View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8891_low_41 (Length: 251)

Name: NF8891_low_41
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8891_low_41
NF8891_low_41
[»] chr7 (31 HSPs)
chr7 (48-210)||(10619431-10619593)
chr7 (68-208)||(22786149-22786291)
chr7 (66-213)||(13919776-13919925)
chr7 (68-217)||(45909453-45909605)
chr7 (68-204)||(19494383-19494521)
chr7 (67-213)||(26703475-26703621)
chr7 (67-213)||(17354562-17354710)
chr7 (65-166)||(25428562-25428664)
chr7 (66-157)||(33008100-33008192)
chr7 (59-135)||(19840871-19840948)
chr7 (67-138)||(13919894-13919966)
chr7 (67-157)||(27888279-27888370)
chr7 (65-157)||(22189934-22190027)
chr7 (67-138)||(14759757-14759829)
chr7 (67-138)||(37549621-37549693)
chr7 (71-110)||(31959997-31960036)
chr7 (96-161)||(7775026-7775092)
chr7 (69-138)||(26703436-26703506)
chr7 (73-153)||(14759646-14759727)
chr7 (121-213)||(19840920-19841013)
chr7 (67-120)||(27888414-27888467)
chr7 (71-154)||(24539218-24539302)
chr7 (71-177)||(17749695-17749802)
chr7 (63-106)||(22190085-22190128)
chr7 (67-157)||(31502556-31502647)
chr7 (73-166)||(46067940-46068035)
chr7 (65-103)||(11824218-11824256)
chr7 (128-217)||(26189962-26190052)
chr7 (65-148)||(11824066-11824150)
chr7 (144-216)||(28232150-28232222)
chr7 (65-152)||(44511033-44511121)
[»] chr5 (29 HSPs)
chr5 (65-217)||(40971484-40971638)
chr5 (66-213)||(42224626-42224775)
chr5 (67-213)||(4959275-4959423)
chr5 (73-213)||(26072106-26072248)
chr5 (124-213)||(24915110-24915200)
chr5 (121-213)||(24990938-24991031)
chr5 (65-137)||(26072218-26072291)
chr5 (70-146)||(32050413-32050490)
chr5 (80-155)||(6263893-6263969)
chr5 (71-213)||(8912511-8912655)
chr5 (67-138)||(17568696-17568768)
chr5 (67-166)||(32401114-32401214)
chr5 (67-138)||(42224585-42224657)
chr5 (66-139)||(4959391-4959465)
chr5 (73-153)||(17568798-17568879)
chr5 (67-120)||(34368492-34368545)
chr5 (121-161)||(10253170-10253210)
chr5 (70-161)||(30325962-30326054)
chr5 (67-106)||(28611922-28611961)
chr5 (67-161)||(39246605-39246700)
chr5 (65-138)||(6263995-6264069)
chr5 (80-161)||(27592540-27592622)
chr5 (71-117)||(28611777-28611823)
chr5 (121-178)||(5413808-5413865)
chr5 (67-151)||(32309477-32309562)
chr5 (65-106)||(40926191-40926232)
chr5 (67-107)||(2443683-2443723)
chr5 (65-148)||(17537203-17537287)
chr5 (121-161)||(34384779-34384819)
[»] chr6 (13 HSPs)
chr6 (67-213)||(19090250-19090398)
chr6 (73-217)||(35128754-35128900)
chr6 (67-166)||(6531381-6531481)
chr6 (67-217)||(373396-373548)
chr6 (67-217)||(10060856-10061008)
chr6 (125-180)||(12794883-12794938)
chr6 (80-213)||(19737470-19737605)
chr6 (65-138)||(19090207-19090281)
chr6 (70-161)||(21987292-21987384)
chr6 (71-152)||(34905337-34905419)
chr6 (79-157)||(31116216-31116295)
chr6 (65-157)||(445813-445906)
chr6 (96-152)||(4595768-4595825)
[»] chr1 (34 HSPs)
chr1 (65-213)||(11135734-11135884)
chr1 (63-213)||(11430434-11430585)
chr1 (63-213)||(32848618-32848770)
chr1 (70-213)||(41917995-41918140)
chr1 (67-166)||(9165299-9165399)
chr1 (67-161)||(44739115-44739210)
chr1 (71-203)||(41095654-41095788)
chr1 (67-216)||(14094033-14094184)
chr1 (67-161)||(26980350-26980445)
chr1 (63-138)||(11135853-11135929)
chr1 (67-138)||(11430555-11430626)
chr1 (67-152)||(25543337-25543423)
chr1 (66-154)||(43851130-43851219)
chr1 (121-166)||(50308830-50308875)
chr1 (121-217)||(13388368-13388467)
chr1 (70-161)||(15523210-15523302)
chr1 (70-161)||(15531204-15531296)
chr1 (70-161)||(19101689-19101781)
chr1 (70-161)||(22540368-22540460)
chr1 (67-138)||(41095603-41095675)
chr1 (100-157)||(2225254-2225312)
chr1 (64-153)||(18157032-18157122)
chr1 (67-150)||(39019572-39019650)
chr1 (73-155)||(4578671-4578752)
chr1 (67-138)||(32848577-32848649)
chr1 (67-106)||(13889290-13889329)
chr1 (67-148)||(6133725-6133807)
chr1 (67-138)||(29418595-29418668)
chr1 (128-217)||(15660952-15661040)
chr1 (67-120)||(30678906-30678959)
chr1 (71-154)||(13114765-13114849)
chr1 (67-138)||(13388331-13388403)
chr1 (87-166)||(28109885-28109965)
chr1 (89-152)||(37553046-37553110)
[»] chr4 (28 HSPs)
chr4 (66-213)||(37315559-37315705)
chr4 (65-227)||(13069936-13070099)
chr4 (83-217)||(16178597-16178732)
chr4 (67-166)||(42862504-42862604)
chr4 (68-213)||(47237776-47237923)
chr4 (126-213)||(51206100-51206188)
chr4 (96-179)||(25719183-25719267)
chr4 (71-213)||(39016664-39016808)
chr4 (65-146)||(8108951-8109033)
chr4 (66-157)||(44832459-44832551)
chr4 (68-138)||(51206157-51206228)
chr4 (80-157)||(2187905-2187983)
chr4 (108-175)||(19447169-19447237)
chr4 (65-152)||(39471152-39471240)
chr4 (79-157)||(2088757-2088836)
chr4 (67-141)||(42862415-42862490)
chr4 (67-180)||(40812034-40812148)
chr4 (121-217)||(41278649-41278746)
chr4 (70-150)||(43771126-43771207)
chr4 (86-204)||(30866976-30867096)
chr4 (79-138)||(39016777-39016837)
chr4 (67-138)||(44832577-44832649)
chr4 (67-157)||(50571861-50571952)
chr4 (70-138)||(37315674-37315743)
chr4 (67-147)||(40991691-40991772)
chr4 (66-106)||(8109102-8109142)
chr4 (67-157)||(20225433-20225522)
chr4 (23-51)||(47152864-47152892)
[»] chr2 (29 HSPs)
chr2 (70-213)||(42182889-42183034)
chr2 (65-213)||(28898072-28898222)
chr2 (79-154)||(1107047-1107123)
chr2 (66-180)||(4964742-4964857)
chr2 (67-217)||(1110195-1110347)
chr2 (65-213)||(37228493-37228644)
chr2 (66-213)||(15508910-15509059)
chr2 (66-157)||(31395537-31395629)
chr2 (65-152)||(26767858-26767946)
chr2 (65-152)||(45554562-45554650)
chr2 (66-161)||(11539419-11539517)
chr2 (65-138)||(42183003-42183077)
chr2 (65-157)||(18511301-18511394)
chr2 (67-138)||(20951603-20951673)
chr2 (67-138)||(37228613-37228685)
chr2 (67-138)||(37719831-37719903)
chr2 (71-161)||(6980208-6980299)
chr2 (87-157)||(10339783-10339854)
chr2 (65-104)||(32856285-32856324)
chr2 (67-101)||(6315810-6315844)
chr2 (65-166)||(41546111-41546212)
chr2 (67-152)||(41805873-41805959)
chr2 (71-131)||(27968919-27968980)
chr2 (71-131)||(28091607-28091668)
chr2 (71-131)||(28101839-28101900)
chr2 (70-138)||(28898034-28898103)
chr2 (66-146)||(40535093-40535174)
chr2 (67-138)||(15509028-15509100)
chr2 (83-154)||(33747015-33747086)
[»] chr3 (28 HSPs)
chr3 (67-166)||(37600213-37600313)
chr3 (66-213)||(10769760-10769909)
chr3 (71-213)||(54140928-54141072)
chr3 (79-204)||(46237090-46237217)
chr3 (65-166)||(27243040-27243142)
chr3 (65-150)||(28529248-28529334)
chr3 (126-204)||(43657040-43657119)
chr3 (67-177)||(46575945-46576056)
chr3 (65-166)||(21232605-21232707)
chr3 (65-138)||(37600122-37600196)
chr3 (67-138)||(10769719-10769791)
chr3 (65-134)||(29775134-29775202)
chr3 (79-177)||(50661594-50661693)
chr3 (69-217)||(38928040-38928190)
chr3 (70-138)||(38928006-38928075)
chr3 (123-217)||(24748941-24749036)
chr3 (67-152)||(20493542-20493628)
chr3 (96-148)||(26310547-26310600)
chr3 (65-157)||(37776795-37776888)
chr3 (121-161)||(20791348-20791388)
chr3 (66-152)||(46450063-46450148)
chr3 (67-138)||(54140887-54140959)
chr3 (67-157)||(5452152-5452243)
chr3 (71-160)||(55283146-55283236)
chr3 (65-157)||(41451987-41452080)
chr3 (121-161)||(14236071-14236111)
chr3 (79-138)||(24748916-24748976)
chr3 (67-119)||(52951491-52951543)
[»] chr8 (20 HSPs)
chr8 (67-217)||(7599453-7599605)
chr8 (71-166)||(35689481-35689577)
chr8 (67-213)||(33417680-33417827)
chr8 (72-213)||(1205829-1205972)
chr8 (70-161)||(28413957-28414049)
chr8 (67-157)||(1977265-1977356)
chr8 (67-161)||(31301112-31301207)
chr8 (71-157)||(32072098-32072185)
chr8 (125-213)||(34303473-34303562)
chr8 (64-148)||(35151830-35151915)
chr8 (121-161)||(23685183-23685223)
chr8 (66-110)||(35689623-35689667)
chr8 (65-152)||(41727425-41727513)
chr8 (67-157)||(8914768-8914859)
chr8 (67-106)||(13407318-13407357)
chr8 (68-157)||(5979878-5979968)
chr8 (113-166)||(11310449-11310503)
chr8 (100-152)||(34861284-34861337)
chr8 (121-161)||(9952845-9952885)
chr8 (67-103)||(23142812-23142848)
[»] scaffold0099 (1 HSPs)
scaffold0099 (121-156)||(27365-27400)
[»] scaffold0155 (1 HSPs)
scaffold0155 (126-179)||(35651-35704)


Alignment Details
Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 10619593 - 10619431
Alignment:
Q  48 attgccctattagaatgatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatgtatgtcccacc 147  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |    
T  10619593 attgccctattagaatgatgaggaatgctagcaacactctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatatatatcccatc 10619494  T
Q  148 actttatgtgagtttcattgacaaaatgtaggttaacattgatttcacctaataaaagagtaa 210  Q
    |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  10619493 actttatgtgggttccattgacaaagtgtaagttaacattgatttcacctaataaaagagtaa 10619431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 22786149 - 22786291
Alignment:
Q  68 aggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    |||||||||| |||||||||||||||| |||||||||||||||  ||| | || || ||||||||||||||||||| |||||||||||||| ||| ||||    
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatt 22786248  T
Q  167 gacaaaatgtaggtta-acattgatttcacctaataaaagagt 208  Q
      |||| ||||||||| ||||||||||||||| ||||||||||    
T  22786249 tccaaagtgtaggttatacattgatttcacctgataaaagagt 22786291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 13919776 - 13919925
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttca 164  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||   |||  || ||||||||||||||||||||||||||||||||||||| ||| ||    
T  13919776 tgagaaatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 13919875  T
Q  165 ttgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    ||  |||| |||||||   |||||||||||||| |||||| |||| ||||    
T  13919876 ttttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagtg 13919925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 45909453 - 45909605
Alignment:
Q  68 aggaatgctaacaacactctcttttgatcactctctctagcacctactctcttt--tgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||||||||| ||||||| |||||||| ||||||| ||||||   ||||| |||  |||||||||||||||||||||||||||||||||||| ||| |||    
T  45909453 aggaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 45909552  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |  |||| |||||||   |||||||||| ||| ||||||||||| ||||||||    
T  45909553 ttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttag 45909605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 19494521 - 19494383
Alignment:
Q  68 aggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    |||||||||| || |||||||||||||  ||| ||||||| ||  ||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 19494422  T
Q  167 gacaaaatgtaggt-taacattgatttcacctaataaaa 204  Q
      |||| ||||| |   |||||||||||||| |||||||    
T  19494421 ttcaaagtgtagatcctacattgatttcacccaataaaa 19494383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 213
Target Start/End: Complemental strand, 26703621 - 26703475
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| |||||||||  ||||| || ||||||||||||  ||||| || |||||||||||||||||||||| |||||||||||||| ||| |||    
T  26703621 gaggaatgctagcaacactct--tttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccat 26703524  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |   ||| |||||||   ||||| |||||||| ||||||||||| ||||    
T  26703523 ttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtg 26703475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 213
Target Start/End: Complemental strand, 17354710 - 17354562
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| ||||||||| |||||| ||||||||||| |||  | ||| || |||| |||||||||||||||||||||||||||||||| |||  ||    
T  17354710 gaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctat 17354611  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |  |||| |||||||   |||||||||| ||| ||||||| ||| ||||    
T  17354610 ttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagtg 17354562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 25428664 - 25428562
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    |||| |||||||| |||||||||||||||| |||||| | ||| ||  ||||| || ||| ||||||||||||||||||||||||||||||||| ||| |    
T  25428664 atgatgaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttac 25428565  T
Q  164 att 166  Q
    |||    
T  25428564 att 25428562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 33008100 - 33008192
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||||||| |||||||| ||||||| |||| ||||||||||  ||||| || |||| |||||||| |||||||||||||||||| ||||    
T  33008100 tgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtg 33008192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 19840871 - 19840948
Alignment:
Q  59 agaatgatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaat 135  Q
    ||||| ||||||||||||| ||||||||| |||||| |||||||||||||||  ||||| || |||||||||||||||    
T  19840871 agaattatgaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 13919966 - 13919894
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactc-tcttttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  |||| | | ||||||||||||||||||    
T  13919966 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 13919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 27888279 - 27888370
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctct-tttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||| |||||||| ||||||| ||||||||||| |||  || ||||  |||| | ||||||||||||||||||||||||| ||||    
T  27888279 gaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtg 27888370  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 22189934 - 22190027
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||||||||  |||||||  |||| | |||||||||||||||  ||||| || |||| ||||||||||||||| ||||||||||| ||||    
T  22189934 atgaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtg 22190027  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 14759829 - 14759757
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||| ||||| || |||| |||||| ||||||    
T  14759829 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 14759757  T

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Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 37549621 - 37549693
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| |||| |||||||||| |||||| || |||| |||| ||||||||    
T  37549621 gaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 37549693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 31960036 - 31959997
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcac 110  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31960036 aatgctaacaacactctcttttgagcactctctctagcac 31959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 7775026 - 7775092
Alignment:
Q  96 cactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| ||||||  ||||| || |||| ||||||||||||||||||||||||||| ||||||||    
T  7775026 cactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagtt 7775092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 26703436 - 26703506
Alignment:
Q  69 ggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||| |||||||||||| ||| |||||||||||||||  ||||| || ||||||||||| ||||||    
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 14759646 - 14759727
Alignment:
Q  73 tgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttta 153  Q
    ||||||||||||  ||||||||  |||||| |||||||  ||||| || ||| ||||||||||| |||||||||||||||||    
T  14759646 tgctaacaacacaatcttttgagtactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccacttta 14759727  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 19841013 - 19840920
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||| |||||||||||||||||  ||||||||||||| ||| ||||  |||| |||||||   | |||||||||||| ||||||||||| ||||    
T  19841013 ttggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgtaggtcctatattgatttcacccaataaaagagtgagtg 19840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 27888467 - 27888414
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt 120  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||  ||||||||    
T  27888467 gaggaatgctagcaacactctcttttgagcactctctctaacactcactctctt 27888414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 24539302 - 24539218
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttat 154  Q
    ||||||| | |||||||||||||  ||||||||||| |||  ||||| || |||| | |||||||| ||||||||||||||||||    
T  24539302 aatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttat 24539218  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 17749695 - 17749802
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgac 169  Q
    ||||||| | ||||||| |||||  ||||||||||| |||  ||||| || |||| | |||||||| |||||||||||||||||| ||  |||||||  |    
T  17749695 aatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttcc 17749794  T
Q  170 aaaatgta 177  Q
    ||||||||    
T  17749795 aaaatgta 17749802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 22190128 - 22190085
Alignment:
Q  63 tgatgaggaatgctaacaacactctcttttgatcactctctcta 106  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||    
T  22190128 tgatgagtaatgctaacaacactctcttttgaacaccctctcta 22190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 31502647 - 31502556
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||| |||||||| ||||| | || |||||||| |||  ||||| || |||| ||||||||| ||||||||||||| ||| ||||    
T  31502647 gaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtg 31502556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 46067940 - 46068035
Alignment:
Q  73 tgctaacaacactctcttttgatcactctctct-agcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    ||||| |||||||||||||| | | |||||||| | |||  |||| ||| |||| |||||||||||||||| ||||||||||||||| ||| ||||    
T  46067940 tgctagcaacactctctttttagcgctctctcttaacactcactcccttattggttgaaatcaatgtatgttccaccactttatgtgggttccatt 46068035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 11824256 - 11824218
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctct 103  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  11824256 atgagtaatgctaacaacactctcttttgaacactctct 11824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 26189962 - 26190052
Alignment:
Q  128 aaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    ||||||||| |||||||||||| | ||||| ||||||||  |||| |||||||   || ||||||| ||| ||||||||||| ||||||||    
T  26189962 aaatcaatgcatgtcccaccacctcatgtgggtttcattttcaaagtgtaggtcctacgttgattttacccaataaaagagtgagtgttag 26190052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 11824066 - 11824150
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccacca 148  Q
    ||||| |||| || ||||||||  |||| | | |||||||||||||  ||||| || |||| |||||||||||||||||||||||    
T  11824066 atgagaaatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccacca 11824150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 28232150 - 28232222
Alignment:
Q  144 caccactttatgtgagtttcattgacaaaatgtaggttaacattgatttcacctaataaaagagtaagtgtta 216  Q
    ||||||||||||||||    |||  |||| ||||||  |||||||||||| |||||||||||||| |||||||    
T  28232150 caccactttatgtgagacctattttcaaagtgtaggccaacattgatttcgcctaataaaagagtgagtgtta 28232222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 44511121 - 44511033
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||| || ||||||||||||  ||||| | |||||||||||||||  ||| | || |||| ||||||||||||||||| || ||||||    
T  44511121 atgagtaaagctaacaacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcacttt 44511033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 40971638 - 40971484
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||| || ||| |||||||||||||||||||||||||||||||| ||||||    
T  40971638 atgaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttc 40971539  T
Q  164 attgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |||  |||| ||||||| | |||||||||| ||| ||||||| ||| ||||||||    
T  40971538 atttccaaagtgtaggtcttacattgattttacccaataaaatagtgagtgttag 40971484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 42224775 - 42224626
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttca 164  Q
    |||||||||||| |||||||||||||||| |||||||||||||||  ||||| || || |||||||||||||||||||||||||||||||||| ||| ||    
T  42224775 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttcca 42224676  T
Q  165 ttgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    ||  |||| |||||||   |||||||||||||| ||||||||||| ||||    
T  42224675 tttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtg 42224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 213
Target Start/End: Original strand, 4959275 - 4959423
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| |||||||||||||||| |||||||||||  ||| ||||| || |||||||||||||||||||||| || || |||||||| ||| |||    
T  4959275 gaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttacat 4959374  T
Q  166 tgacaaaatgtaggtta-acattgatttcacctaataaaagagtaagtg 213  Q
    |  |||| ||||||| | ||||||||||| || ||||||||||| ||||    
T  4959375 tttcaaagtgtaggtgatacattgatttcccccaataaaagagtgagtg 4959423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 213
Target Start/End: Original strand, 26072106 - 26072248
Alignment:
Q  73 tgctaacaacactctcttttgatcactctctctagcacctactc-tcttttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaa 171  Q
    |||||||||||||||||||||| |||||| ||||  ||  | || | |||||||||||||||||||||||| ||||||||||||||   ||||||  |||    
T  26072106 tgctaacaacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgtatgtctcaccactttatgtggaattcatttccaa 26072205  T
Q  172 aatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    | |||||||   |||||| ||||||| ||||||||||| ||||    
T  26072206 agtgtaggtcccacattgttttcacccaataaaagagtgagtg 26072248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 24915110 - 24915200
Alignment:
Q  124 ggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||  |||| |||| ||   |||||||||||||| ||||||||||| ||||    
T  24915110 ggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 24915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 24990938 - 24991031
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    ||||||||||||||| ||||||||||||||||||||  ||| ||||  |||| |||| ||   |||||||||||||| ||||||||||| ||||    
T  24990938 ttgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 24991031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 26072291 - 26072218
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgt 137  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||  ||||| || |||||||||| ||||||    
T  26072291 atgaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 32050490 - 32050413
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccac 146  Q
    |||||||| |||||||||||||||| || ||||||||||||  ||| | || ||||||||||||||||||||| ||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 6263893 - 6263969
Alignment:
Q  80 aacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatg 155  Q
    ||||||||||||||| ||||||||||| |||  ||||  || |||||| |||||||| |||||||||||||||||||    
T  6263893 aacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccactttatg 6263969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 213
Target Start/End: Original strand, 8912511 - 8912655
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgac 169  Q
    ||||||| |||| ||||||||| | |||| | ||||||||  ||||| || || ||| |||| ||| |||||||| ||||||| |||| ||||||||  |    
T  8912511 aatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaattaatatatgtccctccactttctgtgggtttcatttcc 8912610  T
Q  170 aaaatgtaggtta-acattgatttcacctaataaaagagtaagtg 213  Q
    ||| |||| || | | |||||||||||||||||||||||| ||||    
T  8912611 aaagtgtatgtcatatattgatttcacctaataaaagagtgagtg 8912655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 17568696 - 17568768
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||| ||||| || |||| |||||| ||||||    
T  17568696 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 17568768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 32401114 - 32401214
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||| || |||||||| |||| | ||||||||| | ||| ||||||||| ||| ||||||| ||||||| | ||||||||||||||| ||| |||    
T  32401114 gaggaatgcaaataacactctattttcaacactctctcaaacacttactctcttattgagtgaaattaatgtatattccaccactttatgtgggttccat 32401213  T
Q  166 t 166  Q
    |    
T  32401214 t 32401214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 42224585 - 42224657
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| ||||||||||||||||  |||||||| |||||  ||||| || ||||||||||||||||||    
T  42224585 gaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgta 42224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 4959465 - 4959391
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtat 139  Q
    |||||| |||||  ||||||||||||||| |||||||||||||||  ||||| || ||||| |||||||||||||    
T  4959465 tgaggagtgctagtaacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 17568879 - 17568798
Alignment:
Q  73 tgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttta 153  Q
    ||||||||||||  ||||||||  |||||| |||||||  ||||| || ||| ||||||||||| |||||||||||||||||    
T  17568879 tgctaacaacacaatcttttgagtactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccacttta 17568798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 34368545 - 34368492
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt 120  Q
    ||||||||||| |||||||||||||||| ||||||||||  |||| ||||||||    
T  34368545 gaggaatgctagcaacactctcttttgagcactctctctgtcacccactctctt 34368492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 10253210 - 10253170
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  10253210 ttggatgaaattaatgtatgtcccaccactttatgtgagtt 10253170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 30326054 - 30325962
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| ||||| || ||||||  |||||||| ||||||  ||| | || |||| ||||||||||||||||| |||||||||||| |||||    
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagtt 30325962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 28611961 - 28611922
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctcta 106  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  28611961 gaggaatgctaacaacactcacttttgagcactctctcta 28611922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 39246605 - 39246700
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    ||||||||||| ||||| || ||||||| ||  ||||||| ||   ||| |||| |||| | ||||||||||||||||||||||||| ||||||||    
T  39246605 gaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagtt 39246700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 6264069 - 6263995
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||| ||||| |||||||||||||| | |||||| ||||||||  ||||| ||  |||||||||||||||||    
T  6264069 atgaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgta 6263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 27592622 - 27592540
Alignment:
Q  80 aacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    ||||||| ||||||  |||||||| ||||||  ||| | || |||| ||||||||||||||||| |||||||||||| |||||    
T  27592622 aacactcgcttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagtt 27592540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 28611777 - 28611823
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactct 117  Q
    ||||||| |||||||||||||||| ||||||||||| |||| |||||    
T  28611777 aatgctagcaacactctcttttgagcactctctctaacaccaactct 28611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 5413865 - 5413808
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtag 178  Q
    |||| ||||||||||||||||||||||||||| |||| |||  ||| ||||| |||||    
T  5413865 ttggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtag 5413808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 32309477 - 32309562
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactt 151  Q
    |||||||||||   |||||||||||| | || ||||||||||||  |||||||| |||| | |||| ||||||||||| |||||||    
T  32309477 gaggaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 40926232 - 40926191
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctcta 106  Q
    ||||| ||||||||||||||| |||||||| |||||||||||    
T  40926232 atgagaaatgctaacaacactttcttttgagcactctctcta 40926191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 2443683 - 2443723
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctag 107  Q
    ||||||||||| |||||||||||||||| |||||| |||||    
T  2443683 gaggaatgctagcaacactctcttttgagcactctgtctag 2443723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 17537287 - 17537203
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccacca 148  Q
    |||||||||| |||||| |||| ||||| | ||||||||||| |||  ||||| || || | | |||||||||||||||||||||    
T  17537287 atgaggaatgataacaatactcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccacca 17537203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 34384819 - 34384779
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||||||||||||||||| | ||| ||||||||    
T  34384819 ttgggtgaaatcaatgtatgtcccactattttgtgtgagtt 34384779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 213
Target Start/End: Complemental strand, 19090398 - 19090250
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||    
T  19090398 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 19090299  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |  |||| |||||||   ||||||| |||| | ||||||||||| ||||    
T  19090298 ttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtg 19090250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 35128900 - 35128754
Alignment:
Q  73 tgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaa 171  Q
    ||||| |||||||||||||||| ||||||||||||||   ||||| || |||||| |||||||||||||||||||||||||||||| ||| ||||  |||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  172 aatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    | |||||||   |||||||||||||| ||||||| | | ||||||||    
T  35128800 agtgtaggtcctacattgatttcacccaataaaaaaatgagtgttag 35128754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 6531481 - 6531381
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| ||||||||||||||||  |||||||| |||||  ||||| || |||||||||||||||||||||||||| |||||||||||||| |||    
T  6531481 gaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttccat 6531382  T
Q  166 t 166  Q
    |    
T  6531381 t 6531381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 373396 - 373548
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||| ||| | || |||||| |||||||||||||||||| |||||||||||  || |||    
T  373396 gaggaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcactttatgtggattccat 373495  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |  ||||  ||||||   |||||||||| | | ||||||| ||||||||||||    
T  373496 tttcaaagggtaggtcctacattgattttatccaataaaatagtaagtgttag 373548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 10060856 - 10061008
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| |||||||||||||||| |||||| | || ||   ||||| || ||  |||||||||||||||||||| |||||||||||| ||| |||    
T  10060856 gaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccat 10060955  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |  |||| |||||||   |||||||| ||||| ||||||| ||| ||||||||    
T  10060956 tttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtgttag 10061008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 12794938 - 12794883
Alignment:
Q  125 gtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt 180  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  12794938 gtgaaattaatgtatatcccaccactttatgtgagtttcattttcaaaatgtaggt 12794883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 19737605 - 19737470
Alignment:
Q  80 aacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtag 178  Q
    |||||| | |||||| |||||||||||||||  ||||| |  ||||||||||||||||||| ||| | ||||||||||| ||||||||  |||| |||||    
T  19737605 aacactttattttgagcactctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtag 19737506  T
Q  179 gt-taacattgatttcacctaataaaagagtaagtg 213  Q
    ||   |||||||||| | | ||||||||||| ||||    
T  19737505 gtcctacattgatttgagccaataaaagagtgagtg 19737470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 19090207 - 19090281
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||  ||||| || |||| |||| ||||||||    
T  19090207 atgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgta 19090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 21987292 - 21987384
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||||| || ||||||  |||||||| ||||||  ||| | || |||| |||||||||||||| ||||||||||||||| |||||    
T  21987292 gaatgctaacaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagtt 21987384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 34905337 - 34905419
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||||| ||||||||  |||| | ||||||||||| |||  ||||| || |||| |||||||||||||||||||||||||||    
T  34905337 aatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccacttt 34905419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 31116295 - 31116216
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactct-cttttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||| ||||||| ||||||||||| ||   ||||| || |||| ||||||||||||||||||||| ||||| ||||    
T  31116295 caacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtg 31116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 445813 - 445906
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||||| ||| ||||  |||| | |||| ||||||||||  ||| | || |||| ||||||||||||||||| ||||||||| ||||    
T  445813 atgaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtg 445906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 4595768 - 4595825
Alignment:
Q  96 cactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    |||||||||||||||  ||||| || ||| |||||||||||||||||| |||||||||    
T  4595768 cactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccacttt 4595825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 11135734 - 11135884
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||  ||| | || ||||||||||||||||||||||||||||||||||||| ||| |    
T  11135734 atgaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcc 11135833  T
Q  164 attgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||  |||| |||||||   |||||||||||||| ||||||||||| ||||    
T  11135834 atttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtg 11135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 11430434 - 11430585
Alignment:
Q  63 tgatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||  ||||| || ||||||||||||||||||||||||||||||||||||| |||    
T  11430434 tgatgaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtt 11430533  T
Q  162 tcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
     ||||  |||| |||||||   ||||||| |||||| ||||||||||| ||||    
T  11430534 ccatttccaaagtgtaggtcctacattgaattcacc-aataaaagagtgagtg 11430585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 32848770 - 32848618
Alignment:
Q  63 tgatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||| || ||||||||||||| |||||||||||||||||||||||  ||    
T  32848770 tgatgaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggatt 32848671  T
Q  162 tcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
     ||||  |||| |||||||   ||||||| |||| | ||||||||||||||||    
T  32848670 ccattttcaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtg 32848618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 41917995 - 41918140
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattga 168  Q
    |||||||| |||||||||||||||| ||| |||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||  || ||||      
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccatttt 41918094  T
Q  169 caaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||| |||||||   |||||||||| ||| ||||||||||| ||||    
T  41918095 caaagtgtaggtcctacattgattttacccaataaaagagtgagtg 41918140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 9165299 - 9165399
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| | |||||||||||||| |||||| ||| ||||  ||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  9165299 gaggaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgtatgtcctaccactttatgtgagtttcat 9165398  T
Q  166 t 166  Q
    |    
T  9165399 t 9165399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 44739115 - 44739210
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| || |||||||||||||||| |||||||||||||||  ||||| || ||| ||||||| |||||||||||||||||||||||||||||    
T  44739115 gaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagtt 44739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 41095788 - 41095654
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactc-tcttttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgac 169  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||| | | ||||||||||||||||||||||||| |||| | |||| ||| ||||  |    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttc 41095689  T
Q  170 aaaatgtaggt-taacattgatttcacctaataaa 203  Q
    ||| |||||||   |||||||||||||| ||||||    
T  41095688 aaagtgtaggtcctacattgatttcacccaataaa 41095654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 14094184 - 14094033
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| | ||| | |||||||| ||||||||| |||||  ||| | || ||||||||||||||||||||||||||||||||||||| ||| |||    
T  14094184 gaggaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 14094085  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgtta 216  Q
    |  |||| |||||||   |||||||||||||  ||| ||| ||| |||||||    
T  14094084 ttccaaagtgtaggtcctacattgatttcactcaatcaaaaagtgagtgtta 14094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 26980445 - 26980350
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||||||||||| ||||| | |||||||||||  ||  ||||| || |||| ||||||||||||||||||||||| ||| ||||||||    
T  26980445 gaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagtt 26980350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 11135929 - 11135853
Alignment:
Q  63 tgatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||| |||||| ||||||||||||||||  ||||||||||||||  ||||| || ||||||||||||||||||    
T  11135929 tgatgagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 11430626 - 11430555
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  ||||| || | |||||| ||||||||    
T  11430626 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggtgaattcaatgta 11430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 25543337 - 25543423
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||||||||| |||||||| ||||| | ||||||||||| ||| |||||| || || | |||||||||| ||||||||||||||||    
T  25543337 gaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccacttt 25543423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 43851219 - 43851130
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttat 154  Q
    ||||||||| || |||||||||||||| | | | |||||||| ||  ||||  || ||||||||||||||||||||||||||||||||||    
T  43851219 tgaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttat 43851130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 50308875 - 50308830
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  50308875 ttgggtgaaatcaatatatgtcccaccattttatgtgagtttcatt 50308830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 13388467 - 13388368
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactt--tatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |||||||||||||||||||||| ||||||||  |||||| ||||||||  |||| |||||||   |||||||||||| | ||||||| ||| ||||||||    
T  13388467 ttgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttcatccaataaaaaagtgagtgttag 13388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 15523210 - 15523302
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| ||||| || ||||||  |||||||| ||||||  ||| | || |||| |||||||||||||||||||||||||||||| |||||    
T  15523210 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagtt 15523302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 15531204 - 15531296
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| ||||| || ||||||  |||||||| ||||||  ||| | || |||| |||||||||||||||||||||||||||||| |||||    
T  15531204 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagtt 15531296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 19101781 - 19101689
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| ||||| || ||||||  |||||||| ||||||  ||| | || |||| |||||||||||||||||||||||||||||| |||||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagtt 19101689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 22540368 - 22540460
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||| ||||| || ||||||  |||||||| ||||||  ||| | || |||| |||||||||||||||||||||||||||||| |||||    
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagtt 22540460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 41095603 - 41095675
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctac-tctcttttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  || | | | ||||||||||||||||||    
T  41095603 gaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgta 41095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 2225254 - 2225312
Alignment:
Q  100 ctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||||||| ||||| || |||| ||||||||||||||||||||||||||| ||||    
T  2225254 ctctctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtg 2225312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 18157032 - 18157122
Alignment:
Q  64 gatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttta 153  Q
    |||||| |||||||   |||||||||||| | ||||||||||| |||| ||| | || |||| |||||| |||||||||||||||||||||    
T  18157032 gatgagaaatgctagggacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttta 18157122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 39019572 - 39019650
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatgtatgtcccaccact 150  Q
    ||||||||||| |||||||||||||| | ||||||||| | |||    ||| | ||||||||||||||||||||||||||||||    
T  39019572 gaggaatgctagcaacactctcttttcaacactctctcaaacac----tct-tattgggtgaaatcaatgtatgtcccaccact 39019650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 4578752 - 4578671
Alignment:
Q  73 tgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatg 155  Q
    ||||| |||||||||||||| | ||||||||  | |||  ||||| || |||||||||||||||||| ||||||||||||||||    
T  4578752 tgctagcaacactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtaggtcccaccactttatg 4578671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 32848577 - 32848649
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||| ||||| |||||||||||||||| |||| |||||||||| |||||| || |||| |||| ||||||||    
T  32848577 gaggactgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 32848649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 13889329 - 13889290
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctcta 106  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  13889329 gaggaatgctagcaacactctcttttgaacactctctcta 13889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 6133807 - 6133725
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccacca 148  Q
    ||||||||||| |||||||| ||||| | || ||||||||||||  || || || |||| |||||||||| ||||||||||||    
T  6133807 gaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccacca 6133725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 29418668 - 29418595
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt--ttgggtgaaatcaatgta 138  Q
    ||||||||||| ||||| ||||||||||||||||||| || |||  ||| | ||  ||||||||||||||||||    
T  29418668 gaggaatgctagcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgta 29418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 15660952 - 15661040
Alignment:
Q  128 aaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggttaacattgatttcacctaataaaagagtaagtgttag 217  Q
    ||||||||| |||||||||||||||||| | |||| |||  ||||||||| |   |||||||||| ||| ||||| ||||| ||||||||    
T  15660952 aaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatg-acacattgatttaacccaataatagagtgagtgttag 15661040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 30678906 - 30678959
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt 120  Q
    ||||||||||| ||||||||| |||||| ||||||||||| |||  ||||||||    
T  30678906 gaggaatgctagcaacactcttttttgagcactctctctaacactcactctctt 30678959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 13114849 - 13114765
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttat 154  Q
    ||||||| | |||||||||||||  ||||||||||| |||  ||||| || || | | |||||||| ||||||||||||||||||    
T  13114849 aatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttat 13114765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 13388331 - 13388403
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| ||||||||||||||||  |||||||||| |||  ||| | || |||| |||||||||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 28109885 - 28109965
Alignment:
Q  87 tcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    |||||||| |||| ||||||||||  ||| | || |||||||||||||||| |||| |||||| |||||||| ||| ||||    
T  28109885 tcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccatt 28109965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 37553110 - 37553046
Alignment:
Q  89 ttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    |||||| ||||||||||||||| |||| |||| |||| |||||| ||||| ||||||| ||||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttt 37553046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 37315559 - 37315705
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||| ||||||| |||||||||||||||| ||||||||||| |||  |||||  ||||||||||||||||||||||||||||||||||||| ||||||||    
T  37315559 tgagaaatgctagcaacactctcttttgagcactctctctaacactcactct--tttgggtgaaatcaatgtatgtcccaccactttatgtaagtttcat 37315656  T
Q  166 tgacaaaatgtaggtt-aacattgatttcacctaataaaagagtaagtg 213  Q
    |  ||||  |||||||  |||||||||||||| ||||||||||| ||||    
T  37315657 tttcaaagcgtaggttctacattgatttcacccaataaaagagtgagtg 37315705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 13069936 - 13070099
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatgtatgtcccaccactttatgtgagtttca 164  Q
    |||||||||||||  || |||||||||||| ||| |||||||||||  ||||| || | |||||||||||||||||| ||||||||||||||| ||| ||    
T  13069936 atgaggaatgctaggaatactctcttttgagcacactctctagcactcactcttttattggtgaaatcaatgtatgttccaccactttatgtgggttcca 13070035  T
Q  165 ttgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttagcaaaaatgtt 227  Q
    ||  |||| |||||||   |||||||||| ||  ||||||||||| ||||||||  ||||||||    
T  13070036 ttttcaaagtgtaggtcctacattgattttactcaataaaagagtgagtgttagagaaaatgtt 13070099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 16178597 - 16178732
Alignment:
Q  83 actctcttttgatcactctctctagcacctactctcttttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggtt- 181  Q
    |||||||||||  |||||||||||||||  ||||| | ||| ||||||||||||||||||||||||||||||||| ||| ||||  |||| ||||||||     
T  16178597 actctcttttgtgcactctctctagcactcactctttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggttc 16178696  T
Q  182 aacattgatttcacctaataaaagagtaagtgttag 217  Q
     |||||||||||| | ||||||||||| || |||||    
T  16178697 tacattgatttcatccaataaaagagtgagagttag 16178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 42862604 - 42862504
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||  ||| | || ||||||||||||||||||||||||||||||||||||| ||| |||    
T  42862604 gaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42862505  T
Q  166 t 166  Q
    |    
T  42862504 t 42862504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 213
Target Start/End: Complemental strand, 47237923 - 47237776
Alignment:
Q  68 aggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    |||||||||| |||||||||||||||| ||||||||||||||   ||||| || |||| |||||||||| |||||||||||||||||| | |||||||||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  167 gacaaaatgtaggtt-aacattgatttcacctaataaaagagtaagtg 213  Q
      |||| ||||||||  ||||  |||||| | ||||||||||| ||||    
T  47237823 ttcaaagtgtaggttctacatgaatttcatccaataaaagagtgagtg 47237776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 51206100 - 51206188
Alignment:
Q  126 tgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||||||   |||||||||||||| ||||||||||| ||||    
T  51206100 tgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaaagagtgagtg 51206188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 25719267 - 25719183
Alignment:
Q  96 cactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtagg 179  Q
    ||||||||| | |||  |||||||| |||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  25719267 cactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtagg 25719183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 213
Target Start/End: Original strand, 39016664 - 39016808
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgac 169  Q
    ||||||| ||||| |||||||| | |||||||| || ||| |||| | || |||| ||||||||||||||||||||||| |||| ||| ||| ||||  |    
T  39016664 aatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttcc 39016763  T
Q  170 aaaatgtaggtta-acattgatttcacctaataaaagagtaagtg 213  Q
    ||| |||||  |  |||||||||| ||||||||||||||||||||    
T  39016764 aaagtgtagtatctacattgattttacctaataaaagagtaagtg 39016808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 8108951 - 8109033
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccac 146  Q
    ||||| ||||||| |||||||| ||||| | |||||||||||||||  ||||| || ||||||||||||||||||||||||||    
T  8108951 atgagaaatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccac 8109033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 44832459 - 44832551
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||||||||||||| |||||||||| || ||| |||| |||  ||| | || ||||||||||| |||||||||||||||| ||||||||    
T  44832459 tgaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtg 44832551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 51206228 - 51206157
Alignment:
Q  68 aggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||| ||| |||||||||||||||| |||||||||||||||  ||||| || ||||||||||||||||||    
T  51206228 aggaatactagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 2187983 - 2187905
Alignment:
Q  80 aacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||||||| |||||||||||||     |||| || |||||||||||||||| ||||||||||||||||||||    
T  2187983 aacactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtg 2187905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 19447169 - 19447237
Alignment:
Q  108 cacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatg 175  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||  |||||||    
T  19447169 cacccactctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatg 19447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 39471152 - 39471240
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||||||||||| |||||||| ||||| |  ||||||| || |||| ||||| || || | |||||||||||||||||||||||||||    
T  39471152 atgaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccacttt 39471240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 2088836 - 2088757
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||| ||||||  |||||||||| |||  ||||| |  ||| |||||||||||||||||||||||||||||||||    
T  2088836 caacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtg 2088757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 42862415 - 42862490
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgt 141  Q
    ||||||||||| |||||||||||||||| |||| | ||||||||  ||||| || ||||||||||||||| |||||    
T  42862415 gaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgt 42862490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 40812034 - 40812148
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||| |||||| ||||||||| |||||| |||||||||||||||  ||||| || ||||||||||||||| | | || ||||| || | ||| |||||||    
T  40812034 gaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaatatttatcacaccatttaacgtgggtttcat 40812133  T
Q  166 tgacaaaatgtaggt 180  Q
    |  |||| |||||||    
T  40812134 ttccaaagtgtaggt 40812148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 41278746 - 41278649
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |||||| |||| ||||||||||| ||||||||||||| ||| ||||  |||||||| |||   ||||| || ||||| ||||||||||||| ||||||    
T  41278746 ttgggtaaaattaatgtatgtcctaccactttatgtgggttccattttcaaaatgttggtcctacattcatatcacccaataaaagagtaaatgttag 41278649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 43771126 - 43771207
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccact 150  Q
    ||||| || |||||||| ||||||| |||||||||||  ||  ||||| || |||| |||||||||||||||||||||||||    
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccact 43771207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 30867096 - 30866976
Alignment:
Q  86 ctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taa 183  Q
    ||||||||| |||| ||||||||||  ||| | || |||| | |||| ||||||||||||||||||||||||| ||| ||||  |||| ||||| |   |    
T  30867096 ctcttttgagcactatctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatccca 30866997  T
Q  184 cattgatttcacctaataaaa 204  Q
    ||||| |||||||||||||||    
T  30866996 cattgttttcacctaataaaa 30866976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 39016837 - 39016777
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||||||||||| ||||||||||||||| |||||| || || ||| |||||||||||    
T  39016837 caacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgta 39016777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 44832649 - 44832577
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||  | | | || ||||||||||||||||||    
T  44832649 gaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgta 44832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 50571861 - 50571952
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||| || ||||| || ||||| | ||||||||||||||| |||||| || || | ||||||||||||||| |||| || ||||||||    
T  50571861 gaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtg 50571952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 37315743 - 37315674
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||| ||||||||| |||||| |||||||  ||||||  ||||| || ||||||||||||||||||    
T  37315743 gaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgta 37315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 40991772 - 40991691
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctct-tttgggtgaaatcaatgtatgtcccacc 147  Q
    ||||||||||| |||||||| ||||| | ||||||||||| |||  ||||| |  |||| |||||||||| |||||||||||    
T  40991772 gaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccacc 40991691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 8109142 - 8109102
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctcta 106  Q
    |||| ||||||| |||||||||||||||| |||||||||||    
T  8109142 tgagtaatgctagcaacactctcttttgaacactctctcta 8109102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 20225522 - 20225433
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||| |||||||| |||||||  || |||||||||||  ||||| || |||| || |||| ||| ||||||||||||||| ||||    
T  20225522 gaggaatgctagcaacactcacttttga--acactctctagcactcactcttttattggatggaatccatgcatgtcccaccactttttgtg 20225433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 47152864 - 47152892
Alignment:
Q  23 ttcttgtgtttttctcaccttcataattg 51  Q
    |||||||||||||||||||||||||||||    
T  47152864 ttcttgtgtttttctcaccttcataattg 47152892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 42182889 - 42183034
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattga 168  Q
    |||||||| |||||||||||||||| |||||||||||||||  ||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||      
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 42182988  T
Q  169 caaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||| |||||||   |||||||||||||| ||||||||||| ||||    
T  42182989 caaagtgtaggtcctacattgatttcacccaataaaagagttagtg 42183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 28898222 - 28898072
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||  ||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  28898222 atgaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttc 28898123  T
Q  164 attgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||  |||| ||||| |   |||||||||||| | ||||||||||| ||||    
T  28898122 atttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtg 28898072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 1107047 - 1107123
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttat 154  Q
    |||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  1107047 caacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttat 1107123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 4964857 - 4964742
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttca 164  Q
    |||||||||||| ||||| ||||||||||  ||||||||||||||  ||| | || |||||||||||||||||||||||||||||||||||||  |||||    
T  4964857 tgaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttca 4964758  T
Q  165 ttgacaaaatgtaggt 180  Q
    ||  |||| |||||||    
T  4964757 ttttcaaagtgtaggt 4964742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 1110195 - 1110347
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| ||||||||||||| || || |||||||| |||  ||||| || ||| ||||||||||||||||||||||||||||||||| ||| |||    
T  1110195 gaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccat 1110294  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |  |||| | || ||   |||||||||||||| ||||||||||| | ||||||    
T  1110295 ttccaaagtatatgtcctacattgatttcacccaataaaagagtgaatgttag 1110347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 37228493 - 37228644
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtg-aaatcaatgtatgtcccaccactttatgtgagttt 162  Q
    ||||| ||||||| |||||||||||||||| |||||||||||||||  ||||| || ||||||| |||| ||||||||||||||||||||||||| |||     
T  37228493 atgagaaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttc 37228592  T
Q  163 cattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    | ||  |||| || ||||   |||||||||||||| ||||||| ||| ||||    
T  37228593 cgttttcaaagtgcaggtcctacattgatttcacccaataaaaaagtgagtg 37228644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 15508910 - 15509059
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttca 164  Q
    ||||||||| || |||||||||||||||| |||||| |||| |||  ||||| || ||| |||||||||||||||||||||||| ||| |||| ||| ||    
T  15508910 tgaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttcca 15509009  T
Q  165 ttgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    ||  |||| ||||| |   |||||||||||||| ||| ||||||||||||    
T  15509010 tttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtg 15509059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 31395629 - 31395537
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||| || |||||||||||||||| |||||||| ||||||  ||||  || |||||||||||||||||||||||| ||||||||||||    
T  31395629 tgaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtg 31395537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 26767946 - 26767858
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||||||||||| |||||||| ||||| | || |||||||||||| |||||| ||  ||| |||||||||||||||||||||||||||    
T  26767946 atgaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccacttt 26767858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 45554562 - 45554650
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    |||| |||||||| |||||||| ||||| | |||||||||||||||  ||||| || |||| |||||||||||||||||||||||||||    
T  45554562 atgaagaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccacttt 45554650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 11539419 - 11539517
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatca--atgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||||||||||||  |||||| |||||| ||||||||  ||||| || |||| ||||||||  |||||||| ||| |||||| ||||||||    
T  11539419 tgaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagtt 11539517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 42183077 - 42183003
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||||||||  ||||||||||||||| |||||||||  ||||  ||||| || ||||||||||||||||||    
T  42183077 atgaggaatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgta 42183003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 18511394 - 18511301
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||||| |||||||| ||||| | ||||||| ||| |||  ||||| || |||| | ||||||||||||||||||| | ||||||||    
T  18511394 atgaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtg 18511301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 20951603 - 20951673
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| ||  ||||||||||| || ||| || ||||||||||||||||||    
T  20951603 gaggaatgctagcaacactctcttttgagca--ctctctagcacttattcttttattgggtgaaatcaatgta 20951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 37228685 - 37228613
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||| |||| |||||||||||||||| |||||| ||||||||  ||| | || ||||||||||||||||||    
T  37228685 gaggaaggctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgta 37228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 37719831 - 37719903
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||| ||||| |||||||||| |||||| ||||||||  ||||| || |||| |||||||||||||    
T  37719831 gaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 6980299 - 6980208
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    ||||||| ||||| || ||||| | |||||||||||||||  ||||| || |||| ||||||||| |||||| | |||||||| ||||||||    
T  6980299 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagtt 6980208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 10339783 - 10339854
Alignment:
Q  87 tcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||| |||||||||||||||  ||| | || |||||  ||||||||| ||||||||||||||||||||    
T  10339783 tcttttgaacactctctctagcactcactattttattggggaaaatcaatgaatgtcccaccactttatgtg 10339854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 32856324 - 32856285
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctc 104  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  32856324 atgaggaatgctaacaacactcacttttgaacactctctc 32856285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 6315844 - 6315810
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactct 101  Q
    |||||||||||||||||||||||||||| ||||||    
T  6315844 gaggaatgctaacaacactctcttttgagcactct 6315810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 41546212 - 41546111
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    ||||||||||||| || ||||||||||| | ||||||||| | ||   |||||||| |||| || ||||||| |||||||| |||||||| ||||||| |    
T  41546212 atgaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtcccgccactttacgtgagttcc 41546114  T
Q  164 att 166  Q
    |||    
T  41546113 att 41546111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 41805959 - 41805873
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||||||||| ||||||||| |||||  |||| ||| || |||  ||||| || |||| | |||||||||||||||||||||||||    
T  41805959 gaggaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 27968919 - 27968980
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaat 131  Q
    ||||||| ||||||||||||||||  ||||||||||||||  ||||| || |||||||||||    
T  27968919 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 28091668 - 28091607
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaat 131  Q
    ||||||| ||||||||||||||||  ||||||||||||||  ||||| || |||||||||||    
T  28091668 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 28101900 - 28101839
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaat 131  Q
    ||||||| ||||||||||||||||  ||||||||||||||  ||||| || |||||||||||    
T  28101900 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 28898034 - 28898103
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||| ||||||||||||||||  ||||||| ||||||  ||||| || |||| |||||||||||||    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 40535174 - 40535093
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccac 146  Q
    |||||||||||||||||||| ||||| || ||| ||||||| |||  ||||| || |||||| |||||||| ||||| ||||    
T  40535174 tgaggaatgctaacaacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaatatatgttccac 40535093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 15509100 - 15509028
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctct-tttgggtgaaatcaatgta 138  Q
    |||||||| || |||||||||||||| | |||||||| || ||| |||||| |  ||||||||||||||||||    
T  15509100 gaggaatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgta 15509028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 33747086 - 33747015
Alignment:
Q  83 actctcttttgatcactctctctagcacct-actctcttttgggtgaaatcaatgtatgtcccaccactttat 154  Q
    |||||||||||| |||||||| ||| |||| ||||| || | | |||||||||| ||||||||||||||||||    
T  33747086 actctcttttgaacactctctttag-acctcactcttttattgatgaaatcaatatatgtcccaccactttat 33747015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 37600313 - 37600213
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||    
T  37600313 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 37600214  T
Q  166 t 166  Q
    |    
T  37600213 t 37600213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 10769909 - 10769760
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttca 164  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||| ||||| || || ||||||||||||||||||||||||||||||| || ||| ||    
T  10769909 tgaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttcca 10769810  T
Q  165 ttgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    ||   ||| |||||||   |||||||||||| | ||||||||||||||||    
T  10769809 tttctaaagtgtaggtcctacattgatttcatcaaataaaagagtaagtg 10769760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 54141072 - 54140928
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgac 169  Q
    |||| |||||||||| |||||||| |||||||||||||||  ||||  || ||||||||||||||||||||||||||||||||| ||| ||| ||||  |    
T  54141072 aatgttaacaacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttc 54140973  T
Q  170 aaaatgtaggtt-aacattgatttcacctaataaaagagtaagtg 213  Q
    ||| ||||||||  |||||||||||| | |||||| |||| ||||    
T  54140972 aaagtgtaggttctacattgatttcatccaataaatgagtgagtg 54140928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 46237217 - 46237090
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgta 177  Q
    |||||||||||||||| ||||||||||||||   ||||| || |||| |||||||||||||||||||||||||||||||| ||| ||||   ||||||||    
T  46237217 caacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaaatgta 46237118  T
Q  178 ggt-taacattgatttcacctaataaaa 204  Q
    |||   |||||||||||| | |||||||    
T  46237117 ggtcctacattgatttcatccaataaaa 46237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 27243040 - 27243142
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    |||||| |||||| |||||||||||||||| ||||||||||| |||  ||||| || |||| | ||||||||| |||||||||||||||||||| ||| |    
T  27243040 atgagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttcc 27243139  T
Q  164 att 166  Q
    |||    
T  27243140 att 27243142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 28529248 - 28529334
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccact 150  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||  ||||| || |||| |||||||||||||||||||||||||    
T  28529248 atgaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccact 28529334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 43657119 - 43657040
Alignment:
Q  126 tgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaa 204  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||| ||||||| | |||||| ||||||| |||||||    
T  43657119 tgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtaggtctcacattgttttcaccaaataaaa 43657040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 46575945 - 46576056
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||| ||||||||||| || | ||||||||| | |||  |||||||| |||| ||||| ||||||||||||||||||||| |||| ||| |||    
T  46575945 gaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccat 46576044  T
Q  166 tgacaaaatgta 177  Q
    |  |||||||||    
T  46576045 tttcaaaatgta 46576056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 21232707 - 21232605
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttc 163  Q
    ||||||||||||| |||||| ||||||||| |||| ||| ||||||  | | | || ||||||||||||||||||||| ||||||||||||||| ||| |    
T  21232707 atgaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttcc 21232608  T
Q  164 att 166  Q
    |||    
T  21232607 att 21232605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 37600122 - 37600196
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| ||||| || |||| |||| ||||||||    
T  37600122 atgaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgta 37600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 10769719 - 10769791
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||| || || | |||||||||||||    
T  10769719 gaggaatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgta 10769791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 29775134 - 29775202
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaa 134  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||  ||||| || ||||||||||||||    
T  29775134 atgaggaatgctagcaacactctcttttgagcactctctctagcac--actcttttattgggtgaaatcaa 29775202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 50661693 - 50661594
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgta 177  Q
    |||||||||||||| | ||||||||||| ||| |||||| || || | | ||||||||| |||||||||||||||||||| ||| ||||  |||||||||    
T  50661693 caacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgta 50661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 38928190 - 38928040
Alignment:
Q  69 ggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattg 167  Q
    ||||||||| ||||||| |||||||  |||| ||||||| |   | ||| || |||||| |||||||||||| |||| | ||||||| || ||| ||||     
T  38928190 ggaatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 38928091  T
Q  168 acaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
     |||| ||||||| | |||||||||||||| ||||||||||| ||||||||    
T  38928090 ccaaagtgtaggtcttacattgatttcacccaataaaagagtgagtgttag 38928040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 38928006 - 38928075
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||| ||||||||||||||||||||| |||||| |||  ||||| || ||||||||||||||||||    
T  38928006 gaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 24749036 - 24748941
Alignment:
Q  123 gggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |||||| ||||||||||||||||||| |||||||| ||| ||||   ||| |||||||   |||||||||||| | ||||||||||| ||||||||    
T  24749036 gggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatccaataaaagagtgagtgttag 24748941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 20493628 - 20493542
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    ||||||||||| |||||||| ||||| | ||||||||||| |||  ||||  || |||| |||||||||||||||||| ||||||||    
T  20493628 gaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccacttt 20493542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 26310600 - 26310547
Alignment:
Q  96 cactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccacca 148  Q
    ||||||||||||||| |||||| || |||| |||||||||||||||||||||||    
T  26310600 cactctctctagcacttactcttttattggatgaaatcaatgtatgtcccacca 26310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 37776888 - 37776795
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||||| |||||||| ||||| | |||| |||| |||||  ||||| || || | |||||||||||||||||| |||||||| ||||    
T  37776888 atgaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtg 37776795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 20791348 - 20791388
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  20791348 ttggatgaaatcaatgtatgtcccaccactttatgcgagtt 20791388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 46450063 - 46450148
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    |||||||||||| |||||||| ||||||| ||||||||  |||||  ||||| || || | || ||||||||||||||||||||||||    
T  46450063 tgaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttt 46450148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 54140887 - 54140959
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactc-tcttttgggtgaaatcaatgta 138  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||  |||| | | |||| |||||||||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 5452243 - 5452152
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||| |||||||| ||||| | |||||||| || ||   ||||| || |||| |||||||||||||| |||||||||||| ||||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtg 5452152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 55283236 - 55283146
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagt 160  Q
    |||||||||||||||| ||||| | |||||||| || ||| || ||| || |||| | ||||||||||||   ||||||||||||||||||    
T  55283236 aatgctaacaacactcacttttaaacactctctttaacacttattctattattggataaaatcaatgtatactccaccactttatgtgagt 55283146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 41452080 - 41451987
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||| ||| |||||||| ||||| | |||  ||||||| ||  ||||| || |||| ||||||||| ||||||||||||||||| ||||    
T  41452080 atgaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtg 41451987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 14236071 - 14236111
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||| |||||||||| ||||||||||||||||||| |||||    
T  14236071 ttggatgaaatcaatatatgtcccaccactttatgcgagtt 14236111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 24748916 - 24748976
Alignment:
Q  79 caacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgta 138  Q
    |||||||||||||||| ||||||||||| |||  ||||| || |||| |||||||||||||    
T  24748916 caacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 52951543 - 52951491
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctct 119  Q
    ||||| ||||| |||||||||||||| | |||||||||||||||  |||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactctct 52951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 217
Target Start/End: Complemental strand, 7599605 - 7599453
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    |||||||| || ||||||||| |||||| |||||||||||||||||||||| || |||| |||||||||||||| ||||| ||||||||||| ||| | |    
T  7599605 gaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttcctt 7599506  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtgttag 217  Q
    |  |||| |||||||   |||||||||| ||  ||||||| ||| ||||||||    
T  7599505 ttccaaagtgtaggtcctacattgattttactcaataaaaaagtgagtgttag 7599453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 35689481 - 35689577
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    |||| ||| ||||||||||||||| |||||||||||||||  ||| | || |||| |||||||||||||||||||||||||||||||||||| ||||    
T  35689481 aatggtaagaacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccatt 35689577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 213
Target Start/End: Original strand, 33417680 - 33417827
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctac-tctcttttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcat 165  Q
    ||||||||||||||||||| ||||||||  ||||||||| ||||  || ||| | || ||||||||||||| |||| ||||||||||||||| |||||||    
T  33417680 gaggaatgctaacaacactttcttttgagtactctctct-gcactcacatctttattaggtgaaatcaatgcatgttccaccactttatgtgggtttcat 33417778  T
Q  166 tgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |  |||| |||||||   ||||| |||||||  ||||||||||| ||||    
T  33417779 ttccaaagtgtaggtcctacattaatttcactcaataaaagagtgagtg 33417827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 1205829 - 1205972
Alignment:
Q  72 atgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcattgaca 170  Q
    |||||| |||||||||||||||| |||||||| ||||||  ||||| || || ||| |||| |||||||||| ||||||||||| || |||  |||  ||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttcca 1205928  T
Q  171 aaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    || ||||||| | |||||||||||||  ||||||||||| ||||    
T  1205929 aagtgtaggtcttacattgatttcactcaataaaagagtgagtg 1205972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 28414049 - 28413957
Alignment:
Q  70 gaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    ||||||||||||||||| ||||| | ||||||||||||| |  ||| | || || | ||||||||||||||||||||||||||| ||||||||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagtt 28413957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 1977356 - 1977265
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactct-cttttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||| ||| |||| ||||| | |||||||||||||||  ||||| || |||| |||||||||||||||||| |||||||| ||||    
T  1977356 gaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtg 1977265  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 31301112 - 31301207
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||||||||||| ||||||| ||||||| |||| | ||  ||||  ||||| || |||| |||||||||||||||| |||||||||| ||||||||    
T  31301112 gaggaatgctaataacactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagtt 31301207  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 32072098 - 32072185
Alignment:
Q  71 aatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||| ||||| || ||||| | |||||||||||||||  ||||| || |||| |||||| |||||||||||||||||||| ||||    
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtg 32072185  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 34303562 - 34303473
Alignment:
Q  125 gtgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtaggt-taacattgatttcacctaataaaagagtaagtg 213  Q
    |||||||||||||||||| ||||||| ||||||  ||  |||  |||| ||||||| | |||||||||||||| ||||||||||| ||||    
T  34303562 gtgaaatcaatgtatgtctcaccactctatgtggcttcgattttcaaagtgtaggtcttacattgatttcacccaataaaagagttagtg 34303473  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 35151915 - 35151830
Alignment:
Q  64 gatgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccacca 148  Q
    |||||||||| ||| |||||||| ||||| | |||||| | |||||  |||||| || |||| |||||||||||||||||||||||    
T  35151915 gatgaggaatactagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccacca 35151830  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 23685183 - 23685223
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  23685183 ttggatgaaatcaatgtatgtcccaccactttatgcgagtt 23685223  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 35689667 - 35689623
Alignment:
Q  66 tgaggaatgctaacaacactctcttttgatcactctctctagcac 110  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||    
T  35689667 tgaggaatgctaacggcactctcttttgagcactctctctagcac 35689623  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 41727425 - 41727513
Alignment:
Q  65 atgaggaatgctaacaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    |||||||||||| ||||||||| ||||||| |||||||| |||||   ||||| || || | | |||||||||||||||||||| ||||    
T  41727425 atgaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgcttt 41727513  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 8914768 - 8914859
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctctagcacctactctct-tttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    ||||||||||| |||||||| ||||||| | ||||||||| |||  ||||| |  |||| | ||| ||||||||||||||||||||| ||||    
T  8914768 gaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtg 8914859  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 13407318 - 13407357
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctctcta 106  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  13407318 gaggaatgctagcaacactctcttttgaacactctctcta 13407357  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 5979878 - 5979968
Alignment:
Q  68 aggaatgctaacaacactctcttttgatcactctctctagcacctactct-cttttgggtgaaatcaatgtatgtcccaccactttatgtg 157  Q
    |||||||||| |||||||  ||||| | |||||||||||| |   ||||| || |||| ||| ||||||||||||||||||||||| ||||    
T  5979878 aggaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtg 5979968  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 11310503 - 11310449
Alignment:
Q  113 actctctt-ttgggtgaaatcaatgtatgtcccaccactttatgtgagtttcatt 166  Q
    |||||||| ||| ||||||||||||||||||||||||  |||||||| |||||||    
T  11310503 actctcttattgagtgaaatcaatgtatgtcccaccatattatgtgaatttcatt 11310449  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 34861337 - 34861284
Alignment:
Q  100 ctctctagcacctactctctt-ttgggtgaaatcaatgtatgtcccaccacttt 152  Q
    |||||||||||  ||||| || |||| |||||||||||||||||||||||||||    
T  34861337 ctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccacttt 34861284  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 9952885 - 9952845
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgtgagtt 161  Q
    |||| ||||||||||| ||||||||||||||| ||||||||    
T  9952885 ttggatgaaatcaatgcatgtcccaccactttgtgtgagtt 9952845  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 23142812 - 23142848
Alignment:
Q  67 gaggaatgctaacaacactctcttttgatcactctct 103  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  23142812 gaggaatgctagcaacactctcttttgagcactctct 23142848  T

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Target: scaffold0099 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 27365 - 27400
Alignment:
Q  121 ttgggtgaaatcaatgtatgtcccaccactttatgt 156  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27365 ttgggtgaaatcaatatatgtcccaccactttatgt 27400  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 35651 - 35704
Alignment:
Q  126 tgaaatcaatgtatgtcccaccactttatgtgagtttcattgacaaaatgtagg 179  Q
    |||||||||||||||||||| || |||||||| ||| ||||  |||||||||||    
T  35651 tgaaatcaatgtatgtcccatcattttatgtgggttccattctcaaaatgtagg 35704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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