View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8891_low_53 (Length: 225)

Name: NF8891_low_53
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8891_low_53
NF8891_low_53
[»] chr5 (22 HSPs)
chr5 (1-198)||(19616470-19616666)
chr5 (149-223)||(26832596-26832670)
chr5 (121-225)||(24473810-24473915)
chr5 (150-225)||(21405629-21405704)
chr5 (121-225)||(2153953-2154058)
chr5 (121-225)||(17516291-17516396)
chr5 (123-225)||(29330711-29330814)
chr5 (163-225)||(21914493-21914556)
chr5 (1-51)||(12421925-12421975)
chr5 (121-225)||(20917168-20917273)
chr5 (1-51)||(25698301-25698351)
chr5 (121-225)||(32028761-32028866)
chr5 (1-51)||(33708602-33708652)
chr5 (1-51)||(33709157-33709207)
chr5 (119-225)||(38620275-38620383)
chr5 (150-222)||(17876179-17876251)
chr5 (154-225)||(21554304-21554374)
chr5 (150-225)||(21556950-21557024)
chr5 (1-51)||(17643002-17643052)
chr5 (1-51)||(34716042-34716092)
chr5 (161-225)||(10774665-10774730)
chr5 (11-51)||(10513835-10513875)
[»] scaffold0065 (1 HSPs)
scaffold0065 (54-225)||(55821-55992)
[»] scaffold0338 (1 HSPs)
scaffold0338 (54-225)||(10763-10933)
[»] chr6 (32 HSPs)
chr6 (78-225)||(22375801-22375947)
chr6 (119-225)||(27572123-27572230)
chr6 (132-225)||(20733245-20733338)
chr6 (132-225)||(27852164-27852257)
chr6 (139-225)||(28103449-28103535)
chr6 (54-221)||(16966647-16966813)
chr6 (132-225)||(16246176-16246269)
chr6 (121-225)||(31629862-31629967)
chr6 (119-225)||(17882711-17882818)
chr6 (121-225)||(16198341-16198446)
chr6 (121-225)||(25721041-25721146)
chr6 (121-225)||(34963916-34964021)
chr6 (126-225)||(19401045-19401145)
chr6 (122-225)||(25753385-25753489)
chr6 (122-225)||(25755555-25755659)
chr6 (1-51)||(9980843-9980893)
chr6 (121-225)||(17027865-17027970)
chr6 (119-225)||(22783067-22783175)
chr6 (121-225)||(23992965-23993070)
chr6 (121-225)||(25535951-25536056)
chr6 (121-225)||(25689369-25689474)
chr6 (1-51)||(28193348-28193398)
chr6 (121-225)||(30676040-30676145)
chr6 (119-225)||(8055870-8055977)
chr6 (1-51)||(1218978-1219028)
chr6 (1-51)||(24444381-24444431)
chr6 (1-51)||(25529692-25529742)
chr6 (119-225)||(26923660-26923768)
chr6 (1-51)||(35133626-35133676)
chr6 (161-225)||(19005924-19005989)
chr6 (162-225)||(18259175-18259238)
chr6 (11-51)||(34853632-34853672)
[»] chr4 (28 HSPs)
chr4 (54-225)||(27996672-27996842)
chr4 (54-225)||(19739619-19739789)
chr4 (119-225)||(26014229-26014335)
chr4 (132-225)||(10057619-10057712)
chr4 (54-225)||(13591070-13591240)
chr4 (119-177)||(50161031-50161089)
chr4 (121-225)||(14970028-14970133)
chr4 (121-225)||(363109-363214)
chr4 (121-225)||(3515743-3515848)
chr4 (1-51)||(47559270-47559320)
chr4 (119-222)||(3485808-3485913)
chr4 (1-51)||(5753417-5753467)
chr4 (119-225)||(7640401-7640509)
chr4 (121-225)||(18214525-18214630)
chr4 (1-51)||(35715882-35715932)
chr4 (1-51)||(39716301-39716351)
chr4 (119-225)||(44616130-44616238)
chr4 (1-51)||(47559811-47559861)
chr4 (119-225)||(50221553-50221661)
chr4 (121-225)||(52872403-52872508)
chr4 (121-225)||(12778197-12778303)
chr4 (119-225)||(15489470-15489577)
chr4 (121-225)||(19858348-19858454)
chr4 (59-102)||(21189084-21189127)
chr4 (121-221)||(11773-11874)
chr4 (1-51)||(578178-578228)
chr4 (119-225)||(18238827-18238935)
chr4 (119-225)||(19243542-19243650)
[»] chr2 (33 HSPs)
chr2 (54-225)||(24834024-24834194)
chr2 (108-225)||(24792760-24792877)
chr2 (132-221)||(27473414-27473503)
chr2 (132-225)||(34858193-34858286)
chr2 (132-225)||(34873255-34873348)
chr2 (132-222)||(20916265-20916355)
chr2 (121-225)||(45027221-45027326)
chr2 (121-225)||(6726783-6726888)
chr2 (121-225)||(22106201-22106306)
chr2 (121-225)||(23932196-23932301)
chr2 (121-225)||(32214251-32214356)
chr2 (122-225)||(18388191-18388295)
chr2 (163-225)||(19358879-19358942)
chr2 (1-51)||(9920502-9920552)
chr2 (1-51)||(10049773-10049823)
chr2 (121-225)||(24528868-24528973)
chr2 (119-224)||(24897411-24897518)
chr2 (119-224)||(24899894-24900001)
chr2 (119-224)||(24902371-24902478)
chr2 (119-224)||(24904848-24904955)
chr2 (119-224)||(24907323-24907430)
chr2 (126-225)||(22259990-22260089)
chr2 (1-51)||(4292425-4292475)
chr2 (1-51)||(9545404-9545454)
chr2 (121-225)||(21154136-21154241)
chr2 (121-225)||(23706347-23706452)
chr2 (1-51)||(24521244-24521294)
chr2 (121-225)||(24671761-24671866)
chr2 (121-225)||(24918876-24918981)
chr2 (119-225)||(26508696-26508804)
chr2 (1-51)||(28607679-28607729)
chr2 (119-225)||(39683155-39683263)
chr2 (166-225)||(44072548-44072608)
[»] scaffold0001 (2 HSPs)
scaffold0001 (54-225)||(498939-499109)
scaffold0001 (121-225)||(501800-501905)
[»] chr3 (32 HSPs)
chr3 (119-225)||(46752051-46752157)
chr3 (134-225)||(6804893-6804984)
chr3 (132-225)||(52988859-52988952)
chr3 (132-225)||(14967142-14967235)
chr3 (121-225)||(38961158-38961264)
chr3 (123-198)||(31223874-31223948)
chr3 (121-225)||(12119186-12119291)
chr3 (121-225)||(13937295-13937400)
chr3 (121-225)||(16282079-16282184)
chr3 (1-51)||(19894683-19894733)
chr3 (121-225)||(41124675-41124780)
chr3 (1-51)||(48522681-48522731)
chr3 (137-185)||(13522243-13522292)
chr3 (161-222)||(40957216-40957277)
chr3 (1-51)||(8393983-8394033)
chr3 (121-225)||(8899559-8899664)
chr3 (1-51)||(11955097-11955147)
chr3 (1-51)||(18683455-18683505)
chr3 (1-51)||(40831512-40831562)
chr3 (119-225)||(45577656-45577764)
chr3 (121-225)||(46822997-46823102)
chr3 (121-225)||(55318625-55318730)
chr3 (122-225)||(20629513-20629617)
chr3 (119-225)||(22758835-22758942)
chr3 (1-51)||(8394539-8394589)
chr3 (1-51)||(9563676-9563726)
chr3 (121-225)||(10379875-10379980)
chr3 (121-225)||(17444084-17444189)
chr3 (1-51)||(19895235-19895285)
chr3 (121-225)||(24514219-24514324)
chr3 (119-225)||(55477331-55477439)
chr3 (126-225)||(49968860-49968960)
[»] chr8 (29 HSPs)
chr8 (89-225)||(13660855-13660991)
chr8 (89-225)||(13719498-13719634)
chr8 (54-225)||(37516488-37516658)
chr8 (132-225)||(19807395-19807488)
chr8 (132-225)||(22237051-22237144)
chr8 (121-225)||(1326446-1326551)
chr8 (121-225)||(15202307-15202412)
chr8 (121-225)||(16412636-16412741)
chr8 (175-225)||(20463196-20463246)
chr8 (121-225)||(32810430-32810535)
chr8 (121-225)||(37609723-37609828)
chr8 (122-225)||(42265510-42265614)
chr8 (1-51)||(4020779-4020829)
chr8 (1-51)||(12756517-12756567)
chr8 (121-225)||(19897250-19897355)
chr8 (121-225)||(20404015-20404120)
chr8 (121-225)||(20457414-20457519)
chr8 (121-225)||(24049346-24049451)
chr8 (121-225)||(27471738-27471843)
chr8 (121-225)||(32122464-32122569)
chr8 (1-51)||(41153021-41153071)
chr8 (1-51)||(44388589-44388639)
chr8 (121-225)||(11361253-11361358)
chr8 (175-225)||(20457993-20458043)
chr8 (122-225)||(5852508-5852612)
chr8 (150-225)||(3273866-3273941)
chr8 (150-225)||(22317912-22317987)
chr8 (11-51)||(30823569-30823609)
chr8 (119-225)||(38549134-38549241)
[»] scaffold0331 (1 HSPs)
scaffold0331 (119-225)||(12116-12223)
[»] scaffold0026 (2 HSPs)
scaffold0026 (134-225)||(22136-22227)
scaffold0026 (177-225)||(10103-10151)
[»] chr7 (37 HSPs)
chr7 (78-225)||(14980671-14980817)
chr7 (54-225)||(15203059-15203229)
chr7 (78-225)||(15410147-15410293)
chr7 (132-225)||(11085478-11085571)
chr7 (54-225)||(9724803-9724973)
chr7 (132-225)||(11091604-11091697)
chr7 (132-225)||(46579760-46579853)
chr7 (126-225)||(8135239-8135338)
chr7 (126-225)||(15623970-15624069)
chr7 (121-225)||(8469278-8469383)
chr7 (121-225)||(9945011-9945116)
chr7 (121-225)||(23461634-23461739)
chr7 (123-225)||(36685147-36685249)
chr7 (121-225)||(5294433-5294538)
chr7 (121-225)||(8941210-8941315)
chr7 (121-225)||(11973091-11973196)
chr7 (126-225)||(14317517-14317617)
chr7 (119-225)||(15140157-15140264)
chr7 (143-225)||(11054682-11054764)
chr7 (150-225)||(30820152-30820226)
chr7 (121-225)||(5295606-5295711)
chr7 (121-225)||(5296779-5296884)
chr7 (121-225)||(14269085-14269190)
chr7 (121-225)||(21188926-21189031)
chr7 (1-51)||(27737366-27737416)
chr7 (1-51)||(31899571-31899621)
chr7 (121-225)||(45846766-45846871)
chr7 (126-225)||(15095638-15095738)
chr7 (119-225)||(26355195-26355302)
chr7 (119-225)||(26357647-26357754)
chr7 (1-51)||(688486-688536)
chr7 (1-51)||(9144445-9144495)
chr7 (1-51)||(11498778-11498827)
chr7 (1-51)||(17169480-17169530)
chr7 (119-225)||(11392517-11392623)
chr7 (121-219)||(15081169-15081268)
chr7 (119-225)||(27217701-27217808)
[»] scaffold0529 (1 HSPs)
scaffold0529 (119-225)||(4110-4216)
[»] scaffold0780 (1 HSPs)
scaffold0780 (59-225)||(2472-2638)
[»] scaffold0379 (2 HSPs)
scaffold0379 (89-225)||(3894-4031)
scaffold0379 (54-225)||(13888-14060)
[»] scaffold0153 (2 HSPs)
scaffold0153 (132-225)||(5255-5348)
scaffold0153 (132-225)||(12275-12368)
[»] scaffold0074 (1 HSPs)
scaffold0074 (132-225)||(1896-1989)
[»] scaffold0032 (1 HSPs)
scaffold0032 (132-225)||(68255-68348)
[»] scaffold0395 (2 HSPs)
scaffold0395 (132-221)||(11847-11936)
scaffold0395 (54-104)||(7864-7914)
[»] chr1 (22 HSPs)
chr1 (132-221)||(21995669-21995758)
chr1 (122-225)||(22350663-22350767)
chr1 (151-225)||(21708126-21708200)
chr1 (151-225)||(21712669-21712743)
chr1 (121-225)||(9044519-9044624)
chr1 (121-225)||(16274574-16274679)
chr1 (121-225)||(40129627-40129732)
chr1 (1-51)||(10697734-10697784)
chr1 (1-51)||(10702623-10702673)
chr1 (121-225)||(22050351-22050456)
chr1 (121-225)||(22122168-22122273)
chr1 (121-225)||(41230941-41231046)
chr1 (4-51)||(47135156-47135203)
chr1 (163-225)||(51476981-51477044)
chr1 (1-51)||(1367737-1367787)
chr1 (1-51)||(4890554-4890604)
chr1 (1-51)||(17364186-17364236)
chr1 (1-51)||(29187883-29187933)
chr1 (1-51)||(33360156-33360206)
chr1 (1-51)||(52306520-52306570)
chr1 (11-51)||(41832868-41832908)
chr1 (11-51)||(52524419-52524459)
[»] scaffold0151 (2 HSPs)
scaffold0151 (54-225)||(30989-31159)
scaffold0151 (121-225)||(36600-36705)
[»] scaffold0174 (1 HSPs)
scaffold0174 (132-223)||(13595-13686)
[»] scaffold0877 (1 HSPs)
scaffold0877 (59-225)||(1172-1339)
[»] scaffold0577 (1 HSPs)
scaffold0577 (123-225)||(9008-9110)
[»] scaffold1792 (1 HSPs)
scaffold1792 (121-225)||(1094-1199)
[»] scaffold0535 (1 HSPs)
scaffold0535 (121-225)||(7520-7625)
[»] scaffold0319 (1 HSPs)
scaffold0319 (121-225)||(6057-6162)
[»] scaffold0230 (2 HSPs)
scaffold0230 (121-225)||(22701-22806)
scaffold0230 (121-223)||(20527-20630)
[»] scaffold0023 (1 HSPs)
scaffold0023 (121-225)||(16761-16866)
[»] scaffold0686 (1 HSPs)
scaffold0686 (132-225)||(1397-1489)
[»] scaffold0439 (1 HSPs)
scaffold0439 (126-185)||(12345-12405)
[»] scaffold0759 (1 HSPs)
scaffold0759 (1-51)||(5495-5545)
[»] scaffold0711 (1 HSPs)
scaffold0711 (121-225)||(6898-7003)
[»] scaffold0574 (1 HSPs)
scaffold0574 (121-225)||(7187-7292)
[»] scaffold0494 (1 HSPs)
scaffold0494 (121-225)||(37-142)
[»] scaffold0149 (1 HSPs)
scaffold0149 (121-225)||(34232-34337)
[»] scaffold0040 (1 HSPs)
scaffold0040 (121-225)||(20580-20685)
[»] scaffold0035 (1 HSPs)
scaffold0035 (121-225)||(107211-107316)
[»] scaffold0019 (1 HSPs)
scaffold0019 (121-225)||(21908-22013)
[»] scaffold0016 (2 HSPs)
scaffold0016 (121-225)||(185005-185110)
scaffold0016 (161-225)||(118756-118820)
[»] scaffold0007 (1 HSPs)
scaffold0007 (122-225)||(158823-158927)
[»] scaffold0308 (1 HSPs)
scaffold0308 (119-225)||(13384-13491)
[»] scaffold0716 (1 HSPs)
scaffold0716 (121-225)||(5430-5535)
[»] scaffold0322 (1 HSPs)
scaffold0322 (121-225)||(18673-18778)
[»] scaffold0317 (1 HSPs)
scaffold0317 (121-225)||(6258-6363)
[»] scaffold0306 (1 HSPs)
scaffold0306 (121-225)||(10661-10766)
[»] scaffold0191 (1 HSPs)
scaffold0191 (121-225)||(3556-3661)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-51)||(20162-20212)
[»] scaffold0043 (1 HSPs)
scaffold0043 (121-225)||(10720-10825)
[»] scaffold0042 (1 HSPs)
scaffold0042 (121-225)||(43169-43274)
[»] scaffold0180 (1 HSPs)
scaffold0180 (122-225)||(28330-28434)
[»] scaffold0175 (1 HSPs)
scaffold0175 (150-225)||(8618-8693)
[»] scaffold0145 (1 HSPs)
scaffold0145 (132-171)||(10694-10733)
[»] scaffold0278 (1 HSPs)
scaffold0278 (121-221)||(8668-8769)
[»] scaffold0254 (1 HSPs)
scaffold0254 (119-225)||(21590-21698)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-51)||(12223-12273)
[»] scaffold0063 (1 HSPs)
scaffold0063 (119-225)||(38953-39061)
[»] scaffold0031 (1 HSPs)
scaffold0031 (119-225)||(56221-56329)
[»] scaffold0028 (6 HSPs)
scaffold0028 (119-225)||(135052-135160)
scaffold0028 (119-225)||(137521-137629)
scaffold0028 (119-225)||(139990-140098)
scaffold0028 (119-225)||(142459-142567)
scaffold0028 (119-225)||(144928-145036)
scaffold0028 (122-225)||(3053-3157)
[»] scaffold0021 (1 HSPs)
scaffold0021 (121-225)||(562-667)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-51)||(225859-225909)
[»] scaffold0819 (1 HSPs)
scaffold0819 (161-225)||(5352-5417)
[»] scaffold0297 (1 HSPs)
scaffold0297 (119-225)||(2919-3025)
[»] scaffold0008 (1 HSPs)
scaffold0008 (122-225)||(135505-135609)


Alignment Details
Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 19616666 - 19616470
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaaagaggtatgtacacaatttctatactaattcaacatgtttccatcatct 100  Q
    ||||||||| ||||||||   | | |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  19616666 aaaaataaagaaaagattttcaacgtgagttgaaa-gaggtgtttgtgaaaagaggtatgtacacagtttctatactaattcaacatgtttcaatcatct 19616568  T
Q  101 aatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaatt 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19616567 aatcgattaattctccaattttaaccctaattctcaaattctaaaacttcaacttacaaccatgttaaattcaatttcagaatcacatactcagaatt 19616470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 26832596 - 26832670
Alignment:
Q  149 tcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacc 223  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||| ||||| |||| || ||||||||||    
T  26832596 tcaacctacaaccatgttaaattcatcttcagaatcacatacttagaattattgaaggttactcccacccttacc 26832670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 24473810 - 24473915
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  24473810 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 24473908  T
Q  219 ttacctt 225  Q
    |||||||    
T  24473909 ttacctt 24473915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 21405704 - 21405629
Alignment:
Q  150 caacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||| |||||| ||||||||||||||| |||||||| |||||||||||| || || ||||||||||||||||||||    
T  21405704 caacccacaacc-tgttaaattcaattttcagaatcatatactcagaattattaaaggttagtctcacccttacctt 21405629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 2154058 - 2153953
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  2154058 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 2153960  T
Q  219 ttacctt 225  Q
    |||||||    
T  2153959 ttacctt 2153953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 17516396 - 17516291
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  17516396 ttaaccctaattctcaaattctcaaaaaataaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 17516298  T
Q  219 ttacctt 225  Q
    |||||||    
T  17516297 ttacctt 17516291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 29330711 - 29330814
Alignment:
Q  123 aaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccctt 220  Q
    |||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||||    
T  29330711 aaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 29330809  T
Q  221 acctt 225  Q
    |||||    
T  29330810 acctt 29330814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 21914556 - 21914493
Alignment:
Q  163 tgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||| |||||| |||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  21914556 tgttaaatccaattttcagaattacatactcagaattattgaaggttagtcccacccttacctt 21914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12421925 - 12421975
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||  ||||||||||||||||||||||||||||||    
T  12421925 aaaaataaagaaaaggttcacagcatgagttgaaaagaggtgtttgtgaaa 12421975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 20917273 - 20917168
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  20917273 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 20917175  T
Q  219 ttacctt 225  Q
    |||||||    
T  20917174 ttacctt 20917168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25698301 - 25698351
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  25698301 aaaaataaagaaaaggttccaagcgtgagttgaaaagaggtgtttgtgaaa 25698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 32028761 - 32028866
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | || ||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||| ||    
T  32028761 ttaaccctaattctcaaattctcaaaaactaaaactacaac-atgttaaatacaattttcagaatcataaactcaagattattgaatgttagtctcatcc 32028859  T
Q  219 ttacctt 225  Q
    |||||||    
T  32028860 ttacctt 32028866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33708602 - 33708652
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||| | ||| ||||||||||||||||||||||||||    
T  33708602 aaaaataaagaaaagatttccagcgtgagttgaaaagaggtgtttgtgaaa 33708652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33709157 - 33709207
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  33709157 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 33709207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 38620275 - 38620383
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||||||||||||  |||| |  ||||||||| |||||||||| ||| |||||||||||   ||| |  ||| ||||| ||||||||||    
T  38620275 ttttaaccctaattctcaaattctcaaaaactaaaacctacaa-catgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtctca 38620373  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  38620374 cccttacctt 38620383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 17876179 - 17876251
Alignment:
Q  150 caacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttac 222  Q
    |||||||| ||| |||||||| |||||| |||||||| |||||||||||| ||||| |||||| ||||||||||    
T  17876179 caacctaccacc-tgttaaatccaattttcagaatcatatactcagaattattgaaggttagtttcacccttac 17876251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 21554374 - 21554304
Alignment:
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||| |||||||| || ||||||||| || |||||||||||  |||| ||||||| ||||||||||||    
T  21554374 ctacaacc-tgttaaatccagtttcagaattacgtactcagaattactgaaggttagtcccacccttacctt 21554304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 21557024 - 21556950
Alignment:
Q  150 caacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||| || |||||  | ||||||||| ||||| ||||||||  |||| ||||||||||||||||||||    
T  21557024 caacctacaacc-tgataaatctagtttcagaattacatattcagaattactgaaggttagtctcacccttacctt 21556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17643002 - 17643052
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| ||||  |||| ||||||||||||||||||||||||    
T  17643002 aaaaataaagaaaaggttcccggcataagttgaaaagaggtgtttgtgaaa 17643052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34716092 - 34716042
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  34716092 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 34716042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 10774730 - 10774665
Alignment:
Q  161 catgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||||||||||||    
T  10774730 catgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctt 10774665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 10513835 - 10513875
Alignment:
Q  11 aaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||| |||| ||| ||||||||||||||||||||||||||    
T  10513835 aaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 10513875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 55821 - 55992
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| ||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |||    
T  55821 aggtttgtacacaatttctacatcaattcaacatgtttccatcatctaatcggttaattctccaattttaaccctaattctcaaattctaaaactttaac 55920  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  55921 ctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtctcacccttacctt 55992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 10933 - 10763
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| ||||||||||||||| |  ||||||||| ||||||||||||||||| || ||||  | | ||||||||||||||| |||||| ||||| ||||||    
T  10933 aggtctgtacacaatttctacatcaattcaacaggtttccatcatctaatc-atcaatttacaacttttaaccctaattcccaaattataaaacttcaac 10835  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  10834 ctacaaccatgttaaattcaatttcagaatcacatactcataattattgaaggttagtcccacccttacctt 10763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 22375947 - 22375801
Alignment:
Q  78 aattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaattt 177  Q
    |||||||||  ||| |||||||||||| || |||||   | |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22375947 aattcaacagtttttcatcatctaatc-atcaattcctcacttttaaccctaattctcaaattctaaaactccaacctacaaccatgttaaattcaattt 22375849  T
Q  178 cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  22375848 cagaatcacatactcagaattattgaaggttagtcccacccttacctt 22375801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 27572230 - 27572123
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcaca-tactcagaattgttgaaagttagtctcacc 217  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | |  ||| ||||||   ||||||||||||||||    
T  27572230 ttttaaccctaattctcaaattctaaaactttaacctacaaccatgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacc 27572131  T
Q  218 cttacctt 225  Q
    ||||||||    
T  27572130 cttacctt 27572123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 20733338 - 20733245
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  ||||||||||||||||||||||| |  |||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  20733338 tctcaaattctaaaacctcaacctacaaccatgttaaatttatcttcagaatcacatactcaaaattattgaaggttagtctcacccttacctt 20733245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 27852164 - 27852257
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||| |||||  ||||| ||||||| ||||||||||||    
T  27852164 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatacttagaatgattgaaggttagtcccacccttacctt 27852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 28103535 - 28103449
Alignment:
Q  139 ttctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||  |||||| ||||||||||||    
T  28103535 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctt 28103449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 16966647 - 16966813
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| |||||||| |||||| |  |||||||||  ||||||||||||| || || ||||    | ||||||  ||||| | |||||||||||| | ||||    
T  16966647 aggtctgtacacagtttctacatcaattcaacagttttccatcatctagtc-atcaatttatcacttttaaaactaatccccaaattctaaaactacaac 16966745  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccctta 221  Q
    |||||||||||||||||||||||||||| ||||||||| |  ||| || || ||||||||||||||||    
T  16966746 ctacaaccatgttaaattcaatttcagagtcacatacttaagattattaaaggttagtctcaccctta 16966813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 16246176 - 16246269
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||| |||||||||||||||||||||||| ||||| | | ||||| |||| ||||| ||||||| ||||||||||||    
T  16246176 tctcaaattctaaaaactcaatctacaaccatgttaaattcaattttagaattagaaactcataattattgaaggttagtcccacccttacctt 16246269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 31629967 - 31629862
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  31629967 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 31629869  T
Q  219 ttacctt 225  Q
    |||||||    
T  31629868 ttacctt 31629862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 17882818 - 17882711
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||    
T  17882818 ttttaaccctaattcccaaattctcaaaaactaaacctacaac-atgttaaatgcaattttcagaatcatagactcaagattattgaatgttagtctcac 17882720  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  17882719 ccttacctt 17882711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 16198341 - 16198446
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  16198341 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcacaccc 16198439  T
Q  219 ttacctt 225  Q
    |||||||    
T  16198440 ttacctt 16198446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 25721041 - 25721146
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  25721041 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 25721139  T
Q  219 ttacctt 225  Q
    |||||||    
T  25721140 ttacctt 25721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 34963916 - 34964021
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  34963916 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 34964014  T
Q  219 ttacctt 225  Q
    |||||||    
T  34964015 ttacctt 34964021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 19401045 - 19401145
Alignment:
Q  126 cctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacc 223  Q
    ||||||||||||||||  |||| | |||||||||||| ||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||||||||||    
T  19401045 cctaattctcaaattcccaaaactacaacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacc 19401143  T
Q  224 tt 225  Q
    ||    
T  19401144 tt 19401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 25753385 - 25753489
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    ||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||||||    
T  25753385 taaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccct 25753483  T
Q  220 tacctt 225  Q
    ||||||    
T  25753484 tacctt 25753489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 25755555 - 25755659
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    ||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||||||    
T  25755555 taaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccct 25755653  T
Q  220 tacctt 225  Q
    ||||||    
T  25755654 tacctt 25755659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9980843 - 9980893
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  9980843 aaaaataaagaaaaggttccaagcgtgagttgaaaagaggtgtttgtgaaa 9980893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 17027970 - 17027865
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||| ||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  17027970 ttaaccctaattctcagattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 17027872  T
Q  219 ttacctt 225  Q
    |||||||    
T  17027871 ttacctt 17027865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 22783067 - 22783175
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||    
T  22783067 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccca 22783165  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  22783166 cccttacctt 22783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 23992965 - 23993070
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||| | | |||||  ||| ||||| ||||||| |||||    
T  23992965 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaattatagactcaagattattgaatgttagtcccaccc 23993063  T
Q  219 ttacctt 225  Q
    |||||||    
T  23993064 ttacctt 23993070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 25535951 - 25536056
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||| ||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  25535951 ttaaccataattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 25536049  T
Q  219 ttacctt 225  Q
    |||||||    
T  25536050 ttacctt 25536056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 25689369 - 25689474
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||| |||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  25689369 ttaactctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 25689467  T
Q  219 ttacctt 225  Q
    |||||||    
T  25689468 ttacctt 25689474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28193398 - 28193348
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||||||| ||||||||||||||| ||||||||||    
T  28193398 aaaaataaagaaaaggttcctagcgtgagttgaaaagaggagtttgtgaaa 28193348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 30676145 - 30676040
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||| |||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||| | |||||||||||||    
T  30676145 ttaactctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgcatgttagtctcaccc 30676047  T
Q  219 ttacctt 225  Q
    |||||||    
T  30676046 ttacctt 30676040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 8055870 - 8055977
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  | ||||||||| |||||||||| ||| |||| |||||| | |||||  ||| ||||| ||||||| |||    
T  8055870 ttttaaccctaattcccaaattctcaaaaactaaacctacaa-catgttaaatacaattttcggaatcatagactcaagattattgaatgttagtcccac 8055968  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  8055969 ccttacctt 8055977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1219028 - 1218978
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  1219028 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 1218978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24444431 - 24444381
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  24444431 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 24444381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25529742 - 25529692
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||    
T  25529742 aaaaataaagaaaagcttcccagcgtgagttgaaaagaggtgcttgtgaaa 25529692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 26923768 - 26923660
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||||||| |||||||||||   ||| |  ||| ||||| ||||||| ||    
T  26923768 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaattcaattttcagaatcaatgacttaagattattgaatgttagtccca 26923670  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  26923669 cccttacctt 26923660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35133676 - 35133626
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||  ||||||||||||||||||||||||||    
T  35133676 aaaaataaagaaaaggttcccagtgtgagttgaaaagaggtgtttgtgaaa 35133626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 19005924 - 19005989
Alignment:
Q  161 catgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||||||||||||||||    
T  19005924 catgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 19005989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 18259238 - 18259175
Alignment:
Q  162 atgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||| ||||||| |||||||| || ||||||||| ||||| ||||||| ||||||||||||    
T  18259238 atgttaaactcaattttcagaatca-atgctcagaattattgaaggttagtcccacccttacctt 18259175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 34853672 - 34853632
Alignment:
Q  11 aaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||| |||| ||| ||||||||||||||||||||||||||    
T  34853672 aaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 34853632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 27996672 - 27996842
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| ||||||||||||||| | ||||| ||||  |||||||||||||||| || |||||   | ||||||||||||||| |||||||||||| | |||     
T  27996672 aggtctgtacacaatttctacattaatttaacagttttccatcatctaatc-atcaattcatcacttttaaccctaattcccaaattctaaaactacaat 27996770  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  27996771 ctacaaccatgttaaattcattttcagaatcacatactcagaattattgaaggttagtcccacccttacctt 27996842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 19739619 - 19739789
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| |||||||| |||||| |  |||||||||  |||||| ||||||||| || |||||   | ||||||||||||||| |||||||||||| | ||||    
T  19739619 aggtctgtacacagtttctacatcaattcaacaattttccaacatctaatc-atcaattcatcacttttaaccctaattcccaaattctaaaactacaac 19739717  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||| |||||||||||  |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  19739718 ctacaaccgtgttaaattcatattcataatcacatactcagaattattgaaggttagtctcacccttacctt 19739789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 26014229 - 26014335
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||||||||||||  ||| ||||| ||||||| |||||    
T  26014229 ttttaaccctaattctcaaatcctaaaaactcaacctacaaccatgttaaattcaatttcaaaatcacatactcaagattattgaaggttagtcccaccc 26014328  T
Q  219 ttacctt 225  Q
    |||||||    
T  26014329 ttacctt 26014335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10057619 - 10057712
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  10057619 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctt 10057712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 13591240 - 13591070
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    ||||||||||||| |||||  |  || ||||||  |||| ||||||||||| || |||||   | ||||||||||||||||||||||||||||  |||||    
T  13591240 aggtatgtacacagtttctccatcaactcaacagttttctatcatctaatc-atcaattcctcacttttaaccctaattctcaaattctaaaacctcaac 13591142  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
     ||||||||||||||||||||| ||||| |||||||||||  ||| || || ||||||| ||||||||||||    
T  13591141 atacaaccatgttaaattcaatatcagattcacatactcaagattatttaaggttagtcccacccttacctt 13591070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 50161031 - 50161089
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaattt 177  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  50161031 ttttaaccctaattctcaaattctaaaaactcaacctacaaccatgtaaaattcaattt 50161089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 14970133 - 14970028
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||| ||| ||||||||| |||||| |||||||||| |||||  ||| ||||| |||||||||||||    
T  14970133 ttaaccctaattctcaaattctcaaaaactaaacctataac-atgttaaatacaattttcagaatcacagactcaagattattgaatgttagtctcaccc 14970035  T
Q  219 ttacctt 225  Q
    |||||||    
T  14970034 ttacctt 14970028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 363109 - 363214
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  363109 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 363207  T
Q  219 ttacctt 225  Q
    |||||||    
T  363208 ttacctt 363214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 3515743 - 3515848
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||| | ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  3515743 ttaaccctaattctcaaattatcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 3515841  T
Q  219 ttacctt 225  Q
    |||||||    
T  3515842 ttacctt 3515848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47559270 - 47559320
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  47559270 aaaaataaagaaaagattcccagcgtgagttgaaaagaggtgtttgtgaaa 47559320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 3485808 - 3485913
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||||||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | ||| |  ||| ||||| ||||||||||    
T  3485808 ttttaaccctaattctcaaattctcaaaaactaaaacctacaa-catgttaaatccaattttcagaatcatagacttaagattattgaatgttagtctca 3485906  T
Q  216 cccttac 222  Q
    |||||||    
T  3485907 cccttac 3485913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5753467 - 5753417
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||  ||| ||||||||||||||||||||||||||    
T  5753467 aaaaataaagaaaagattctcagcgtgagttgaaaagaggtgtttgtgaaa 5753417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 7640509 - 7640401
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    |||||||| |||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||||||    
T  7640509 ttttaaccttaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctca 7640411  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  7640410 cccttacctt 7640401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 18214630 - 18214525
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||| |    
T  18214630 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaatttgcagaatcatagactcaagattattgaatgttagtcccacgc 18214532  T
Q  219 ttacctt 225  Q
    |||||||    
T  18214531 ttacctt 18214525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35715882 - 35715932
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  35715882 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 35715932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39716301 - 39716351
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  39716301 aaaaataaagaaaaggttccaagcgtgagttgaaaagaggtgtttgtgaaa 39716351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 44616130 - 44616238
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | || ||  ||| ||||| ||||||||||    
T  44616130 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagacccaagattattgaatgttagtctca 44616228  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  44616229 cccttacctt 44616238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47559811 - 47559861
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  47559811 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 47559861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 50221661 - 50221553
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||||||||||||  |||| |  ||||||||| |||||||||| ||| |||||||||||   ||| |  ||| ||||| ||||||||||    
T  50221661 ttttaaccctaattctcaaattctcaaaaactaaaacctacaa-catgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtctca 50221563  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  50221562 cccttacctt 50221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 52872508 - 52872403
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| |||| || |||||    
T  52872508 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaatcatagactcaagattattgaatgttaatcccaccc 52872410  T
Q  219 ttacctt 225  Q
    |||||||    
T  52872409 ttacctt 52872403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 12778303 - 12778197
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa--tttcagaatcacatactcagaattgttgaaagttagtctcacc 217  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| |||  ||||||||||| | |||||  ||| ||||| ||||||| ||||    
T  12778303 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaatttttcagaatcatagactcaagattattgaatgttagtcccacc 12778205  T
Q  218 cttacctt 225  Q
    ||| ||||    
T  12778204 cttgcctt 12778197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 15489577 - 15489470
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    |||||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||| | | |||||  ||| ||||| |||| || |||    
T  15489577 ttttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaattatagactcaagattattgaatgttattcccac 15489479  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  15489478 ccttacctt 15489470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 19858348 - 19858454
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt--cagaatcacatactcagaattgttgaaagttagtctcacc 217  Q
    |||||||||||| ||||||||| ||||  | |||||||||| ||||||||| ||||||  |||||||| | |||||  ||| ||||| ||||||| ||||    
T  19858348 ttaaccctaattatcaaattctcaaaaagtaaacctacaac-atgttaaatacaatttttcagaatcatagactcaagattattgaatgttagtcccacc 19858446  T
Q  218 cttacctt 225  Q
    ||||||||    
T  19858447 cttacctt 19858454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 21189127 - 21189084
Alignment:
Q  59 tgtacacaatttctatactaattcaacatgtttccatcatctaa 102  Q
    |||||||| |||||| || |||||||||||||||||||||||||    
T  21189127 tgtacacagtttctacaccaattcaacatgtttccatcatctaa 21189084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 11874 - 11773
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| ||| |||||| ||| ||||||||||| | |||||  ||| ||||| ||||||| |||||    
T  11874 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 11776  T
Q  219 tta 221  Q
    |||    
T  11775 tta 11773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 578178 - 578228
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||||  | ||||||||||||| ||||||||||||    
T  578178 aaaaataaagaaaagattcctgacgtgagttgaaaagacgtgtttgtgaaa 578228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 18238935 - 18238827
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaatttc-agaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| ||||||| |||||||   ||| |  ||| ||||| ||||||||||    
T  18238935 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatccaatttccagaatcaatgacttaagattattgaatgttagtctca 18238837  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  18238836 cccttacctt 18238827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 19243542 - 19243650
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||||||||||||  |||| |  ||||||||| |||||||||| ||| |||||||||||   ||| |  ||| ||||| ||||||| ||    
T  19243542 ttttaaccctaattctcaaattctcaaaaactaaaacctacaa-catgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccca 19243640  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  19243641 cccttacctt 19243650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 24834194 - 24834024
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| |||||||| |||||| |  ||||||||||||||| | | | |||| || |||||||| |||||||||||||||| ||||||||||||| | ||||    
T  24834194 aggtctgtacacagtttctacatcaattcaacatgtttcta-cttttaattgactaattctccaattttaaccctaattatcaaattctaaaactccaac 24834096  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  24834095 ctacaaccatgttaaattcaatttcggaatcacatactcagaattattgatggttagtcccacccttacctt 24834024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 24792877 - 24792760
Alignment:
Q  108 taattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagt 207  Q
    |||||||| |||||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  24792877 taattctccaattttaaccctaattctcaaattctaagactccaacctacaaccatgttaaattcagtttcagaatcacatactcagaattattgaaggt 24792778  T
Q  208 tagtctcacccttacctt 225  Q
    ||||| ||||||||||||    
T  24792777 tagtcccacccttacctt 24792760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 27473414 - 27473503
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccctta 221  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  27473414 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattgaaggttagtcccaccctta 27473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 34858286 - 34858193
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||| ||||||||||||||||  |||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  34858286 tctcaaattctaaaacctcaacctaaaaccatgttaaattcatcttcagaatcacatactcaaaattattgaaggttagtcccacccttacctt 34858193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 34873348 - 34873255
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||| ||||||||||||||||  |||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  34873348 tctcaaattctaaaacctcaacctaaaaccatgttaaattcatcttcagaatcacatactcaaaattattgaaggttagtcccacccttacctt 34873255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 20916265 - 20916355
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttac 222  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||| |||||||||||||||||| ||||| ||||||  |||||||||    
T  20916265 tctcaaattctaaaacatcaacctacaaccatgttaaattcatcttcaaaatcacatactcagaattattgaaggttagttccacccttac 20916355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 45027326 - 45027221
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  45027326 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 45027228  T
Q  219 ttacctt 225  Q
    |||||||    
T  45027227 ttacctt 45027221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 6726783 - 6726888
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  6726783 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 6726881  T
Q  219 ttacctt 225  Q
    |||||||    
T  6726882 ttacctt 6726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 22106201 - 22106306
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  22106201 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 22106299  T
Q  219 ttacctt 225  Q
    |||||||    
T  22106300 ttacctt 22106306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 23932196 - 23932301
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  23932196 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 23932294  T
Q  219 ttacctt 225  Q
    |||||||    
T  23932295 ttacctt 23932301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 32214356 - 32214251
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  32214356 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 32214258  T
Q  219 ttacctt 225  Q
    |||||||    
T  32214257 ttacctt 32214251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 18388295 - 18388191
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    ||||| |||||| |||||||  |||| | |||||||||||  |||||||| |||||| |||||||| |||||||| ||| ||||| ||||||||||||||    
T  18388295 taaccataattcccaaattcccaaaactacaacctacaact-tgttaaatccaattttcagaatcatatactcaggattattgaaggttagtctcaccct 18388197  T
Q  220 tacctt 225  Q
    ||||||    
T  18388196 tacctt 18388191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 19358879 - 19358942
Alignment:
Q  163 tgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||| |||||||| |||||||||||| || || ||||||| ||||||||||||    
T  19358879 tgttaaattcaattttcagaatcatatactcagaattattaaaggttagtcccacccttacctt 19358942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9920502 - 9920552
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  9920502 aaaaataaagaaaagattcccggcgtgagttgaaaagaggtgtttgtgaaa 9920552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10049773 - 10049823
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  10049773 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 10049823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 24528973 - 24528868
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||  ||||||| | |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  24528973 ttaaccctaattctcaaattctcaaaaagtaaacctacaat-atgttaattacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 24528875  T
Q  219 ttacctt 225  Q
    |||||||    
T  24528874 ttacctt 24528868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 24897518 - 24897411
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||    
T  24897518 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccca 24897420  T
Q  216 cccttacct 224  Q
    |||||||||    
T  24897419 cccttacct 24897411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 24900001 - 24899894
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||    
T  24900001 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccca 24899903  T
Q  216 cccttacct 224  Q
    |||||||||    
T  24899902 cccttacct 24899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 24902478 - 24902371
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||    
T  24902478 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccca 24902380  T
Q  216 cccttacct 224  Q
    |||||||||    
T  24902379 cccttacct 24902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 24904955 - 24904848
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||    
T  24904955 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccca 24904857  T
Q  216 cccttacct 224  Q
    |||||||||    
T  24904856 cccttacct 24904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 24907430 - 24907323
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||    
T  24907430 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccca 24907332  T
Q  216 cccttacct 224  Q
    |||||||||    
T  24907331 cccttacct 24907323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 22259990 - 22260089
Alignment:
Q  126 cctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacct 224  Q
    |||||||| |||||||  ||| | |||||||||||| ||||||||||||||| ||||||||   ||| ||||||  |||||||||||| ||| |||||||    
T  22259990 cctaattcccaaattcctaaactacaacctacaacc-tgttaaattcaattttcagaatcatgcacttagaattagtgaaagttagtcacactcttacct 22260088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4292425 - 4292475
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  4292425 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 4292475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9545404 - 9545454
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||  ||| ||||||||||||||||||||||||||    
T  9545404 aaaaataaagaaaaggttcaaagcgtgagttgaaaagaggtgtttgtgaaa 9545454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 21154241 - 21154136
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| ||| |||||| ||| ||||||||||| | |||||  ||| ||||| ||||||| ||| |    
T  21154241 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccactc 21154143  T
Q  219 ttacctt 225  Q
    |||||||    
T  21154142 ttacctt 21154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 23706452 - 23706347
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||| | ||||  | ||| |||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  23706452 ttaaccctaattctcaaattatcaaaaactaaacatacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 23706354  T
Q  219 ttacctt 225  Q
    |||||||    
T  23706353 ttacctt 23706347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24521294 - 24521244
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||  ||| ||||||||| ||||||||||||||||    
T  24521294 aaaaataaagaaaagattctcagcgtgagttgaacagaggtgtttgtgaaa 24521244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 24671761 - 24671866
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| ||| |||||| ||| ||| ||||||| | |||||  ||| ||||| ||||||| |||||    
T  24671761 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catattaaatacaatttttagaatcatagactcaagattattgaatgttagtcccaccc 24671859  T
Q  219 ttacctt 225  Q
    |||||||    
T  24671860 ttacctt 24671866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 24918876 - 24918981
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||| |||||  ||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  24918876 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atggtaaatagaattttcagaatcatagactcaagattattgaatgttagtcccaccc 24918974  T
Q  219 ttacctt 225  Q
    |||||||    
T  24918975 ttacctt 24918981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 26508696 - 26508804
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaatttc-agaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| ||||||| |||||||   ||| |  ||| ||||| ||||||||||    
T  26508696 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatccaatttccagaatcaatgacttaagattattgaatgttagtctca 26508794  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  26508795 cccttacctt 26508804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28607729 - 28607679
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  ||| |||| ||||||||||||||||||||||||||    
T  28607729 aaaaataaagaaaatgttcttagcttgagttgaaaagaggtgtttgtgaaa 28607679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 39683155 - 39683263
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||||||| |||||||||||   ||| |  ||| ||||| ||||||| ||    
T  39683155 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaattcaattttcagaatcaatgacttaagattattgaatgttagtccca 39683253  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  39683254 cccttacctt 39683263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 44072548 - 44072608
Alignment:
Q  166 taaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||| || ||||| | ||| ||||||  |||||||||||||||||||||||||    
T  44072548 taaattcaattttcaaaatcatacacttagaattagtgaaagttagtctcacccttacctt 44072608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 498939 - 499109
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| |||||||| |||||| |  |||||||||  | |||||||||||||| || |||||  || ||||||||||||||| |||||||||||| | ||||    
T  498939 aggtctgtacacagtttctacatcaattcaacagttctccatcatctaatc-atcaattcattacttttaaccctaattcccaaattctaaaactacaac 499037  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  499038 ctacaaccatgttaaattcattttcagaatcacatactcaaaattattgaaggttagtcccacccttacctt 499109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 501800 - 501905
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| ||||||  ||| |    
T  501800 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaatcatagactcaagattattgaatgttagtaccacac 501898  T
Q  219 ttacctt 225  Q
    |||||||    
T  501899 ttacctt 501905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 46752051 - 46752157
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  46752051 ttttaaccctaattctcaaatcctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtcccaccc 46752150  T
Q  219 ttacctt 225  Q
    |||||||    
T  46752151 ttacctt 46752157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 6804984 - 6804893
Alignment:
Q  134 tcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  6804984 tcaaattctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtctcacccttacctt 6804893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 52988952 - 52988859
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  52988952 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtctcacccttacctt 52988859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 14967142 - 14967235
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||   |||||||||||| ||||||||| ||||| ||||||| | ||||||||||    
T  14967142 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcctcagaatcacattctcagaattattgaaggttagtcccccccttacctt 14967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 38961264 - 38961158
Alignment:
Q  121 ttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacc 217  Q
    ||||||||||||||||||||||  ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||||||||    
T  38961264 ttaaccctaattctcaaattctcaaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacc 38961166  T
Q  218 cttacctt 225  Q
    ||||||||    
T  38961165 cttacctt 38961158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 31223948 - 31223874
Alignment:
Q  123 aaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaatt 198  Q
    ||||||||||| ||||||| |||| | |||||||||||| |||||||| || ||||||||| ||||||||||||||    
T  31223948 aaccctaattcccaaattccaaaactacaacctacaacc-tgttaaatccagtttcagaattacatactcagaatt 31223874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 12119291 - 12119186
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  12119291 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 12119193  T
Q  219 ttacctt 225  Q
    |||||||    
T  12119192 ttacctt 12119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 13937400 - 13937295
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  13937400 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 13937302  T
Q  219 ttacctt 225  Q
    |||||||    
T  13937301 ttacctt 13937295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 16282184 - 16282079
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  16282184 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 16282086  T
Q  219 ttacctt 225  Q
    |||||||    
T  16282085 ttacctt 16282079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19894683 - 19894733
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  19894683 aaaaataaagaaaagattcccagcgtgagttgaaaagaggtgtttgtgaaa 19894733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 41124675 - 41124780
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  41124675 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 41124773  T
Q  219 ttacctt 225  Q
    |||||||    
T  41124774 ttacctt 41124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48522681 - 48522731
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  48522681 aaaaataaagaaaaggttcccagcatgagttgaaaagaggtgtttgtgaaa 48522731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 13522292 - 13522243
Alignment:
Q  137 aattctaaaattt-caacctacaaccatgttaaattcaatttcagaatca 185  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  13522292 aattctgaaatttacaacctacaaccatgttaaattcaatttcagaatca 13522243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 40957216 - 40957277
Alignment:
Q  161 catgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttac 222  Q
    ||||||||||||||||| ||||||| |||||||||||| || || ||||||||||| |||||    
T  40957216 catgttaaattcaattttagaatcatatactcagaattattaaaggttagtctcactcttac 40957277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8394033 - 8393983
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  8394033 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 8393983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 8899559 - 8899664
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || ||| || |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  8899559 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattatatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 8899657  T
Q  219 ttacctt 225  Q
    |||||||    
T  8899658 ttacctt 8899664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11955097 - 11955147
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  11955097 aaaaataaagaaaagattcccggcgtgagttgaaaagaggtgtttgtgaaa 11955147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18683505 - 18683455
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||  ||| ||||||||||||||||||||||||||    
T  18683505 aaaaataaagaaaagattctcagcgtgagttgaaaagaggtgtttgtgaaa 18683455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40831512 - 40831562
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  40831512 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 40831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 45577764 - 45577656
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| ||||||||  |||| |  ||| ||||| ||||||||||    
T  45577764 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatccaattttcagaatcaattacttaagattattgaatgttagtctca 45577666  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  45577665 cccttacctt 45577656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 46822997 - 46823102
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| | |||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  46822997 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacgattttcagaatcatagactcaagattattgaatgttagtcccaccc 46823095  T
Q  219 ttacctt 225  Q
    |||||||    
T  46823096 ttacctt 46823102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 55318730 - 55318625
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||| |||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  55318730 ttaaccctaattctcaaattctcaaaaactaaacttacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 55318632  T
Q  219 ttacctt 225  Q
    |||||||    
T  55318631 ttacctt 55318625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 20629617 - 20629513
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    ||||||||||||||||||||| ||||  | |||||||||  ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| ||||||    
T  20629617 taaccctaattctcaaattctcaaaaactaaacctacaat-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccct 20629519  T
Q  220 tacctt 225  Q
    ||||||    
T  20629518 tacctt 20629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 22758942 - 22758835
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaattt-cagaatcacat-actcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| ||||| || |||  | |||||||||| ||||||||| |||||| |||||| | |  ||| |||||| ||||| |||||||||||    
T  22758942 ttttaaccctaattcccaaatcctcaaaactaaacctacaac-atgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcac 22758844  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  22758843 ccttacctt 22758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8394589 - 8394539
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||||||   ||| ||||||||||||||||||||||||||    
T  8394589 aaaaataaagaaaagattaacagcgtgagttgaaaagaggtgtttgtgaaa 8394539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9563726 - 9563676
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||    
T  9563726 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgcttgtgaaa 9563676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 10379875 - 10379980
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | || ||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  10379875 ttaaccctaattctcaaattctcaaaaactaaatctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 10379973  T
Q  219 ttacctt 225  Q
    |||||||    
T  10379974 ttacctt 10379980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 17444189 - 17444084
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||| ||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  17444189 ttaaccctaattcttaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 17444091  T
Q  219 ttacctt 225  Q
    |||||||    
T  17444090 ttacctt 17444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19895235 - 19895285
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| | | ||||||||||||||||||||||||||    
T  19895235 aaaaataaagaaaaggttcccaacgtgagttgaaaagaggtgtttgtgaaa 19895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 24514219 - 24514324
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||| ||||||| ||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  24514219 ttaatcctaattatcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 24514317  T
Q  219 ttacctt 225  Q
    |||||||    
T  24514318 ttacctt 24514324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 55477331 - 55477439
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||| ||||||||   ||| |  ||| ||||| ||||||||||    
T  55477331 ttttaaccctaattcccaaattctcaaaaactaaaacctacaac-atgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtctca 55477429  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  55477430 cccttacctt 55477439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 49968960 - 49968860
Alignment:
Q  126 cctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacc 223  Q
    |||||||| |||||||| |||| | ||| |||||||| ||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||| ||||||    
T  49968960 cctaattcccaaattctcaaaactacaagctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccactcttacc 49968862  T
Q  224 tt 225  Q
    ||    
T  49968861 tt 49968860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 13660991 - 13660855
Alignment:
Q  89 tttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaa-tttcagaatcaca 187  Q
    |||||||||||||||| || |||||   | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13660991 tttccatcatctaatc-atcaattcatcactttgaaccctaattctcaaattctaaaacttcaacctacaaccatgttaaattcaattttcagaatcaca 13660893  T
Q  188 tactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||| ||||| ||||||| ||||||||||||    
T  13660892 tactcagaattattgaaggttagtcccacccttacctt 13660855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 13719634 - 13719498
Alignment:
Q  89 tttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaa-tttcagaatcaca 187  Q
    |||||||||||||||| || |||||   | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13719634 tttccatcatctaatc-atcaattcatcactttgaaccctaattctcaaattctaaaacttcaacctacaaccatgttaaattcaattttcagaatcaca 13719536  T
Q  188 tactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||| ||||| ||||||| ||||||||||||    
T  13719535 tactcagaattattgaaggttagtcccacccttacctt 13719498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 37516488 - 37516658
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| ||||||||||||||| |  |||||||||  |||| ||||||||||| || |||||   | ||||||||||||||||||||||||||||  |||||    
T  37516488 aggtctgtacacaatttctacatcaattcaacaattttctatcatctaatc-atcaattcctcacttttaaccctaattctcaaattctaaaaactcaac 37516586  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||| | | |||||||||||||||||||||||||||||  ||| ||||| ||||||| ||||||||||||    
T  37516587 ctacaatcgttttaaattcaatttcagaatcacatactcaagattattgaaggttagtcccacccttacctt 37516658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 19807488 - 19807395
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  19807488 tctcaaattctaaaacttcaacctacatccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctt 19807395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 22237144 - 22237051
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||| |||  |||||||||||||||||||||||||  |||| |||||||||||||||||| |||||  ||| || ||||||||||||    
T  22237144 tctcaaattctgaaacctcaacctacaaccatgttaaattcatcttcaaaatcacatactcagaattattgaagattactcccacccttacctt 22237051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 1326551 - 1326446
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  1326551 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 1326453  T
Q  219 ttacctt 225  Q
    |||||||    
T  1326452 ttacctt 1326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 15202412 - 15202307
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  15202412 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 15202314  T
Q  219 ttacctt 225  Q
    |||||||    
T  15202313 ttacctt 15202307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 16412741 - 16412636
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  16412741 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 16412643  T
Q  219 ttacctt 225  Q
    |||||||    
T  16412642 ttacctt 16412636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 20463196 - 20463246
Alignment:
Q  175 tttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  20463196 tttcagaatcatatactcagaattattgaaggttagtctcacccttacctt 20463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 32810430 - 32810535
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  32810430 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 32810528  T
Q  219 ttacctt 225  Q
    |||||||    
T  32810529 ttacctt 32810535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 37609828 - 37609723
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatttc-agaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| ||||||  ||||||| | |||||  ||| ||||| |||||||||||||    
T  37609828 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcaccc 37609730  T
Q  219 ttacctt 225  Q
    |||||||    
T  37609729 ttacctt 37609723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 42265614 - 42265510
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    |||||||||||| |||||||  |||| | |||||||||||  ||||||||||||||| |||||||| ||||||||| || || || ||||||| ||||||    
T  42265614 taaccctaattcccaaattcccaaaactacaacctacaact-tgttaaattcaattttcagaatcatatactcagacttattaaaggttagtcccaccct 42265516  T
Q  220 tacctt 225  Q
    ||||||    
T  42265515 tacctt 42265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4020779 - 4020829
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  4020779 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 4020829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12756567 - 12756517
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  12756567 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 12756517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 19897250 - 19897355
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||| |||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  19897250 ttaactctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 19897348  T
Q  219 ttacctt 225  Q
    |||||||    
T  19897349 ttacctt 19897355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 20404015 - 20404120
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatt-tcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||| ||||||| ||||  | |||||||||| ||||||||| ||||| ||||||||| | |||||  ||| ||||| ||||||| |||||    
T  20404015 ttaaccctaattctaaaattctcaaaaactaaacctacaac-atgttaaatacaattatcagaatcatagactcaagattattgaatgttagtcccaccc 20404113  T
Q  219 ttacctt 225  Q
    |||||||    
T  20404114 ttacctt 20404120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 20457414 - 20457519
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| |||||| |||| | |||||  ||| ||||| ||||||| |||||    
T  20457414 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcaggatcatagactcaagattattgaatgttagtcccaccc 20457512  T
Q  219 ttacctt 225  Q
    |||||||    
T  20457513 ttacctt 20457519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 24049346 - 24049451
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| |||||||||  ||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  24049346 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatataattttcagaatcatagactcaagattattgaatgttagtcccaccc 24049444  T
Q  219 ttacctt 225  Q
    |||||||    
T  24049445 ttacctt 24049451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 27471843 - 27471738
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||| ||||| | |||||  ||| ||||| ||||||| |||||    
T  27471843 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccaccc 27471745  T
Q  219 ttacctt 225  Q
    |||||||    
T  27471744 ttacctt 27471738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 32122464 - 32122569
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| ||||||  |||||    
T  32122464 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaatcatagactcaagattattgaatgttagttccaccc 32122562  T
Q  219 ttacctt 225  Q
    |||||||    
T  32122563 ttacctt 32122569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41153071 - 41153021
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||| ||| ||||||||||||||| ||||||||||    
T  41153071 aaaaataaagaaaagattcccagcgtgagttgaaaagaggagtttgtgaaa 41153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44388589 - 44388639
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  44388589 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 44388639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 11361253 - 11361358
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatttc-agaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||| ||||||||||||||| ||||  | |||||||||| ||||||||| ||||||  ||||||| | |||||  ||| ||||| ||||||| |||||    
T  11361253 ttaaccttaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaatttttagaatcatagactcaagattattgaatgttagtcccaccc 11361351  T
Q  219 ttacctt 225  Q
    |||||||    
T  11361352 ttacctt 11361358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 20457993 - 20458043
Alignment:
Q  175 tttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||| ||||| ||||||| |||| ||||| ||||||||||||||||||||    
T  20457993 tttcaaaatcatatactcaaaattattgaaggttagtctcacccttacctt 20458043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 5852612 - 5852508
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    |||||||||||| |||||||| ||||  | |||||||||| ||||||||| | |||| |||||||| | |||||  ||| ||||| ||||||| ||||||    
T  5852612 taaccctaattcccaaattctcaaaaactaaacctacaac-atgttaaatacgattttcagaatcatagactcaagattattgaatgttagtcccaccct 5852514  T
Q  220 tacctt 225  Q
    ||||||    
T  5852513 tacctt 5852508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 3273866 - 3273941
Alignment:
Q  150 caacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||| |||||| ||||||||||||||| |||||||| |||| || |||| || || ||||||| ||||||||||||    
T  3273866 caacccacaacc-tgttaaattcaattttcagaatcatatacacataattattaaaggttagtcccacccttacctt 3273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 22317987 - 22317912
Alignment:
Q  150 caacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||| |||| ||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||||||||||||    
T  22317987 caacctagaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctt 22317912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 30823609 - 30823569
Alignment:
Q  11 aaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||| |||| ||| ||||||||||||||||||||||||||    
T  30823609 aaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 30823569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 38549241 - 38549134
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    |||||| ||||||||||||||||| ||||  | |||| |||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| |||||||  ||    
T  38549241 ttttaagcctaattctcaaattctcaaaaactaaacccacaa-catgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccaac 38549143  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  38549142 ccttacctt 38549134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 12223 - 12116
Alignment:
Q  119 ttttaaccctaat-tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacc 217  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||    
T  12223 ttttaaccctaatctctcaaattctaaaacttcaacctacaaccatgttaaattcgatttcagaatcacatactcagaattattgaaggttagtcccacc 12124  T
Q  218 cttacctt 225  Q
    ||||||||    
T  12123 cttacctt 12116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 22136 - 22227
Alignment:
Q  134 tcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  22136 tcaaattctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtctcacccttacctt 22227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 10103 - 10151
Alignment:
Q  177 tcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  10103 tcagaatcacatactcaaaattattgaaggttagtctcacccttacctt 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 14980817 - 14980671
Alignment:
Q  78 aattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaattt 177  Q
    |||||||||  |||| ||||||||||| || ||||||  | |||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||    
T  14980817 aattcaacagttttctatcatctaatc-atcaattcttcacttttaaccctaattctaaaatcctaaaaactcaacctacaaccatgttaaattcaattt 14980719  T
Q  178 cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||  ||| ||||| ||||||| ||||||||||||    
T  14980718 cagaatcacatactcaagattattgaaggttagtcccacccttacctt 14980671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 15203059 - 15203229
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| |||||||| |||||| |  |||||||||  ||||||||||||||||  | |||||   | |||||||| |||||| |||||||||||| | ||||    
T  15203059 aggtctgtacacagtttctacatcaattcaacagttttccatcatctaatcc-tcaattcatcacttttaaccgtaattcccaaattctaaaactacaac 15203157  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  15203158 ctacaaccatgttaaattcattttcagaatcacatactcataattattgaaggttagtcccacccttacctt 15203229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 15410293 - 15410147
Alignment:
Q  78 aattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaattt 177  Q
    |||||||||  |||| ||||||||||| || ||||||  | |||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||    
T  15410293 aattcaacagttttctatcatctaatc-atcaattcttcacttttaaccctaattctaaaatcctaaaaactcaacctacaaccatgttaaattcaattt 15410195  T
Q  178 cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||  ||| ||||| ||||||| ||||||||||||    
T  15410194 cagaatcacatactcaagattattgaaggttagtcccacccttacctt 15410147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 11085478 - 11085571
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  11085478 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctt 11085571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 9724973 - 9724803
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    ||||||||||||| |||||  |  || ||||||  |||| ||||||||||| || |||||   | ||||||||||||||||||||||||||||  |||||    
T  9724973 aggtatgtacacagtttctccatcaactcaacagttttctatcatctaatc-atcaattcctcacttttaaccctaattctcaaattctaaaacctcaac 9724875  T
Q  154 ctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
     ||||||||||||||||||||| ||||| |||||||||||  ||| || || ||||||| ||||||||||||    
T  9724874 atacaaccatgttaaattcaatatcagattcacatactcaagattatttaaggttagtcccacccttacctt 9724803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 11091604 - 11091697
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||| |||||||||  |||||||||||||||||||||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  11091604 tctcagattctaaaacctcaacctacaaccatgttaaattcatcttcataatcacatactcagaattgttgaaggttagtcccacccttacctt 11091697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 46579853 - 46579760
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||| |||  || ||||||||||||    
T  46579853 tctcaaattctaaaatctcaacctacaaccatgttaaattcatcttcagaatcacatactctgaattattgaaggttgttcccacccttacctt 46579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 8135338 - 8135239
Alignment:
Q  126 cctaattctcaaattc-taaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacct 224  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||| | ||| || |||  |||| |||||||||||||||||||    
T  8135338 cctaattctcaaattcctaaaactacaacctacaacc-tgttaaattcaatttcagaatcatacacttaggattagtgaaggttagtctcacccttacct 8135240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 15623970 - 15624069
Alignment:
Q  126 cctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacct 224  Q
    ||||||||||||||||  |||| | ||| |||||||| | ||||||||||||||||||||| | ||| |||||| ||||| |||||||||||||||||||    
T  15623970 cctaattctcaaattcccaaaactacaaactacaacc-tattaaattcaatttcagaatcatacacttagaattattgaaggttagtctcacccttacct 15624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 8469278 - 8469383
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | ||||| |||| ||||| ||||||| |||||    
T  8469278 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtcccaccc 8469376  T
Q  219 ttacctt 225  Q
    |||||||    
T  8469377 ttacctt 8469383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 9945116 - 9945011
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  9945116 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 9945018  T
Q  219 ttacctt 225  Q
    |||||||    
T  9945017 ttacctt 9945011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 23461739 - 23461634
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  23461739 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 23461641  T
Q  219 ttacctt 225  Q
    |||||||    
T  23461640 ttacctt 23461634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 36685249 - 36685147
Alignment:
Q  123 aaccctaattctcaaatt-ctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccctta 221  Q
    ||||||||||| |||||| | |||| | |||||||||||| |||||||| || ||||||||| |||||||||||||| ||||| ||| ||  ||||||||    
T  36685249 aaccctaattcccaaatttccaaaactacaacctacaacc-tgttaaatccagtttcagaattacatactcagaattattgaaggttggttccaccctta 36685151  T
Q  222 cctt 225  Q
    ||||    
T  36685150 cctt 36685147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 5294538 - 5294433
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  5294538 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 5294440  T
Q  219 ttacctt 225  Q
    |||||||    
T  5294439 ttacctt 5294433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 8941210 - 8941315
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  8941210 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 8941308  T
Q  219 ttacctt 225  Q
    |||||||    
T  8941309 ttacctt 8941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 11973091 - 11973196
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  11973091 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 11973189  T
Q  219 ttacctt 225  Q
    |||||||    
T  11973190 ttacctt 11973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 14317617 - 14317517
Alignment:
Q  126 cctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacc 223  Q
    ||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||||||||||||||    
T  14317617 cctaattctcaaattctcaaaaaataaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacc 14317519  T
Q  224 tt 225  Q
    ||    
T  14317518 tt 14317517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 15140157 - 15140264
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    |||||| |||||||| |||||||  |||| | |||||||||||| ||||||||||||||| |||||||| | ||| ||||||  |||| |||||||||||    
T  15140157 ttttaaacctaattcccaaattcccaaaactacaacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtctcac 15140255  T
Q  217 ccttacctt 225  Q
    || ||||||    
T  15140256 ccatacctt 15140264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 11054682 - 11054764
Alignment:
Q  143 aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| | ||| |||||  ||||| ||||||| ||||||||||||    
T  11054682 aaaattacaacctacaacc-tgttaaattcaattttcagaatcaaacacttagaatcattgaaggttagtcccacccttacctt 11054764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 30820226 - 30820152
Alignment:
Q  150 caacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||| |||||||| || ||||||||| ||||||||||||||  |||| ||||||| |||||| |||||    
T  30820226 caacctacaacc-tgttaaatccagtttcagaattacatactcagaattactgaaggttagtcccaccctcacctt 30820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 5295711 - 5295606
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||| | |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  5295711 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 5295613  T
Q  219 ttacctt 225  Q
    |||||||    
T  5295612 ttacctt 5295606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 5296884 - 5296779
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||| | |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  5296884 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 5296786  T
Q  219 ttacctt 225  Q
    |||||||    
T  5296785 ttacctt 5296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 14269190 - 14269085
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||| | ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  14269190 ttaaccctaattctcaaattctcaaaaactaaacctacagc-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 14269092  T
Q  219 ttacctt 225  Q
    |||||||    
T  14269091 ttacctt 14269085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 21189031 - 21188926
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| || || ||||||| |||||    
T  21189031 ttaaccctaattctcaaattctaaaaaactaaacctacaa-catgttaaatacaattttcagaatcatagactcaagattattaaatgttagtcccaccc 21188933  T
Q  219 ttacctt 225  Q
    |||||||    
T  21188932 ttacctt 21188926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27737366 - 27737416
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  27737366 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 27737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31899571 - 31899621
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  31899571 aaaaataaagaaaaggttccaagcgtgagttgaaaagaggtgtttgtgaaa 31899621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 45846871 - 45846766
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||| ||||| | |||||  ||| ||||| ||||||| |||||    
T  45846871 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcaaaatcagagactcaagattattgaatgttagtcccaccc 45846773  T
Q  219 ttacctt 225  Q
    |||||||    
T  45846772 ttacctt 45846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 15095738 - 15095638
Alignment:
Q  126 cctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacc 223  Q
    |||||||| |||||||  |||| | |||||||||||| ||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||||||||||    
T  15095738 cctaattcccaaattcccaaaactacaacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacc 15095640  T
Q  224 tt 225  Q
    ||    
T  15095639 tt 15095638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 26355302 - 26355195
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  | ||||||||| |||||||||| ||| |||| |||||| | |||||  ||| ||||| ||||||| |||    
T  26355302 ttttaaccctaattcccaaattctcaaaaactaaacctacaa-catgttaaatacaattttcggaatcatagactcaagattattgaatgttagtcccac 26355204  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  26355203 ccttacctt 26355195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 26357754 - 26357647
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  | ||||||||| |||||||||| ||| |||| |||||| | |||||  ||| ||||| ||||||| |||    
T  26357754 ttttaaccctaattcccaaattctcaaaaactaaacctacaa-catgttaaatacaattttcggaatcatagactcaagattattgaatgttagtcccac 26357656  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  26357655 ccttacctt 26357647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 688536 - 688486
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| | ||||||||||||||||||||||||    
T  688536 aaaaataaagaaaaggttcccagcgttagttgaaaagaggtgtttgtgaaa 688486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9144495 - 9144445
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    |||| |||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  9144495 aaaactaaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 9144445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11498827 - 11498778
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  11498827 aaaaataaa-aaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 11498778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17169530 - 17169480
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  17169530 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 17169480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 11392623 - 11392517
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  |  |||||||||  |||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||    
T  11392623 ttttaaccctaattcccaaattctcaaaaactatacctacaac--tgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccac 11392526  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  11392525 ccttacctt 11392517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 15081268 - 15081169
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||| ||||||| | |||||  ||| ||||| ||||||| |||||    
T  15081268 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttaagaatcatagactcaagattattgaatgttagtcccaccc 15081170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 27217701 - 27217808
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  | ||||||||| |||||||||| ||| |||||||||||   ||| |  ||| ||||| ||||||| |||    
T  27217701 ttttaaccctaattcccaaattctcaaaaactaaacctacaa-catgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccac 27217799  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  27217800 ccttacctt 27217808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 4110 - 4216
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||| ||||||||||||     
T  4110 ttttaaccctaattctcaaatcctaaaaattcaacctacaaccatgttaaattgaatttcagaatcacatacttagaagtattgaaggttagtctcacct 4209  T
Q  219 ttacctt 225  Q
    |||||||    
T  4210 ttacctt 4216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 2638 - 2472
Alignment:
Q  59 tgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatt-tcaacctac 157  Q
    |||||||| |||||| |  |||||||||  |||| ||||||||||| || |||||   | ||||||||||||||||||||||||||||   | |||||||    
T  2638 tgtacacagtttctacatcaattcaacagttttctatcatctaatc-atcaattcgtcacttttaaccctaattctcaaattctaaaaaacttaacctac 2540  T
Q  158 aaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||||||||||| |||||||||||  ||| ||||| ||||||| ||||||||||||    
T  2539 aaccatgttaaattcaatttcagattcacatactcaagattattgaaggttagtcccacccttacctt 2472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 4031 - 3894
Alignment:
Q  89 tttccatcatctaatcgattaattctctaattttaaccctaat-tctcaaattctaaaatttcaacctacaaccatgttaaattcaa-tttcagaatcac 186  Q
    |||||||||||||||| || |||||   | ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||    
T  4031 tttccatcatctaatc-atcaattcctcacttttaaccctaatctctcaaattctaaaacctcaacctacaaccatgttaaattcaattttcagaattac 3933  T
Q  187 atactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||| |||| ||||| ||||||| | ||||||||||    
T  3932 atactcataattattgaaggttagtccctcccttacctt 3894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 14060 - 13888
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaat-tctcaaattctaaaatttcaa 152  Q
    ||||||||||||| |||||| | ||||||| |   |||||||||||||||| || |||||   | ||||||||||||| ||||||||| |||||  ||||    
T  14060 aggtatgtacacagtttctacattaattcatcggttttccatcatctaatc-atcaattcctcacttttaaccctaatctctcaaattttaaaacctcaa 13962  T
Q  153 cctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| |||| ||||| ||| ||| ||||||||||||    
T  13961 cctacaaccatgttaaattcaatttttagaattacatactcacaattattgaaggttggtcccacccttacctt 13888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 5255 - 5348
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  5255 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattgaaggttagtcccacccttacctt 5348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 12275 - 12368
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  12275 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattgaaggttagtcccacccttacctt 12368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 1896 - 1989
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||| |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  1896 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcataatcacatactcagaattattgaaggttagtcccacccttacctt 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 68255 - 68348
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  68255 tctcaaattctaaaacctcaacctacagccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctt 68348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 11847 - 11936
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccctta 221  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||| ||| | ||||||||||||||||    
T  11847 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattggaggttagtctcaccctta 11936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 7914 - 7864
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatc 104  Q
    |||| |||||||||||| | ||| |||||||||||||||||||||||||||    
T  7914 aggtctgtacacaatttttgtaccaattcaacatgtttccatcatctaatc 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 21995758 - 21995669
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccctta 221  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  21995758 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcaaaattattgaaggttagtcccaccctta 21995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 22350663 - 22350767
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    |||||||||||| |||||||  |||| | |||||||||||  ||||||||||||||| |||||||| |||||||||||| ||||| ||||||| ||||||    
T  22350663 taaccctaattcccaaattcccaaaactacaacctacaact-tgttaaattcaattttcagaatcatatactcagaattattgaaggttagtcccaccct 22350761  T
Q  220 tacctt 225  Q
    ||||||    
T  22350762 tacctt 22350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 21708126 - 21708200
Alignment:
Q  151 aacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  21708126 aacctacaac-atgttaaatccaattttcagaattacatactcagaattattgaaggttagtcccacccttacctt 21708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 21712669 - 21712743
Alignment:
Q  151 aacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  21712669 aacctacaac-atgttaaatccaattttcagaattacatactcagaattattgaaggttagtcccacccttacctt 21712743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 9044624 - 9044519
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||| | |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  9044624 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaagtacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 9044526  T
Q  219 ttacctt 225  Q
    |||||||    
T  9044525 ttacctt 9044519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 16274679 - 16274574
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| || ||||| | |||||  ||| ||||| |||||||||||||    
T  16274679 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtctcaccc 16274581  T
Q  219 ttacctt 225  Q
    |||||||    
T  16274580 ttacctt 16274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 40129627 - 40129732
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    ||||||||||||||| |||||| ||||  | |||||||||| || |||||| |||||| |||||||| | ||||| |||| ||||| |||||||||||||    
T  40129627 ttaaccctaattctctaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaaaattattgaatgttagtctcaccc 40129725  T
Q  219 ttacctt 225  Q
    |||||||    
T  40129726 ttacctt 40129732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10697734 - 10697784
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  10697734 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 10697784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10702623 - 10702673
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  10702623 aaaaataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 10702673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 22050456 - 22050351
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  22050456 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 22050358  T
Q  219 ttacctt 225  Q
    |||||||    
T  22050357 ttacctt 22050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 22122273 - 22122168
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  22122273 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 22122175  T
Q  219 ttacctt 225  Q
    |||||||    
T  22122174 ttacctt 22122168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 41231046 - 41230941
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||| |||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  41231046 ttaaccctaattctcaaattctcaaaaactaaacttacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 41230948  T
Q  219 ttacctt 225  Q
    |||||||    
T  41230947 ttacctt 41230941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 47135203 - 47135156
Alignment:
Q  4 aataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  47135203 aataaagaaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 47135156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 51476981 - 51477044
Alignment:
Q  163 tgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||| |||||||| ||||||| |||| || || ||||||| ||||||||||||    
T  51476981 tgttaaattcaattttcagaatcatatactcaaaattattaaaggttagtcccacccttacctt 51477044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1367787 - 1367737
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  1367787 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 1367737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4890604 - 4890554
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  4890604 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 4890554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17364186 - 17364236
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  17364186 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 17364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29187883 - 29187933
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  29187883 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 29187933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33360206 - 33360156
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||  |||| ||| ||||||||||||||||||||||||||    
T  33360206 aaaaataaagaaaaagttccaagcgtgagttgaaaagaggtgtttgtgaaa 33360156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52306570 - 52306520
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||  | | ||||||||||||||||||||||||||    
T  52306570 aaaaataaagaaaagattcacaacgtgagttgaaaagaggtgtttgtgaaa 52306520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 41832868 - 41832908
Alignment:
Q  11 aaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||| |||| ||| ||||||||||||||||||||||||||    
T  41832868 aaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 41832908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 52524419 - 52524459
Alignment:
Q  11 aaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||| |||| ||| ||||||||||||||||||||||||||    
T  52524419 aaaaggttcccagcgtgagttgaaaagaggtgtttgtgaaa 52524459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 30989 - 31159
Alignment:
Q  54 aggtatgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaattctcaaattctaaaatttcaac 153  Q
    |||| |||||||| ||||||||  |||||||||  |||||||||||||||| |  ||||  | | ||||||||||||||| |||||||  ||| | ||||    
T  30989 aggtttgtacacagtttctatatcaattcaacaaatttccatcatctaatcaac-aatttacaacttttaaccctaattcccaaattcccaaactacaac 31087  T
Q  154 ctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||  |||||||| |||||| |||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  31088 ctacaact-tgttaaatccaattttcagaattacatactcagaattattgaaggttagtcccacccttacctt 31159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 36705 - 36600
Alignment:
Q  121 ttaaccctaattctcaaa-ttctaaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||| || |||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| ||||||| ||| |    
T  36705 ttaaccctaattctcaaatttttaaaaactaaacctacaa-catgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacac 36607  T
Q  219 ttacctt 225  Q
    |||||||    
T  36606 ttacctt 36600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 13595 - 13686
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacc 223  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||| |||||| ||||| |||| || ||||||||||    
T  13595 tctcaaattctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatacttagaattattgaaggttactcccacccttacc 13686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 1339 - 1172
Alignment:
Q  59 tgtacacaatttctatactaattcaacatgtttccatcatctaatcgattaattctctaattttaaccctaat-tctcaaattctaaaattt-caaccta 156  Q
    |||||||| |||||| |  ||||||||   |||||||||||||||| || |||||   | ||||||||||||| | |||||| ||||||  | |||||||    
T  1339 tgtacacagtttctacatcaattcaacggttttccatcatctaatc-atcaattcctcacttttaaccctaatctgtcaaatcctaaaaaatacaaccta 1241  T
Q  157 caaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    || |||||||||||||||||| ||||| ||||||||||| || ||| | |||| || ||||||||||||    
T  1240 cagccatgttaaattcaattttagaattacatactcagagttattgcaggttactcccacccttacctt 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 9008 - 9110
Alignment:
Q  123 aaccctaattctcaaattctaaaattt-caacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcaccctta 221  Q
    ||||||||||| ||||||| ||||  | |||||||||||| |||||||| || ||||||||| ||||||||||||||  |||| ||||||| ||||||||    
T  9008 aaccctaattcccaaattccaaaaactacaacctacaacc-tgttaaatccagtttcagaattacatactcagaattactgaaggttagtcccaccctta 9106  T
Q  222 cctt 225  Q
    ||||    
T  9107 cctt 9110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 1094 - 1199
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  1094 ttaaccctaattctcaaattctcaaaaactcaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 1192  T
Q  219 ttacctt 225  Q
    |||||||    
T  1193 ttacctt 1199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 7520 - 7625
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatt-tcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| ||||| ||||||||| | |||||  ||| ||||| |||||||||||||    
T  7520 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattctcagaatcatagactcaagattattgaatgttagtctcaccc 7618  T
Q  219 ttacctt 225  Q
    |||||||    
T  7619 ttacctt 7625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 6057 - 6162
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | ||||| |||| ||||| ||||||||||||     
T  6057 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtctcacct 6155  T
Q  219 ttacctt 225  Q
    |||||||    
T  6156 ttacctt 6162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 22806 - 22701
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  22806 ttaaccctaattctcaaattctcaaaaactcaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 22708  T
Q  219 ttacctt 225  Q
    |||||||    
T  22707 ttacctt 22701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 20630 - 20527
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||| ||||||| ||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  20630 ttaaccttaattctaaaattctcaaaaactgaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 20532  T
Q  219 ttacc 223  Q
    |||||    
T  20531 ttacc 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 16866 - 16761
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatttc-agaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||| ||||||  ||||||| | |||||  ||| ||||| |||||||||||||    
T  16866 ttaaccctaattctcaaattctcaaaaactcaacctacaac-atgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcaccc 16768  T
Q  219 ttacctt 225  Q
    |||||||    
T  16767 ttacctt 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 1397 - 1489
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||||||  |||||||||||||||||| ||||||  ||||||||||||||||||| ||| || ||  ||| || ||||||||||||    
T  1397 tctcaaattctaaaacctcaacctacaaccatgtt-aattcatcttcagaatcacatactcaggatttttaaagtttaatcccacccttacctt 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 12345 - 12405
Alignment:
Q  126 cctaattctcaaatt-ctaaaatttcaacctacaaccatgttaaattcaatttcagaatca 185  Q
    ||||||||||||||| | |||| | ||||||||||||||||||||||||||||||||||||    
T  12345 cctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaatttcagaatca 12405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5495 - 5545
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  5495 aaaaataaagaaaagattcccagcgtgagttgaaaagaggtgtttgtgaaa 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 7003 - 6898
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  7003 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 6905  T
Q  219 ttacctt 225  Q
    |||||||    
T  6904 ttacctt 6898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 7187 - 7292
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  7187 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 7285  T
Q  219 ttacctt 225  Q
    |||||||    
T  7286 ttacctt 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 142 - 37
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||| | ||||  | |||||||||| ||||||||| |||||| |||||||||| |||||  ||| ||||| ||||||| |||||    
T  142 ttaaccctaattctcaaattttcaaaaactaaacctacaac-atgttaaatacaattttcagaatcacagactcaagattattgaatgttagtcccaccc 44  T
Q  219 ttacctt 225  Q
    |||||||    
T  43 ttacctt 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 34232 - 34337
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  34232 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 34330  T
Q  219 ttacctt 225  Q
    |||||||    
T  34331 ttacctt 34337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 20580 - 20685
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  20580 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 20678  T
Q  219 ttacctt 225  Q
    |||||||    
T  20679 ttacctt 20685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 107211 - 107316
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  107211 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 107309  T
Q  219 ttacctt 225  Q
    |||||||    
T  107310 ttacctt 107316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 21908 - 22013
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| || ||||| | |||||  ||| ||||| |||||||||||||    
T  21908 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcacaatcatagactcaagattattgaatgttagtctcaccc 22006  T
Q  219 ttacctt 225  Q
    |||||||    
T  22007 ttacctt 22013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 185005 - 185110
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  185005 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 185103  T
Q  219 ttacctt 225  Q
    |||||||    
T  185104 ttacctt 185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 118820 - 118756
Alignment:
Q  161 catgttaaattcaatttcagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||  ||||||||| |||||||||||  ||| ||||| ||||||| ||||||||||||    
T  118820 catgttaaatctaatttcagattcacatactcaagattattgaaggttagtcccacccttacctt 118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 158927 - 158823
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaatttc-agaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    |||||||||||| |||||||  |||| | |||||||||||  |||||||| ||||||  ||||||| |||||||||||| ||||| ||||||| ||||||    
T  158927 taaccctaattcccaaattcccaaaactacaacctacaact-tgttaaatccaatttttagaatcatatactcagaattattgaaggttagtcccaccct 158829  T
Q  220 tacctt 225  Q
    ||||||    
T  158828 tacctt 158823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 13384 - 13491
Alignment:
Q  119 ttttaaccctaattctcaaatt-ctaaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||| | |||| |||||||||||| | |||||||||||| ||||||||||| ||||| |||||  || || ||||||| ||     
T  13384 ttttaaccctaattcccaaattcccaaaacttcaacctacaa-cttgttaaattcaattttcagaatcatatactgagaatgattaaaggttagtcacat 13482  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  13483 ccttacctt 13491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 5430 - 5535
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| |||| || |||||    
T  5430 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaatcatagactcaagattattgaatgttattcccaccc 5528  T
Q  219 ttacctt 225  Q
    |||||||    
T  5529 ttacctt 5535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 18673 - 18778
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||| ||||| ||||  | |||||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  18673 ttaaccctaattctcagattctcaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 18771  T
Q  219 ttacctt 225  Q
    |||||||    
T  18772 ttacctt 18778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 6363 - 6258
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | || ||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  6363 ttaaccctaattctcaaattctcaaaaactaaatctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 6265  T
Q  219 ttacctt 225  Q
    || ||||    
T  6264 tttcctt 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 10766 - 10661
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||    || ||||||| ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  10766 ttaaccctaattctcaaattctcaaaaacaaaatctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 10668  T
Q  219 ttacctt 225  Q
    |||||||    
T  10667 ttacctt 10661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 3556 - 3661
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| || |||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||||    
T  3556 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccc 3654  T
Q  219 ttacctt 225  Q
    |||||||    
T  3655 ttacctt 3661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20162 - 20212
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  20162 aaaaataaagaaaaggttccaagcgtgagttgaaaagaggtgtttgtgaaa 20212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 10720 - 10825
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||| ||||||||||||||||| ||||  | |||||||||  ||||||||| |||||| |||||||| | |||||  ||| ||||| |||||||||||||    
T  10720 ttaagcctaattctcaaattctcaaaaactaaacctacaat-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccc 10818  T
Q  219 ttacctt 225  Q
    |||||||    
T  10819 ttacctt 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 43274 - 43169
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaat-ttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | |||||||||| ||||||| | |||| |||||||||| | |||||  ||| ||||| ||||||| |||||    
T  43274 ttaaccctaattctcaaattctcaaaaactaaacctacaac-atgttaagtacaatattcagaatcatagactcaagattattgaatgttagtcccaccc 43176  T
Q  219 ttacctt 225  Q
    |||||||    
T  43175 ttacctt 43169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 28434 - 28330
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    |||||||||||  |||||||  |||| | |||||||||||  |||||||| |||||| |||||||| |||||||||||| ||||| | ||||| ||||||    
T  28434 taaccctaatttccaaattcccaaaactacaacctacaact-tgttaaatccaattttcagaatcatatactcagaattattgaagggtagtcccaccct 28336  T
Q  220 tacctt 225  Q
    ||||||    
T  28335 tacctt 28330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 8618 - 8693
Alignment:
Q  150 caacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    |||||||||||| ||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||||||||||||    
T  8618 caacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctt 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 10694 - 10733
Alignment:
Q  132 tctcaaattctaaaatttcaacctacaaccatgttaaatt 171  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  10694 tctcaaattctaaaacctcaacctacaaccatgttaaatt 10733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 8668 - 8769
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| |||||||||| ||| ||||||||||| | |||||  ||| ||||| ||||||  |||||    
T  8668 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catgttaaatacaattttcagaatcatacactcaagattattgaatgttagttccaccc 8766  T
Q  219 tta 221  Q
    |||    
T  8767 tta 8769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 21590 - 21698
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||||||||||||  |||| |  ||||||||| |||||||||| ||| |||||||||||   ||| |  ||| ||||| ||||||| ||    
T  21590 ttttaaccctaattctcaaattctcaaaaactaaaacctacaa-catgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccca 21688  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  21689 cccttacctt 21698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12273 - 12223
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||| ||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  12273 aaaaaaaaagaaaaggttccaagcgtgagttgaaaagaggtgtttgtgaaa 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 39061 - 38953
Alignment:
Q  119 ttttaaccctaattctcaaattctaaaat--ttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||||||||||||||||   |  |||||||||| ||||||||| |||||| ||||||||   ||| |  ||| ||||| ||||||| ||    
T  39061 ttttaaccctaattctcaaattctaaaaaactaaaacctacaac-atgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccca 38963  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  38962 cccttacctt 38953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 56329 - 56221
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | || ||  ||| ||||| ||||||| ||    
T  56329 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaatacaattttcagaatcatagacccaagattattgaatgttagtccca 56231  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  56230 cccttacctt 56221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 135052 - 135160
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | || ||  ||| ||||| ||||||| ||    
T  135052 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaatacaattttcagaatcatagacccaagattattgaatgttagtccca 135150  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  135151 cccttacctt 135160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 137521 - 137629
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | || ||  ||| ||||| ||||||| ||    
T  137521 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaatacaattttcagaatcatagacccaagattattgaatgttagtccca 137619  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  137620 cccttacctt 137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 139990 - 140098
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | || ||  ||| ||||| ||||||| ||    
T  139990 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaatacaattttcagaatcatagacccaagattattgaatgttagtccca 140088  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  140089 cccttacctt 140098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 142459 - 142567
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | || ||  ||| ||||| ||||||| ||    
T  142459 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaatacaattttcagaatcatagacccaagattattgaatgttagtccca 142557  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  142558 cccttacctt 142567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 144928 - 145036
Alignment:
Q  119 ttttaaccctaattctcaaattct--aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctca 215  Q
    ||||||||||||||| ||||||||  |||| |  ||||||||| |||||||||| ||| ||||||||||| | || ||  ||| ||||| ||||||| ||    
T  144928 ttttaaccctaattcccaaattctcaaaaactaaaacctacaa-catgttaaatacaattttcagaatcatagacccaagattattgaatgttagtccca 145026  T
Q  216 cccttacctt 225  Q
    ||||||||||    
T  145027 cccttacctt 145036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 3157 - 3053
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    ||||||||||||  ||||||  |||| | |||||||||||  ||||||||||||||| |||||| | | ||| |||||| ||||| ||||||| ||||||    
T  3157 taaccctaattcctaaattcccaaaactacaacctacaact-tgttaaattcaattttcagaataatacacttagaattattgaaggttagtcccaccct 3059  T
Q  220 tacctt 225  Q
    ||||||    
T  3058 tacctt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 562 - 667
Alignment:
Q  121 ttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaa-tttcagaatcacatactcagaattgttgaaagttagtctcaccc 218  Q
    |||||||||||||||||||||| ||||  | ||||||||| ||| |||||| ||| ||||||||||| | | ||   ||| ||||| |||||||||||||    
T  562 ttaaccctaattctcaaattctcaaaaactaaacctacaa-catattaaatacaattttcagaatcatagagtcgagattattgaatgttagtctcaccc 660  T
Q  219 ttacctt 225  Q
    |||||||    
T  661 ttacctt 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 225909 - 225859
Alignment:
Q  1 aaaaataaacaaaagattcctagcatgagttgaaaagaggtgtttgtgaaa 51  Q
    ||||||||| ||||| |||  ||||||||||||||| ||||||||||||||    
T  225909 aaaaataaagaaaaggttctcagcatgagttgaaaataggtgtttgtgaaa 225859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 5352 - 5417
Alignment:
Q  161 catgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcacccttacctt 225  Q
    ||||||||||||||||| |||||||| | ||| ||||||  |||| ||||||| ||||||||||||    
T  5352 catgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctt 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 3025 - 2919
Alignment:
Q  119 ttttaaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcac 216  Q
    ||||||||||||||| |||||||| ||||  |  |||||||||  |||||||| |||||| |||||||| | |||||  ||| ||||| ||||||| |||    
T  3025 ttttaaccctaattcccaaattctcaaaaactatacctacaac--tgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccac 2928  T
Q  217 ccttacctt 225  Q
    |||||||||    
T  2927 ccttacctt 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 135609 - 135505
Alignment:
Q  122 taaccctaattctcaaattct-aaaatttcaacctacaaccatgttaaattcaattt-cagaatcacatactcagaattgttgaaagttagtctcaccct 219  Q
    |||| ||||||| |||||||  |||| | |||||||||||| ||||||||||||||| |||||| | | ||| ||||||  |||| ||||||| ||||||    
T  135609 taactctaattcccaaattcccaaaactacaacctacaacc-tgttaaattcaattttcagaattatacacttagaattagtgaaggttagtcccaccct 135511  T
Q  220 tacctt 225  Q
    ||||||    
T  135510 tacctt 135505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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