | ||||||||| ||||| ||||||||    
T  17579462 aaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgacc 17579363  T
Q  100 ctaaatcacccctctgacaag---aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||| |||| |||   ||||||||| ||||||| |||||||||| |||||||||||||    
T  17579362 ctaaatcaccccactgaaaagaataagaagaaaagggtgacaactagggtttgagaaggagagaag 17579297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 45457585 - 45457753
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||| || ||||| |||||||||||| |||| ||||||||    
T  45457585 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggagtgatttttgcgtcaaaattgacc 45457684  T
Q  100 ctaaatcacccctctgacaag------aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||| | |||      ||||||||| ||||||| |||||||||| |||||||| ||||    
T  45457685 ctaaatcacccctctaaaaagaagaaaaagaagaaaggggtgacaactagggtttgagaaggagggaag 45457753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41288050 - 41287921
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaa-taactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||||| | ||||||||| |||||| |||||||| |||||||    
T  41288050 aaaacaaacgaaaggaaacagaaaatatgtgaaatcacctattcaattaggatagaaggaaaaaatcactcggatgggtgattattgggtcaaaattgac 41287951  T
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||| | |||||||||||    
T  41287950 cctaaatcacccctctaagaagaagaagaa 41287921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 5684453 - 5684292
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| || |||||   |||||||||| |||| ||||||||||||    
T  5684453 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaa 5684354  T
Q  104 atcacccctctgacaag---aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||| | | |||   ||||||||| || |||| |||||||||||| |||||||||||    
T  5684353 atcacccctttaaaaagaataagaagaaaaggatgacaactagggtttaaaaaggagagaag 5684292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 5709503 - 5709342
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| || |||||   |||||||||| |||| ||||||||||||    
T  5709503 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaa 5709404  T
Q  104 atcacccctctgacaag---aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||| | | |||   ||||||||| || |||| |||||||||||| |||||||||||    
T  5709403 atcacccctttaaaaagaataagaagaaaaggatgacaactagggtttaaaaaggagagaag 5709342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17509233 - 17509400
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||  |||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||| | ||||||||| ||||| ||||||||    
T  17509233 aaaacaaattaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgacc 17509331  T
Q  100 ctaaatcacccctctg------acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||| |||||||      | |||||||||||| ||||||| |||||||||| |||||||||||||    
T  17509332 ctaaatcatccctctgaaaagaagaagaagaagaaaagggtgacaactagggtttgagaaggagagaag 17509400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17543981 - 17543814
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||  |||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||| | ||||||||| ||||| ||||||||    
T  17543981 aaaacaaattaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgacc 17543883  T
Q  100 ctaaatcacccctctg------acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||| |||||||      | |||||||||||| ||||||| |||||||||| |||||||||||||    
T  17543882 ctaaatcatccctctgaaaagaagaagaagaagaaaagggtgacaactagggtttgagaaggagagaag 17543814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 27535550 - 27535397
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa---tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    |||||||| |||| ||||||||||   ||||||||||||||||| || |||| ||||||||||||| || ||||||| ||||||||||| | | ||||||    
T  27535550 aaaacaaatgaaataaaacagaaaatatatgtgaaatcacttatacaattagaatagaaggaaaaacaattcggatgggtgatttttggataaaaattga 27535451  T
Q  98 ccctaaatcacccctctg---acaagaagaagaaatgggtgacgactagggttt 148  Q
    ||||||||||||||||||   | |||||||||||| ||||||||||||||||||    
T  27535450 ccctaaatcacccctctgtaaaaaagaagaagaaaagggtgacgactagggttt 27535397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 48304424 - 48304549
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| | | |||||||||||||||| ||||||||| |||||||  || ||||||| ||||||||||||||| ||||||||    
T  48304424 aaaacaaactaaagaaaacagaaaatctatgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattgacc 48304523  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
    ||||||||||||||||| ||||||||    
T  48304524 ctaaatcacccctctgaaaagaagaa 48304549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 1281166 - 1281330
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||| ||| || |||||| || ||||||| ||||||||| ||||| ||| ||||    
T  1281166 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatataatgaaaaacaattcggatgggtgattttttggtcaaaatggacc 1281265  T
Q  100 ctaaatcacccctctgacaaga------agaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    ||||||||||| ||||| ||||      |||||||| ||||||| |||||||||| |||||||||    
T  1281266 ctaaatcacccatctgaaaagaataagtagaagaaaagggtgacaactagggtttgagaaggaga 1281330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11833111 - 11832982
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgag-tgatttttgggtcagaattgac 98  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||| || ||||| | | |||||||||||||| |||||||    
T  11833111 aaaacaaacgaaagaatacagaaaatatgtgaaatcacttattcaattaggaaagaaggaaaaacaattcggagggggtgatttttgggtcaaaattgac 11833012  T
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    | ||||||| |||||||| |||||||||||    
T  11833011 cataaatcatccctctgaaaagaagaagaa 11832982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42603798 - 42603926
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| || ||||| | |||||||||| |||| ||||||||    
T  42603798 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttttgagtcaaaattgacc 42603897  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||||| |||| | |||||||||||    
T  42603898 ataaatcaccgctctaaaaagaagaagaa 42603926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 45482134 - 45482031
Alignment:
Q  22 aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaaga 121  Q
    ||||||||||||||||||||| | |||||||||||||||||| | |||||| | |||||||| |||||| ||||||||||||||||| ||||||||||||    
T  45482134 aaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgattttggggtcaaaattgaccctaaatcactcctctgacaaga 45482035  T
Q  122 agaa 125  Q
    ||||    
T  45482034 agaa 45482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9785409 - 9785241
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| |||| |||||||||| ||| |||||||||||||||||||| ||| |||||||||||||| || ||| | | ||||||||||||||| ||||||||    
T  9785409 aaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgacc 9785310  T
Q  100 ctaaatcacccctctgacaaga------agaagaaatgggtgacgactagggtttaagaaggagagaagg 163  Q
    ||||||||||||| ||| ||||      ||||||||  ||||||| ||||||||| ||||||||||||||    
T  9785309 ctaaatcacccct-tgaaaagaagaaacagaagaaagaggtgacggctagggtttgagaaggagagaagg 9785241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 10574473 - 10574305
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||| |||||  ||||||| |||||||| ||||||||| || ||||| | |||||||||| |||| ||||||||    
T  10574473 aaaacaaacgaaagaaaacagaaaatatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgagtcaaaattgacc 10574374  T
Q  100 ctaaatcacccctctgacaag------aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||| ||| | |||      ||||||||| ||||||||  |||||||| |||||||||||||    
T  10574373 ctaaatcacccatctaaaaagaagaaaaagaagaaaggggtgacggatagggtttgagaaggagagaag 10574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 22747537 - 22747661
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||  |||| ||| | ||||||||||||||| ||||||||    
T  22747537 aaaataaatgaaagaaaacataaaatatgtcaaatcacttattcaattaggatagaaggaaaac-aacttggaggggtgatttttgggtcaaaattgacc 22747635  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
    ||||||||||||| ||||||||||||    
T  22747636 ctaaatcacccctttgacaagaagaa 22747661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24320252 - 24320381
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||| ||| |||||||||||||||||| | ||| |||||||||||||| |||||| |||||||||||||| |||| ||||||||    
T  24320252 aaaacaaacaaaagaaaacaaaaaatatgtgaaatcacttattaaattaagatagaaggaaaaacaactcgaatgagtgatttttgagtcaaaattgacc 24320351  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
     ||||| |||  ||| ||||||||||||||    
T  24320352 ttaaataaccattctaacaagaagaagaaa 24320381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36579341 - 36579469
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||| ||| |||||| |||||||||||||  ||||||||||||||||| || ||||| | |||||||| |||||| ||||||||    
T  36579341 aaaacaaacaaaagaaaacaaaaaatatgtggaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgattttcgggtcaaaattgacc 36579440  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||| |||||| | |||||||||||    
T  36579441 ctaaatcatccctcttaaaagaagaagaa 36579469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21603554 - 21603441
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| || || || | ||| ||||| ||||| ||||||||    
T  21603554 aaaacaaaggaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgcttttt-ggtcaaaattgacc 21603456  T
Q  100 ctaaatcacccctct 114  Q
    |||||||||||||||    
T  21603455 ctaaatcacccctct 21603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21954847 - 21955015
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||| |||||||||||| || |||||||| |||||| ||||| | ||||||||||| |||||| ||||||||||||||| |||||||| | |||||||    
T  21954847 aaaacagacgaaagaaaactgacaatatgtggaaatcatttatttaattaggatagaatgaaaaacaactcggatgagtga-ttttgggttaaaattgac 21954945  T
Q  99 cctaaatcacccctct------gacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||| |||      ||||||||||||||| |   |||||||||||||| |||||||||||||    
T  21954946 cctaaatcacccttctttggtggacaagaagaagaaaggaccgacgactagggtttgagaaggagagaag 21955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3266480 - 3266346
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg------aaaaataactcggatgagtgatttttgggtcagaa 93  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||      ||||| |||||||| |  ||||| |||| ||| ||    
T  3266480 aaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaacaactcggagggatgattattggatcaaaa 3266381  T
Q  94 ttgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||| ||||||||||||||||||||||||||||    
T  3266380 ttgaccataaatcacccctctgacaagaagaagaa 3266346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 6667486 - 6667320
Alignment:
Q  2 aaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcag-ttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||  |||| ||||||| ||||| || ||||  | ||||||||||||||| ||||||||    
T  6667486 aaacaaac-aaacaaaacagaaaatatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgacc 6667388  T
Q  100 ctaaatcacccctctgacaagaagaaga-----aatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||| ||||| | ||||||||||     || |||||||| ||||||||| |||||||||||||    
T  6667387 ctaaatcactcctctaaaaagaagaagaagaagaaagggtgacggctagggtttgagaaggagagaag 6667320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15674641 - 15674819
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgg------atgagtgat-------ttttgg 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| || ||||      || ||| ||       |||| |    
T  15674641 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataggaggaaaaacaattcgggtcaaaattagtaatgatgtaattttag 15674740  T
Q  87 gtcagaattgaccctaaatcacccctctg---acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||| ||||||||||||||||||||||||   | |||||||||||| |||||||||||||||||| |||| ||||||||    
T  15674741 gtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaagggtgacgactagggtttgagaacgagagaag 15674819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39533004 - 39533114
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgag-tgatttttgggtcagaattgac 98  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||| || || || ||| |||||||||||||| |||||||    
T  39533004 aaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcaga-gagatgatttttgggtcaaaattgac 39533102  T
Q  99 cctaaatcaccc 110  Q
    ||||||||||||    
T  39533103 cctaaatcaccc 39533114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2622684 - 2622558
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||| ||||||||||||| ||| |||||| ||||||||| ||| |||||||||||||| || ||||||| ||||||||||||||| |||||| |    
T  2622684 aaaacaaacgcaagaaaacagaaaatatctgaaattacttattcaattaagatagaaggaaaaacaattcggatgcgtgatttttgggtcaaaattga-c 2622586  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||| ||||||||  ||||||||||    
T  2622585 ttaaatca-ccctctgaggagaagaagaa 2622558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4621396 - 4621524
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| ||||  || ||||||| |||||||| ||| | |||||||||||| |||||| | ||||||||||| ||||| |||||||     
T  4621396 aaaacaaacgaaagaaaactgaaaacatatgaaatcgcttattcaattatggtagaaggaaaaacaactcgaaagagtgatttttaggtcaaaattgact 4621495  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||| ||| || |||||||||||||||    
T  4621496 ctaaataacctctttgacaagaagaagaa 4621524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 32740839 - 32740717
Alignment:
Q  7 aacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtga-tttttgggtcagaattgaccctaaa 104  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| || |||   | |||| ||||| ||||| ||||||| |||||    
T  32740839 aacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgagggggtgatttttttggtcaaaattgactctaaa 32740740  T
Q  105 tcacccctctgacaagaagaagaa 128  Q
    ||| |||||||| |||||||||||    
T  32740739 tca-ccctctgaaaagaagaagaa 32740717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10094533 - 10094461
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || |||||    
T  10094533 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgga 10094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 24988443 - 24988511
Alignment:
Q  59 aaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    ||||| |||||||| | |||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  24988443 aaaaacaactcggaggggtgatttt-gggtcaaaattgaccctgaatcacccctctgacaagaagaagaa 24988511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 40761626 - 40761522
Alignment:
Q  55 aaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaag 154  Q
    ||||||||| |  ||||| | ||||||||||||||| |||||||||||||||| |||||||   | ||||||||| ||| |||| |||||||||  ||||    
T  40761626 aaggaaaaacagttcggaggggtgatttttgggtcaaaattgaccctaaatcatccctctg---aaaagaagaaaggggcgacggctagggtttgggaag 40761530  T
Q  155 gagagaag 162  Q
    ||||||||    
T  40761529 gagagaag 40761522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 14657850 - 14657973
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa---tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    ||||||||| ||||||||| ||||   |||||||||| ||||||||| ||| |||||||||||||| | |||||||  |||||||| ||        |||    
T  14657850 aaaacaaacaaaagaaaactgaaaatatatgtgaaataacttattcaattaagatagaaggaaaaacagctcggattggtgattttggg--------tga 14657941  T
Q  98 ccctaaatcacccctctgacaagaagaagaaa 129  Q
     |||||||||||||||| ||||||||||||||    
T  14657942 tcctaaatcacccctctaacaagaagaagaaa 14657973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43847162 - 43847090
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||  |||||||| || |||||    
T  43847162 aaaacaaacgaaggaaaacagaaaatatgtgaaatcacttattcaattaggataagaggaaaaacaattcgga 43847090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 37376095 - 37376193
Alignment:
Q  29 tgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    ||||| |||||||||| |||| |||||||||||||||| ||| | | ||||| |||| |||| |||| | |||||||||||| ||||| |||||||||||    
T  37376095 tgaaaccacttattcaattag-atagaaggaaaaataattcgaaggggtgatctttgagtcaaaatttatcctaaatcacccttctgaaaagaagaagaa 37376193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 39707351 - 39707272
Alignment:
Q  30 gaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgat--ttttgggtcagaattgaccctaaatcaccc 110  Q
    ||||| ||||||| | ||||||||||| |||||| ||||||||   |||||  |||||||||| |||||||||||||||||||    
T  39707351 gaaataacttatttaattaggatagaaagaaaaacaactcgga---gtgatgattttgggtcaaaattgaccctaaatcaccc 39707272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 21603422 - 21603378
Alignment:
Q  118 aagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||    
T  21603422 aagaagaagaaaggggtgacggctagggtttgagaaggagagaag 21603378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9720002 - 9720165
Alignment:
Q  1 aaaacaaacgaaagaaaa-cagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||| ||| |||| ||| ||||| || | |||      ||||||| |||| |||||||    
T  9720002 aaaacaaacgaaaaaaaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttgga------atttttgagtcaaaattgac 9720095  T
Q  99 cctaaatcacccctctg------acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    | |||||| |||  |||      | |||||||||||| || ||||||||||| ||| |||||||||||||    
T  9720096 cataaatcgccctgctgaaaagaagaagaagaagaaaaggatgacgactaggatttgagaaggagagaag 9720165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32643104 - 32643041
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaa 63  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||| ||| | |||||| |||||    
T  32643104 aaaacaaacaaaagaaaacagaaaatatgtgaaatcacttgttcaattaaggtagaagaaaaaa 32643041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29352338 - 29352266
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgt-gaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    ||||||||||||||||||| || ||||||| ||||||||||||| | |||||||| ||  ||||||||||||||    
T  29352338 aaaacaaacgaaagaaaactgagaatatgtggaaatcacttatttaattaggatataa-taaaaataactcgga 29352266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 39786515 - 39786544
Alignment:
Q  168 ataattacactacttttaataaaaaagtta 197  Q
    ||||||||||||||||||||||||||||||    
T  39786515 ataattacactacttttaataaaaaagtta 39786544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 36719628 - 36719680
Alignment:
Q  58 gaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcaccc 110  Q
    |||||| || ||||| | ||||||||||| ||| |||||||||||||||||||    
T  36719628 gaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcaccc 36719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 40761699 - 40761659
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattca 44  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  40761699 caaacgaaagaaaacataaaatatgtgaaatcacttattca 40761659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2994 - 2831
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaata--actcggatgagtgatttttgggtcagaattga 97  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| |  ||||||| | |||||| |||||||| ||||||    
T  2994 aaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgattattgggtcaaaattga 2895  T
Q  98 ccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||    
T  2894 ccctaaatcacccctctaacaagaagaagaaaggggtgacgactagggtttgagaagaagagaa 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6229 - 6101
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| ||||||||    
T  6229 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgacc 6130  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||||||||    
T  6129 ctaaatcacccctctgacaagaagaagaa 6101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 424320 - 424448
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| ||||||||    
T  424320 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgacc 424419  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||||||||    
T  424420 ctaaatcacccctctgacaagaagaagaa 424448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32784200 - 32784046
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| | |||||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  32784200 aaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgacc 32784101  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaag 154  Q
    ||||||||||||| ||| |||||||||||| |||||||  || |||||| |||||    
T  32784100 ctaaatcacccctttgaaaagaagaagaaaggggtgacagctggggtttgagaag 32784046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27534791 - 27534663
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || ||||| |  |||||||||||||| ||||||||    
T  27534791 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagggatgatttttgggtcaaaattgacc 27534692  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||| ||||||||||||||||||||    
T  27534691 ctaaatcatccctctgacaagaagaagaa 27534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12871713 - 12871584
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| |||| |||||||||||||||||||  |||||||| || |||||| |||||||| | ||||||||||||||| ||||||||    
T  12871713 aaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcgattaggatataatgaaaaacaactcggaggggtgatttttgggtcaaaattgacc 12871614  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
    ||||||||||||||||||| |||| |||||    
T  12871613 ctaaatcacccctctgacacgaaggagaaa 12871584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3232880 - 3232752
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| || ||||| | ||||||||| | ||| ||||||||    
T  3232880 aaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggaggggtgattttttgatcaaaattgacc 3232781  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||| ||||| |||||||||||    
T  3232780 ctaaatcacccatctgaaaagaagaagaa 3232752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28678159 - 28678287
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| | ||| |||||||||||||||||||| ||| ||||||| |||||| || ||||| ||||||||||||||||| ||||||||    
T  28678159 aaaacaaacgaaagaaaatataaaatatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgacc 28678258  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| | |||||||||||    
T  28678259 ctaaatcacccctctaaaaagaagaagaa 28678287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33487059 - 33487187
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||| || ||| ||| ||||||||| |||||| |||||||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  33487059 aaaacaaacgaaagaaagcataaaatatatgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgacc 33487158  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  33487159 ctaaatcacccctctgaaaagaagaagaa 33487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 42490985 - 42490857
Alignment:
Q  1 aaaacaaacgaaagaaaacagaa-atatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| |||||| || ||||| | ||||||||| ||||| | ||||||    
T  42490985 aaaacaaacgaaagaaaactgaagatatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggaggggtgatttttaggtcaaacttgacc 42490886  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||| ||||||||||||||||||    
T  42490885 ctaaatcacctctctgacaagaagaagaa 42490857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 7995600 - 7995718
Alignment:
Q  12 aagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcaccc 110  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||   ||||||||||||||| |||||||||||||||||||    
T  7995600 aagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcaccc 7995699  T
Q  111 ctctg-acaagaagaagaa 128  Q
    ||||| | |||||||||||    
T  7995700 ctctgaaaaagaagaagaa 7995718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14265376 - 14265251
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||| ||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||| | |||||| | |||||||||  |||| ||||||||    
T  14265376 aaaacatacgtaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgatttttttgtcaaaattgacc 14265277  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
    ||||||||||| ||||||||||||||    
T  14265276 ctaaatcacccatctgacaagaagaa 14265251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 15791554 - 15791675
Alignment:
Q  37 cttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaaatgggtga 136  Q
    |||||||| ||| |||| ||||||||| ||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||||||||||  | |||    
T  15791554 cttattcaattaagatataaggaaaaacaactcggatgagtgatttttgtgtcaaaattgatcctaaatcagccctccgacaagaagaagaaagagatga 15791653  T
Q  137 cgactagggtttaagaaggaga 158  Q
    |||||||||||| |||||||||    
T  15791654 cgactagggtttgagaaggaga 15791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4882388 - 4882516
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||| || ||||| | ||||||||||||||  |||||||     
T  4882388 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataatgaaaaacaaatcggaggggtgatttttgggtcgaaattgact 4882487  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||| ||| ||||| |||||||||||    
T  4882488 ctaaatcgcccatctgaaaagaagaagaa 4882516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20411665 - 20411537
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || | ||| || |||||| || ||||||| ||||||||||||||| ||||||||    
T  20411665 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatttttgggtcaaaattgacc 20411566  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||| ||| | |||||||||||    
T  20411565 ataaatcacccatctaaaaagaagaagaa 20411537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 45750570 - 45750442
Alignment:
Q  1 aaaacaaacgaaagaaaac-agaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||| |||||||| |||||||||  | ||||||   |||||||||||||| ||||||||    
T  45750570 aaaacaaacgaaagaaaaccaaaaatatgtgaaataacttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgacc 45750471  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||||| |||||||||||    
T  45750470 ttaaatcacccctctgaaaagaagaagaa 45750442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29205377 - 29205209
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||| ||| |||||||||||||| || ||  | | ||||||||||||||| ||||||||    
T  29205377 aaaacaaacaaaagaaaacagaaaatatatgaaatcacttattcaattatgatagaaggaaaaacaattccaaggggtgatttttgggtcaaaattgacc 29205278  T
Q  100 ctaaatcacccctctgacaagaa------gaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||| ||| | |||||      ||||||| ||| |||| ||||||||| |||||||||||||    
T  29205277 ctaaatcacccgtctaaaaagaagaagacgaagaaaagggcgacggctagggtttgagaaggagagaag 29205209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 45193655 - 45193783
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg-aaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | || ||| |||||| | |||||||    
T  45193655 aaaacaaacgaaaggaaacggaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcggaggggt-attattgggttaaaattgac 45193753  T
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||| |||||||||||||||||||||    
T  45193754 cctaaatcgcccctctgacaagaagaagaa 45193783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 17347689 - 17347563
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| |||||||||||||||  ||||||||||||||||||  ||| |||||||| ||||| |||||||||| ||||||||| ||||| ||||||||    
T  17347689 aaaacaaa-gaaagaaaacagaaaagatgtgaaatcacttattcctttatgatagaagaaaaaacaactcggatgggtgattttt-ggtcaaaattgacc 17347592  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||| || |||||||||||||||||    
T  17347591 ctaaatcatccatctgacaagaagaagaa 17347563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 18343706 - 18343578
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||| | ||| | |||||||||||| || ||| | | ||||||||||||||| |||||| |    
T  18343706 aaaacaaacgaaagaaaacagaaaatatgtgaaatcactcatttaattaaggtagaaggaaaaacaaatcgaaggggtgatttttgggtcaaaattgatc 18343607  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||| || |||||    
T  18343606 ctaaatcacccctctgacaacaacaagaa 18343578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 42276444 - 42276301
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaa 103  Q
    ||||||||||||||| |||| |||||||||||| ||||| | ||| |||||||| ||||| || ||||| | |||||||| | |||| || | |||||||    
T  42276444 caaacgaaagaaaactgaaaatatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggaggggtgatttt-gtgtcaaaaataaccctaa 42276346  T
Q  104 atcacccctctgacaagaagaagaaatgggtgacgactagggttt 148  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  42276345 atcacccctctgaaaagaagaagaaaagggtgacgactagggttt 42276301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13488565 - 13488692
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||| ||| | | |||||||||| || ||||||| ||||||||||||||| ||| ||||    
T  13488565 aaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgatttttgggtcaaaatcgacc 13488664  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||| ||||||||||| || |||||    
T  13488665 ctaaatca-ccctctgacaacaacaagaa 13488692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 32878797 - 32878634
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    ||||||||||||||||||  ||||||||||||| |||||||| | |||||||||| ||||||| |||||||| |  ||| |||||||||| |||| ||||    
T  32878797 aaaacaaacgaaagaaaattgaaatatgtgaaa-cacttatttaattaggatagagggaaaaacaactcggaaggatga-ttttgggtcaaaattaaccc 32878700  T
Q  101 taaatcacccctct------gacaagaagaagaaatgggtgacgactagggtttaagaaggagaga 160  Q
    |||||||||| |||      || |||||||||||| ||||||||  ||| |||| |||||||||||    
T  32878699 taaatcacccatctttgatagataagaagaagaaaggggtgacggttagagtttgagaaggagaga 32878634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37822374 - 37822471
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| || || || | || |||||||||||| ||||||    
T  37822374 aaaacaaatgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaagggtaatttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44517239 - 44517157
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgattt 82  Q
    ||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||| || ||||| | |||||||    
T  44517239 aaaacaaacgaaagaaagcagaaaatatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaagggtgattt 44517157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51418105 - 51418037
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactc 69  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |||||    
T  51418105 aaaacaaacgaaagaaaacagaaaatatgtgaaatcactt-ttcaattaggatagaaggaaaaacaactc 51418037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10627092 - 10627020
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||| || |||||| ||||||||    
T  10627092 aaaacaaacgaaagaaaacagaaaatatgtgaaattacttattcaattaggatataaagaaaaacaactcgga 10627020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29726625 - 29726688
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaa 63  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||||| |||||||||    
T  29726625 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcgattaggatataaggaaaaa 29726688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 33125865 - 33125996
Alignment:
Q  30 gaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctct------gacaagaag 123  Q
    ||||||||||||||| |||  | ||||||||||| || |  ||||||||||||| |||||| |||||||||||||||||| || |      ||||| |||    
T  33125865 gaaatcacttattcaattataaaagaaggaaaaacaatttagatgagtgatttt-gggtcaaaattgaccctaaatcacctcttttcaatagacaaaaag 33125963  T
Q  124 aagaaatgggtgacgactagggtttaagaagga 156  Q
    |||||||| |||||||||| ||||| |||||||    
T  33125964 aagaaatgagtgacgactaaggtttgagaagga 33125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 5832243 - 5832167
Alignment:
Q  92 aattgaccctaaatcacccctctgacaa------gaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||||||||||| ||||      |||||||||| | |||||| |||||||||||||||||||||||    
T  5832243 aattgaccctaaatcacccctcttacaaaaagaagaagaagaaaggagtgacggctagggtttaagaaggagagaag 5832167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4871055 - 4871183
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||| || |||| ||||| |||||||||| ||||||||| |||| ||| ||||||||| || |||||   ||||||| || |||| |||||| |    
T  4871055 aaaacaaacggaaaaaaatagaaaatatgtgaaataacttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtcaaaattgatc 4871154  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||| ||  | |||||||||||    
T  4871155 ttaaatcacccgtcaaaaaagaagaagaa 4871183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 33939082 - 33939154
Alignment:
Q  51 atagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaag 123  Q
    |||||| |||||| || || || | ||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  33939082 atagaaagaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaag 33939154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 9298443 - 9298580
Alignment:
Q  1 aaaacaaacgaaagaaaac-agaaatatgt-gaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||||||||   ||||| || ||||||| ||||| |  ||||||||||||||||| |||||||| | ||||  ||||| ||| |||||||    
T  9298443 aaaacaaacgaaagaaaacttaaaatacgtggaaatcaattatttaactaggatagaaggaaaaacaactcgga-gggtga-ctttggttcaaaattgac 9298540  T
Q  99 cctaaatcacccctct------gacaagaagaagaaatgg 132  Q
    |||||||||||| |||      ||||||||||||||||||    
T  9298541 cctaaatcacccttcttcaatagacaagaagaagaaatgg 9298580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15391281 - 15391325
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattca 44  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||    
T  15391281 aaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattca 15391325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 47551161 - 47551109
Alignment:
Q  76 gtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||| ||||||||    
T  47551161 gtgatttttaggtcaaaattggctctaaatcacccctctgacaaaaagaagaa 47551109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 37825450 - 37825515
Alignment:
Q  99 cctaaatcacccctctgacaa--gaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||| ||| ||  |||||||||| | |||||| ||||||||| |||||||||||||    
T  37825450 cctaaatcacccctttgaaaaaagaagaagaaaagagtgacggctagggtttgagaaggagagaag 37825515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 23320433 - 23320392
Alignment:
Q  121 aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||| | |||||||||||||||| |||||||||||||    
T  23320433 aagaagaaaggagtgacgactagggtttgagaaggagagaag 23320392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 29726700 - 29726729
Alignment:
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||||||||||||||||    
T  29726700 cctaaatcacccctctgacaagaagaagaa 29726729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15791304 - 15791344
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcactta 40  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  15791304 aaaacaaacgaaagaaaacagaaaatatgttaaatcactta 15791344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28399350 - 28399414
Alignment:
Q  1 aaaacaaacgaaagaaaac-agaaatatgtg-aaatcacttattcagttaggatagaaggaaaaa 63  Q
    ||||||||||||||||||| | ||||||||| |||||||||||| | ||| |||| |||||||||    
T  28399350 aaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattatgatataaggaaaaa 28399414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17096268 - 17096432
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataac---tcggatgagtgatttttgggtcagaattg 96  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| |||   | ||| | |||||| |||||||| |||||    
T  17096268 aaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggtgattattgggtcaaaattg 17096367  T
Q  97 accctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  17096368 accctaaatcacccctctgacaagaagaagaaatgggtgacaactagggtttgagaagaagagaa 17096432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17699645 - 17699480
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  17699645 aaaacaaacgaaagaaaacagaaaagatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgacc 17699546  T
Q  100 ctaaatcacccctctgacaagaaga---agaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||| | ||||| |||||||   ||||| |||||||||||||||||| |||||||||||||    
T  17699545 ctaaatcactcatctgaaaagaagaagaagaaaagggtgacgactagggtttgagaaggagagaag 17699480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 17331420 - 17331292
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  17331420 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgacc 17331321  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||| ||||||||    
T  17331320 ctaaatcacccctctgacaacaagaagaa 17331292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29097881 - 29097716
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || ||||| | ||||| ||||||||| ||||||||    
T  29097881 aaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctttgggtcaaaattgacc 29097782  T
Q  100 ctaaatcacccctctgacaagaagaaga--aatgggt-gacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||  |||||||||||||  || |||| |||||||||||||| |||||||||||||    
T  29097781 ctaaatcacccctaggacaagaagaagaagaaagggtcgacgactagggtttgagaaggagagaag 29097716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 28040721 - 28040593
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||  | | ||| | ||||||||||||||| ||||||||    
T  28040721 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgacc 28040622  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||||| |||||||||||    
T  28040621 gtaaatcacccctctgaaaagaagaagaa 28040593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33164497 - 33164625
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || ||||| |||||||||||| |||| ||||||||    
T  33164497 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaattcggaggagtgatttttgagtcaaaattgacc 33164596  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||||||||||||||| || |||||    
T  33164597 ataaatcacccctctgacaacaacaagaa 33164625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27241156 - 27240994
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || || || | ||||||||||||||| |||||| |    
T  27241156 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttttgggtcaaaattgatc 27241057  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
     |||||||||| ||| | ||||||||||||  ||||||   |||||||| ||||||| |||||    
T  27241056 ataaatcacccatctaaaaagaagaagaaagaggtgacagatagggtttgagaaggaaagaag 27240994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 39531433 - 39531595
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||||||| |  ||| |||||||||| ||||||||     
T  39531433 aaaacaaacaaaagaaaacagaaatatgtgaaatcacttattcaattacgatagaagg-aaaacaactcggagggatga-ttttgggtcaaaattgacct 39531530  T
Q  101 taaatcacccctctgacaa---gaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||| ||||| ||   |||||| ||| |||||||| ||||||||| |||||||||||||    
T  39531531 taaatcacccatctgagaagatgaagaataaaggggtgacggctagggtttgagaaggagagaag 39531595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6281136 - 6281008
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||| |||| |||||||||||||||| || || | ||||||||||||||| ||||||||    
T  6281136 aaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgacc 6281037  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||| | |||||||||||    
T  6281036 ataaatcacccctctaaaaagaagaagaa 6281008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32347743 - 32347866
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg-aaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||| || ||||| | ||||||||||||||| | |||||    
T  32347743 aaaacaaacgaaataaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtgatttttgggtcaaagttgac 32347842  T
Q  99 cctaaatcacccctctgacaagaa 122  Q
    |||||||||||||||||| |||||    
T  32347843 cctaaatcacccctctgaaaagaa 32347866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6635342 - 6635173
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggat-gagtgatttttgggtcagaattgac 98  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||| ||  | ||||||||||||||| ||||| |    
T  6635342 aaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaactcagagagggtgatttttgggtcaaaattggc 6635243  T
Q  99 cctaaatcacccctctgacaa------gaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||| |||||||||||      |||||||||| |||||||| |||| |||| |||| ||||||||    
T  6635242 cctaaatcatccctctgacaagaaggagaagaagaaaggggtgacggctagagtttgagaaagagagaag 6635173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42609236 - 42609127
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||    
T  42609236 aaaacaaacaaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcggatgagtgatttttaggtcaaaattgacc 42609137  T
Q  100 ctaaatcacc 109  Q
    ||||||||||    
T  42609136 ctaaatcacc 42609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 43493964 - 43493839
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||| || |||||   ||||||||||| ||| ||||||||    
T  43493964 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgacc 43493865  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
    ||||||||||||||| | ||||||||    
T  43493864 ctaaatcacccctctaaaaagaagaa 43493839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 3740448 - 3740322
Alignment:
Q  2 aaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||| || || ||||  ||||||||| |||| |||| ||||    
T  3740448 aaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaagg-aaaacaattcagatggatgatttttgagtcaaaattaaccc 3740350  T
Q  101 taaatcacccctctgacaagaagaagaa 128  Q
    |||||||| ||||||| |||||||||||    
T  3740349 taaatcacacctctgaaaagaagaagaa 3740322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 7771888 - 7771997
Alignment:
Q  53 agaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaaga 152  Q
    ||||||||||| || ||||| | ||||||||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||  |||||||||| ||    
T  7771888 agaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaaaagggtgacagctagggtttagga 7771987  T
Q  153 aggagagaag 162  Q
    ||||||||||    
T  7771988 aggagagaag 7771997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 178135 - 178299
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| | ||||||||   |||||||||| |||| ||||||||    
T  178135 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatataaggaaacacaactcggagaggtgatttttgagtcaaaattgacc 178234  T
Q  100 ctaaatcacccctctgacaag--aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
     ||||||||| | |||| |||  ||||||||| |||| ||  |||| | || |||||||||||||    
T  178235 ttaaatcacctcactgaaaagaaaagaagaaaagggttaccgctagaggttgagaaggagagaag 178299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 34431148 - 34431045
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  ||||||| ||||| || ||| ||| ||||||||||||||| ||||||||||||    
T  34431148 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaa 34431049  T
Q  104 atca 107  Q
    ||||    
T  34431048 atca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6681905 - 6682031
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    ||||||||||||||||   | ||||||||||||||||||||||| ||  |||| ||||||||| |||||| |||||||||||||||| || | ||||| |    
T  6681905 aaaacaaacgaaagaattga-aaatatgtgaaatcacttattcaattcagataaaaggaaaaacaactcgaatgagtgatttttgggccaaatttgactc 6682003  T
Q  101 taaatcacccctctgacaagaagaagaa 128  Q
    |||||||||| |||  ||||||||||||    
T  6682004 taaatcacccttctcgcaagaagaagaa 6682031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39179857 - 39179939
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgattt 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||| | |||||||    
T  39179857 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaataattcggaggggtgattt 39179939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 26295087 - 26295215
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||| ||||| | ||| |||||||||||||| | |||||||||||||||| |  ||||| | ||||||||||| ||| ||||||||    
T  26295087 aaaacaaaagaaagaaaatagaaaatttgttaaatcacttattcaataaggatagaaggaaaaacacttcggaggggtgatttttggatcaaaattgacc 26295186  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||| |||| | | |||||||||    
T  26295187 ctaaatcacctctctaaaatgaagaagaa 26295215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 981076 - 981182
Alignment:
Q  22 aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaaga 121  Q
    |||||||||||||||||  |||| ||| |||||||||||||| |||||||| | | |||| |||||||| |||||| |||||||||||| ||| | ||||    
T  981076 aaatatgtgaaatcactcgttcaattatgatagaaggaaaaacaactcggaggggcgattattgggtcaaaattgatcctaaatcacccttctaaaaaga 981175  T
Q  122 agaagaa 128  Q
    |||||||    
T  981176 agaagaa 981182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 12439663 - 12439791
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||  |||||||||| |||||| || ||||| | ||||||||| ||||| ||||  ||    
T  12439663 aaaacaaacgaaagaaaacaaaaaatatatgaaatcacttattcaactaggatagaatgaaaaacaattcgga-gggtgatttttaggtcaaaattatcc 12439761  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
    |||||||||| |||  | ||||||||||||    
T  12439762 ctaaatcacctctcaaaaaagaagaagaaa 12439791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20483278 - 20483150
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcag-ttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||  |||| ||| ||||||||| || | ||| | ||||||||||||||| ||||||     
T  20483278 aaaacaaacaaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaacaatttggagg-gtgatttttgggtcaaaattgat 20483180  T
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||  | |||||||||||    
T  20483179 cctaaatcacccctccaaaaagaagaagaa 20483150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 17687297 - 17687176
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| ||||||||| |||| |||||||||| ||||||||| ||| |||||||||||||| |||||||||  |||||||| |         |||||    
T  17687297 aaaacaaacaaaagaaaactgaaaatatgtgaaataacttattcaattaagatagaaggaaaaacaactcggattggtgattttgg--------atgacc 17687206  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
    ||||||||||||||| ||||||||||||||    
T  17687205 ctaaatcacccctctaacaagaagaagaaa 17687176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12891768 - 12891706
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaa 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  12891768 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaa 12891706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23882145 - 23882267
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||| |||||| | ||| ||||| |||||||||||||| || |||||||| |||||| || | ||||   |||||||||  ||| ||||||||    
T  23882145 aaaacaaacgatagaaaatataaaatatgtcaaatcacttattcaatttggatagaaagaaaaacaatttggattgatgatttttgaatcaaaattgacc 23882244  T
Q  100 ctaaatcacccctctgacaagaa 122  Q
    ||||||||||||||||| |||||    
T  23882245 ctaaatcacccctctgaaaagaa 23882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 42396541 - 42396671
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||| ||| ||||||||||| |||||||| ||| |||||||| |||||||| ||| |    |||||||||||||| ||||||||    
T  42396541 aaaacaaatgaaagaaaacaaaaaatatgtgaaatcgcttattcaattaagatagaagaaaaaataattcgaaaagatgatttttgggtcaaaattgacc 42396640  T
Q  100 c-taaatcacccctctgacaagaagaagaaa 129  Q
    | ||||| ||| |||| | ||||||||||||    
T  42396641 cataaataaccactctaaaaagaagaagaaa 42396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3079334 - 3079406
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    ||||||||||||| ||| |||||| ||||| |||||||||||||| ||| |||| ||||||||| || |||||    
T  3079334 aaaacaaacgaaaaaaagcagaaaatatgttaaatcacttattcaattatgatataaggaaaaacaaatcgga 3079406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 3079419 - 3079478
Alignment:
Q  102 aaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||| || || |||||| |||||||||||||| ||| |||||||||||||    
T  3079419 aaatcacccctctgaaaaaaa-aagaaaagggtgacgactaggatttgagaaggagagaag 3079478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18653874 - 18653806
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataact 68  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||| |||||||| ||| ||||| ||||    
T  18653874 aaaacaaacgaaagaaatcagaaaatatacgaaatcacttattcaattaggatataagaaaaaacaact 18653806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25962019 - 25961907
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa--tatgt-gaaatcacttattcagttaggatagaaggaaaaa-taactcggatgagtgatttttgggtcagaattg 96  Q
    |||||||| |||||||||| ||||  ||||| ||||||||||||| | |||||||| |||||||||  |||||| |||  ||| || ||| ||| |||||    
T  25962019 aaaacaaaggaaagaaaactgaaaaatatgtagaaatcacttatttaattaggatataaggaaaaaccaactcgaatggatga-ttctggatcaaaattg 25961921  T
Q  97 accctaaatcaccc 110  Q
    ||||||||||||||    
T  25961920 accctaaatcaccc 25961907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 74256 - 74095
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||| ||||||      
T  74256 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgatt 74157  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    ||||||||| ||||||| || || |||||| |||||||| ||||||||| ||||||||||||    
T  74156 ctaaatcactcctctgaaaaaaaaaagaaaagggtgacggctagggtttgagaaggagagaa 74095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36691836 - 36691964
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  36691836 aaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaataactcggaggggtgatttttgggtcaaaattgacc 36691935  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||| ||||    
T  36691936 ctaaatcacccctctgacaagaaggagaa 36691964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 36624731 - 36624887
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||  |||||||    
T  36624731 aaaacaaacaaaagaaaacagaaaatatgtgaaatcacttatttagttaggatagaaggaaaaacaattcggatgggtgatttttgggtcatgattgacc 36624830  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaagga 156  Q
    || |||||||||||||| |||||||| ||| |||||||   |||||||| |||||||    
T  36624831 ctgaatcacccctctgaaaagaagaataaaagggtgacagttagggtttgagaagga 36624887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 14585554 - 14585386
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |  || ||||||||||||||||| |||||||     
T  14585554 aaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgact 14585455  T
Q  100 ctaaatcacccctctgacaagaa------gaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||||| |||||      ||||||| ||| |||||||||||||| |||||||||||||    
T  14585454 ctaaatcacccctctgaaaagaagaagacgaagaaaagggcgacgactagggtttgagaaggagagaag 14585386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 48652477 - 48652605
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || ||||| | ||||||||||||||| | ||||||    
T  48652477 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaagttgacc 48652576  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||||||||    
T  48652577 ctaaatcacccctctgacaagaagaagaa 48652605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 53155467 - 53155629
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||| | |||||||| ||||||||| || ||| ||| ||||||||||||||| ||||||||    
T  53155467 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgacc 53155566  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||| | ||||||||||||  ||||| |  |||||||| |||| ||||||||    
T  53155567 ctaaatcacccctctaaaaagaagaagaaaatggtgatggttagggtttgagaacgagagaag 53155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 32080791 - 32080960
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||| | |||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  32080791 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgacc 32080890  T
Q  100 ctaaatcacccctctgac------aagaagaagaaat-gggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||| ||||||      ||||||||||||| ||| |||| ||||||||| |||||||||||||    
T  32080891 ctaaatcacccatctgacaacaagaagaagaagaaatggggcgacggctagggtttgagaaggagagaag 32080960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1074931 - 1075058
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaata-tgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||||||||   |||||| ||||||||||| |||| ||| ||||||||| |||||||||| ||||||||||||||| ||||||||    
T  1074931 aaaacaaacgaaagaaaacagaaaacgtgtgaa-tcacttattcaattagaatataaggaaaaacaactcggatgggtgatttttgggtcaaaattgacc 1075029  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||||||||||||||||||||||||    
T  1075030 ataaatcacccctctgacaagaagaagaa 1075058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13702009 - 13702137
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||| ||| | | |||| |||||||||| ||||||||    
T  13702009 aaaacaaatgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaagaaaaataattcgaaggggtgacttttgggtcaaaattgacc 13702108  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  13702109 ctaaatcacccctctgaaaagaagaagaa 13702137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31270418 - 31270290
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||||||||| ||||||||    
T  31270418 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaataattcgaaggggtgatttttgggtcaaaattgacc 31270319  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||| ||| | ||||| |||||    
T  31270318 ctaaatcacccatctaaaaagaataagaa 31270290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 31462783 - 31462911
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||||||||| || ||| | | ||||||||||||||| ||||||||    
T  31462783 aaaacaaacaaaagaaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgacc 31462882  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  31462883 ctaaatcacccctctgaaaagaagaagaa 31462911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 35174796 - 35174635
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| || ||  | | ||||||||||||||  ||||||||    
T  35174796 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaaggggtgatttttgggtcgaaattgacc 35174697  T
Q  100 ctaaatcacccctctg---acaagaagaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    || ||| |||||| ||   | |||||||||||| |||||||||||||||||| |||||||||    
T  35174696 cttaataacccctatgaaaagaagaagaagaaaagggtgacgactagggtttgagaaggaga 35174635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 39610304 - 39610132
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaa--------aaataactcggatgagtgatttttgggtcag 91  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||||        ||| |||||||| | |||||| ||||||||     
T  39610304 aaaacaaacgaaaggaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaa 39610205  T
Q  92 aattgaccctaaatcacccctctgacaagaaga---agaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    |||||||| ||||||||||||||||||||||||   ||||| |||||||| ||||||||| ||||||||||||    
T  39610204 aattgaccataaatcacccctctgacaagaagaagaagaaaggggtgacgtctagggtttgagaaggagagaa 39610132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40013309 - 40013476
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttagga---tagaaggaaaaataactcggatgagtgatttttgggtcagaattg 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||   |||||||||||| || ||| ||| ||||||||||||||| |||||    
T  40013309 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcgaatgggtgatttttgggtcaaaattg 40013408  T
Q  97 accctaaatcacccctctg---acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    || |||||||| || ||||   | ||||||||||||  ||||||||||| ||||| |||||||||||||    
T  40013409 acactaaatca-ccatctgaaaagaagaagaagaaaatggtgacgactatggtttgagaaggagagaag 40013476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48400991 - 48400863
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |  |||| |||||||||||| || || |||| ||||||||||||||| ||||||||    
T  48400991 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatttttgggtcaaaattgacc 48400892  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| | |||||||||||    
T  48400891 ctaaatcacccctctaaaaagaagaagaa 48400863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 11819175 - 11819056
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||| | |||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  11819175 aaaacaaatgaaagaaaacataaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgacc 11819076  T
Q  100 ctaaatcacccctctgacaa 119  Q
    ||||||||||||||||||||    
T  11819075 ctaaatcacccctctgacaa 11819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34960895 - 34961060
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||| ||||| || || || | ||||||||||||||| ||||||||    
T  34960895 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttttgggtcaaaattgacc 34960994  T
Q  100 ctaaatcacccctctgacaagaag---aagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||| |||||||||||| ||||||   ||| || ||||||||  |||| ||| |||||||||||||    
T  34960995 ctaagtcacccctctgaaaagaagaaaaagtaaggggtgacggttaggatttgagaaggagagaag 34961060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 41868335 - 41868488
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg-aaaaataactcggatgagtgatttttgggtcagaattgacccta 102  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||||||| ||| |||| | ||||    
T  41868335 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcagatgagtgatttttggatcaaaatttatccta 41868434  T
Q  103 aatcac---ccctctgacaagaagaagaaatgggtgacgactagggtttaagaa 153  Q
    ||||||   ||||| | ||||||||| |||||| ||||||||| ||||| ||||    
T  41868435 aatcaccctccctccgtcaagaagaaaaaatggatgacgactaaggtttgagaa 41868488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3457035 - 3456907
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||| || |||||   ||||||||||| ||| ||||||||    
T  3457035 aaaacaaaggaaagaaaacaaaaaatatgttaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgacc 3456936  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||||| |||||||||||    
T  3456935 ataaatcacccctctgaaaagaagaagaa 3456907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 55090620 - 55090748
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||| | ||| | |||||||||||| || ||||| | |||||||||||||   |||| |||    
T  55090620 aaaacaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggttgaaattaacc 55090719  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||||||||    
T  55090720 ctaaatcacccctctgacaagaagaagaa 55090748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 54239055 - 54239180
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||| | ||| | || |||    
T  54239055 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattttttgatcaaatttaacc 54239154  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
     ||||||||||||  || ||||||||    
T  54239155 ttaaatcacccctgcgaaaagaagaa 54239180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 30156324 - 30156443
Alignment:
Q  6 aaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaa 104  Q
    |||||||||||| || ||| |||||||||||||||||||| |||||||| ||||||||  || ||||| | ||||||||||||||| |||||||||||||    
T  30156324 aaacgaaagaaatcataaaatatgtgaaatcacttattcaattaggataaaaggaaaac-aattcggaggggtgatttttgggtcaaaattgaccctaaa 30156422  T
Q  105 tcacccctctgacaagaagaa 125  Q
    |||||||||||| ||||||||    
T  30156423 tcacccctctgaaaagaagaa 30156443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 38527355 - 38527232
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||| || | ||||| ||||||||||| |||  ||||| |    
T  38527355 aaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagatagaaggaaaaacaatttggatgtgtgatttttggttcaagattgatc 38527256  T
Q  100 ctaaatcacccctctgacaagaag 123  Q
    ||||||||||||||| | ||||||    
T  38527255 ctaaatcacccctctaaaaagaag 38527232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 27189445 - 27189580
Alignment:
Q  15 aaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctc 113  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||| || ||||| |||| |||||||| ||| ||||||| ||||||||||||||    
T  27189445 aaaacagaaattatgtgaaattacttattcaattaggatagaaggaaaaacaattcggaagagtaatttttggatcaaaattgactctaaatcacccctc 27189544  T
Q  114 tgaca---agaagaagaaatgggtgacgactagggtt 147  Q
    | |||   ||||||||||| |||||||| ||||||||    
T  27189545 t-acaaagagaagaagaaaggggtgacggctagggtt 27189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 49628124 - 49628254
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| || || || | ||||||||| ||||| ||||||||    
T  49628124 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcagaggggtgatttttaggtcaaaattgacc 49628223  T
Q  100 c-taaatcacccctctgacaagaagaagaaa 129  Q
    |  ||||||||||||| | ||||||||||||    
T  49628224 caaaaatcacccctctaaaaagaagaagaaa 49628254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22485057 - 22484961
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattg 96  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| ||  |||| ||||||||||||||||| |||||    
T  22485057 aaaacaaacgaaagaaaacagaaaatatgcgaaatcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttgggtcaaaattg 22484961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40883905 - 40884062
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaat-aactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||||  || ||| ||   |||||||||||||| |||||||    
T  40883905 aaaacaaacgaaagaaaacagaaaataagtgaaatcacttattcaattaggataaaaggaaaaaacaattcgaattgatgatttttgggtcaaaattgac 40884004  T
Q  99 cctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||      | ||||||||  | | |||||||||||||| |||||||||||||    
T  40884005 cctaaatcacccct------aaaagaagaagggagcgacgactagggtttgagaaggagagaag 40884062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19645313 - 19645203
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| |||| |||||||||| |||||||||||||||||| | |||||| ||||| ||||| || |||||||  || ||||| ||||| ||||||||    
T  19645313 aaaacaaaggaaaaaaaacagaaaatatgtgaaatcacttatttaattaggacagaagaaaaaacaattcggatggatggtttttaggtcaaaattgacc 19645214  T
Q  100 ctaaatcaccc 110  Q
    |||||||||||    
T  19645213 ctaaatcaccc 19645203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 53402691 - 53402565
Alignment:
Q  31 aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaag---- 126  Q
    |||||||||||| | |||| ||||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||| | | | | |||||||||        
T  53402691 aaatcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcactcatttaaaaagaagaagaaga 53402592  T
Q  127 aaatgggtgacgactagggtttaagaa 153  Q
    ||| |||||||||||||||||| ||||    
T  53402591 aaaggggtgacgactagggtttgagaa 53402565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4206548 - 4206676
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||| | ||| ||||||||| |||||||||| |||||||| | ||||||| || ||||| | ||||||||| | ||| ||||||||    
T  4206548 aaaacaaacaaaagaaaataaaaaatatgtgaaaacacttattcaattaggatatatggaaaaacaattcggaggggtgattttttgatcaaaattgacc 4206647  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||| | |||| ||||||    
T  4206648 ataaatcacccctctaaaaagaggaagaa 4206676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 24483715 - 24483843
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| | | ||||||||||| |||||||||||||||||||| ||| ||||||| |||||| || || |||| ||||||| || |||| |||||||     
T  24483715 aaaacaaatgtatgaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcagatgggtgatttgtgtgtcaaaattgact 24483814  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    | |||||||| ||| || |||||||||||    
T  24483815 ccaaatcacctctcagaaaagaagaagaa 24483843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 19861316 - 19861433
Alignment:
Q  1 aaaacaaacgaaagaaaa-cag-aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||| ||| ||  |||||| ||| |||||  ||| |||||||||| |||| |||||||    
T  19861316 aaaacaaacgaaaaaaaaacaggaaatatgtgaaatcacttattcaattatgag-gaaggacaaacaactc--atgggtgatttttgagtcaaaattgac 19861412  T
Q  99 cctaaatcacccctctgacaa 119  Q
    ||||||||||| |||||||||    
T  19861413 cctaaatcacctctctgacaa 19861433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 33637422 - 33637386
Alignment:
Q  92 aattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||||||||||||||||    
T  33637422 aattgaccctaaatcacccctctgacaagaagaagaa 33637386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34103754 - 34103798
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattca 44  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  34103754 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattca 34103798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4817867 - 4817930
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaa 63  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||| |||||||| || ||||||    
T  4817867 aaaacaaacgaaagaaaatagaaaatatgtgaaatcacctattcaattaggataaaaagaaaaa 4817930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33637495 - 33637423
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    |||| ||||||||||||||||||| |||||||||||  ||||||| ||| | |||||||||||| || |||||    
T  33637495 aaaataaacgaaagaaaacagaaaatatgtgaaatcttttattcaattaaggtagaaggaaaaacaaatcgga 33637423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2147819 - 2147756
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtg-aaatcacttattcagttaggatagaaggaaaa 62  Q
    |||||||| |||||||||| |||| |||||| |||||||||||||| ||||||||||| |||||    
T  2147819 aaaacaaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaacgaaaa 2147756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 106072 - 106187
Alignment:
Q  1 aaaacaaacgaaagaaaac-agaaatatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggat--gagtgatttttgggtcagaattg 96  Q
    ||||||||||||||||||| | ||||||||| |||||||||||| | ||||| ||||| |||||| ||| | |||  | |||| |||||| ||  |||||    
T  106072 aaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagggtagaatgaaaaacaac-ccgatgggggtga-ttttggatcgaaattg 106169  T
Q  97 accctaaatcacccctct 114  Q
    ||||||||||||||||||    
T  106170 accctaaatcacccctct 106187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3312535 - 3312491
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattca 44  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  3312535 aaaacaaacgaaagaaaacttaaaatatgtgaaatcacttattca 3312491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12704779 - 12704614
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || ||| | | ||||||||||||||| ||||||||    
T  12704779 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgacc 12704680  T
Q  100 ctaaatcacccctctgacaagaaga---agaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||| | |||||||   ||||| |||||||||||||||||| |||||||||||||    
T  12704679 ctaaatcacccctctaaaaagaagaagaagaaaagggtgacgactagggtttgagaaggagagaag 12704614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22597227 - 22597060
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||||||||| |||||||| |  |||||||||||||| ||||||||    
T  22597227 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgacc 22597128  T
Q  100 ctaaatcacccctctgacaagaagaaga-----aatgggtgacgactagggtttaagaaggagagaag 162  Q
     |||||||||||||||||||||| ||||     || |||||||||||||||||| |||||||||||||    
T  22597127 ttaaatcacccctctgacaagaaaaagaagaagaaagggtgacgactagggtttgagaaggagagaag 22597060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43474157 - 43474285
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  43474157 aaaacaaacgaaagaaaacagaaaatttgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgacc 43474256  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| | |||||||||||    
T  43474257 ctaaatcacccctctaaaaagaagaagaa 43474285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 27095797 - 27095636
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| ||||| ||||||||    
T  27095797 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttaggtcaaaattgacc 27095698  T
Q  100 ctaaatcacccctctgacaag---------aagaagaaatgggtgacgactagggtttaaga 152  Q
    ||||||||||| |||||||||         ||||||||| ||||||||||||||||||||||    
T  27095697 ctaaatcacccatctgacaagaagacgaagaagaagaaaggggtgacgactagggtttaaga 27095636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33012169 - 33012041
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||| |||| ||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  33012169 aaaacaaacgaaacaaaactgaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgacc 33012070  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||| ||||| |||||||||||    
T  33012069 ctaaatcacccgtctgaaaagaagaagaa 33012041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20561161 - 20561324
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||||||| |||||||||  || ||||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  20561161 aaaacaaacgaaagaaaacagaaaatatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgacc 20561260  T
Q  100 ctaaatcacccctctgacaagaag-aagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||||||  ||||| || ||| |||||||| ||||||||| |||||||| ||||    
T  20561261 ctaaatcacccctctgaacagaagaaaaaaaagggtgacggctagggtttgagaaggagggaag 20561324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25067944 - 25067815
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  25067944 aaaagaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgacc 25067845  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
    |||||||||| |||| ||||||||||||||    
T  25067844 ctaaatcacctctctaacaagaagaagaaa 25067815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 18089426 - 18089582
Alignment:
Q  6 aaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||| ||| ||||| || ||||| ||||||||||||| ||| |||||||||||||    
T  18089426 aaactaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataagaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaa 18089525  T
Q  105 tcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    |||||||||| | || || || ||| |||||||| ||||| |||||||| |||||||    
T  18089526 tcacccctctaaaaaaaaaaaaaaaagggtgacggctaggatttaagaacgagagaa 18089582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 38535334 - 38535462
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| || ||  | | ||| ||||||||||| ||||||||    
T  38535334 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgctttttgggtcaaaattgacc 38535433  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  38535434 ctaaatcacccctctgaaaagaagaagaa 38535462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 44942377 - 44942249
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||| |||||||||||| ||||| |||||||| | ||||||||||||||| ||||||||    
T  44942377 aaaacaaacaaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttttgggtcaaaattgacc 44942278  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||| ||||| |||||||||||    
T  44942277 ataaatcacccatctgaaaagaagaagaa 44942249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 11937893 - 11938016
Alignment:
Q  7 aacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaa-ggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaa 104  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||| || ||||| | ||||||||||||||| |||||||||||||    
T  11937893 aacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaa 11937992  T
Q  105 tcacccctctgacaagaagaagaa 128  Q
    |||||||||||| |||||||||||    
T  11937993 tcacccctctgaaaagaagaagaa 11938016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4604336 - 4604484
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||| ||||||||    
T  4604336 aaaacaatcgaaagaaagcagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgaatgagtaatttttgggtcaaaattgacc 4604435  T
Q  100 ctaaatcacccctctg---acaagaagaagaaatgggtgacgactaggg 145  Q
     |||||||||| ||||   | |||||||||||| |||||||| ||||||    
T  4604436 ttaaatcacccttctgataaaaagaagaagaaaggggtgacggctaggg 4604484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9978698 - 9978863
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||| |||| ||||||||| || | | | | ||||||||||||||| ||||||||    
T  9978698 aaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgacc 9978797  T
Q  100 ctaaatcacccctctg---acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
     |||||||||||||||   | ||||| |||||| |||||||||||| ||||| |||| ||||||||    
T  9978798 ttaaatcacccctctggaaagaagaaaaagaaaggggtgacgactaaggtttgagaaagagagaag 9978863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15919965 - 15919838
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    |||||||||||||||||    ||||||||||||||| ||||||| |||||||||||||||||| |||||||| | ||||||||||||||| ||||||| |    
T  15919965 aaaacaaacgaaagaaattgaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgactc 15919866  T
Q  101 taaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||| | |||||| ||||    
T  15919865 taaatcacccctctaataagaaggagaa 15919838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 5754380 - 5754252
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||| ||| |||||||||||| |||||||  ||||||||||||||||| || ||||| |  |||||||||||||| ||||||||    
T  5754380 aaaacaaatgaaagaaaacaaaaaatatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgacc 5754281  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| | |||||||||||    
T  5754280 ctaaatcacccctctaaaaagaagaagaa 5754252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7072977 - 7073105
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| | |||||| | ||||||||| |||||||||||||||||  || ||| | | | ||||||||||||| ||||||||    
T  7072977 aaaacaaacgaaagaaaacagaaaatttgtgaagttacttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgacc 7073076  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  7073077 ctaaatcacccctctgaaaagaagaagaa 7073105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9690002 - 9690130
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||| |  ||||| | ||||||||||||||| | ||||||    
T  9690002 aaaacaaacgaaaaaaaacaaaaaatatgtgagatcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtcaaatttgacc 9690101  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||||| |||||||||||    
T  9690102 ttaaatcacccctctgaaaagaagaagaa 9690130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 17268154 - 17268272
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| | |  |||||||||||||| ||||||||    
T  17268154 aaaacaaacaaaa-aaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaagggatgatttttgggtcaaaattgacc 17268252  T
Q  100 ctaaatcacccctctgacaa 119  Q
     |||||||||||||||||||    
T  17268253 ataaatcacccctctgacaa 17268272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 31908845 - 31909010
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||| ||| ||||| || ||||| | ||||||||||| ||| |||||||     
T  31908845 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttttggatcaaaattgact 31908944  T
Q  100 ctaaatcacccctctgacaagaagaag---aaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||| |||||| | |||||||||   ||| |||||||  ||| ||||| |||||||||||||    
T  31908945 ctaaatcatccctctaaaaagaagaagaataaaggggtgacagctaaggtttgagaaggagagaag 31909010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28261917 - 28262049
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttag-----gatagaaggaaaaataactcggatgagtgatttttgggtcagaat 94  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||| |||      |||||||||||||| || ||||||||||||||||||||||| |||    
T  28261917 aaaacaaacgaaagaaaacagaaaatatgtaaaatcacatattcaattaaattatgatagaaggaaaaacaattcggatgagtgatttttgggtcaaaat 28262016  T
Q  95 tgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||| ||||| |||||||||||    
T  28262017 tgaccctaaatcacccatctga-aagaagaagaa 28262049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13879035 - 13879171
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaa--------aaataactcggatgagtgatttttgggtcag 91  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||        ||| |||||||| | |||||| ||||||||     
T  13879035 aaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaa 13879134  T
Q  92 aattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13879135 aattgaccctaaatcatccctctgacaagaagaagaa 13879171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 14019160 - 14019296
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaa--------aaataactcggatgagtgatttttgggtcag 91  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||        ||| |||||||| | |||||| ||||||||     
T  14019160 aaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaa 14019259  T
Q  92 aattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14019260 aattgaccctaaatcatccctctgacaagaagaagaa 14019296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36868100 - 36867935
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||  ||||| ||||||||||| |||||| | |||| ||||||||||||| || || || | |||||||||| |||| ||||||||    
T  36868100 aaaacaaacgaaagaaagtagaaaatatgtgaaatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgatttttgagtcaaaattgacc 36868001  T
Q  100 ctaaatcacccctctgacaagaagaagaa---atgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||||   |||||||||||   |  ||||||| ||||||||| |||||||||||||    
T  36868000 ctaaatcacccctctagaaagaagaagaagagaatggtgacggctagggtttgagaaggagagaag 36867935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 34416790 - 34416944
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||| ||||||||| || ||||| |  |||||||| ||||| ||||||||    
T  34416790 aaaacaaacaaaaaaaaactgaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcggagggatgattttttggtcaaaattgacc 34416889  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaag 154  Q
     || |||| |||||||| ||||||||||||  |||||||  |||||||| |||||    
T  34416890 ttagatcatccctctgaaaagaagaagaaagaggtgacggttagggtttgagaag 34416944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13740689 - 13740813
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| || |||||   ||||||||||||||| || |||||    
T  13740689 aaaacaaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgggtca-aaatgacc 13740787  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
     ||||||| ||||| || ||||||||    
T  13740788 ataaatcatccctcggaaaagaagaa 13740813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32015316 - 32015184
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagt----taggatagaaggaaaaataactcggatgagtgatttttgggtcagaatt 95  Q
    |||||||| ||| ||||||||||| |||||||||||||||||| | |    || |||| ||||||||| |||||||| | ||||||||||||||| ||||    
T  32015316 aaaacaaatgaatgaaaacagaaaatatgtgaaatcacttatttattgaattatgatataaggaaaaacaactcggaggggtgatttttgggtcaaaatt 32015217  T
Q  96 gaccctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||||| |||| ||||||||    
T  32015216 gaccctaaatcacccctctaacaaaaagaagaa 32015184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 4739421 - 4739295
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||| || |||||||||| |||||||||| ||||||| | ||||||| |||||||||| |||||||| | |||||||| |||||  ||||||||    
T  4739421 aaaacaaacggaaaaaaacagaaaatatgtgaaattacttatttaattaggatggaaggaaaaacaactcggaggggtgattttggggtc--aattgacc 4739324  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||| ||||| || |||||    
T  4739323 ctaaatcacccctccgacaaaaaaaagaa 4739295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35333597 - 35333490
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| || ||  | | ||||||||||||||| |||||| |    
T  35333597 aaaataaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaggaaaaacaattcttaggggtgatttttgggtcaaaattgatc 35333498  T
Q  100 ctaaatca 107  Q
    ||||||||    
T  35333497 ctaaatca 35333490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4426687 - 4426771
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgattttt 84  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| || |||||||| ||||||||    
T  4426687 aaaacaaatgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaaatcggatgactgattttt 4426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 34963105 - 34963262
Alignment:
Q  11 aaagaaaacagaaata-tgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacc 109  Q
    |||||||||||||| | |||||||||||||||||| ||||| |||||||||||| || || || | ||||||||| ||||| ||||||||| |||| |||    
T  34963105 aaagaaaacagaaaaaatgtgaaatcacttattcaattagggtagaaggaaaaacaaatcaga-gggtgatttttaggtcaaaattgacccaaaattacc 34963203  T
Q  110 cctctgacaa------gaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||      ||||||||||  ||||||   |||||||| |||||||||||||    
T  34963204 cctctgacaacaagaggaagaagaaagtggtgacagttagggtttcagaaggagagaag 34963262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 38384497 - 38384645
Alignment:
Q  26 atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgac-------- 117  Q
    ||||||||||||||||||| ||||| || ||||||||| || |||||   ||||||||||||||| ||||||||| ||||||||||||| ||            
T  38384497 atgtgaaatcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacccctctaacaacaacaa 38384596  T
Q  118 ----aagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
        |||||||||||| |||||||| ||||||||| |||||||||||||    
T  38384597 caagaagaagaagaaacgggtgacggctagggtttcagaaggagagaag 38384645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28231126 - 28231254
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||   | |||||||||||||| || ||||||| |||| ||| ||||||   || |||    
T  28231126 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcggatgggtga-tttagggtcaattttaacc 28231224  T
Q  100 c-taaatcacccctctgacaagaagaagaa 128  Q
    |  ||||||||||||||| |||||||||||    
T  28231225 caaaaatcacccctctgaaaagaagaagaa 28231254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 12891194 - 12891289
Alignment:
Q  76 gtgatttttgggtcagaattgaccctaaatcacccctctg---------acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||| ||||||||||||||||||||||||         | |||||||||||| |||||||||||||||||| |||||||||||||    
T  12891194 gtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaagaagaaaggggtgacgactagggtttgagaaggagagaag 12891289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 34471058 - 34470912
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtg--atttttgggtcagaattga 97  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||| ||| ||||||| || ||| || ||||| | |||  |||||||||||| ||||||    
T  34471058 aaaacaaacgaaagaaaatagaaaatatgtgaaatcactgattcaattaagatagaaagataaacaattcggaggggtgtgatttttgggtcaaaattga 34470959  T
Q  98 ccctaaatcacccctctgacaagaag---aagaaatgggtgacgacta 142  Q
    ||||||| | ||||||| | ||||||   |||||| ||||||||||||    
T  34470958 ccctaaa-cccccctctaaaaagaagaaaaagaaaagggtgacgacta 34470912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32314534 - 32314462
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||| || |||||    
T  32314534 aaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaagaaaaaacaattcgga 32314462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10287035 - 10287088
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggata 53  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10287035 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggata 10287088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4732162 - 4732059
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||   ||||   | | |||||||||| |||| ||||||||    
T  4732162 aaaacaaacgaaa-aaaacaaaaagtatgtgaaatcacttattcaattaggatagaaggaaatgcaactaacaagggtgatttttgagtcaaaattgacc 4732064  T
Q  100 ctaaa 104  Q
    |||||    
T  4732063 ctaaa 4732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 17767584 - 17767742
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacccta 102  Q
    |||| |||||||||| |||| |||||| |||||||||||| | |||||||| ||||||||| |||||| | | |||| || ||||||| ||||||| |||    
T  17767584 caaatgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatataaggaaaaacaactcgaaggggtga-ttctgggtcaaaattgactcta 17767682  T
Q  103 aatcacccctct------gacaagaagaagaaatgggtgacgactagggtttaagaagga 156  Q
    |||||||| |||      ||||||||||||||| || ||| | |||| ||||||||||||    
T  17767683 aatcacccatcttcggtagacaagaagaagaaagggttgatggctagagtttaagaagga 17767742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 7640460 - 7640530
Alignment:
Q  92 aattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||||||||||  || | ||||||||| | |||||| ||||||||| |||||||||||||    
T  7640460 aattgaccctaaatcacccctccaacgaaaagaagaaaggagtgacggctagggtttgagaaggagagaag 7640530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 41797648 - 41797548
Alignment:
Q  59 aaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    ||||| ||||| || | ||||||||| ||||| |||| ||||||||||||||||||||||   |||| ||| |||| ||| ||||||||| |||| ||||    
T  41797648 aaaaacaactctgaggggtgatttttaggtcaaaattaaccctaaatcacccctctgaca---agaaaaaaggggtaacggctagggtttgagaatgaga 41797552  T
Q  159 gaag 162  Q
    ||||    
T  41797551 gaag 41797548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 34416992 - 34417066
Alignment:
Q  87 gtcagaattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    |||| |||||||| |||||||||||||| | |||||| ||||| | ||||||  |||||||| ||||||||||||    
T  34416992 gtcaaaattgaccttaaatcacccctctaaaaagaagtagaaaggagtgacggttagggtttgagaaggagagaa 34417066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 478041 - 478202
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||| |||||||| ||||||||| || ||||||| ||||||||||||||| ||||||||    
T  478041 aaaataaacgaaaggaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcggatg-gtgatttttgggtcaaaattgacc 478139  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
     |||||||||||||| | |||||||||||| |||||||| ||||||||| |||||||||||||    
T  478140 ataaatcacccctctaaaaagaagaagaaaggggtgacggctagggtttgagaaggagagaag 478202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 29268806 - 29268935
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| |||||||| | |||||||| |||||| ||||||||    
T  29268806 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggaggggtgattttagggtcaaaattgacc 29268905  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
     |||||||||||||||||||||||||||||    
T  29268906 ttaaatcacccctctgacaagaagaagaaa 29268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24825741 - 24825613
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| |||||| |    
T  24825741 aaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttttaggtcaaaattgatc 24825642  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| |||||||||||||    
T  24825641 ctaaatcacccctctaacaagaagaagaa 24825613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22757186 - 22757021
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||| |||||||||||||||||| || |||||   |||||||||| |||| ||||||||    
T  22757186 aaaacaaacgaaaaaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgagtcaaaattgacc 22757087  T
Q  100 ctaaatcacccctctgacaagaaga---agaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||||| |||||||   ||||| |||||||| ||||||||| |||||||||||||    
T  22757086 ctaaatcacccctctgaaaagaagaagaagaaaagggtgacggctagggtttgagaaggagagaag 22757021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44757071 - 44757197
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  44757071 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgacc 44757170  T
Q  100 ctaaatcacccctctgacaagaagaag 126  Q
     |||||||||||||||| |||||||||    
T  44757171 ttaaatcacccctctgataagaagaag 44757197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 24568742 - 24568870
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||| |||| |||    
T  24568742 aaaacaaacgaaataaaacagataatatgtaaaatcacttattcaattaggatagaaggaaaaataattcggaagggtgatttttgggtcaaaattcacc 24568841  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||| |||||||||||    
T  24568842 ctaaatcacccctctgaaaagaagaagaa 24568870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 39837687 - 39837521
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg-aaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||| || ||| | | ||||||||||||||| |||||||    
T  39837687 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattgac 39837588  T
Q  99 cctaaatcacccctctgacaagaaga---agaaatgggtgacgactagggtttaagaaggagagaag 162  Q
     ||||||||||||||||| |||||||   ||||| ||||||||||||| |||| |||||||||||||    
T  39837587 gctaaatcacccctctgaaaagaagaagaagaaaagggtgacgactagtgtttgagaaggagagaag 39837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 394304 - 394462
Alignment:
Q  2 aaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    |||||||||||||||| ||||||  ||||||||||||||||| | |||||||||||||||||| || ||||| | ||||||||||||||| |||||||||    
T  394304 aaacaaacgaaagaaagcagaaaagatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccc 394403  T
Q  101 taaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||   ||| ||||||||| ||||||| |||||||||| |||| ||||||||    
T  394404 taaatcacccctc---caaaaagaagaaaagggtgacaactagggtttgagaaagagagaag 394462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7060416 - 7060273
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| || ||||| | ||||||||||||| | ||||||||    
T  7060416 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggttaaaattgacc 7060317  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactag 143  Q
    |||||| |||||||||| |||||||| |||  ||||||||||||    
T  7060316 ctaaattacccctctgaaaagaagaaaaaaaaggtgacgactag 7060273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 24611832 - 24611990
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaa 103  Q
    ||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||| ||||| |||  || | ||||||||||||||  |||||||| |||    
T  24611832 caaacgaaaaaaaatagaaaatatgtgaaatcacttattcaattaggatagaagggaaaatgacttagaggggtgatttttgggtctaaattgaccataa 24611931  T
Q  104 atcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||| | |||||||||||||| | |||||||| |||||||||||||||||||    
T  24611932 atcacccctctaagaagaagaagaaatgagcgacgactaaggtttaagaaggagagaag 24611990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31522074 - 31521910
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||||| || ||||| | ||||||||| ||||| ||||||||    
T  31522074 aaaacaaactaaagaaaacaaagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgacc 31521975  T
Q  100 ctaaatcacccctctgacaagaag---aagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    ||||||||||||| ||| ||||||   |||||| |||  ||||||||||||| ||||||||||||    
T  31521974 ctaaatcacccctttgaaaagaagaacaagaaaagggccacgactagggtttgagaaggagagaa 31521910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43244410 - 43244575
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||||||| || || || | ||||||||||||||| ||||||||    
T  43244410 aaaacaaacgaaagaaaatcgaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgacc 43244509  T
Q  100 ctaaatcacccctct---gacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||||    | |||||||||||| || ||||| ||||||||| |||| ||||||||    
T  43244510 ctaaatcacccctctaaaaaaaagaagaagaaaaggatgacggctagggtttgagaaagagagaag 43244575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26742492 - 26742660
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| || ||||||| ||||||||||||||| |||||| |    
T  26742492 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttttgggtcaaaattgatc 26742591  T
Q  100 ctaaatcacccctctgacaag------aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||| ||| | |||      ||||||||| |||||||  |||||||||| ||||||||||||    
T  26742592 ctaaatcacccatctaaaaagaagaaaaagaagaaaggggtgactgctagggtttaggaaggagagaag 26742660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6911772 - 6911644
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || |||||   ||||||||||| ||| ||||||||    
T  6911772 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatttttggatcaaaattgacc 6911673  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| |||||||||||||    
T  6911672 ctaaatcacccctctaacaagaagaagaa 6911644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 30202130 - 30202002
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| |||| | | | ||||||||||| ||| ||||||||    
T  30202130 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagataaaaggaaaaacaactagaaggggtgatttttggatcaaaattgacc 30202031  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||||||||||||||||||||||||    
T  30202030 ttaaatcacccctctgacaagaagaagaa 30202002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 7083845 - 7084005
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||| || ||  | | ||||||||||| ||| ||||||||    
T  7083845 aaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaattcataggggtgatttttggatcaaaattgacc 7083944  T
Q  100 ctaaatcacccctctgacaagaagaaga--aatgggtgacgactagggtttaagaaggaga 158  Q
    |||||| | || ||||| ||||||||||  || |||||||||||||||||| |||||||||    
T  7083945 ctaaattatccatctgaaaagaagaagaagaaagggtgacgactagggtttgagaaggaga 7084005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27394922 - 27394794
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| ||| | |||| ||||||||| |||||||||||||||||||||  |||| | ||||||||||||||| ||||||||    
T  27394922 aaaacaaacgaaagaaaacataaaatattttaaattacttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgacc 27394823  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||| ||| |||||||||||    
T  27394822 ctaaatcacccctgtgaaaagaagaagaa 27394794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19745481 - 19745369
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||| ||||| || |||||||| |||||||||||||| |||||| |    
T  19745481 aaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatc 19745382  T
Q  100 ctaaatcacccct 112  Q
    |||||||||||||    
T  19745381 ctaaatcacccct 19745369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19794325 - 19794437
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||| ||||| || |||||||| |||||||||||||| |||||| |    
T  19794325 aaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatc 19794424  T
Q  100 ctaaatcacccct 112  Q
    |||||||||||||    
T  19794425 ctaaatcacccct 19794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 626578 - 626703
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||| |||||||| || |||| ||||||||||||||| ||||  ||    
T  626578 aaaacaaacgaaagaaaacagaaaatatgtgaa-tcacttattcaattatgatagaag-aaaaataattcagatgggtgatttttgggtcaaaattagcc 626675  T
Q  100 ctaaatcacccctctgacaagaagaaga 127  Q
    ||||||||||||||||| ||||||||||    
T  626676 ctaaatcacccctctgaaaagaagaaga 626703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13965652 - 13965545
Alignment:
Q  1 aaaacaaacgaaagaaaacaga-aatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| || ||| | | ||||||||||||||| ||||||||    
T  13965652 aaaacaaacgaaagaaaacatagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgacc 13965553  T
Q  100 ctaaatca 107  Q
    ||||||||    
T  13965552 ctaaatca 13965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 7861235 - 7861368
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| |||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||| || ||   ||||||||||||||| ||||||      
T  7861235 aaaacaaatgaaa-aaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataattcagagtggtgatttttgggtcaaaattgatt 7861333  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggt 134  Q
    ||||||||||| |||||||||||||||||| ||||    
T  7861334 ctaaatcacccatctgacaagaagaagaaaggggt 7861368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 24100233 - 24100117
Alignment:
Q  1 aaaacaaacgaaagaaaacaga---aatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    ||||||||||||||||||||||   |||||||||||||||||||||| ||| |||||||||||||| || ||||||| || |||||||| ||| ||||||    
T  24100233 aaaacaaacgaaagaaaacagagaaaatatgtgaaatcacttattcaattacgatagaaggaaaaacaattcggatgggtaatttttggttcaaaattga 24100134  T
Q  98 ccctaaatcacccctct 114  Q
     ||||||||||||||||    
T  24100133 tcctaaatcacccctct 24100117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8712622 - 8712454
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||  ||||||||||||||||| || |  || | ||||||||||||||| ||||||||    
T  8712622 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttactcaactaggatagaaggaaaaacaattatgaggggtgatttttgggtcaaaattgacc 8712523  T
Q  100 ctaaatcacccctctgacaagaaga------agaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||| | | |||||||      ||||| |||||||| |||||||||  ||||||||||||    
T  8712522 ctaaatcacccctgtaaaaagaagaagaagaagaaaagggtgacggctagggtttgggaaggagagaag 8712454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20399932 - 20400100
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||  || |||| || ||||||||||||||| ||||||||    
T  20399932 aaaataaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaagaaaaagcaattcgggtgggtgatttttgggtcaaaattgacc 20400031  T
Q  100 ctaaatcacccctctgacaagaagaag------aaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||| ||| ||| | |||||||||      |||  |||||| |||||||||| |||||||||||||    
T  20400032 ctaaatcgcccttctaaaaagaagaagaagaaaaaaaaggtgacaactagggtttgagaaggagagaag 20400100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25658259 - 25658091
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||| ||||||||||||||||| |||||||||||||||||| | |||||| ||||||||||| || | |||   |||||||||| |||| |||| |||    
T  25658259 aaaacatacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggaaagaaggaaaaacaatttggagaggtgatttttgagtcaaaattaacc 25658160  T
Q  100 ctaaatcacccctctgacaagaaga------agaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||| | |||||||      ||||| |||||||| ||||||||| |||||||||||||    
T  25658159 ctaaatcacccctctaaaaagaagaagaagaagaaaagggtgacggctagggtttgagaaggagagaag 25658091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51152217 - 51152105
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||| || ||||| | |||||||||||||||  |||||||    
T  51152217 aaaacaaacgaaagaaagcagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaatattgacc 51152118  T
Q  100 ctaaatcacccct 112  Q
     ||||||||||||    
T  51152117 ntaaatcacccct 51152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11210342 - 11210470
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||| ||| | ||||||||||| ||||| | ||||||||| || || ||||||||    
T  11210342 aaaacaaacgaaagaaaagagtaaatatgtgaaatcacttattcaattatgatgggaggaaaaataattcggaggggtgatttttagggcaaaattgacc 11210441  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||   |||||||||||    
T  11210442 ctaaatcacccctctacaaagaagaagaa 11210470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26674464 - 26674336
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||  || | ||| | ||||||||| ||||| |||||| |    
T  26674464 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattatgatagaaggaaaagcaatttggaggggtgatttttaggtcaaaattgatc 26674365  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||| ||||| |||||||||||    
T  26674364 ctaaatcacccatctgaaaagaagaagaa 26674336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29922929 - 29922762
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataac---tcggatgagtgatttttgggtcagaattg 96  Q
    |||||| ||||||| ||| ||||| |||||||||||||||||||| ||||||||||| |||||| |||   | ||| | |||||| || ||||| |||||    
T  29922929 aaaacagacgaaaggaaatagaaaatatgtgaaatcacttattcaattaggatagaaagaaaaaaaacaacttggaggggtgattattaggtcaaaattg 29922830  T
Q  97 accctaaatcacccctctgacaagaaga---agaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    ||||||||||||| ||||||||||||||   ||||| |||||||| ||||||||| ||||| ||||||    
T  29922829 accctaaatcacctctctgacaagaagaagaagaaaggggtgacggctagggtttgagaagaagagaa 29922762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6882048 - 6881958
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtca 90  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| | | |||||||||||||||    
T  6882048 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataactcgaaggggtgatttttgggtca 6881958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 5814439 - 5814311
Alignment:
Q  1 aaaacaaacgaaagaaaac-agaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||| ||| ||||||||| |||| |||| ||| |  |||||||||| ||| ||||||||    
T  5814439 aaaacaaacgaaagaaaactaaaaatatgtgaaataacttattcaattaagatagaagggaaaacaacttggagggatgatttttggatcaaaattgacc 5814340  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||| | || |||||||||||||    
T  5814339 ctaaatcacctccctaacaagaagaagaa 5814311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38944177 - 38944278
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||| || | ||| | |||||||||||| || |||||||||    
T  38944177 aaaacaaacgaaagaaaacaaaaatatgtgaaatcacttattcaactacgatagaaggaaaaacaatttggaggggtgatttttgggccaaaattgaccc 38944276  T
Q  101 ta 102  Q
    ||    
T  38944277 ta 38944278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 20887785 - 20887889
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||| | ||| |||||||  || ||||| ||||||| ||||||||||||||| ||||||||     
T  20887785 aaaacaaacgaaagaaagcagaaaaatgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtgatttttgggtcaaaattgacct 20887884  T
Q  101 taaat 105  Q
    |||||    
T  20887885 taaat 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 7084276 - 7084170
Alignment:
Q  22 aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaaga 121  Q
    ||||||||| ||||||||||||| ||| | |||||||||||| || ||||| |  | |||||||||||| |||||| ||||||||||||||||||||| |    
T  7084276 aaatatgtgcaatcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctctgacaaca 7084177  T
Q  122 agaagaa 128  Q
    |||||||    
T  7084176 agaagaa 7084170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 50801309 - 50801225
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgattttt 84  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||| |||| ||||||    
T  50801309 aaaataaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcggaggagttattttt 50801225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 36124378 - 36124471
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaatt 95  Q
    |||||||||||||||||||| ||||||||||||||| | ||||| ||| ||||| |||||||| || | ||||||||||||||||| ||| ||||    
T  36124378 aaaacaaacgaaagaaaaca-aaatatgtgaaatcaatcattcaattaagataggaggaaaaacaattgggatgagtgatttttggatcaaaatt 36124471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39523501 - 39523396
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||| |         | |||||||||||||| |||||||     
T  39523501 aaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaattaggataaaaggaaaaaca---------attgatttttgggtcaaaattgact 39523411  T
Q  100 ctaaatcacccctct 114  Q
    |||||||||||||||    
T  39523410 ctaaatcacccctct 39523396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 42197622 - 42197517
Alignment:
Q  22 aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaaga 121  Q
    ||||| ||||| ||||||||| | ||||||||||||||||||||| |||||  ||||||||||  |||| |||| |||||||||||||||| ||| ||||    
T  42197622 aaatacgtgaagtcacttattaaattaggatagaaggaaaaataattcgga-aagtgatttttttgtcaaaattaaccctaaatcacccctatgaaaaga 42197524  T
Q  122 agaagaa 128  Q
    | |||||    
T  42197523 ataagaa 42197517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3159135 - 3159021
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaa-tcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||||||| | |||| ||||||||| ||||||||| | ||| |||||||||||||| ||||||||  ||||| |||||||| | | |||||    
T  3159135 aaaacaaacgaaagaaagctgaaaatatgtgaaaatcacttatttaattatgatagaaggaaaaacaactcggaatagtga-ttttgggtaaaagttgac 3159037  T
Q  99 cctaaatcacccctct 114  Q
    ||||||||| ||||||    
T  3159036 cctaaatcatccctct 3159021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22049433 - 22049543
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    |||| ||| |||||||||| |||| |||||| |||||||||||||| |||||||||||||||||| || ||| | | |||| |||||||||| |||| ||    
T  22049433 aaaataaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaaggaaaaacaattcgaaagggtga-ttttgggtcaaaattaac 22049531  T
Q  99 cctaaatcaccc 110  Q
    ||||||||||||    
T  22049532 cctaaatcaccc 22049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12717146 - 12717255
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||||||||| |||| |||||| |||||||||||| | |||||||||||| ||||| || ||||| |  ||| |||||||||| |||||||    
T  12717146 aaaacaaacgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatagaagaaaaaacaagtcggacggatga-ttttgggtcaaaattgac 12717244  T
Q  99 cctaaatcacc 109  Q
     ||||||||||    
T  12717245 tctaaatcacc 12717255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45351099 - 45351205
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattc-agttaggatagaagg-aaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| | |||| ||| |||| ||||| || ||||| | ||||||||||| ||| ||||||    
T  45351099 aaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattga 45351198  T
Q  98 ccctaaa 104  Q
    |||||||    
T  45351199 ccctaaa 45351205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45360578 - 45360684
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattc-agttaggatagaagg-aaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| | |||| ||| |||| ||||| || ||||| | ||||||||||| ||| ||||||    
T  45360578 aaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattga 45360677  T
Q  98 ccctaaa 104  Q
    |||||||    
T  45360678 ccctaaa 45360684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8517485 - 8517545
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaa 60  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  8517485 aaaacaaacgaaagaaaacagaaaatatgtaaaatcacttattcaattagaatagaaggaa 8517545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 28837121 - 28837005
Alignment:
Q  46 ttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaaga--aatgggtgacgactag 143  Q
    |||||||||||||||||| ||  |||||| ||||||||| ||||| |||||| ||||||| ||| |||| |||| |||||||  || ||||||  | | |    
T  28837121 ttaggatagaaggaaaaacaa--cggatgggtgattttttggtcaaaattgatcctaaattacctctctcacaaaaagaagaagaaagggtgagaagtgg 28837024  T
Q  144 ggtttaagaaggagagaag 162  Q
    ||||| |||||||||||||    
T  28837023 ggtttgagaaggagagaag 28837005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43493316 - 43493388
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    |||| |||| |||||||||| ||| |||||||||||||||||||| ||| |||||||||||||| || |||||    
T  43493316 aaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgga 43493388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2447892 - 2447809
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttt 83  Q
    ||||||||| || ||||||| |||| ||||||||||||||||||| |||||||||||  |||||||| ||| | | ||||||||    
T  2447892 aaaacaaactaatgaaaacataaattatgtgaaatcacttattcaattaggatagaaaaaaaaataattcgaaggggtgatttt 2447809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 20887918 - 20887962
Alignment:
Q  118 aagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||    
T  20887918 aagaagaagaaaagggtgacggctagggttttagaaggagagaag 20887962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13586269 - 13586432
Alignment:
Q  1 aaaacaaacgaaagaaaa-cagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||| ||| |||| ||| ||||| || | |||      ||||||| |||| |||||||    
T  13586269 aaaacaaacgaaaaaaaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttgga------atttttgagtcaaaattgac 13586362  T
Q  99 cctaaatcacccctctg------acaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    | |||||| |||  |||      | |||||||||||| || ||||||||||| ||| |||||||||||||    
T  13586363 cataaatcgccctgctgaaaagaagaagaagaagaaaaggatgacgactaggatttgagaaggagagaag 13586432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 46717007 - 46717077
Alignment:
Q  92 aattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||||||| || ||  | ||||||||| | |||||||||||  ||| |||||||||||||    
T  46717007 aattgaccctaaatcacccatccgatgaaaagaagaaaggagtgacgactagaatttgagaaggagagaag 46717077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 43493417 - 43493458
Alignment:
Q  121 aagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||||||| || |||||| |||||||||||||    
T  43493417 aagaagaaatgggtgacggctggggtttgagaaggagagaag 43493458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 42972069 - 42971990
Alignment:
Q  71 gatgagtgatttttgggtcagaa-ttgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaa 150  Q
    ||||||||||||| |||||| || ||||||||||||||||| || ||| | || |||||| | |||||| |||||||||||    
T  42972069 gatgagtgatttt-gggtcaaaaattgaccctaaatcacccttccgacgaaaacaagaaaggagtgacggctagggtttaa 42971990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 35176 - 35046
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa---tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattga 97  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  35176 aaaacaaacgaaagaaaacagaaaatatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggatgggtgatttttgggtcaaaattga 35077  T
Q  98 ccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||| || |||||| ||||||||    
T  35076 ccctaaatcacctctttgacaaaaagaagaa 35046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 9e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 1810257 - 1810414
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaata-tgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||| |||||| | |||||||||||||||| | |||||||||||| ||||| || ||||| | ||||||||||||||| ||||||||    
T  1810257 aaaacaaacgaaagaaatcagaaaaaatgtgaaatcacttattgaattaggatagaagaaaaaaaaa-tcggaggggtgatttttgggtcaaaattgacc 1810355  T
Q  100 ctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||  ||||||||    
T  1810356 ctaaatcacccctctaaaaagaagaagaaaagggtgacgactagggtttgggaaggaga 1810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30026917 - 30027039
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||| |||||||||| ||||||||||||||| || |||||    
T  30026917 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaagaaaaaacaactcggatgggtgatttttgggtcaaaaatgacc 30027016  T
Q  100 ctaaatcacccctctgacaagaa 122  Q
    |||||||||||||||||||||||    
T  30027017 ctaaatcacccctctgacaagaa 30027039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 14600735 - 14600863
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||  |||||||||||||| ||||||||    
T  14600735 aaaacaaacgaaagaaaacagaaaatatgtgaaatcagttattcaattaggatagaagaaaaaacaactcggatggatgatttttgggtcaaaattgacc 14600834  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||| |||| ||||||| |||||    
T  14600835 ctaaatcacctctctaacaagaaaaagaa 14600863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37612745 - 37612616
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||  ||||||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  37612745 aaaacaaacgaaagaaaataaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgacc 37612646  T
Q  100 ctaaatcacccctctgacaagaagaagaaa 129  Q
    ||||||||||||||| | ||||||||||||    
T  37612645 ctaaatcacccctctaaaaagaagaagaaa 37612616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9501682 - 9501516
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagga-aaaataactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| || || |||| ||||||||||| ||| |||||||    
T  9501682 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaattcagatgggtgatttttggatcaaaattgac 9501583  T
Q  99 cctaaatcacccctct---gacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||| || |    | |||||||||||| || ||||| ||||||||| |||||||||||||    
T  9501582 cctaaatcaccactttaaaaagaagaagaagaaaaggatgacggctagggtttgagaaggagagaag 9501516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 39067726 - 39067854
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| || | |||  |||||||||||||||| ||||||||    
T  39067726 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgacc 39067825  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||| | |||||||||||    
T  39067826 ttaaatcacccctcttaaaagaagaagaa 39067854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41361824 - 41361696
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  41361824 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgacc 41361725  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||||||||  ||||||||||||||    
T  41361724 ataaatcaccccttcgacaagaagaagaa 41361696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24791205 - 24791370
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||| |||||||||||| | |||||||| ||||||||| || |||||||  |||||||||||||| ||||||||    
T  24791205 aaaacaaacgaaagaaaacagaaaatatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgacc 24791304  T
Q  100 ctaaatcacccctct---gacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
     ||||||||||||||    | |||||||||||| ||||||| |||||| ||| |||| ||||||||    
T  24791305 ataaatcacccctctaaaaagaagaagaagaaaagggtgacaactaggatttgagaatgagagaag 24791370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 10148039 - 10147910
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaat-aactcggatgagtgatttttgggtcagaattgac 98  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||||  |||||||| | |||||| |||||||| |||||||    
T  10148039 aaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaaacaactcggaggggtgattattgggtcaaaattgac 10147940  T
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||| ||| |||||||||    
T  10147939 cctaaatcacccctctaacatgaagaagaa 10147910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 23971132 - 23971259
Alignment:
Q  2 aaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||| |||| ||      
T  23971132 aaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcggatgagtgattttttggtcaaaatttactt 23971231  T
Q  101 taaatcacccctctgacaagaagaagaa 128  Q
    ||||||||| |||| ||||||| |||||    
T  23971232 taaatcacctctctaacaagaaaaagaa 23971259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 12329713 - 12329559
Alignment:
Q  6 aaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || ||| |   ||||||||||| ||| ||||||| |||||    
T  12329713 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgaaatggtgatttttggatcaaaattgactctaaa 12329614  T
Q  105 tcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||| ||||   | ||||||||||| ||||||  |||||||| |||||||||||||    
T  12329613 tcacccatctg---aaaagaagaaatgagtgacggttagggtttgagaaggagagaag 12329559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 24699920 - 24699794
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataa--ctcggatgagtgatttttgggtcagaattgaccct 101  Q
    |||| ||||||||||||||| |||||||||||||||||| | |||||||| ||| ||||| |   |||||||| ||||||||||||||| ||||||||||    
T  24699920 caaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatataagaaaaaaaacatctcggatgggtgatttttgggtcaaaattgaccct 24699821  T
Q  102 aaatcacccctctgacaagaagaagaa 128  Q
    ||||||||| |||||||||||||||||    
T  24699820 aaatcacccttctgacaagaagaagaa 24699794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2025246 - 2025374
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| |||||||| ||||||||||  ||||||||||||||||||| |||| ||| ||||||||| |||| ||| | ||||||||| ||||| ||||||||    
T  2025246 aaaataaacgaaataaaacagaaaacatgtgaaatcacttattcaattagaataaaaggaaaaacaacttggaagggtgattttttggtcaaaattgacc 2025345  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||||||| |||||||||||||    
T  2025346 ataaatcacccctctaacaagaagaagaa 2025374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10338859 - 10338986
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||| || ||||| | |||||||||| |||| ||||||||    
T  10338859 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgcgtcaaaattgacc 10338958  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     ||||||| |||||||| ||||| |||||    
T  10338959 ttaaatca-ccctctgaaaagaataagaa 10338986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11161974 - 11161846
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||| |||||||| || |||||| |||| | | | ||||||||||||||| ||||||||    
T  11161974 aaaacaaacgaaagaaaactgaaaagatgtgaaatgacttattcaattaggatataaagaaaaacaacttgaaggggtgatttttgggtcaaaattgacc 11161875  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||| |||||||| |||||||||||||    
T  11161874 ctaaattacccctctaacaagaagaagaa 11161846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31308240 - 31308106
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga---tga---gtgatttttgggtcagaa 93  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||||    ||   ||||||||| | ||| ||    
T  31308240 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggagtcggagaggtgatttttagatcaaaa 31308141  T
Q  94 ttgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||| |||||||||||||| |||||||||||||    
T  31308140 ttgaccttaaatcacccctctaacaagaagaagaa 31308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 31407785 - 31407913
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgag-tgatttttgggtcagaattgac 98  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||  || |||||||||||||| || ||||| ||| |||||||||||||| |||||||    
T  31407785 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcatttattcaactatgatagaaggaaaaacaattcgga-gagatgatttttgggtcaaaattgac 31407883  T
Q  99 cctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||| | || ||||||||    
T  31407884 cctaaatcacccctctaaaaataagaagaa 31407913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31202550 - 31202422
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |||  |||||| |||||| || | |||||  |||||||||||||| ||||||||    
T  31202550 aaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgacc 31202451  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||||| ||| | |||||||||||    
T  31202450 ttaaatcacccatctaaaaagaagaagaa 31202422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 7583851 - 7583929
Alignment:
Q  50 gatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||| ||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  7583851 gataaaaggaaaaacaactcggatgggtgatttttgggtcaaaattgatcctaaatcacccctctgacaagaagaagaa 7583929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 13570763 - 13570885
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||| ||||| |||||||||||||||||| | ||||||||||| |||||| || | |||||| |||||||| | ||| |||||||     
T  13570763 aaaacaaacgaaaaaaaatagaaaatatgtgaaatcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatcaaaattgact 13570862  T
Q  100 ctaaatcacccctctgacaagaa 122  Q
    ||||||||||||||||| |||||    
T  13570863 ctaaatcacccctctgaaaagaa 13570885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2234507 - 2234635
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| || ||| | | ||||||||||| ||| |||| |||    
T  2234507 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgaaggggtgatttttggatcaaaattaacc 2234606  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||| ||||||| | | | |||||||||||    
T  2234607 ctagatcacccttttaaaaagaagaagaa 2234635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 10334244 - 10334137
Alignment:
Q  22 aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaaga 121  Q
    |||||| |||| ||||||||| | |||||||||||||||||| |||||  ||||||||||||||| ||| |||||||||||||||| | |||| ||||||    
T  10334244 aaatatatgaactcacttatttaattaggatagaaggaaaaacaactcatatgagtgatttttggatcaaaattgaccctaaatcatctctctaacaaga 10334145  T
Q  122 agaagaaa 129  Q
    ||| ||||    
T  10334144 agaggaaa 10334137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1039930 - 1040057
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| |||||||| |||||| |||||||||||||||||| | |||| ||||||||||||  || ||||||| ||||||||||| ||| ||||||||    
T  1039930 aaaacaaatgaaagaaagcagaaaatatgtgaaatcacttattgaattagaatagaaggaaaaccaattcggatgggtgatttttggatcaaaattgacc 1040029  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
     |||||||  ||||| | |||||||||||    
T  1040030 ttaaatca-tcctctaaaaagaagaagaa 1040057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 3204794 - 3204899
Alignment:
Q  2 aaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccc 100  Q
    |||||||||||||||||||| ||||||||||||||||| ||| | |||| ||||| ||||||| || ||||| | || |||||||||||| ||||||| |    
T  3204794 aaacaaacgaaagaaaacagaaaatatgtgaaatcactcattaaattagaatagatggaaaaacaattcgga-gggtaatttttgggtcaaaattgactc 3204892  T
Q  101 taaatca 107  Q
    |||||||    
T  3204893 taaatca 3204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37128523 - 37128597
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatg 74  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| || |||||||    
T  37128523 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggatg 37128597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30039374 - 30039476
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaatatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||     ||||||| ||||||| |||||| |||| | ||||||||||| || |||||||||||| |||||||||| ||||||||    
T  30039374 aaaacaaacgaaagaaaa-----atatgtggaaatcacatattcaattagaaaagaaggaaaaacaattcggatgagtga-ttttgggtcaaaattgacc 30039467  T
Q  100 ctaaatcac 108  Q
     ||||||||    
T  30039468 ataaatcac 30039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 7281707 - 7281587
Alignment:
Q  30 gaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctct------gacaagaag 123  Q
    |||||||||||||||  ||| | |||| |||||| || ||||||| |||||||| || | ||||||||||||||||||  | |||      |||||||||    
T  7281707 gaaatcacttattcaactagaaaagaaagaaaaacaattcggatgggtgattttaggtt-agaattgaccctaaatcattcatcttcaatagacaagaag 7281609  T
Q  124 aagaaatgggtgacgactaggg 145  Q
    ||||||||||||||||||||||    
T  7281608 aagaaatgggtgacgactaggg 7281587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7579892 - 7579945
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggata 53  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  7579892 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagata 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22787584 - 22787528
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggatagaa 56  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||    
T  22787584 aaaacaaacgaaagaaaacagaaaatatgttaaatcacttattcaactaggatagaa 22787528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15288835 - 15288898
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggatagaaggaaaaa 63  Q
    ||||||||||||||||||||| ||||| |||||||||| |||| | ||||||||||| ||||||    
T  15288835 aaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaa 15288898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15469204 - 15469267
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcacttattcagttaggatagaaggaaaaa 63  Q
    ||||||||||||||||||||| ||||| |||||||||| |||| | ||||||||||| ||||||    
T  15469204 aaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaa 15469267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 41996567 - 41996508
Alignment:
Q  102 aaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaa 161  Q
    |||||||||||| ||| | ||||||||||| |||||| ||||| ||||||||||||||||    
T  41996567 aaatcacccctccgacgaaaagaagaaatgagtgacggctaggatttaagaaggagagaa 41996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 8054912 - 8054978
Alignment:
Q  92 aattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    ||||||||||||||||||||||  || | ||||||||| | |||||| ||||||||| |||||||||    
T  8054912 aattgaccctaaatcacccctccaacgaaaagaagaaaggagtgacggctagggtttgagaaggaga 8054978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4757257 - 4757188
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactc 69  Q
    |||| ||| ||||||||||||||| |||||||||||| ||||| | ||| |||||||||||||| |||||    
T  4757257 aaaagaaatgaaagaaaacagaaaatatgtgaaatcatttatttaattatgatagaaggaaaaacaactc 4757188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 13576259 - 13576378
Alignment:
Q  46 ttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctct------gacaagaagaagaaatgggtgacga 139  Q
    ||||||||||| |||||| |||||||| |  ||||||| || ||| |||||| ||||||||||||||||      ||||||||||||||| ||  |||||    
T  13576259 ttaggatagaaagaaaaacaactcggagggatgattttagg-tcaaaattgatcctaaatcacccctcttcgttagacaagaagaagaaagggccgacga 13576357  T
Q  140 ctagggtttaagaaggagaga 160  Q
    |||  |||| |||||||||||    
T  13576358 ctaaagtttgagaaggagaga 13576378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 30027046 - 30027079
Alignment:
Q  95 tgaccctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||||||||||||||||||||||    
T  30027046 tgaccctaaatcacccctctgacaagaagaagaa 30027079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2968624 - 2968513
Alignment:
Q  1 aaaacaaacgaaagaaaac-agaaatatgtg-aaatcacttattcagttaggatagaaggaaaaataactcggatgagtgat--ttttgggtcagaattg 96  Q
    ||||||||||||||||||| | ||||||||| |||||||||||| | |||| ||| || |||||| |||||||| ||| | |  ||||| |||| |||||    
T  2968624 aaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagaatataaagaaaaacaactcggaggagaggtgattttgagtcaaaattg 2968525  T
Q  97 accctaaatcac 108  Q
    ||| ||||||||    
T  2968524 accataaatcac 2968513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 39067874 - 39067918
Alignment:
Q  118 aagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||| |||||||| ||||||||| ||||| |||||||    
T  39067874 aagaagaagaaaagggtgacggctagggtttgagaagaagagaag 39067918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6419887 - 6420055
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||| || | ||||||||||| ||| ||||||||    
T  6419887 aaaacaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcagaggggtgatttttggatcaaaattgacc 6419986  T
Q  100 ctaaatcacccctctgac------aagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||||||||||||||||||      |||||||||||  |||||||| ||||||||| |||||||||||||    
T  6419987 ctaaatcacccctctgacaagaagaagaagaagaagggggtgacggctagggtttgagaaggagagaag 6420055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 8693686 - 8693854
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttagga---tagaaggaaaaataactcggatgagtgatttttgggtcagaattg 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||   |||||||||||| || ||||||| ||||||||||||||| |||||    
T  8693686 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattg 8693785  T
Q  97 accctaaatcacccctct---gacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    ||| ||||||||||||||    | |||||||||||| |||||||| |||| |||| |||||||||||||    
T  8693786 accttaaatcacccctctaaaaagaagaagaagaaaagggtgacggctagagtttgagaaggagagaag 8693854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 12481399 - 12481527
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||| || ||||| | ||||||||||||||| |||||| |    
T  12481399 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgatc 12481498  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||||||||||||||||||||||    
T  12481499 ctaaatcacccctctgacaagaagaagaa 12481527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23654342 - 23654214
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  23654342 aaaacaaacgaaataaaacaaaaaatatgtgaaatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgatttttgggtcaaaattgacc 23654243  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||||| ||||||||||||||||||    
T  23654242 ctaaatcacctctctgacaagaagaagaa 23654214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 15590112 - 15590269
Alignment:
Q  5 caaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| || || || | ||||||||||||||| ||||||||||||    
T  15590112 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaa 15590211  T
Q  104 atcacccctctgacaaga---agaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    ||||||||||||| ||||   ||||||||  ||| ||||||||||||| |||||||||    
T  15590212 atcacccctctgaaaagaagaagaagaaaatggtaacgactagggtttgagaaggaga 15590269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21507837 - 21507965
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| || | ||| | ||||| ||||||||| ||||||||    
T  21507837 aaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggaggggtgatgtttgggtcaaaattgacc 21507936  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| | |||||||||||    
T  21507937 ctaaatcacccctctaaaaagaagaagaa 21507965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2304839 - 2304967
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||| |||| ||||| || |  |||||||||||||| ||| || |    
T  2304839 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgacagaagggaaaacaactcagagggttgatttttgggtcaaaatcgatc 2304938  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| ||||||| |||||    
T  2304939 ctaaatcacccctctaacaagaaaaagaa 2304967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14783200 - 14783314
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| || ||||| | ||||||||||||||| ||||||||    
T  14783200 aaaagaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggcgtgatttttgggtcaaaattgacc 14783299  T
Q  100 ctaaatcacccctct 114  Q
    |||||||| ||||||    
T  14783300 ctaaatcagccctct 14783314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 29927447 - 29927536
Alignment:
Q  39 tattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctctgacaagaagaagaa 128  Q
    |||||| |||||||||||||||||| |||| ||| ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  29927447 tattcaattaggatagaaggaaaaacaacttggaggagtgatttttgggtcaaaattgaccataaatcactcatctgacaagaagaagaa 29927536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 19402837 - 19402965
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||| |||| ||||||||| |||||  | | ||||||||||| ||| || |||||    
T  19402837 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgatttttggatcaaaagtgacc 19402936  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    | |||||||||||| |||||  |||||||    
T  19402937 cgaaatcacccctcagacaaagagaagaa 19402965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31937449 - 31937563
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||| |||||| || ||||| | ||||||||||||||| || |||||    
T  31937449 aaaacaaacgaaa-aaatcagaaaatatgtgaaatcacttattcaattaggatagaa-gaaaaacaattcggaggggtgatttttgggtcaaaactgacc 31937546  T
Q  100 ctaaatcacccctctga 116  Q
    ||||||||||| |||||    
T  31937547 ctaaatcacccttctga 31937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35219933 - 35220060
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||  || ||||||||||||||  |||| ||| | |||||||||| |||| ||||||||    
T  35219933 aaaacaaacaaaagaaaacagaaaatatgtgatatcacttattcgattcggatagaaggaaaac-aacttggaggggtgatttttgagtcaaaattgacc 35220031  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||  | |||||||||||    
T  35220032 ctaaatcacccctccaagaagaagaagaa 35220060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4921910 - 4922039
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaata--actcggatgagtgatttttgggtcagaattga 97  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||| ||| |||||||||||||| |  ||| ||| | || |||||||||||| ||||||    
T  4921910 aaaacaaacgaaataaaactgaaaatatgtgaaatcacttattcaattaagatagaaggaaaaaaactactgggaggggt-atttttgggtcaaaattga 4922008  T
Q  98 ccctaaatcacccctctgacaagaagaagaa 128  Q
    ||||||||||||||| | || ||||||||||    
T  4922009 ccctaaatcacccctttaacgagaagaagaa 4922039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6296278 - 6296409
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg-aaaaataactcggatgagtga--tttttgggtcagaattg 96  Q
    |||||||||||||||||  ||||| ||||||||| |||||||||| ||||| ||||||| ||||| || ||||| || |||  ||||| ||||| ||||     
T  6296278 aaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaatta 6296377  T
Q  97 accctaaatcacccctctgacaagaagaagaa 128  Q
    || ||||||||||||||| | |||||||||||    
T  6296378 actctaaatcacccctctaaaaagaagaagaa 6296409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6303088 - 6303219
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaagg-aaaaataactcggatgagtga--tttttgggtcagaattg 96  Q
    |||||||||||||||||  ||||| ||||||||| |||||||||| ||||| ||||||| ||||| || ||||| || |||  ||||| ||||| ||||     
T  6303088 aaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaatta 6303187  T
Q  97 accctaaatcacccctctgacaagaagaagaa 128  Q
    || ||||||||||||||| | |||||||||||    
T  6303188 actctaaatcacccctctaaaaagaagaagaa 6303219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 4085060 - 4084944
Alignment:
Q  50 gatagaaggaaaaataactcggatgagtgatttttgggtcagaattgaccctaaatcacccctct---gacaagaagaagaaa-tgggtgacgactaggg 145  Q
    |||||||||||||| || ||||| |  |||||||| ||||| |||||||||||||||||||||||    | ||||| |||||| |||||||| |||||||    
T  4085060 gatagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctctcagaaaaagaaaaagaaagtgggtgacaactaggg 4084961  T
Q  146 tttaagaaggagagaag 162  Q
    ||| ||||| |||||||    
T  4084960 tttgagaagcagagaag 4084944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4393862 - 4393777
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttg 85  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||  ||||||||||||| |||| ||||| || | ||||||||||    
T  4393862 aaaacaaacgaaagaaaaaagaaaatatgtgaaatcacttgttctattaggatagaaggtaaaacaactcagaggggtgatttttg 4393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 23638150 - 23638219
Alignment:
Q  4 acaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcgga 72  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||   ||||||||||||  |||||||    
T  23638150 acaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattattgtagaaggaaaaacgactcgga 23638219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 19759798 - 19759728
Alignment:
Q  92 aattgaccctaaatcacccctctgacaagaagaagaaatgggtgacgactagggtttaagaaggagagaag 162  Q
    |||||||||||||||||||||| ||| | ||||||||| | |||||| | || |||| |||||||||||||    
T  19759798 aattgaccctaaatcacccctccgacgaaaagaagaaaggagtgacggcaagagtttgagaaggagagaag 19759728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 31937563 - 31937615
Alignment:
Q  3 aacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggataga 55  Q
    ||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||    
T  31937563 aacaaacgaaa-aaaacagaaaatatgttaaatcacttattcaattaggataga 31937615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 1302699 - 1302659
Alignment:
Q  118 aagaagaagaaatgggtgacgactagggtttaagaaggaga 158  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  1302699 aagaagaagaaaggggtgacggctagggtttgagaaggaga 1302659  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29927123 - 29927163
Alignment:
Q  1 aaaacaaacgaaagaaaacag-aaatatgtgaaatcactta 40  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  29927123 aaaacaaacgaaagaaaacagaaaatttgtgaaatcactta 29927163  T

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Target: scaffold1379 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 1115 - 1240
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||| || ||| | | ||||||||||||||| ||||||||    
T  1115 aaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgacc 1214  T
Q  100 ctaaatcacccctctgacaagaagaa 125  Q
     ||||||||||||||||||| |||||    
T  1215 ttaaatcacccctctgacaaaaagaa 1240  T

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Target: scaffold1379; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 67 - 4
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaa 63  Q
    |||| |||| |||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||    
T  67 aaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaa 4  T

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Target: scaffold0432 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 2446 - 2603
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||||||| ||||| || | ||||||||||||||| || |||||    
T  2446 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcgattatgatagaaggaaaaacaactcaga-gggtgatttttgggtcaaaaatgacc 2544  T
Q  100 ctaaatcacccct-----ctgacaagaagaagaaatgggtgacgactagggtttaagaa 153  Q
    |||||||||||||      | | |||||||||||| |||||||||||||||||| ||||    
T  2545 ctaaatcacccctagaggataaaaagaagaagaaaagggtgacgactagggtttgagaa 2603  T

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Target: scaffold0001 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 404287 - 404414
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| | ||||||  | ||||||| ||||||||||| ||| ||||||||    
T  404287 aaaacaaacggaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaagaaaaactattcggatgggtgatttttggatcaaaattgacc 404386  T
Q  100 ctaaatcacccctctgacaagaagaaga 127  Q
     |||||| ||||||||| ||||||||||    
T  404387 ttaaatcgcccctctgaaaagaagaaga 404414  T

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Target: scaffold0294 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4096 - 4223
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||| |  |||||  | |||||||||||| |||| ||||||||    
T  4096 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttatttaattaggatagaaggaagac-aactcaaaggagtgatttttgtgtcaaaattgacc 4194  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||||| || |||||||||||||||||    
T  4195 ctaaatcagccttctgacaagaagaagaa 4223  T

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Target: scaffold0321 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7153 - 7243
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtca 90  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || ||||| | |||||||||||||||    
T  7153 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgggtca 7243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 1666 - 1539
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaa-tatgtgaaatcacttattcagttaggatagaaggaaaaataactcggatgagtgatttttgggtcagaattgacc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||| | |||||||||| | || || ||   ||||||||||||||| ||| || |    
T  1666 aaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattatggtagaaggaaaca-aaatcagagaggtgatttttgggtcaaaatggaac 1568  T
Q  100 ctaaatcacccctctgacaagaagaagaa 128  Q
    |||||| ||||||||||||| ||| ||||    
T  1567 ctaaattacccctctgacaacaagtagaa 1539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 13274 - 13400
Alignment:
Q  1 aaaacaaacgaaagaaaacagaaat-atgtgaaatcacttattcagttaggat----agaaggaaaaataactcggatgagtgatttttgggtcagaatt 95  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||| |||||||    | ||  ||||| || ||||| | ||||||||||| ||| ||||    
T  13274 aaaacaaacaaaagaaaacagaaaagatgtgaaatcacttattcaattaggataaaaaaaaaaaaaaacaattcggaggggtgatttttggatcaaaatt 13373  T
Q  96 gaccctaaatcacccctctgacaagaa 122  Q
    |||||||||||||| |||||| |||||    
T  13374 gaccctaaatcacctctctgaaaagaa 13400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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